Miyakogusa Predicted Gene

Lj0g3v0023589.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0023589.1 tr|G7IG53|G7IG53_MEDTR Zn/Cd P(IB)-type ATPase
OS=Medicago truncatula GN=MTR_2g036380 PE=3
SV=1,88.15,0,ATPase_P-type: HAD ATPase, P-type, family IC,ATPase,
P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; A,CUFF.1323.1
         (135 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 | chr...   152   6e-38
AT2G19110.1 | Symbols: HMA4, ATHMA4 | heavy metal atpase 4 | chr...   151   1e-37
AT4G30120.1 | Symbols: HMA3, ATHMA3 | heavy metal atpase 3 | chr...   145   1e-35
AT4G33520.2 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:1611...    74   3e-14
AT4G33520.3 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 | chr4:1611...    74   3e-14
AT5G44790.1 | Symbols: RAN1, HMA7 | copper-exporting ATPase / re...    73   6e-14
AT5G21930.2 | Symbols: PAA2, HMA8 | P-type ATPase of Arabidopsis...    64   4e-11
AT5G21930.1 | Symbols: PAA2, HMA8, ATHMA8 | P-type ATPase of Ara...    64   4e-11
AT5G21930.3 | Symbols: PAA2 | P-type ATPase of Arabidopsis 2 | c...    64   4e-11
AT1G63440.1 | Symbols: HMA5 | heavy metal atpase 5 | chr1:235276...    63   7e-11
AT4G37270.1 | Symbols: HMA1, ATHMA1 | heavy metal atpase 1 | chr...    48   2e-06

>AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 |
           chr4:14720253-14724577 REVERSE LENGTH=951
          Length = 951

 Score =  152 bits (384), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 79/136 (58%), Positives = 95/136 (69%), Gaps = 1/136 (0%)

Query: 1   MSKLVEEASIRKSRAQRFIDNFSNYYIXXXXXXXXXXXXXXXXXGVPDIEPWFHQAIVVL 60
           M+KLVEEA   K+  QRFID  S YY                   V +++ W H A+VVL
Sbjct: 284 MAKLVEEAQNSKTETQRFIDKCSKYYTPAIILISICFVAIPFALKVHNLKHWVHLALVVL 343

Query: 61  LSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITRGEFSV 120
           +S CPC LILSTPVA FCALTKAA SGLL+KG DYLETL++IK VAFDKTGTITRGEF V
Sbjct: 344 VSACPCGLILSTPVATFCALTKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIV 403

Query: 121 TDFCAV-DDISIETLL 135
            DF ++ +DIS+++LL
Sbjct: 404 MDFQSLSEDISLQSLL 419


>AT2G19110.1 | Symbols: HMA4, ATHMA4 | heavy metal atpase 4 |
           chr2:8279478-8286255 FORWARD LENGTH=1172
          Length = 1172

 Score =  151 bits (381), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 78/136 (57%), Positives = 95/136 (69%), Gaps = 1/136 (0%)

Query: 1   MSKLVEEASIRKSRAQRFIDNFSNYYIXXXXXXXXXXXXXXXXXGVPDIEPWFHQAIVVL 60
           M+KLVEEA   K+++QR ID  S YY                   V +++ WFH A+VVL
Sbjct: 294 MAKLVEEAQSSKTKSQRLIDKCSQYYTPAIILVSACVAIVPVIMKVHNLKHWFHLALVVL 353

Query: 61  LSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITRGEFSV 120
           +SGCPC LILSTPVA FCALTKAA SGLL+K  DYL+TLS+IK VAFDKTGTITRGEF V
Sbjct: 354 VSGCPCGLILSTPVATFCALTKAATSGLLIKSADYLDTLSKIKIVAFDKTGTITRGEFIV 413

Query: 121 TDFCAVD-DISIETLL 135
            DF ++  DI++ +LL
Sbjct: 414 IDFKSLSRDINLRSLL 429


>AT4G30120.1 | Symbols: HMA3, ATHMA3 | heavy metal atpase 3 |
           chr4:14731131-14733502 REVERSE LENGTH=542
          Length = 542

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 72/123 (58%), Positives = 84/123 (68%)

Query: 1   MSKLVEEASIRKSRAQRFIDNFSNYYIXXXXXXXXXXXXXXXXXGVPDIEPWFHQAIVVL 60
           M+KLVEEA   +++ QRFID  S YY                   V D+  WFH A+VVL
Sbjct: 290 MTKLVEEAQKSQTKTQRFIDKCSRYYTPAVVVSAACFAVIPVLLKVQDLSHWFHLALVVL 349

Query: 61  LSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITRGEFSV 120
           +SGCPC LILSTPVA FCALTKAA SG L+K GD LETL++IK VAFDKTGTIT+ EF V
Sbjct: 350 VSGCPCGLILSTPVATFCALTKAATSGFLIKTGDCLETLAKIKIVAFDKTGTITKAEFMV 409

Query: 121 TDF 123
           +DF
Sbjct: 410 SDF 412


>AT4G33520.2 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 |
           chr4:16118993-16125849 FORWARD LENGTH=949
          Length = 949

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 10/130 (7%)

Query: 3   KLVEEASIRKSRAQRFIDNFSNYYIXXXXXXXXXXXXXXXXXGVPDIEPWFHQ------- 55
           +LVEEA  R++  Q+ +D  +  +                  G   +    H        
Sbjct: 483 RLVEEAQSREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLA 542

Query: 56  ---AIVVLLSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGT 112
              +  VL+  CPCAL L+TP A+    +  A  GLLL+GGD LE  S + TV FDKTGT
Sbjct: 543 LQLSCSVLVVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGT 602

Query: 113 ITRGEFSVTD 122
           +T+G   VT+
Sbjct: 603 LTKGHPVVTE 612


>AT4G33520.3 | Symbols: PAA1, HMA6 | P-type ATP-ase 1 |
           chr4:16118993-16125849 FORWARD LENGTH=949
          Length = 949

 Score = 73.6 bits (179), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 10/130 (7%)

Query: 3   KLVEEASIRKSRAQRFIDNFSNYYIXXXXXXXXXXXXXXXXXGVPDIEPWFHQ------- 55
           +LVEEA  R++  Q+ +D  +  +                  G   +    H        
Sbjct: 483 RLVEEAQSREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSALHNGSPMSLA 542

Query: 56  ---AIVVLLSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGT 112
              +  VL+  CPCAL L+TP A+    +  A  GLLL+GGD LE  S + TV FDKTGT
Sbjct: 543 LQLSCSVLVVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGT 602

Query: 113 ITRGEFSVTD 122
           +T+G   VT+
Sbjct: 603 LTKGHPVVTE 612


>AT5G44790.1 | Symbols: RAN1, HMA7 | copper-exporting ATPase /
           responsive-to-antagonist 1 / copper-transporting ATPase
           (RAN1) | chr5:18075846-18079817 REVERSE LENGTH=1001
          Length = 1001

 Score = 72.8 bits (177), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 13/131 (9%)

Query: 4   LVEEASIRKSRAQRFIDNFSNYYIXXXXXXXXXXXXXXXXXGVPDIEP--WFHQ------ 55
           LVE A + K+  Q+F D  ++ ++                 G     P  W  +      
Sbjct: 541 LVETAQMSKAPIQKFADYVASIFVPVVITLALFTLVGWSIGGAVGAYPDEWLPENGTHFV 600

Query: 56  -----AIVVLLSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKT 110
                +I V++  CPCAL L+TP AV  A    A +G+L+KGGD LE   ++K V FDKT
Sbjct: 601 FSLMFSISVVVIACPCALGLATPTAVMVATGVGATNGVLIKGGDALEKAHKVKYVIFDKT 660

Query: 111 GTITRGEFSVT 121
           GT+T+G+ +VT
Sbjct: 661 GTLTQGKATVT 671


>AT5G21930.2 | Symbols: PAA2, HMA8 | P-type ATPase of Arabidopsis 2
           | chr5:7243129-7248721 FORWARD LENGTH=883
          Length = 883

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 40/61 (65%)

Query: 56  AIVVLLSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITR 115
           A+ VL+  CPCAL L+TP A+    +  A  G L++GGD LE L+ I  VA DKTGT+T 
Sbjct: 496 AVDVLVVSCPCALGLATPTAILIGTSLGAKRGYLIRGGDVLERLASIDCVALDKTGTLTE 555

Query: 116 G 116
           G
Sbjct: 556 G 556


>AT5G21930.1 | Symbols: PAA2, HMA8, ATHMA8 | P-type ATPase of
           Arabidopsis 2 | chr5:7243129-7248721 FORWARD LENGTH=883
          Length = 883

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 40/61 (65%)

Query: 56  AIVVLLSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITR 115
           A+ VL+  CPCAL L+TP A+    +  A  G L++GGD LE L+ I  VA DKTGT+T 
Sbjct: 496 AVDVLVVSCPCALGLATPTAILIGTSLGAKRGYLIRGGDVLERLASIDCVALDKTGTLTE 555

Query: 116 G 116
           G
Sbjct: 556 G 556


>AT5G21930.3 | Symbols: PAA2 | P-type ATPase of Arabidopsis 2 |
           chr5:7243129-7248721 FORWARD LENGTH=860
          Length = 860

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/61 (50%), Positives = 40/61 (65%)

Query: 56  AIVVLLSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITR 115
           A+ VL+  CPCAL L+TP A+    +  A  G L++GGD LE L+ I  VA DKTGT+T 
Sbjct: 473 AVDVLVVSCPCALGLATPTAILIGTSLGAKRGYLIRGGDVLERLASIDCVALDKTGTLTE 532

Query: 116 G 116
           G
Sbjct: 533 G 533


>AT1G63440.1 | Symbols: HMA5 | heavy metal atpase 5 |
           chr1:23527655-23531109 FORWARD LENGTH=995
          Length = 995

 Score = 62.8 bits (151), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 13/128 (10%)

Query: 3   KLVEEASIRKSRAQRFIDNFSNYYIXXXXXXXXXXXXXXXXXG---------VPDIEPWF 53
           +LVE A + K+  Q+  D  S +++                 G         +P     F
Sbjct: 543 RLVESAQLAKAPVQKLADRISKFFVPLVIFLSFSTWLAWFLAGKLHWYPESWIPSSMDSF 602

Query: 54  HQA----IVVLLSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDK 109
             A    I V++  CPCAL L+TP AV       A  G+L+KGG  LE   ++  + FDK
Sbjct: 603 ELALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALERAHKVNCIVFDK 662

Query: 110 TGTITRGE 117
           TGT+T G+
Sbjct: 663 TGTLTMGK 670


>AT4G37270.1 | Symbols: HMA1, ATHMA1 | heavy metal atpase 1 |
           chr4:17541987-17546352 REVERSE LENGTH=819
          Length = 819

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 17/118 (14%)

Query: 3   KLVEEASIRKSRAQRFIDNFSNYYIXXXXXXXXXXXXXXXXXGVPDIEPW---------- 52
           +L EEA   K + QR++D F   Y                    P +  W          
Sbjct: 343 QLTEEAHSNKPKLQRWLDEFGENYSKVVVVLSLAIAFLG-----PFLFKWPFLSTAACRG 397

Query: 53  -FHQAIVVLLSGCPCALILSTPVAVFCALTKAAISGLLLKGGDYLETLSRIKTVAFDK 109
             ++A+ ++++  PCAL ++ P+A   A++  A  G+LLKG   L+ L+   T+AFDK
Sbjct: 398 SVYRALGLMVAASPCALAVA-PLAYATAISSCARKGILLKGAQVLDALASCHTIAFDK 454