Miyakogusa Predicted Gene

Lj0g3v0023849.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0023849.1 tr|I3SUT5|I3SUT5_LOTJA Triosephosphate isomerase
OS=Lotus japonicus PE=2 SV=1,88.05,0,TRIOSEPHOSPHATE
ISOMERASE,Triosephosphate isomerase; no description,Aldolase-type TIM
barrel; Triose,CUFF.1367.1
         (253 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G55440.1 | Symbols: ATCTIMC, TPI, CYTOTPI | triosephosphate i...   352   1e-97
AT2G21170.1 | Symbols: TIM, PDTPI | triosephosphate isomerase | ...   258   4e-69
AT2G21170.2 | Symbols: TIM, PDTPI | triosephosphate isomerase | ...   233   9e-62

>AT3G55440.1 | Symbols: ATCTIMC, TPI, CYTOTPI | triosephosphate
           isomerase | chr3:20553794-20556078 FORWARD LENGTH=254
          Length = 254

 Score =  352 bits (903), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 172/253 (67%), Positives = 197/253 (77%)

Query: 1   MGRKFFIGGNWKCNGTTEEAKKIVGTLNEANVPGEDIXXXXXXXXXXXXXXXKALLHSNF 60
           M RKFF+GGNWKCNGT EE KKIV TLNEA VP +D+               K+ L S+F
Sbjct: 1   MARKFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDF 60

Query: 61  HVAAQNCWVHKGGAYTGEVSAEMLVNLDIPWVILGPXXXXXXXXXXNEFVGDKVAYALSQ 120
            VAAQNCWV KGGA+TGEVSAEMLVNLDIPWVILG           +EFVGDKVAYAL+Q
Sbjct: 61  FVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQ 120

Query: 121 GLKVIACIGETLEQREAGTTLAVVAEQTKAIAAKIPDWDNVVLAYEPIWAIGTGKAATPA 180
           GLKVIAC+GETLE+REAG+T+ VVA QTKAIA ++ +W NVV+AYEP+WAIGTGK A+PA
Sbjct: 121 GLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTNWSNVVIAYEPVWAIGTGKVASPA 180

Query: 181 QAQEVHADLRKWIHDNVSAEVAVTVRLIYGGSVNGTNSKELAAQPDIDGFLVGRASLKLE 240
           QAQEVH +LRKW+  NVSA+VA T R+IYGGSVNG N KEL  Q D+DGFLVG ASLK E
Sbjct: 181 QAQEVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNCKELGGQADVDGFLVGGASLKPE 240

Query: 241 FVDIINAATVKKN 253
           F+DII AA VKK+
Sbjct: 241 FIDIIKAAEVKKS 253


>AT2G21170.1 | Symbols: TIM, PDTPI | triosephosphate isomerase |
           chr2:9071047-9073106 REVERSE LENGTH=315
          Length = 315

 Score =  258 bits (658), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 133/250 (53%), Positives = 160/250 (64%), Gaps = 3/250 (1%)

Query: 4   KFFIGGNWKCNGTTEEAKKIVGTLNEANVPGEDIXXXXXXXXXXXXXXXKALLHSNFHVA 63
           KFF+GGNWKCNGT +   K++  LN A +  +                 K+ L     ++
Sbjct: 65  KFFVGGNWKCNGTKDSIAKLISDLNSATLEAD--VDVVVSPPFVYIDQVKSSLTDRIDIS 122

Query: 64  AQNCWVHKGGAYTGEVSAEMLVNLDIPWVILGPXXXXXXXXXXNEFVGDKVAYALSQGLK 123
            QN WV KGGA+TGE+S E L +L   WVILG           +EF+G K AYALS+GL 
Sbjct: 123 GQNSWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLG 182

Query: 124 VIACIGETLEQREAGTTLAVVAEQTKAIAAKIPDWDNVVLAYEPIWAIGTGKAATPAQAQ 183
           VIACIGE LE+REAG T  V   Q KA A  +P WDN+V+AYEP+WAIGTGK A+P QAQ
Sbjct: 183 VIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQAQ 242

Query: 184 EVHADLRKWIHDNVSAEVAVTVRLIYGGSVNGTNSKELAAQPDIDGFLVGRASLK-LEFV 242
           EVH  +R W+  NVS EVA   R+IYGGSVNG NS ELA + DIDGFLVG ASLK  EF 
Sbjct: 243 EVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFA 302

Query: 243 DIINAATVKK 252
            I+N+ T KK
Sbjct: 303 TIVNSVTSKK 312


>AT2G21170.2 | Symbols: TIM, PDTPI | triosephosphate isomerase |
           chr2:9071047-9073106 REVERSE LENGTH=306
          Length = 306

 Score =  233 bits (594), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 124/240 (51%), Positives = 150/240 (62%), Gaps = 3/240 (1%)

Query: 14  NGTTEEAKKIVGTLNEANVPGEDIXXXXXXXXXXXXXXXKALLHSNFHVAAQNCWVHKGG 73
           NGT +   K++  LN A +  +                 K+ L     ++ QN WV KGG
Sbjct: 66  NGTKDSIAKLISDLNSATLEAD--VDVVVSPPFVYIDQVKSSLTDRIDISGQNSWVGKGG 123

Query: 74  AYTGEVSAEMLVNLDIPWVILGPXXXXXXXXXXNEFVGDKVAYALSQGLKVIACIGETLE 133
           A+TGE+S E L +L   WVILG           +EF+G K AYALS+GL VIACIGE LE
Sbjct: 124 AFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIACIGEKLE 183

Query: 134 QREAGTTLAVVAEQTKAIAAKIPDWDNVVLAYEPIWAIGTGKAATPAQAQEVHADLRKWI 193
           +REAG T  V   Q KA A  +P WDN+V+AYEP+WAIGTGK A+P QAQEVH  +R W+
Sbjct: 184 EREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWL 243

Query: 194 HDNVSAEVAVTVRLIYGGSVNGTNSKELAAQPDIDGFLVGRASLK-LEFVDIINAATVKK 252
             NVS EVA   R+IYGGSVNG NS ELA + DIDGFLVG ASLK  EF  I+N+ T KK
Sbjct: 244 KKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGPEFATIVNSVTSKK 303