Miyakogusa Predicted Gene
- Lj0g3v0027059.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0027059.1 Non Chatacterized Hit- tr|I1J565|I1J565_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,33.01,5e-19,GNK2,Gnk2-homologous domain; seg,NULL; no
description,NULL; FAMILY NOT NAMED,NULL;
Stress-antifung,G,gene.Ljchr0_pseudomol_20120828.path1.gene2731.1
(210 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G70530.1 | Symbols: CRK3 | cysteine-rich RLK (RECEPTOR-like p... 83 2e-16
AT5G40380.1 | Symbols: CRK42 | cysteine-rich RLK (RECEPTOR-like ... 60 1e-09
AT1G19090.1 | Symbols: RKF2, CRK1 | receptor-like serine/threoni... 58 4e-09
AT4G28670.1 | Symbols: | Protein kinase family protein with dom... 57 7e-09
AT1G70520.1 | Symbols: CRK2 | cysteine-rich RLK (RECEPTOR-like p... 50 2e-06
AT1G56140.1 | Symbols: | Leucine-rich repeat transmembrane prot... 49 2e-06
AT1G56145.2 | Symbols: | Leucine-rich repeat transmembrane prot... 49 3e-06
AT5G10530.1 | Symbols: | Concanavalin A-like lectin protein kin... 49 3e-06
AT1G56145.1 | Symbols: | Leucine-rich repeat transmembrane prot... 49 3e-06
AT5G65600.1 | Symbols: | Concanavalin A-like lectin protein kin... 49 3e-06
AT1G16670.1 | Symbols: | Protein kinase superfamily protein | c... 49 3e-06
AT1G56130.1 | Symbols: | Leucine-rich repeat transmembrane prot... 47 8e-06
>AT1G70530.1 | Symbols: CRK3 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 3 | chr1:26588750-26591379 REVERSE
LENGTH=646
Length = 646
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 8/190 (4%)
Query: 12 TAFTATAQQVLQDLQTATPKITGFFAATKTPVAGGAIYAIAQCADTVTESGCLDCLTVGL 71
T F A ++++++ + GF+A ++ +AQC +T+ SGC++CL+
Sbjct: 155 TVFRDNAAELVKNMSVEAVRNGGFYAGF-VDRHNVTVHGLAQCWETLNRSGCVECLSKAS 213
Query: 72 NNIHSCLPNSDGRAFDAGCFMRYSETSFFADNQTIDITPFLKQXXXXXXXXXXXXXXXXX 131
I SCL N +GR AGC+MR+S F+ N + + T
Sbjct: 214 VRIGSCLVNEEGRVLSAGCYMRFSTQKFY--NNSGNSTSDGNGGHNHLGVILAVTSSVVA 271
Query: 132 XXXXXXXXXFVWLRRYKKPNRHPRGDILGATEL---KGPVTYRYKDLKSATKNFSNDNKL 188
F+ +R+ K R + LG+ + K + + Y++L+ AT FS+ NKL
Sbjct: 272 FVLLVSAAGFLLKKRHAKKQREKKQ--LGSLFMLANKSNLCFSYENLERATDYFSDKNKL 329
Query: 189 GEGGFGDVYK 198
G+GG G VYK
Sbjct: 330 GQGGSGSVYK 339
>AT5G40380.1 | Symbols: CRK42 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 42 | chr5:16152121-16155038 FORWARD
LENGTH=651
Length = 651
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 22 LQDLQTATPKITGFFAATKTPVAGGAIYAIAQCADTVTESGCLDCLTVGLNNIHSCLPNS 81
++D+ + + K+T AT++ + +IYA+ QC D ++ S C C + I CLP+S
Sbjct: 58 VEDMHSLSLKLTTRRFATESLNSTTSIYALIQCHDDLSPSDCQLCYAIARTRIPRCLPSS 117
Query: 82 DGRAFDAGCFMRYSETSFFADNQTID 107
R F GCF+RY ET F D D
Sbjct: 118 SARIFLDGCFLRY-ETYEFYDESVSD 142
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 68/157 (43%), Gaps = 7/157 (4%)
Query: 43 VAG-GAIYAIAQCADTVTESGCLDCLTVGLNNIHSCLPNSDGRAFDAGCFMRYSETSFFA 101
VAG ++A+AQC +++ + C CL + + C+ +GRA + GC++RYS+ F+
Sbjct: 179 VAGENGVHALAQCWESLGKEDCRVCLEKAVKEVKRCVSRREGRAMNTGCYLRYSDHKFYN 238
Query: 102 DNQTIDITPFLKQXXXXXXXXXXXXXXXXXXXXXXXXXXFVWLRRYKKPNRHPRGDILGA 161
+ + +V + + K + R L +
Sbjct: 239 GDGHHKFHVLFNK-----GVIVAIVLTTSAFVMLILLATYVIMTKVSKTKQEKRNLGLVS 293
Query: 162 TELKGPVT-YRYKDLKSATKNFSNDNKLGEGGFGDVY 197
+ T ++Y+ L+ AT FS+ LG+GG G V+
Sbjct: 294 RKFNNSKTKFKYETLEKATDYFSHKKMLGQGGNGTVF 330
>AT1G19090.1 | Symbols: RKF2, CRK1 | receptor-like serine/threonine
kinase 2 | chr1:6590350-6592615 FORWARD LENGTH=600
Length = 600
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 13/187 (6%)
Query: 10 GATAFTATAQQVLQDLQTATPKITGFFAATKTPVAGGAIYAIAQCADTVTESGCLDCLTV 69
G F + L ++ K GF AA+ + A+YA+AQC T+ E+ C +CL
Sbjct: 151 GFGEFWRFLDEALVNVTLKAVKNGGFGAAS--VIKTEAVYALAQCWQTLDENTCRECLVN 208
Query: 70 GLNNIHSCLPNSDGRAFDAGCFMRYSETSFFAD----NQTIDITPFLKQXXXXXXXXXXX 125
+++ +C + RAF GC+++YS FF D D F++
Sbjct: 209 ARSSLRAC-DGHEARAFFTGCYLKYSTHKFFDDAAEHKPDADQRNFIRSSFFPHLSDRDV 267
Query: 126 XXXXXXXXXXXXXXXFVWLRRYKKPNRHPRGDILGATELKGPVTYRYKDLKSATKNFSND 185
Y++ +R + ++ V ++Y+ L+ AT++F +
Sbjct: 268 TRLAIAAISLSILTSLGAFISYRRVSRKRKA------QVPSCVNFKYEMLEKATESFHDS 321
Query: 186 NKLGEGG 192
KLG+GG
Sbjct: 322 MKLGQGG 328
>AT4G28670.1 | Symbols: | Protein kinase family protein with domain
of unknown function (DUF26) | chr4:14151387-14153935
FORWARD LENGTH=625
Length = 625
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 2 ICGNGIANGATAFTATAQQVLQDLQTATPKITGFFAATKTPVAGGAIYAIAQCADTVTES 61
IC + A F ++V + + A P GF A K + +Y + C T+ +
Sbjct: 142 ICASDKEKSA-EFKGLVKEVTKSIVEAAPYSRGFSVA-KMGIRDLTVYGLGVCWRTLNDE 199
Query: 62 GCLDCLTVGLNNIHSCLPNSDGRAFDAGCFMRYSETSFFAD 102
C CL G ++ SCLP+ +G A +AGC++RYS +F+ +
Sbjct: 200 LCKLCLADGALSVTSCLPSKEGFALNAGCYLRYSNYTFYNE 240
>AT1G70520.1 | Symbols: CRK2 | cysteine-rich RLK (RECEPTOR-like
protein kinase) 2 | chr1:26584888-26587334 REVERSE
LENGTH=649
Length = 649
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Query: 1 MICGNGIANGATAFTATAQQVLQDLQTATPKITGFFAATKT--PVAGGAIYAIAQCADTV 58
++CGN T F +Q L++ T G+ A+ + + +A C T+
Sbjct: 145 IVCGNTTRKNKT-FGDAVRQGLRNAVTEASGTGGYARASAKAGESESESAFVLANCWRTL 203
Query: 59 TESGCLDCL-TVGLNNIHSCLPNSDGRAFDAGCFMRYSETSFF 100
+ C CL + + CLP S+GRA GCF+RYS+ F
Sbjct: 204 SPDSCKQCLENASASVVKGCLPWSEGRALHTGCFLRYSDQDFL 246
>AT1G56140.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:21001708-21007725 REVERSE LENGTH=1033
Length = 1033
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 148 KKPNRHPRGDILGATELKGPVTYRYKDLKSATKNFSNDNKLGEGGFGDVYKVK 200
K+ R+ + + + ++K P T+ Y +LKSAT++F NKLGEGGFG VYK K
Sbjct: 660 KRRKRYTDDEEILSMDVK-PYTFTYSELKSATQDFDPSNKLGEGGFGPVYKGK 711
>AT1G56145.2 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:21008225-21013934 REVERSE LENGTH=1039
Length = 1039
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 141 FVWLRRYKKPNRHPRGDILGATELKGPVTYRYKDLKSATKNFSNDNKLGEGGFGDVYKVK 200
+++RR +K R ++L + ++ P T+ Y +L++AT++F NKLGEGGFG V+K K
Sbjct: 649 LLFIRRKRK--RAADEEVLNSLHIR-PYTFSYSELRTATQDFDPSNKLGEGGFGPVFKGK 705
>AT5G10530.1 | Symbols: | Concanavalin A-like lectin protein kinase
family protein | chr5:3324978-3326933 REVERSE LENGTH=651
Length = 651
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 166 GPVTYRYKDLKSATKNFSNDNKLGEGGFGDVYK 198
GP + YKDL SA NF++D KLGEGGFG VY+
Sbjct: 319 GPRKFTYKDLASAANNFADDRKLGEGGFGAVYR 351
>AT1G56145.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:21008225-21013934 REVERSE LENGTH=1012
Length = 1012
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Query: 141 FVWLRRYKKPNRHPRGDILGATELKGPVTYRYKDLKSATKNFSNDNKLGEGGFGDVYKVK 200
+++RR +K R ++L + ++ P T+ Y +L++AT++F NKLGEGGFG V+K K
Sbjct: 649 LLFIRRKRK--RAADEEVLNSLHIR-PYTFSYSELRTATQDFDPSNKLGEGGFGPVFKGK 705
>AT5G65600.1 | Symbols: | Concanavalin A-like lectin protein kinase
family protein | chr5:26216126-26218153 REVERSE
LENGTH=675
Length = 675
Score = 48.5 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 142 VWLRRYKKPNRHPRGDILGATE----LKGPVTYRYKDLKSATKNFSNDNKLGEGGFGDVY 197
VW R+ +K +++ + GP + YKDL SAT FS+ KLGEGGFG VY
Sbjct: 306 VWSRKQRKKKERDIENMISINKDLEREAGPRKFSYKDLVSATNRFSSHRKLGEGGFGAVY 365
Query: 198 KVKRRVLST 206
+ + ++T
Sbjct: 366 EGNLKEINT 374
>AT1G16670.1 | Symbols: | Protein kinase superfamily protein |
chr1:5697846-5699492 FORWARD LENGTH=390
Length = 390
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 143 WLRRYKKPNRHPRGDILGATELKGPVTYRYKDLKSATKNFSNDNKLGEGGFGDVYK 198
WL +++ G+I +K Y+Y++++ AT +FS +NK+GEGGFG VYK
Sbjct: 5 WLSCHRREATEVDGEIAAIDNVK---IYKYREIRQATDDFSAENKIGEGGFGSVYK 57
>AT1G56130.1 | Symbols: | Leucine-rich repeat transmembrane protein
kinase | chr1:20994931-21000887 REVERSE LENGTH=1032
Length = 1032
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 148 KKPNRHPRGDILGATELKGPVTYRYKDLKSATKNFSNDNKLGEGGFGDVYK 198
K+ R+ + L ++K P + Y +LKSAT++F NKLGEGGFG VYK
Sbjct: 661 KRRKRYTDDEELLGMDVK-PYIFTYSELKSATQDFDPSNKLGEGGFGPVYK 710