Miyakogusa Predicted Gene
- Lj0g3v0024499.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0024499.1 Non Chatacterized Hit- tr|K4D3L5|K4D3L5_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,60.82,3e-19,FAMILY NOT NAMED,NULL; seg,NULL;
coiled-coil,NULL,CUFF.1378.1
(97 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60210.2 | Symbols: RIP5 | ROP interactive partner 5 | chr5:2... 98 1e-21
AT5G60210.1 | Symbols: RIP5 | ROP interactive partner 5 | chr5:2... 98 1e-21
AT2G37080.1 | Symbols: RIP3 | ROP interactive partner 3 | chr2:1... 87 3e-18
AT3G53350.1 | Symbols: RIP4 | ROP interactive partner 4 | chr3:1... 55 6e-09
AT3G53350.3 | Symbols: RIP4 | ROP interactive partner 4 | chr3:1... 55 7e-09
AT3G53350.2 | Symbols: RIP4 | ROP interactive partner 4 | chr3:1... 55 7e-09
AT1G78430.1 | Symbols: RIP2 | ROP interactive partner 2 | chr1:2... 45 8e-06
>AT5G60210.2 | Symbols: RIP5 | ROP interactive partner 5 |
chr5:24243529-24245889 REVERSE LENGTH=564
Length = 564
Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
Query: 2 QFDAAQAANSELEAELRRLKMQSDQWRKAAEAAASMLSTGNNGKFVDRTASHDSSYSNSI 61
Q +A QA+NSE+E ELR+LK+QS+QWRKAAEAA +MLS GNNGKF + +S YS I
Sbjct: 480 QLEATQASNSEMETELRKLKVQSNQWRKAAEAATAMLSAGNNGKFAENYNQTNSPYSEDI 539
Query: 62 TSKIDLPYLXXXXXXSPKIKNTNMLKKIGVLWKK 95
++ K KN N+LKKIGVLWKK
Sbjct: 540 DDEL------------TKKKNGNVLKKIGVLWKK 561
>AT5G60210.1 | Symbols: RIP5 | ROP interactive partner 5 |
chr5:24243529-24245889 REVERSE LENGTH=564
Length = 564
Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 63/94 (67%), Gaps = 12/94 (12%)
Query: 2 QFDAAQAANSELEAELRRLKMQSDQWRKAAEAAASMLSTGNNGKFVDRTASHDSSYSNSI 61
Q +A QA+NSE+E ELR+LK+QS+QWRKAAEAA +MLS GNNGKF + +S YS I
Sbjct: 480 QLEATQASNSEMETELRKLKVQSNQWRKAAEAATAMLSAGNNGKFAENYNQTNSPYSEDI 539
Query: 62 TSKIDLPYLXXXXXXSPKIKNTNMLKKIGVLWKK 95
++ K KN N+LKKIGVLWKK
Sbjct: 540 DDEL------------TKKKNGNVLKKIGVLWKK 561
>AT2G37080.1 | Symbols: RIP3 | ROP interactive partner 3 |
chr2:15581565-15584057 REVERSE LENGTH=583
Length = 583
Score = 86.7 bits (213), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 11/104 (10%)
Query: 2 QFDAAQAANSELEAELRRLKMQSDQWRKAAEAAASML-----STGNNGKFVDRTASHDSS 56
Q AAQ N+ELEAELRRLK+Q DQWRKAAEAAA+ML + +NGK+V+RT S +S
Sbjct: 482 QLGAAQVTNTELEAELRRLKVQCDQWRKAAEAAATMLSGGNNNNNSNGKYVERTGSLESP 541
Query: 57 YSNSITSKIDL-PYLXXX--XXXSPKIKNTNMLKKIGVLWKKNH 97
+++ PY+ SPK KN +MLKKIGVL KK+
Sbjct: 542 LRR---RNVNMSPYMGETDDELSSPKKKNGSMLKKIGVLLKKSQ 582
>AT3G53350.1 | Symbols: RIP4 | ROP interactive partner 4 |
chr3:19780190-19781555 REVERSE LENGTH=396
Length = 396
Score = 55.5 bits (132), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 33/93 (35%)
Query: 6 AQAANSE-LEAELRRLKMQSDQWRKAAEAAASMLSTGNNGKFVDRTASHDSSYSNSITSK 64
+ AN+E +EAEL+R+K+Q +QWRKAAE AAS+L NN + +RT S
Sbjct: 335 VETANTEAMEAELKRVKIQCEQWRKAAETAASIL---NNDE--ERTDS------------ 377
Query: 65 IDLPYLXXXXXXSPKIKNTNMLKKIGVLWKKNH 97
I+ + MLKK GVL KKNH
Sbjct: 378 ---------------IETSKMLKKFGVLLKKNH 395
>AT3G53350.3 | Symbols: RIP4 | ROP interactive partner 4 |
chr3:19780190-19781555 REVERSE LENGTH=394
Length = 394
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 33/93 (35%)
Query: 6 AQAANSE-LEAELRRLKMQSDQWRKAAEAAASMLSTGNNGKFVDRTASHDSSYSNSITSK 64
+ AN+E +EAEL+R+K+Q +QWRKAAE AAS+L NN + +RT S
Sbjct: 333 VETANTEAMEAELKRVKIQCEQWRKAAETAASIL---NNDE--ERTDS------------ 375
Query: 65 IDLPYLXXXXXXSPKIKNTNMLKKIGVLWKKNH 97
I+ + MLKK GVL KKNH
Sbjct: 376 ---------------IETSKMLKKFGVLLKKNH 393
>AT3G53350.2 | Symbols: RIP4 | ROP interactive partner 4 |
chr3:19780190-19781555 REVERSE LENGTH=394
Length = 394
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 33/93 (35%)
Query: 6 AQAANSE-LEAELRRLKMQSDQWRKAAEAAASMLSTGNNGKFVDRTASHDSSYSNSITSK 64
+ AN+E +EAEL+R+K+Q +QWRKAAE AAS+L NN + +RT S
Sbjct: 333 VETANTEAMEAELKRVKIQCEQWRKAAETAASIL---NNDE--ERTDS------------ 375
Query: 65 IDLPYLXXXXXXSPKIKNTNMLKKIGVLWKKNH 97
I+ + MLKK GVL KKNH
Sbjct: 376 ---------------IETSKMLKKFGVLLKKNH 393
>AT1G78430.1 | Symbols: RIP2 | ROP interactive partner 2 |
chr1:29509605-29510679 FORWARD LENGTH=324
Length = 324
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 2 QFDAAQAANSELEAELRRLKMQSDQWRKAAEAAASMLSTG--NNGKFVDRTASHDSSYSN 59
+ ++ + A LEAE+++LK+Q++QWRKAA+AAA++LS G NG+F ++ S + ++
Sbjct: 228 KLESVEEAKETLEAEMKKLKVQTEQWRKAADAAAAVLSGGVEMNGRFSEQCGSMEKHFAG 287
Query: 60 SITSKIDLPYLXXXXXXSPKIKNTNMLKKIGVLWKK 95
+ P + + ++ K G LWKK
Sbjct: 288 RF---VGSPGMADDSDDGSGKRKSSGKKMFGDLWKK 320