Miyakogusa Predicted Gene
- Lj0g3v0033019.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0033019.2 Non Chatacterized Hit- tr|I1MNT9|I1MNT9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.08,0,no
description,Armadillo-like helical; SUBFAMILY NOT NAMED,NULL;
GEMIN2,Survival motor neuron intera,CUFF.1455.2
(598 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54385.2 | Symbols: | ARM repeat superfamily protein | chr1:... 541 e-154
AT1G54385.1 | Symbols: | ARM repeat superfamily protein | chr1:... 541 e-154
AT3G03970.2 | Symbols: | ARM repeat superfamily protein | chr3:... 321 1e-87
AT3G03970.3 | Symbols: | ARM repeat superfamily protein | chr3:... 321 1e-87
AT3G03970.1 | Symbols: | ARM repeat superfamily protein | chr3:... 321 1e-87
>AT1G54385.2 | Symbols: | ARM repeat superfamily protein |
chr1:20301289-20303048 REVERSE LENGTH=560
Length = 560
Score = 541 bits (1395), Expect = e-154, Method: Compositional matrix adjust.
Identities = 320/609 (52%), Positives = 410/609 (67%), Gaps = 60/609 (9%)
Query: 1 MGRSLTPVLQRELENLDKDADSRKSAMRALKSYVKDLDYKTIPIFLAQVSETKETGTLSG 60
MG +L P+L++EL NLDKD +SRKSAM+ALKSYVKDLD K IP FLAQV ETKET +LSG
Sbjct: 1 MGLNLNPILRQELANLDKDTESRKSAMKALKSYVKDLDSKAIPGFLAQVFETKETNSLSG 60
Query: 61 EFTISLYEVLARVHGVKIVPLIDSIMQSIVQTLASSAGSFPLQQACSKVVPAVARYGIDP 120
E+TISLYE+LARVHG IVP ID+IM +IV+TLASSAGSFPLQQACSKV+PA+ARYGIDP
Sbjct: 61 EYTISLYEILARVHGPNIVPQIDTIMSTIVKTLASSAGSFPLQQACSKVIPAIARYGIDP 120
Query: 121 TTADEKKRSIIHSICKPXXXXXXXXXXXXXCGAALCLKALVDSDNWRYASDEIVNRVCQN 180
TT ++KKR IIHS+CKP GAALCLKALVDSDNWR+ASDE+VNRVCQN
Sbjct: 121 TTTEDKKRVIIHSLCKPLTDSLLASQESLTSGAALCLKALVDSDNWRFASDEMVNRVCQN 180
Query: 181 VAVALEEKSTQTNSHMGLVMALAKRNALIVEAYARLLIQSGLQILHAGGELLEGNSQKRF 240
V VAL+ S QT+ MGLVM+LAK N LIVEAYARLLI +GL+IL G + EGNSQKR
Sbjct: 181 VVVALDSNSNQTHLQMGLVMSLAKHNPLIVEAYARLLIHTGLRILGFG--VSEGNSQKRL 238
Query: 241 AAIQMVNFLMKCLDPRSIFSEAEQIIEVMELCQSDKMAYVKGAAFEALQSAKRIAIDKKT 300
+A+QM+NFLMKCLDPRSI+SE E II+ ME CQSD+MAYV+GAA+EA+ ++KRIA + ++
Sbjct: 239 SAVQMLNFLMKCLDPRSIYSEVELIIKEMERCQSDQMAYVRGAAYEAMMTSKRIAAELES 298
Query: 301 KCLKSPAAVTGSNFSRRDYTEGGSFYGDGDHSPTSMSPESRTFDFFPGYESLVE-SPFST 359
K K +VTGSNFSRR+ + Y S+SPES+T F GY+S VE SP S
Sbjct: 299 KMEKGCRSVTGSNFSRRNCSSIVPDY--------SLSPESQTLGSFSGYDSPVESSPISH 350
Query: 360 SDPSQNFNYARRSVNRKLWSH-ENGGV---DVKDGLFSKAGQGNGLLGHAVDHEFPNGGG 415
+ S N + RRSVNRKLW ENGGV +KDGLFS+ +G+ + + P
Sbjct: 351 T--SCNSEFDRRSVNRKLWRRDENGGVVDISLKDGLFSRVTKGSTTVSDS--PLVPYDTC 406
Query: 416 DLAEEFDGFLLRSPRRGVSESTSTSPLRSRS-QVNVDTIKIFTTPRKLIHSLQ---DLND 471
+ +EF+GFL+ S R +T+ SP R RS ++N + IF+TPRKLI SLQ D++
Sbjct: 407 ENGDEFEGFLMESLR-----NTTPSPQRQRSRRINAEDFNIFSTPRKLISSLQYPDDVDL 461
Query: 472 ETSDCSENLNKRIRNLSSGNIKWNPACYSKYDKNGIADHVNYDCKENESSCGDVQFQGGP 531
+ SD + + R + G+ K NP K K QF
Sbjct: 462 DHSDIQSPILRGEREKTIGSRK-NP----KLRK---------------------QFPTMV 495
Query: 532 ESVSSTDELLGDADMQSRNDILTVLMEKPIQKAKRKLVCGLSFVIIAM-ATPLLWINSQE 590
E++SST + D ++ ++T +K + + KLV +SFV++A+ AT +L +N +
Sbjct: 496 ETMSSTITVSEDT---AQTQMITGKKKK-KKMSYAKLVIAISFVVVALFATVILMVNQDD 551
Query: 591 E-GHFLVPT 598
+ G++ VPT
Sbjct: 552 DVGYYTVPT 560
>AT1G54385.1 | Symbols: | ARM repeat superfamily protein |
chr1:20301289-20303048 REVERSE LENGTH=560
Length = 560
Score = 541 bits (1395), Expect = e-154, Method: Compositional matrix adjust.
Identities = 320/609 (52%), Positives = 410/609 (67%), Gaps = 60/609 (9%)
Query: 1 MGRSLTPVLQRELENLDKDADSRKSAMRALKSYVKDLDYKTIPIFLAQVSETKETGTLSG 60
MG +L P+L++EL NLDKD +SRKSAM+ALKSYVKDLD K IP FLAQV ETKET +LSG
Sbjct: 1 MGLNLNPILRQELANLDKDTESRKSAMKALKSYVKDLDSKAIPGFLAQVFETKETNSLSG 60
Query: 61 EFTISLYEVLARVHGVKIVPLIDSIMQSIVQTLASSAGSFPLQQACSKVVPAVARYGIDP 120
E+TISLYE+LARVHG IVP ID+IM +IV+TLASSAGSFPLQQACSKV+PA+ARYGIDP
Sbjct: 61 EYTISLYEILARVHGPNIVPQIDTIMSTIVKTLASSAGSFPLQQACSKVIPAIARYGIDP 120
Query: 121 TTADEKKRSIIHSICKPXXXXXXXXXXXXXCGAALCLKALVDSDNWRYASDEIVNRVCQN 180
TT ++KKR IIHS+CKP GAALCLKALVDSDNWR+ASDE+VNRVCQN
Sbjct: 121 TTTEDKKRVIIHSLCKPLTDSLLASQESLTSGAALCLKALVDSDNWRFASDEMVNRVCQN 180
Query: 181 VAVALEEKSTQTNSHMGLVMALAKRNALIVEAYARLLIQSGLQILHAGGELLEGNSQKRF 240
V VAL+ S QT+ MGLVM+LAK N LIVEAYARLLI +GL+IL G + EGNSQKR
Sbjct: 181 VVVALDSNSNQTHLQMGLVMSLAKHNPLIVEAYARLLIHTGLRILGFG--VSEGNSQKRL 238
Query: 241 AAIQMVNFLMKCLDPRSIFSEAEQIIEVMELCQSDKMAYVKGAAFEALQSAKRIAIDKKT 300
+A+QM+NFLMKCLDPRSI+SE E II+ ME CQSD+MAYV+GAA+EA+ ++KRIA + ++
Sbjct: 239 SAVQMLNFLMKCLDPRSIYSEVELIIKEMERCQSDQMAYVRGAAYEAMMTSKRIAAELES 298
Query: 301 KCLKSPAAVTGSNFSRRDYTEGGSFYGDGDHSPTSMSPESRTFDFFPGYESLVE-SPFST 359
K K +VTGSNFSRR+ + Y S+SPES+T F GY+S VE SP S
Sbjct: 299 KMEKGCRSVTGSNFSRRNCSSIVPDY--------SLSPESQTLGSFSGYDSPVESSPISH 350
Query: 360 SDPSQNFNYARRSVNRKLWSH-ENGGV---DVKDGLFSKAGQGNGLLGHAVDHEFPNGGG 415
+ S N + RRSVNRKLW ENGGV +KDGLFS+ +G+ + + P
Sbjct: 351 T--SCNSEFDRRSVNRKLWRRDENGGVVDISLKDGLFSRVTKGSTTVSDS--PLVPYDTC 406
Query: 416 DLAEEFDGFLLRSPRRGVSESTSTSPLRSRS-QVNVDTIKIFTTPRKLIHSLQ---DLND 471
+ +EF+GFL+ S R +T+ SP R RS ++N + IF+TPRKLI SLQ D++
Sbjct: 407 ENGDEFEGFLMESLR-----NTTPSPQRQRSRRINAEDFNIFSTPRKLISSLQYPDDVDL 461
Query: 472 ETSDCSENLNKRIRNLSSGNIKWNPACYSKYDKNGIADHVNYDCKENESSCGDVQFQGGP 531
+ SD + + R + G+ K NP K K QF
Sbjct: 462 DHSDIQSPILRGEREKTIGSRK-NP----KLRK---------------------QFPTMV 495
Query: 532 ESVSSTDELLGDADMQSRNDILTVLMEKPIQKAKRKLVCGLSFVIIAM-ATPLLWINSQE 590
E++SST + D ++ ++T +K + + KLV +SFV++A+ AT +L +N +
Sbjct: 496 ETMSSTITVSEDT---AQTQMITGKKKK-KKMSYAKLVIAISFVVVALFATVILMVNQDD 551
Query: 591 E-GHFLVPT 598
+ G++ VPT
Sbjct: 552 DVGYYTVPT 560
>AT3G03970.2 | Symbols: | ARM repeat superfamily protein |
chr3:1028144-1029891 REVERSE LENGTH=554
Length = 554
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/296 (56%), Positives = 214/296 (72%), Gaps = 5/296 (1%)
Query: 1 MGRSLTPVLQRELENLDKDADSRKSAMRALKSYVKDLDYKTIPIFLAQVSETKETGTLSG 60
MGR+L ++EL NLDKD DS K+AM L+S VKDLD K + +F+AQ+S+ KE G SG
Sbjct: 1 MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60
Query: 61 EFTISLYEVLARVHGVKIVPLIDSIMQSIVQTLASSAGSFPLQQACSKVVPAVARYGIDP 120
+T+SL+E LAR HGVKI P ID IM +I++TL+SS GS +QQACS+ V A+ARYGIDP
Sbjct: 61 GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120
Query: 121 TTADEKKRSIIHSICKPXXXXX--XXXXXXXXCGAALCLKALVDSDNWRYASDEIVNRVC 178
TT ++KK ++IHS+CKP G+ALCLK+LVD DNWR AS E+VN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180
Query: 179 QNVAVALEEKSTQTNSHMGLVMALAKRNALIVEAYARLLIQSGLQILHAGGELLEGNSQK 238
Q++AVALE S++ SHM LVMAL+K N VEAYARL ++SGL+IL G ++EG+SQK
Sbjct: 181 QSLAVALEATSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLG--VVEGDSQK 238
Query: 239 RFAAIQMVNFLMKCLDPRSIFSEAEQIIEVMELCQSDKMAYVKGAAFEALQSAKRI 294
R AIQM+NFLMK L+P+SI SE E I + ME Q D+ YVK AA E ++ A+R+
Sbjct: 239 RLLAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERL 293
>AT3G03970.3 | Symbols: | ARM repeat superfamily protein |
chr3:1028144-1029891 REVERSE LENGTH=554
Length = 554
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/296 (56%), Positives = 214/296 (72%), Gaps = 5/296 (1%)
Query: 1 MGRSLTPVLQRELENLDKDADSRKSAMRALKSYVKDLDYKTIPIFLAQVSETKETGTLSG 60
MGR+L ++EL NLDKD DS K+AM L+S VKDLD K + +F+AQ+S+ KE G SG
Sbjct: 1 MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60
Query: 61 EFTISLYEVLARVHGVKIVPLIDSIMQSIVQTLASSAGSFPLQQACSKVVPAVARYGIDP 120
+T+SL+E LAR HGVKI P ID IM +I++TL+SS GS +QQACS+ V A+ARYGIDP
Sbjct: 61 GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120
Query: 121 TTADEKKRSIIHSICKPXXXXX--XXXXXXXXCGAALCLKALVDSDNWRYASDEIVNRVC 178
TT ++KK ++IHS+CKP G+ALCLK+LVD DNWR AS E+VN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180
Query: 179 QNVAVALEEKSTQTNSHMGLVMALAKRNALIVEAYARLLIQSGLQILHAGGELLEGNSQK 238
Q++AVALE S++ SHM LVMAL+K N VEAYARL ++SGL+IL G ++EG+SQK
Sbjct: 181 QSLAVALEATSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLG--VVEGDSQK 238
Query: 239 RFAAIQMVNFLMKCLDPRSIFSEAEQIIEVMELCQSDKMAYVKGAAFEALQSAKRI 294
R AIQM+NFLMK L+P+SI SE E I + ME Q D+ YVK AA E ++ A+R+
Sbjct: 239 RLLAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERL 293
>AT3G03970.1 | Symbols: | ARM repeat superfamily protein |
chr3:1028144-1029891 REVERSE LENGTH=554
Length = 554
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/296 (56%), Positives = 214/296 (72%), Gaps = 5/296 (1%)
Query: 1 MGRSLTPVLQRELENLDKDADSRKSAMRALKSYVKDLDYKTIPIFLAQVSETKETGTLSG 60
MGR+L ++EL NLDKD DS K+AM L+S VKDLD K + +F+AQ+S+ KE G SG
Sbjct: 1 MGRNLGSAFRQELANLDKDPDSHKTAMSNLRSIVKDLDAKVVHVFVAQLSDVKEIGLESG 60
Query: 61 EFTISLYEVLARVHGVKIVPLIDSIMQSIVQTLASSAGSFPLQQACSKVVPAVARYGIDP 120
+T+SL+E LAR HGVKI P ID IM +I++TL+SS GS +QQACS+ V A+ARYGIDP
Sbjct: 61 GYTVSLFEDLARAHGVKIAPHIDIIMPAIIRTLSSSEGSLRVQQACSRAVAAMARYGIDP 120
Query: 121 TTADEKKRSIIHSICKPXXXXX--XXXXXXXXCGAALCLKALVDSDNWRYASDEIVNRVC 178
TT ++KK ++IHS+CKP G+ALCLK+LVD DNWR AS E+VN VC
Sbjct: 121 TTPEDKKTNVIHSLCKPLSDSLIDSQHQQHLALGSALCLKSLVDCDNWRSASSEMVNNVC 180
Query: 179 QNVAVALEEKSTQTNSHMGLVMALAKRNALIVEAYARLLIQSGLQILHAGGELLEGNSQK 238
Q++AVALE S++ SHM LVMAL+K N VEAYARL ++SGL+IL G ++EG+SQK
Sbjct: 181 QSLAVALEATSSEAKSHMALVMALSKHNPFTVEAYARLFVKSGLRILDLG--VVEGDSQK 238
Query: 239 RFAAIQMVNFLMKCLDPRSIFSEAEQIIEVMELCQSDKMAYVKGAAFEALQSAKRI 294
R AIQM+NFLMK L+P+SI SE E I + ME Q D+ YVK AA E ++ A+R+
Sbjct: 239 RLLAIQMLNFLMKNLNPKSISSELELIYQEMEKYQKDQ-HYVKMAAHETMRQAERL 293