Miyakogusa Predicted Gene
- Lj0g3v0023469.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0023469.1 Non Chatacterized Hit- tr|I1K5E0|I1K5E0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,29.11,1e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR_3,Pentatricopeptide repeat; PENTAT,CUFF.1303.1
(459 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 437 e-123
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 367 e-101
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 344 9e-95
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 2e-94
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 327 1e-89
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 325 6e-89
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 2e-87
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 317 1e-86
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 5e-86
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 311 4e-85
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 5e-85
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 306 2e-83
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 3e-83
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 304 8e-83
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 9e-83
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 3e-82
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 7e-82
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 300 2e-81
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 4e-81
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 3e-80
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 294 1e-79
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 291 5e-79
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 6e-79
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 291 8e-79
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 291 9e-79
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 290 1e-78
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 289 3e-78
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 4e-78
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 5e-78
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 287 1e-77
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 287 1e-77
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 287 1e-77
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 4e-77
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 4e-77
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 285 6e-77
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 9e-77
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 284 1e-76
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 284 1e-76
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 283 3e-76
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 4e-76
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 6e-76
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 9e-76
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 2e-75
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 279 3e-75
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 4e-75
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 4e-75
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 4e-75
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 8e-75
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 275 5e-74
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 273 2e-73
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 3e-73
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 4e-73
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 4e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 5e-73
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 9e-73
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 2e-72
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 2e-72
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 5e-72
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 4e-71
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 4e-71
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 1e-70
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 1e-70
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 263 2e-70
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 3e-70
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 3e-70
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 262 5e-70
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 1e-69
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 259 2e-69
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 259 2e-69
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 6e-69
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 2e-68
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 256 3e-68
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 255 5e-68
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 7e-68
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 8e-68
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 1e-67
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 253 2e-67
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 252 5e-67
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 6e-67
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 7e-67
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 2e-66
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 9e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 1e-65
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 7e-65
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 244 1e-64
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 244 1e-64
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 243 2e-64
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 4e-64
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 7e-64
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 8e-64
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 1e-63
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 239 3e-63
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 5e-63
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 4e-62
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 6e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 9e-62
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 9e-62
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 1e-61
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 5e-61
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 6e-61
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 229 4e-60
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 5e-60
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 7e-60
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 7e-60
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 9e-60
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 2e-59
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 8e-59
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 2e-58
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 3e-58
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 6e-58
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 8e-58
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 219 3e-57
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 2e-56
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 216 3e-56
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 6e-55
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 209 5e-54
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 5e-54
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 7e-54
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 9e-53
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 5e-52
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 201 1e-51
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 7e-50
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 5e-49
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 7e-49
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 7e-48
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 6e-45
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 8e-36
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 131 8e-31
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 128 8e-30
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 124 9e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 123 3e-28
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 122 4e-28
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 8e-27
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 6e-26
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 1e-25
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 3e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 107 1e-23
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 107 2e-23
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 5e-23
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 105 6e-23
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 102 4e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 102 5e-22
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 5e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 5e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 102 6e-22
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 100 2e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 99 4e-21
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 99 4e-21
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 6e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 7e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 92 6e-19
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 8e-19
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 3e-18
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 6e-17
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 84 1e-16
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 81 1e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 81 1e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 79 6e-15
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 79 9e-15
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 79 9e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 9e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 77 3e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 74 3e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 70 4e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 68 1e-11
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 62 6e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 62 7e-10
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 3e-09
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 60 5e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 55 8e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 52 1e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 6e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 437 bits (1123), Expect = e-123, Method: Compositional matrix adjust.
Identities = 201/347 (57%), Positives = 268/347 (77%), Gaps = 1/347 (0%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+ +VV+WT M+TG+AK +L+ AR YFD+MPE+SVVSWNAMLSGYAQ+G + +RLFN
Sbjct: 194 PENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFN 253
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
DML G P+ETTWV VIS+CS DP L S+V+ +D+ + N FVKTALLDMHAKC
Sbjct: 254 DMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
++++A+ IF++LG RN V+ NAMIS Y R+GD+S AR LF+ MP+R+ VSWNS+IAGYA
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
NG++ +AI+ F++MI DSKPDE+TM+SV SACGH+ L LG V + + QIKL+
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLND 433
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
GY SLIFMY+R G++ EA +F EM RD+VSYNTL + A++G G+E + L+SKMK++
Sbjct: 434 SGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDE 493
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDML 351
GIEPDR+TY +LTAC+ AGLL+EGQ++F+SI+ P DHYACM D+L
Sbjct: 494 GIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYACM-DLL 539
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 193/422 (45%), Gaps = 76/422 (18%)
Query: 29 RIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSL 88
R+ FD + +V N+M +++ A + +RL+ G PD ++ VI S
Sbjct: 60 RLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF 119
Query: 89 GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAM 148
G L +++V KL F + +V+ ++DM+ K ++++A+++FDQ+ R N M
Sbjct: 120 G--ILFQALVEKL---GFFKDPYVRNVIMDMYVKHESVESARKVFDQIS-QRKGSDWNVM 173
Query: 149 ISAYARLGDLSFARDLFNKMPERD-------------------------------TVSWN 177
IS Y + G+ A LF+ MPE D VSWN
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWN 233
Query: 178 SMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE 237
+M++GYAQNG + A++LF +M+ +P+E T V V SAC SL V +++E
Sbjct: 234 AMLSGYAQNGFTEDALRLFNDMLRLG-VRPNETTWVIVISACSFRADPSLTRSLVKLIDE 292
Query: 238 YQIKL--------------------------------SILGYNSLIFMYSRCGSMEEATL 265
+++L +++ +N++I Y+R G M A
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG-IEPDRITYIGILTACSHAG 324
+F M R++VS+N+LI+G A +G I+ M + G +PD +T I +L+AC H
Sbjct: 353 LFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMA 412
Query: 325 LLEEGQKVFESIKVPDV----DHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLL 380
LE G + + I+ + Y +I M R G L EA ++ M E Y +L
Sbjct: 413 DLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK-ERDVVSYNTLF 471
Query: 381 NA 382
A
Sbjct: 472 TA 473
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 367 bits (941), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/466 (42%), Positives = 286/466 (61%), Gaps = 18/466 (3%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V + +V Y+K GN+ A+ FD+M +R+VVSWN++++ + Q+G A+E + +F ML
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESI---VRKLDKVKFHSNYFVKTALLDMHAKCG 124
S EPDE T +VIS+C+SL + + + V K DK++ ++ + A +DM+AKC
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLR--NDIILSNAFVDMYAKCS 303
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+K A+ IFD + + RN ++ +MIS YA AR +F KM ER+ VSWN++IAGY
Sbjct: 304 RIKEARFIFDSMPI-RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYT 362
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS- 243
QNGE+ A+ LF ++ P + ++ AC L L LG+ A + ++ K
Sbjct: 363 QNGENEEALSLFC-LLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQS 421
Query: 244 -----ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
I NSLI MY +CG +EE L+F++M RD VS+N +I G A +G+G E ++L
Sbjct: 422 GEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELF 481
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGR 353
+M E G +PD IT IG+L+AC HAG +EEG+ F S+ P DHY CM+D+LGR
Sbjct: 482 REMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGR 541
Query: 354 VGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLL 413
G LEEA +I MPM+P + I+GSLL A ++H+ + LG+ A KL VEP NS YVLL
Sbjct: 542 AGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLL 601
Query: 414 SNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVHCETIK 459
SN+YA G+W++V NVR MRK+GV K SW++ H H +K
Sbjct: 602 SNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVK 647
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 198/385 (51%), Gaps = 35/385 (9%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
PQRN+ TW ++VTG K G L A F MPER +WN+M+SG+AQ E + F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M G +E ++ +V+S+CS L D + + K F S+ ++ +AL+DM++KCG
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMI 180
N+ AQ +FD++G RN VS N++I+ + + G A D+F M E D V+ S+I
Sbjct: 202 NVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVI 260
Query: 181 AGYAQNGESLMAIKLFKEM---ISTNDSKPDELTM----VSVFSACGHLGSLSLGIWAVS 233
+ A SL AIK+ +E+ + ND +++ + V +++ C + ++
Sbjct: 261 SACA----SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 234 ILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIE 293
I N ++ S+I Y+ S + A L+F +MA R++VS+N LI+G +G E
Sbjct: 317 IRN-------VIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 294 CIKLISKMKEDGIEPDRITYIGILTAC-----------SHAGLLEEGQKVFESIKVPDVD 342
+ L +K + + P ++ IL AC +H +L+ G K F+S + D+
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK-FQSGEEDDIF 428
Query: 343 HYACMIDMLGRVGKLEEAMKLIHSM 367
+IDM + G +EE + M
Sbjct: 429 VGNSLIDMYVKCGCVEEGYLVFRKM 453
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 154/272 (56%), Gaps = 7/272 (2%)
Query: 103 KVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFAR 162
K F + F++ L+D ++KCG+L+ +++FD++ RN + N++++ +LG L A
Sbjct: 48 KSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP-QRNIYTWNSVVTGLTKLGFLDEAD 106
Query: 163 DLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHL 222
LF MPERD +WNSM++G+AQ+ A+ F M+ +E + SV SAC L
Sbjct: 107 SLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA-MMHKEGFVLNEYSFASVLSACSGL 165
Query: 223 GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLI 282
++ G+ S++ + + ++L+ MYS+CG++ +A +F EM R++VS+N+LI
Sbjct: 166 NDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLI 225
Query: 283 SGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQ----KVFESIKV 338
+ +G +E + + M E +EPD +T +++AC+ ++ GQ +V ++ K+
Sbjct: 226 TCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL 285
Query: 339 P-DVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
D+ +DM + +++EA + SMP+
Sbjct: 286 RNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 344 bits (882), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 178/445 (40%), Positives = 269/445 (60%), Gaps = 8/445 (1%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
+A G+++ AR FD+ P R +VSWN +++GY + G A + + ++ M S G +PD+ T
Sbjct: 201 FASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
+ ++SSCS LGD + + + + AL+DM +KCG++ A+ IFD L
Sbjct: 261 IGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE- 319
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
R VS MIS YAR G L +R LF+ M E+D V WN+MI G Q A+ LF+E
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCG 258
M T+++KPDE+TM+ SAC LG+L +GIW + +Y + L++ SL+ MY++CG
Sbjct: 380 M-QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 259 SMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILT 318
++ EA +F + TR+ ++Y +I GLA HG I ++M + GI PD IT+IG+L+
Sbjct: 439 NISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLS 498
Query: 319 ACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHA 373
AC H G+++ G+ F +K P + HY+ M+D+LGR G LEEA +L+ SMPME A
Sbjct: 499 ACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADA 558
Query: 374 GIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIM 433
++G+LL R+H VELGE AA KL ++P +S YVLL +Y A W++ R +M
Sbjct: 559 AVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMM 618
Query: 434 RKQGVKKITAWSWVEHPSHVHCETI 458
++GV+KI S +E + + CE I
Sbjct: 619 NERGVEKIPGCSSIE-VNGIVCEFI 642
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/287 (31%), Positives = 143/287 (49%), Gaps = 35/287 (12%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+R +V+WTTM++GYA+ G L +R FD M E+ VV WNAM+ G Q+ + + LF +
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M +S +PDE T + +S+CS LG + I R ++K N + T+L+DM+AKCGN
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+ A +F + RNS++ A+I A GD S A FN+M + AG A
Sbjct: 440 ISEALSVFHGIQT-RNSLTYTAIIGGLALHGDASTAISYFNEMID----------AGIA- 487
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEYQIKLSI 244
PDE+T + + SAC H G + G + + + + + +
Sbjct: 488 ---------------------PDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQL 526
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGH 290
Y+ ++ + R G +EEA + + M D + L+ G HG+
Sbjct: 527 KHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGN 573
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 167/367 (45%), Gaps = 71/367 (19%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSG---NEPDETTWVTVISSCSSLGDPCLAE 95
++ SWN + G+++S E+ L+ ML G + PD T+ + C+ L L
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 96 SIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARL 155
I+ + K++ V A + M A CG+++ A+++FD+
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE-------------------- 216
Query: 156 GDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSV 215
S RDL VSWN +I GY + GE+ AI ++K ++ + KPD++TM+ +
Sbjct: 217 ---SPVRDL---------VSWNCLINGYKKIGEAEKAIYVYK-LMESEGVKPDDVTMIGL 263
Query: 216 FSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL 275
S+C LG L+ G + E ++++I N+L+ M+S+CG + EA IF + R +
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTI 323
Query: 276 VSYNTLISGLASHG-------------------------------HGIECIKLISKMKED 304
VS+ T+ISG A G G + + L +M+
Sbjct: 324 VSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTS 383
Query: 305 GIEPDRITYIGILTACSHAGLLEEG---QKVFESIKVP-DVDHYACMIDMLGRVGKLEEA 360
+PD IT I L+ACS G L+ G + E + +V ++DM + G + EA
Sbjct: 384 NTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
Query: 361 MKLIHSM 367
+ + H +
Sbjct: 444 LSVFHGI 450
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 141/274 (51%), Gaps = 19/274 (6%)
Query: 109 NYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGD---LSFAR 162
++ + LL + KC L ++I Q+ G+ + + + +I A+ L + L ++
Sbjct: 49 SFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLI-AFCALSESRYLDYSV 107
Query: 163 DLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTN--DSKPDELTMVSVFSACG 220
+ + + SWN I G++++ + L+K+M+ +S+PD T +F C
Sbjct: 108 KILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCA 167
Query: 221 HLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNT 280
L SLG + + + +++L +N+ I M++ CG ME A +F E RDLVS+N
Sbjct: 168 DLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNC 227
Query: 281 LISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK--- 337
LI+G G + I + M+ +G++PD +T IG++++CS G L G++ +E +K
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 338 ----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
+P V+ ++DM + G + EA ++ ++
Sbjct: 288 LRMTIPLVN---ALMDMFSKCGDIHEARRIFDNL 318
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 342 bits (878), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/513 (36%), Positives = 285/513 (55%), Gaps = 61/513 (11%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF- 63
P+R+V +W TM++GYA++G + AR FD+MPE++ VSWNA+LS Y Q+ E LF
Sbjct: 153 PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 64 --------------------------NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESI 97
S N D +W T+I+ + G A +
Sbjct: 213 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQL 272
Query: 98 ---------------------------VRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
R+L N A+L + + ++ A+
Sbjct: 273 FDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAK 332
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
E+FD + RN + N MI+ YA+ G +S A++LF+KMP+RD VSW +MIAGY+Q+G S
Sbjct: 333 ELFDVMPC-RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSL 250
A++LF +M + + + S S C + +L LG L + + N+L
Sbjct: 392 EALRLFVQM-EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNAL 450
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
+ MY +CGS+EEA +F+EMA +D+VS+NT+I+G + HG G ++ MK +G++PD
Sbjct: 451 LLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDD 510
Query: 311 ITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIH 365
T + +L+ACSH GL+++G++ F ++ +P+ HYACM+D+LGR G LE+A L+
Sbjct: 511 ATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
+MP EP A I+G+LL A+R+H EL E AA K+F +EP NS YVLLSN+YA +GRW +
Sbjct: 571 NMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGD 630
Query: 426 VGNVRNIMRKQGVKKITAWSWVEHPSHVHCETI 458
VG +R MR +GVKK+ +SW+E + H ++
Sbjct: 631 VGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 663
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 189/395 (47%), Gaps = 47/395 (11%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+ + V++ M++GY ++G + AR FD+MPER +VSWN M+ GY ++ + LF
Sbjct: 91 PRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFE 150
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDK--------------------- 103
M E D +W T++S + G A S+ ++ +
Sbjct: 151 IM----PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE 206
Query: 104 ----VKFHSNYFVKT--ALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGD 157
K N+ + + LL K + A++ FD + V R+ VS N +I+ YA+ G
Sbjct: 207 ACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNV-RDVVSWNTIITGYAQSGK 265
Query: 158 LSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS 217
+ AR LF++ P +D +W +M++GY QN A +LF +M N+ + +
Sbjct: 266 IDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAML------ 319
Query: 218 ACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS 277
G++ + + A + + + ++ +N++I Y++CG + EA +F +M RD VS
Sbjct: 320 -AGYVQGERMEM-AKELFDVMPCR-NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS 376
Query: 278 YNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
+ +I+G + GH E ++L +M+ +G +R ++ L+ C+ LE G+++ +
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL- 435
Query: 338 VPDVDHYACMID-----MLGRVGKLEEAMKLIHSM 367
V C + M + G +EEA L M
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM 470
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 156/318 (49%), Gaps = 20/318 (6%)
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
+ + G A +F ++ + +SVS N MIS Y R G+ AR LF++MPERD VSWN M
Sbjct: 74 YMRTGRCNEALRVFKRMPRW-SSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVM 132
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQ 239
I GY +N A +LF+ M + + TM+S ++ G + A S+ +
Sbjct: 133 IKGYVRNRNLGKARELFEIMPERDVCSWN--TMLSGYAQNGCVDD------ARSVFDRMP 184
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLIS 299
K + +N+L+ Y + MEEA ++F+ LVS+N L+ G +E +
Sbjct: 185 EKNDV-SWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 243
Query: 300 KMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEE 359
M D +++ I+T + +G ++E +++F+ V DV + M+ + +EE
Sbjct: 244 SMN----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEE 299
Query: 360 AMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEP-HNSSNYVLLSNIYA 418
A +L MP E + + ++L +++E+ A +LF V P N S + + YA
Sbjct: 300 ARELFDKMP-ERNEVSWNAMLAGYVQGERMEM----AKELFDVMPCRNVSTWNTMITGYA 354
Query: 419 LAGRWKEVGNVRNIMRKQ 436
G+ E N+ + M K+
Sbjct: 355 QCGKISEAKNLFDKMPKR 372
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 332 bits (850), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 263/452 (58%), Gaps = 38/452 (8%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V T++++ Y+ SG L A FD++P+RSVV+W A+ SGY SG E + LF M+
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
G +PD V V+S+C +GD E IV+ +++++ N FV+T L+++
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNL-------- 256
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
YA+ G + AR +F+ M E+D V+W++MI GYA N
Sbjct: 257 ------------------------YAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNS 292
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
I+LF +M+ N KPD+ ++V S+C LG+L LG W +S+++ ++ ++
Sbjct: 293 FPKEGIELFLQMLQEN-LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMA 351
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N+LI MY++CG+M +F+EM +D+V N ISGLA +GH + + ++ GI
Sbjct: 352 NALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGIS 411
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMK 362
PD T++G+L C HAGL+++G + F +I V+HY CM+D+ GR G L++A +
Sbjct: 412 PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYR 471
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
LI MPM P+A ++G+LL+ R+ K +L E +L +EP N+ NYV LSNIY++ GR
Sbjct: 472 LICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGR 531
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
W E VR++M K+G+KKI +SW+E VH
Sbjct: 532 WDEAAEVRDMMNKKGMKKIPGYSWIELEGKVH 563
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 172/349 (49%), Gaps = 43/349 (12%)
Query: 26 KTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSC 85
K + + F ++ +N++++G+ + ET+ LF + G T+ V+ +C
Sbjct: 62 KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121
Query: 86 SSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA---KCGNLKAAQEIFDQLGVYRNS 142
+ RKL +D+H+ KCG F+ +
Sbjct: 122 TRASS--------RKLG--------------IDLHSLVVKCG--------FNH-----DV 146
Query: 143 VSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIST 202
+ +++S Y+ G L+ A LF+++P+R V+W ++ +GY +G AI LFK+M+
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206
Query: 203 NDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEE 262
KPD +V V SAC H+G L G W V + E +++ + +L+ +Y++CG ME+
Sbjct: 207 G-VKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEK 265
Query: 263 ATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSH 322
A +F M +D+V+++T+I G AS+ E I+L +M ++ ++PD+ + +G L++C+
Sbjct: 266 ARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCAS 325
Query: 323 AGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
G L+ G+ I + ++ +IDM + G + ++ M
Sbjct: 326 LGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 35/283 (12%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
E Q+N TT+V YAK G ++ AR FD M E+ +V+W+ M+ GYA + E + LF
Sbjct: 242 EMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF 301
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
ML +PD+ + V +SSC+SLG L E + +D+ +F +N F+ AL+DM+AKC
Sbjct: 302 LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G + E+F + M E+D V N+ I+G
Sbjct: 362 GAMARGFEVFKE--------------------------------MKEKDIVIMNAAISGL 389
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEYQIKL 242
A+NG ++ +F + S PD T + + C H G + G+ + +I Y +K
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGIS-PDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISG 284
++ Y ++ ++ R G +++A + +M R + + + L+SG
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 175/458 (38%), Positives = 274/458 (59%), Gaps = 8/458 (1%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
RN+ +W MV+GY KSG L AR+ FD MPER VVSWN M+ GYAQ G E + + +
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
SG + +E ++ ++++C L ++ F SN + +++D +AKCG +
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQM 230
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
++A+ FD++ V ++ +IS YA+LGD+ A LF +MPE++ VSW ++IAGY +
Sbjct: 231 ESAKRCFDEMTV-KDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQ 289
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G A+ LF++MI+ KP++ T S A + SL G + ++ + +
Sbjct: 290 GSGNRALDLFRKMIALG-VKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIV 348
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
+SLI MYS+ GS+E + +F+ + D V +NT+IS LA HG G + ++++ M +
Sbjct: 349 ISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFR 408
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEA 360
++P+R T + IL ACSH+GL+EEG + FES+ V PD +HYAC+ID+LGR G +E
Sbjct: 409 VQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKEL 468
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALA 420
M+ I MP EP I+ ++L RIH ELG+ AA +L ++P +S+ Y+LLS+IYA
Sbjct: 469 MRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADH 528
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVHCETI 458
G+W+ V +R +M+K+ V K A SW+E V T+
Sbjct: 529 GKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTV 566
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 95/259 (36%), Gaps = 68/259 (26%)
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
S ++ +A E A+ + + P +L + S+ CG SL G W L
Sbjct: 15 QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDL-LASLLQQCGDTKSLKQGKWIHRHLK 73
Query: 237 EYQIKL-SILGYNSLIFMYSRCGS-------------------------------MEEAT 264
K + L N LI MY +CG + A
Sbjct: 74 ITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRAR 133
Query: 265 LIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTAC---- 320
++F M RD+VS+NT++ G A G+ E + + + GI+ + ++ G+LTAC
Sbjct: 134 VVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR 193
Query: 321 -------------------------------SHAGLLEEGQKVFESIKVPDVDHYACMID 349
+ G +E ++ F+ + V D+ + +I
Sbjct: 194 QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLIS 253
Query: 350 MLGRVGKLEEAMKLIHSMP 368
++G +E A KL MP
Sbjct: 254 GYAKLGDMEAAEKLFCEMP 272
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 325 bits (832), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 272/452 (60%), Gaps = 6/452 (1%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V +++ Y G+L +A F + E+ VVSWN+M++G+ Q G+ + + LF M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
S + T V V+S+C+ + + + +++ + + N + A+LDM+ KCG+++
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A+ +FD + +++V+ M+ YA D AR++ N MP++D V+WN++I+ Y QNG
Sbjct: 285 DAKRLFDAME-EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNG 343
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+ A+ +F E+ + K +++T+VS SAC +G+L LG W S + ++ I+++
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVT 403
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
++LI MYS+CG +E++ +F + RD+ ++ +I GLA HG G E + + KM+E ++
Sbjct: 404 SALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVK 463
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMK 362
P+ +T+ + ACSH GL++E + +F ++ VP+ HYAC++D+LGR G LE+A+K
Sbjct: 464 PNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVK 523
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
I +MP+ P ++G+LL A +IH + L E+A +L +EP N +VLLSNIYA G+
Sbjct: 524 FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGK 583
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
W+ V +R MR G+KK S +E +H
Sbjct: 584 WENVSELRKHMRVTGLKKEPGCSSIEIDGMIH 615
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 136/270 (50%), Gaps = 41/270 (15%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+++ VTWTTM+ GYA S + + AR + MP++ +V+WNA++S Y Q+G E + +F++
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354
Query: 66 M-LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+ L + ++ T V+ +S+C+ +G L I + K N+ V +AL+ M++KCG
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+L+ ++E+ FN + +RD W++MI G A
Sbjct: 415 DLEKSREV--------------------------------FNSVEKRDVFVWSAMIGGLA 442
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
+G A+ +F +M N KP+ +T +VF AC H G L A S+ ++ + I
Sbjct: 443 MHGCGNEAVDMFYKMQEAN-VKPNGVTFTNVFCACSHTG---LVDEAESLFHQMESNYGI 498
Query: 245 LG----YNSLIFMYSRCGSMEEATLIFQEM 270
+ Y ++ + R G +E+A + M
Sbjct: 499 VPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 136/255 (53%), Gaps = 9/255 (3%)
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAM--ISAYARLGDLSFARDLFNKMPERDTVSW 176
+C +L+ ++ + G + + S + + ++A + L +AR +F+++P+ ++ +W
Sbjct: 39 RCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N++I YA + +++I F +M+S + P++ T + A + SLSLG +
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIK 296
+ + + NSLI Y CG ++ A +F + +D+VS+N++I+G G + ++
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 297 LISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVD----HYACMIDMLG 352
L KM+ + ++ +T +G+L+AC+ LE G++V I+ V+ M+DM
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 353 RVGKLEEAMKLIHSM 367
+ G +E+A +L +M
Sbjct: 279 KCGSIEDAKRLFDAM 293
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 180/382 (47%), Gaps = 70/382 (18%)
Query: 23 GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS-SGNEPDETTWVTV 81
+L+ AR FD++P+ + +WN ++ YA + ++ F DM+S S P++ T+ +
Sbjct: 78 ASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFL 137
Query: 82 ISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRN 141
I + + + L +S+ K S+ FV +L+ + CG+L +A ++F + ++
Sbjct: 138 IKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK-EKD 196
Query: 142 SVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIS 201
VS N+MI+ + + G P++ A++LFK+M
Sbjct: 197 VVSWNSMINGFVQKGS-----------PDK--------------------ALELFKKM-E 224
Query: 202 TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSME 261
+ D K +TMV V SAC + +L G S + E ++ +++ N+++ MY++CGS+E
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 262 EATLIF-------------------------------QEMATRDLVSYNTLISGLASHGH 290
+A +F M +D+V++N LIS +G
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 291 GIECIKLISKMK-EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH----YA 345
E + + +++ + ++ ++IT + L+AC+ G LE G+ + IK + +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 346 CMIDMLGRVGKLEEAMKLIHSM 367
+I M + G LE++ ++ +S+
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSV 426
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 262/445 (58%), Gaps = 10/445 (2%)
Query: 12 WTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN 71
W ++V Y + GN A F +MP V S+N M+ GYA+ G +LE ++L+ M+S G
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVK--FHSNYFVKTALLDMHAKCGNLKAA 129
EPDE T ++++ C L D L + + +++ + SN + ALLDM+ KC A
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
+ FD + ++ S N M+ + RLGD+ A+ +F++MP+RD VSWNS++ GY++ G
Sbjct: 289 KRAFDAMK-KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 190 LMAIK-LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
++ LF EM KPD +TMVS+ S + G LS G W ++ Q+K +
Sbjct: 348 QRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSS 407
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEP 308
+LI MY +CG +E A ++F+ +D+ + ++I+GLA HG+G + ++L +M+E+G+ P
Sbjct: 408 ALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTP 467
Query: 309 DRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKL 363
+ +T + +LTACSH+GL+EEG VF +K P+ +HY ++D+L R G++EEA +
Sbjct: 468 NNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDI 527
Query: 364 IH-SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
+ MPM P ++GS+L+A R + +E ELA +L +EP YVLLSNIYA GR
Sbjct: 528 VQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGR 587
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWV 447
W R M +GVKK +S V
Sbjct: 588 WGYSDKTREAMENRGVKKTAGYSSV 612
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 134/267 (50%), Gaps = 36/267 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVR-LFN 64
++++ +W TMV G+ + G+++ A+ FD+MP+R +VSWN++L GY++ G TVR LF
Sbjct: 297 KKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFY 356
Query: 65 DM-LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+M + +PD T V++IS ++ G+ + + +++ + F+ +AL+DM+ KC
Sbjct: 357 EMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKC 416
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G ++ A + F E+D W SMI G
Sbjct: 417 GIIERAFMV--------------------------------FKTATEKDVALWTSMITGL 444
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVS-ILNEYQIKL 242
A +G A++LF M P+ +T+++V +AC H G + G+ + + +++
Sbjct: 445 AFHGNGQQALQLFGRM-QEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQE 269
Y SL+ + R G +EEA I Q+
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQK 530
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 266/452 (58%), Gaps = 7/452 (1%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N+ +V Y+ G + AR FD+ + V SWN M+SGY + E++ L +M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ P T + V+S+CS + D L + + + + K + ++ AL++ +A CG +
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 288
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A IF + R+ +S +++ Y G+L AR F++MP RD +SW MI GY + G
Sbjct: 289 IAVRIFRSMKA-RDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAG 347
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
++++F+EM S PDE TMVSV +AC HLGSL +G W + +++ +IK ++
Sbjct: 348 CFNESLEIFREMQSAG-MIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVG 406
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N+LI MY +CG E+A +F +M RD ++ ++ GLA++G G E IK+ +M++ I+
Sbjct: 407 NALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQ 466
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMK 362
PD ITY+G+L+AC+H+G++++ +K F ++ P + HY CM+DMLGR G ++EA +
Sbjct: 467 PDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYE 526
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
++ MPM P++ ++G+LL A+R+H + ELAA K+ +EP N + Y LL NIYA R
Sbjct: 527 ILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKR 586
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
WK++ VR + +KK +S +E H
Sbjct: 587 WKDLREVRRKIVDVAIKKTPGFSLIEVNGFAH 618
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 166/307 (54%), Gaps = 41/307 (13%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R+V++WT++V GY + GNLK AR YFD+MP R +SW M+ GY ++G E++ +F +M
Sbjct: 300 RDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREM 359
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
S+G PDE T V+V+++C+ LG + E I +DK K ++ V AL+DM+ KCG
Sbjct: 360 QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCS 419
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
+ AQ++ F+ M +RD +W +M+ G A N
Sbjct: 420 EKAQKV--------------------------------FHDMDQRDKFTWTAMVVGLANN 447
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQIKLSIL 245
G+ AIK+F +M + +PD++T + V SAC H G + + + ++++I+ S++
Sbjct: 448 GQGQEAIKVFFQMQDMS-IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLV 506
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGL---ASHGHGIECIKLISKMK 302
Y ++ M R G ++EA I ++M ++ N+++ G AS H E + ++ K
Sbjct: 507 HYGCMVDMLGRAGLVKEAYEILRKMP----MNPNSIVWGALLGASRLHNDEPMAELAAKK 562
Query: 303 EDGIEPD 309
+EPD
Sbjct: 563 ILELEPD 569
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 176/360 (48%), Gaps = 27/360 (7%)
Query: 23 GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVI 82
G++ A F K+PE VV WN M+ G+++ E VRL+ +ML G PD T+ ++
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 83 SSCSSLGDPCLAESIVRKLD----KVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
+ G A + +KL K SN +V+ AL+ M++ CG + A+ +FD+
Sbjct: 142 NGLKRDGG---ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDR-RC 197
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNS----MIAGYAQNGESLMAIK 194
+ S N MIS Y R+ + + +L +M ER+ VS S ++ + K
Sbjct: 198 KEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCK 256
Query: 195 LFKEMISTNDSKPD---ELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLI 251
E +S ++P E +V+ ++ACG + AV I + + ++ + S++
Sbjct: 257 RVHEYVSECKTEPSLRLENALVNAYAACGEMDI------AVRIFRSMKAR-DVISWTSIV 309
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
Y G+++ A F +M RD +S+ +I G G E +++ +M+ G+ PD
Sbjct: 310 KGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEF 369
Query: 312 TYIGILTACSHAGLLEEGQKVFESI---KVP-DVDHYACMIDMLGRVGKLEEAMKLIHSM 367
T + +LTAC+H G LE G+ + I K+ DV +IDM + G E+A K+ H M
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ +VV ++ Y K G + A+ F M +R +W AM+ G A +G E +++F
Sbjct: 400 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 459
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTAL------LDM 119
M +PD+ T++ V+S+C+ G A K+ S++ ++ +L +DM
Sbjct: 460 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKM-----RSDHRIEPSLVHYGCMVDM 514
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
+ G +K A EI ++ + NS+ A++ A
Sbjct: 515 LGRAGLVKEAYEILRKMPMNPNSIVWGALLGA 546
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 317 bits (812), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 175/459 (38%), Positives = 270/459 (58%), Gaps = 44/459 (9%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P R+VV++T ++ GYA G ++ A+ FD++P + VVSWNAM+SGYA++G E + LF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
DM+ + PDE+T VTV+S+C+ G L + +D F SN + AL+D+
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL----- 310
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
Y++ G+L A LF ++P +D +SWN++I GY
Sbjct: 311 ---------------------------YSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK--- 241
A+ LF+EM+ + ++ P+++TM+S+ AC HLG++ +G W + + + ++K
Sbjct: 344 HMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRW-IHVYIDKRLKGVT 401
Query: 242 -LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
S L SLI MY++CG +E A +F + + L S+N +I G A HG L S+
Sbjct: 402 NASSL-RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 460
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVG 355
M++ GI+PD IT++G+L+ACSH+G+L+ G+ +F ++ P ++HY CMID+LG G
Sbjct: 461 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
Query: 356 KLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSN 415
+EA ++I+ M MEP I+ SLL A ++H VELGE A L +EP N +YVLLSN
Sbjct: 521 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSN 580
Query: 416 IYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
IYA AGRW EV R ++ +G+KK+ S +E S VH
Sbjct: 581 IYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 619
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 195/342 (57%), Gaps = 8/342 (2%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F + E +++ WN M G+A S + ++L+ M+S G P+ T+ V+ SC+
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
+ I + K+ + +V T+L+ M+ + G L+ A ++FD+ +R+ VS A+I
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK-SPHRDVVSYTALIKG 209
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
YA G + A+ LF+++P +D VSWN+MI+GYA+ G A++LFK+M+ TN +PDE T
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN-VRPDEST 268
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
MV+V SAC GS+ LG ++++ ++ N+LI +YS+CG +E A +F+ +
Sbjct: 269 MVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQ- 330
+D++S+NTLI G E + L +M G P+ +T + IL AC+H G ++ G+
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 331 -KVFESIKVPDVDHYA----CMIDMLGRVGKLEEAMKLIHSM 367
V+ ++ V + + +IDM + G +E A ++ +S+
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI 430
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 108/250 (43%), Gaps = 44/250 (17%)
Query: 158 LSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS 217
L +A +F + E + + WN+M G+A + + + A+KL+ MIS P+ T V
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG-LLPNSYTFPFVLK 142
Query: 218 ACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS 277
+C + G + + L + + SLI MY + G +E+A +F + RD+VS
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 202
Query: 278 YNTLISGLASHGH-------------------------------GIECIKLISKMKEDGI 306
Y LI G AS G+ E ++L M + +
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH--------YACMIDMLGRVGKLE 358
PD T + +++AC+ +G +E G++V I DH +ID+ + G+LE
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWID----DHGFGSNLKIVNALIDLYSKCGELE 318
Query: 359 EAMKLIHSMP 368
A L +P
Sbjct: 319 TACGLFERLP 328
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 315 bits (807), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 173/482 (35%), Positives = 265/482 (54%), Gaps = 44/482 (9%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ YA ++ +AR FD++PER+V+ N M+ Y +G E V++F M PD
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
T+ V+ +CS G + I KV S FV L+ M+ KCG L A+ + D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 135 QLGVYRNSVSCNAMISAYA---RLGD---------------------------------- 157
++ R+ VS N+++ YA R D
Sbjct: 200 EMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 158 LSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS 217
+ + +D+F KM ++ VSWN MI Y +N + A++L+ M + +PD +++ SV
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM-EADGFEPDAVSITSVLP 317
Query: 218 ACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS 277
ACG +LSLG + ++ ++L N+LI MY++CG +E+A +F+ M +RD+VS
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 278 YNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
+ +IS G G + + L SK+++ G+ PD I ++ L ACSHAGLLEEG+ F+ +
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 338 -----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELG 392
P ++H ACM+D+LGR GK++EA + I M MEP+ ++G+LL A R+H ++G
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Query: 393 ELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSH 452
LAA KLF + P S YVLLSNIYA AGRW+EV N+RNIM+ +G+KK S VE
Sbjct: 498 LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI 557
Query: 453 VH 454
+H
Sbjct: 558 IH 559
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 132/304 (43%), Gaps = 71/304 (23%)
Query: 6 QRNVVTWTTMVTGYAK-------------------------------------SGNLKTA 28
+R+VV+W ++V GYA+ + N+
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYV 262
Query: 29 RIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSL 88
+ F KM ++S+VSWN M+ Y ++ +E V L++ M + G EPD + +V+ +C
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 89 GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAM 148
L + I +++ K N ++ AL+DM+AKCG L+ A+++F+ + R+ VS AM
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAM 381
Query: 149 ISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPD 208
ISAY G A LF+K+ + V PD
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGLV--------------------------------PD 409
Query: 209 ELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLSILGYNSLIFMYSRCGSMEEATLIF 267
+ V+ +AC H G L G ++ + Y+I + ++ + R G ++EA
Sbjct: 410 SIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFI 469
Query: 268 QEMA 271
Q+M+
Sbjct: 470 QDMS 473
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 5/169 (2%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N++ ++ YAK G L+ AR F+ M R VVSW AM+S Y SG + V LF+ +
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKL-DKVKFHSNYFVKTALLDMHAKCGNL 126
SG PD +VT +++CS G S + + D K ++D+ + G +
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGD----LSFARDLFNKMPER 171
K A + + N A++ A D L A LF PE+
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQ 511
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/458 (37%), Positives = 270/458 (58%), Gaps = 15/458 (3%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER-SVVSWNAMLSGYAQSGAALETVRLFN 64
+++ +WTTM+TGY K+G + M + +V++NAM+SGY G E + +
Sbjct: 216 EKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVR 275
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESI---VRKLDKVKFHSNYFVKTALLDMHA 121
M+SSG E DE T+ +VI +C++ G L + + V + + FH + +L+ ++
Sbjct: 276 RMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYY 331
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
KCG A+ IF+++ ++ VS NA++S Y G + A+ +F +M E++ +SW MI+
Sbjct: 332 KCGKFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMIS 390
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
G A+NG +KLF M +P + +C LG+ G + L +
Sbjct: 391 GLAENGFGEEGLKLFSCM-KREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFD 449
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
S+ N+LI MY++CG +EEA +F+ M D VS+N LI+ L HGHG E + + +M
Sbjct: 450 SSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM 509
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGK 356
+ GI PDRIT + +LTACSHAGL+++G+K F+S++ P DHYA +ID+L R GK
Sbjct: 510 LKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGK 569
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
+A +I S+P +P A I+ +LL+ R+H +ELG +AA KLF + P + Y+LLSN+
Sbjct: 570 FSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNM 629
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+A G+W+EV VR +MR +GVKK A SW+E + VH
Sbjct: 630 HAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVH 667
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 199/421 (47%), Gaps = 70/421 (16%)
Query: 2 MGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMP--ERSVVSWNAMLSGYAQSGAALET 59
+ EP + + TTMV+GY SG++ AR F+K P R V +NAM++G++ +
Sbjct: 75 ISEPDK--IARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYF-------- 111
+ LF M G +PD T+ +V++ + + D + V+FH+
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVLAGLALVADD--------EKQCVQFHAAALKSGAGYIT 184
Query: 112 -VKTALLDMHAKCGN----LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFN 166
V AL+ +++KC + L +A+++FD++ + ++ S M++ Y + G +L
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEI-LEKDERSWTTMMTGYVKNGYFDLGEELLE 243
Query: 167 KMPER-DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSL 225
M + V++N+MI+GY G A+++ + M+S+ + DE T SV AC G L
Sbjct: 244 GMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSG-IELDEFTYPSVIRACATAGLL 302
Query: 226 SLGIWAVSILNEYQIKLSILGY---NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTL- 281
LG ++ Y ++ + NSL+ +Y +CG +EA IF++M +DLVS+N L
Sbjct: 303 QLG----KQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALL 358
Query: 282 ------------------------------ISGLASHGHGIECIKLISKMKEDGIEPDRI 311
ISGLA +G G E +KL S MK +G EP
Sbjct: 359 SGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDY 418
Query: 312 TYIGILTACSHAGLLEEGQKVFESIKVPDVDHYA----CMIDMLGRVGKLEEAMKLIHSM 367
+ G + +C+ G GQ+ + D +I M + G +EEA ++ +M
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 368 P 368
P
Sbjct: 479 P 479
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 146/288 (50%), Gaps = 35/288 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P +++V+W +++GY SG++ A++ F +M E++++SW M+SG A++G E ++LF+
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M G EP + + I SC+ LG C + +L K+ F S+ AL+ M+AKCG
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
++ A+++F + +SVS NA+I+A LG
Sbjct: 467 VVEEARQVFRTMPCL-DSVSWNALIAA---LG---------------------------- 494
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQIKLS 243
Q+G A+ +++EM+ +PD +T+++V +AC H G + G + S+ Y+I
Sbjct: 495 QHGHGAEAVDVYEEMLKKG-IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPG 553
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS-YNTLISGLASHGH 290
Y LI + R G +A + + + + + L+SG HG+
Sbjct: 554 ADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGN 601
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 146/329 (44%), Gaps = 66/329 (20%)
Query: 93 LAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAY 152
LA ++ + F + L+D++ K L A+++FD++ + ++ M+S Y
Sbjct: 32 LARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEIS-EPDKIARTTMVSGY 90
Query: 153 ARLGDLSFARDLFNKMP--ERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDEL 210
GD++ AR +F K P RDTV +N+MI G++ N + AI LF +M KPD
Sbjct: 91 CASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFKPDNF 149
Query: 211 TMVSVFSACG------------HLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCG 258
T SV + H +L G ++ ++ N+L+ +YS+C
Sbjct: 150 TFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVS-----------NALVSVYSKCA 198
Query: 259 S----MEEATLIFQEMATRD--------------------------------LVSYNTLI 282
S + A +F E+ +D LV+YN +I
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 283 SGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI-KVPDV 341
SG + G E ++++ +M GIE D TY ++ AC+ AGLL+ G++V + + D
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318
Query: 342 DHY--ACMIDMLGRVGKLEEAMKLIHSMP 368
+ ++ + + GK +EA + MP
Sbjct: 319 SFHFDNSLVSLYYKCGKFDEARAIFEKMP 347
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 311 bits (798), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 164/460 (35%), Positives = 271/460 (58%), Gaps = 17/460 (3%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R++ +W M+ + + G + A F++M ER +V+WN+M+SG+ Q G L + +F+ M
Sbjct: 210 RDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM 269
Query: 67 L-SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
L S PD T +V+S+C++L C+ + I + F + V AL+ M+++CG
Sbjct: 270 LRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGG 329
Query: 126 LKAAQEIFDQLGVYRNSVS-CNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
++ A+ + +Q G + A++ Y +LGD++ A+++F + +RD V+W +MI GY
Sbjct: 330 VETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYE 389
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW----AVSILNEYQI 240
Q+G AI LF+ M+ +P+ T+ ++ S L SLS G AV Y +
Sbjct: 390 QHGSYGEAINLFRSMVG-GGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSV 448
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEM-ATRDLVSYNTLISGLASHGHGIECIKLIS 299
+S N+LI MY++ G++ A+ F + RD VS+ ++I LA HGH E ++L
Sbjct: 449 SVS----NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE 504
Query: 300 KMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRV 354
M +G+ PD ITY+G+ +AC+HAGL+ +G++ F+ +K +P + HYACM+D+ GR
Sbjct: 505 TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRA 564
Query: 355 GKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLS 414
G L+EA + I MP+EP +GSLL+A R+HK ++LG++AA +L +EP NS Y L+
Sbjct: 565 GLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALA 624
Query: 415 NIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
N+Y+ G+W+E +R M+ VKK +SW+E VH
Sbjct: 625 NLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVH 664
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 200/435 (45%), Gaps = 70/435 (16%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P R +W T+++ Y+K G++ + +FD++P+R VSW M+ GY G + +R+
Sbjct: 76 PLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMG 135
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
DM+ G EP + T V++S ++ + + + K+ N V +LL+M+AKCG
Sbjct: 136 DMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCG 195
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ A+ +FD++ V R+ S NAMI+ + ++G + A F +M ERD V+WNSMI+G+
Sbjct: 196 DPMMAKFVFDRM-VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN 254
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
Q G L A+ +F +M+ + PD T+ SV SAC +L L +G S + +S
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 245 LGYNSLIFMYSRCGSME---------------------------------EATLIFQEMA 271
+ N+LI MYSRCG +E +A IF +
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI----------------- 314
RD+V++ +I G HG E I L M G P+ T
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQ 434
Query: 315 ------------------GILTACSHAGLLEEGQKVFESIKVP-DVDHYACMIDMLGRVG 355
++T + AG + + F+ I+ D + MI L + G
Sbjct: 435 IHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHG 494
Query: 356 KLEEAMKLIHSMPME 370
EEA++L +M ME
Sbjct: 495 HAEEALELFETMLME 509
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 159/369 (43%), Gaps = 70/369 (18%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G + +T ++ GY K G++ A+ F + +R VV+W AM+ GY Q G+ E + L
Sbjct: 341 GTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINL 400
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F M+ G P+ T ++S SSL + I K + V AL+ M+AK
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
GN+ +A FD + R++VS +MI A
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIA------------------------------- 489
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
AQ+G + A++LF+ M+ +PD +T V VFSAC H G ++ G ++ + +
Sbjct: 490 LAQHGHAEEALELFETML-MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKII 548
Query: 243 SILG-YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
L Y ++ ++ R G ++EA ++M
Sbjct: 549 PTLSHYACMVDLFGRAGLLQEAQEFIEKMP------------------------------ 578
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH---YACMIDMLGRVGKLE 358
IEPD +T+ +L+AC ++ G+ E + + + ++ Y+ + ++ GK E
Sbjct: 579 ----IEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 359 EAMKLIHSM 367
EA K+ SM
Sbjct: 635 EAAKIRKSM 643
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 311 bits (798), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 267/449 (59%), Gaps = 11/449 (2%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T + YA G + AR FD+M R VV+WN M+ Y + G E +LF +M S
Sbjct: 150 TGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVM 209
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
PDE ++S+C G+ +I L + + + TAL+ M+A G + A+E
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
F ++ V RN AM+S Y++ G L A+ +F++ ++D V W +MI+ Y ++ A
Sbjct: 270 FRKMSV-RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL--NEYQIKLSILGYNSL 250
+++F+EM + KPD ++M SV SAC +LG L W S + N + +LSI N+L
Sbjct: 329 LRVFEEMCCSG-IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI--NNAL 385
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
I MY++CG ++ +F++M R++VS++++I+ L+ HG + + L ++MK++ +EP+
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNE 445
Query: 311 ITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIH 365
+T++G+L CSH+GL+EEG+K+F S+ P ++HY CM+D+ GR L EA+++I
Sbjct: 446 VTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIE 505
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
SMP+ + I+GSL++A RIH ++ELG+ AA ++ +EP + VL+SNIYA RW++
Sbjct: 506 SMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWED 565
Query: 426 VGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
V N+R +M ++ V K S ++ H
Sbjct: 566 VRNIRRVMEEKNVFKEKGLSRIDQNGKSH 594
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 154/306 (50%), Gaps = 39/306 (12%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
RN+ T MV+GY+K G L A++ FD+ ++ +V W M+S Y +S E +R+F +M
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
SG +PD + +VIS+C++LG A+ + + S + AL++M+AKCG L
Sbjct: 336 CCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGL 395
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
A +++F+++ RN VS ++MI+A + G+ S A LF +M + +
Sbjct: 396 DATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENV------------- 441
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSI 244
+P+E+T V V C H G + G I+A S+ +EY I +
Sbjct: 442 -------------------EPNEVTFVGVLYGCSHSGLVEEGKKIFA-SMTDEYNITPKL 481
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEM-ATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
Y ++ ++ R + EA + + M ++V + +L+S HG +E K +K
Sbjct: 482 EHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE-LELGKFAAKRIL 540
Query: 304 DGIEPD 309
+ +EPD
Sbjct: 541 E-LEPD 545
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 178/411 (43%), Gaps = 80/411 (19%)
Query: 36 PERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAE 95
P S+V +N L ++S T+ + + G D+ +++ ++ + S + L E
Sbjct: 73 PPESIV-FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS--ALFE 129
Query: 96 SIVRKLDKVKFH----SNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
+ +L V F + FV+T +DM+A CG + A+ +FD++ +R+ V+ N MI
Sbjct: 130 GM--ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMS-HRDVVTWNTMIER 186
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
Y R G + A KLF+EM +N PDE+
Sbjct: 187 YCRFGLVD-------------------------------EAFKLFEEMKDSN-VMPDEMI 214
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFM------------------ 253
+ ++ SACG G++ L E +++ +L+ M
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMS 274
Query: 254 -------------YSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
YS+CG +++A +IF + +DLV + T+IS + E +++ +
Sbjct: 275 VRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEE 334
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYA----CMIDMLGRVGK 356
M GI+PD ++ +++AC++ G+L++ + V I V ++ +I+M + G
Sbjct: 335 MCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGG 394
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVE--LGELAAAKLFTVEPH 405
L+ + MP + + S++NA +H + L A K VEP+
Sbjct: 395 LDATRDVFEKMPRR-NVVSWSSMINALSMHGEASDALSLFARMKQENVEPN 444
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Query: 160 FARDLFNKMPER-DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA 218
+A ++F+ +P +++ +N + +++ E I LF + I + D+ + + + A
Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATI-LFYQRIRHVGGRLDQFSFLPILKA 120
Query: 219 CGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSY 278
+ +L G+ + + + MY+ CG + A +F EM+ RD+V++
Sbjct: 121 VSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTW 180
Query: 279 NTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV 338
NT+I G E KL +MK+ + PD + I++AC G + + ++E +
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 339 PDV 341
DV
Sbjct: 241 NDV 243
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 306 bits (783), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 270/486 (55%), Gaps = 39/486 (8%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF- 63
P+RNVV+WT +V GY +G + A F KMPE++ VSW ML G+ Q G + +L+
Sbjct: 106 PERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYE 165
Query: 64 --------------------------NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESI 97
++ +E TW T+++ G +
Sbjct: 166 MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTG---YGQNNRVDD- 221
Query: 98 VRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGD 157
RK+ V T++L + + G ++ A+E+F+ + V + ++CNAMIS + G+
Sbjct: 222 ARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPV-KPVIACNAMISGLGQKGE 280
Query: 158 LSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS 217
++ AR +F+ M ER+ SW ++I + +NG L A+ LF ++ +P T++S+ S
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFI-LMQKQGVRPTFPTLISILS 339
Query: 218 ACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS 277
C L SL G + L Q + + + L+ MY +CG + ++ LIF ++D++
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 278 YNTLISGLASHGHGIECIKLISKMKEDG-IEPDRITYIGILTACSHAGLLEEGQKVFESI 336
+N++ISG ASHG G E +K+ +M G +P+ +T++ L+ACS+AG++EEG K++ES+
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 337 KV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVEL 391
+ P HYACM+DMLGR G+ EAM++I SM +EP A ++GSLL A R H Q+++
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDV 519
Query: 392 GELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPS 451
E A KL +EP NS Y+LLSN+YA GRW +V +R +M+ + V+K SW E +
Sbjct: 520 AEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVEN 579
Query: 452 HVHCET 457
VH T
Sbjct: 580 KVHAFT 585
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/466 (25%), Positives = 203/466 (43%), Gaps = 98/466 (21%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P RN+++W +V+GY K+G + AR FD MPER+VVSW A++ GY +G LF
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFW 134
Query: 65 DMLSSGNEPDETTWVTVISSCSSLG---DPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
M E ++ +W ++ G D C ++ D + +T+++
Sbjct: 135 KM----PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNI-------ARTSMIHGLC 183
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
K G + A+EIFD++ R+ ++ M++ Y + + AR +F+ MPE+ VSW SM+
Sbjct: 184 KEGRVDEAREIFDEMS-ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLM 242
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
GY QNG A +LF+ M KP
Sbjct: 243 GYVQNGRIEDAEELFEVM----PVKP---------------------------------- 264
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
++ N++I + G + +A +F M R+ S+ T+I +G +E + L M
Sbjct: 265 --VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILM 322
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP--DVDHY--ACMIDMLGRVGKL 357
++ G+ P T I IL+ C+ L G++V + DVD Y + ++ M + G+L
Sbjct: 323 QKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGEL 382
Query: 358 -------------------------------EEAMKLIHSMPM----EPHAGIYGSLLNA 382
EEA+K+ MP+ +P+ + + L+A
Sbjct: 383 VKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Query: 383 TRIHKQVELG---ELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
VE G + +F V+P +++Y + ++ AGR+ E
Sbjct: 443 CSYAGMVEEGLKIYESMESVFGVKP-ITAHYACMVDMLGRAGRFNE 487
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 48/226 (21%)
Query: 144 SCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTN 203
+ N I+ +R+G + AR LF+ + SWNSM+AGY N A KLF EM
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM---- 74
Query: 204 DSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEA 263
PD +I+ +N L+ Y + G ++EA
Sbjct: 75 ---PDR---------------------------------NIISWNGLVSGYMKNGEIDEA 98
Query: 264 TLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHA 323
+F M R++VS+ L+ G +G L KM E +++++ +L
Sbjct: 99 RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQD 154
Query: 324 GLLEEGQKVFESIKVPDVDHYA--CMIDMLGRVGKLEEAMKLIHSM 367
G +++ K++E I PD D+ A MI L + G+++EA ++ M
Sbjct: 155 GRIDDACKLYEMI--PDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 305 bits (782), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 266/482 (55%), Gaps = 38/482 (7%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+RNVV+WT MV GY + G + A F +MPER+ VSW M G G + +L++
Sbjct: 106 PERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYD 165
Query: 65 -----DMLSSGN----------------------EPDETTWVTVISSCSSLGDPCLAESI 97
D+++S N E + TW T+I+ +
Sbjct: 166 MMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV----DV 221
Query: 98 VRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGD 157
RKL +V T++L + G ++ A+E F+ + + + ++CNAMI + +G+
Sbjct: 222 ARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM-KPVIACNAMIVGFGEVGE 280
Query: 158 LSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS 217
+S AR +F+ M +RD +W MI Y + G L A+ LF +M +P +++S+ S
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQM-QKQGVRPSFPSLISILS 339
Query: 218 ACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS 277
C L SL G + L Q + + L+ MY +CG + +A L+F +++D++
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 278 YNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
+N++ISG ASHG G E +K+ +M G P+++T I ILTACS+AG LEEG ++FES++
Sbjct: 400 WNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESME 459
Query: 338 -----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELG 392
P V+HY+C +DMLGR G++++AM+LI SM ++P A ++G+LL A + H +++L
Sbjct: 460 SKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLA 519
Query: 393 ELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSH 452
E+AA KLF EP N+ YVLLS+I A +W +V VR MR V K SW+E
Sbjct: 520 EVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKK 579
Query: 453 VH 454
VH
Sbjct: 580 VH 581
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 178/394 (45%), Gaps = 55/394 (13%)
Query: 11 TWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSG 70
+W ++V+GY +G K AR FD+M ER+VVSWN ++SGY ++ +E +F M
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELM---- 105
Query: 71 NEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
E + +W ++ G AES+ ++ + S + L+D G + A+
Sbjct: 106 PERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLID----DGRIDKAR 161
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
+++D + V ++ V+ MI R G + AR +F++M ER+ V+W +MI GY QN
Sbjct: 162 KLYDMMPV-KDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVD 220
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLG-SLSLGIWAVSILNEYQIKLSILGYNS 249
+A KLF+ M + E++ S+ LG +LS I E ++ N+
Sbjct: 221 VARKLFEVM-----PEKTEVSWTSML-----LGYTLSGRIEDAEEFFEVMPMKPVIACNA 270
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
+I + G + +A +F M RD ++ +I G +E + L ++M++ G+ P
Sbjct: 271 MIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 310 RITYIGILTACSHAGLLEEGQK-----------------------------------VFE 334
+ I IL+ C+ L+ G++ VF+
Sbjct: 331 FPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFD 390
Query: 335 SIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
D+ + +I G EEA+K+ H MP
Sbjct: 391 RFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 50/309 (16%)
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+K + I + + V+C+ IS +R+G ++ AR F+ + + SWNS+++GY
Sbjct: 1 MKRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFS 60
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
NG A +LF EM N ++
Sbjct: 61 NGLPKEARQLFDEMSERN----------------------------------------VV 80
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
+N L+ Y + + EA +F+ M R++VS+ ++ G G E L +M E
Sbjct: 81 SWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER- 139
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIH 365
+ +++ + G +++ +K+++ + V DV MI L R G+++EA +LI
Sbjct: 140 ---NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEA-RLIF 195
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSS-NYVLLSNIYALAGRWK 424
E + + +++ R + +V++ A KLF V P + ++ + Y L+GR +
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDV----ARKLFEVMPEKTEVSWTSMLLGYTLSGRIE 251
Query: 425 EVGNVRNIM 433
+ +M
Sbjct: 252 DAEEFFEVM 260
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 304 bits (779), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 255/428 (59%), Gaps = 11/428 (2%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F + +V + AM+ G+ SG + + V L++ M+ + PD +V+ +C D
Sbjct: 84 FSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DL 139
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
+ I ++ K+ F S+ V +++++ K G L A+++FD++ R+ V+ MI+
Sbjct: 140 KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMP-DRDHVAATVMINC 198
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
Y+ G + A +LF + +DTV W +MI G +N E A++LF+EM N S +E T
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVS-ANEFT 257
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
V V SAC LG+L LG W S + +++LS N+LI MYSRCG + EA +F+ M
Sbjct: 258 AVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR 317
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK 331
+D++SYNT+ISGLA HG +E I M G P+++T + +L ACSH GLL+ G +
Sbjct: 318 DKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLE 377
Query: 332 VFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIH 386
VF S+K P ++HY C++D+LGRVG+LEEA + I ++P+EP + G+LL+A +IH
Sbjct: 378 VFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIH 437
Query: 387 KQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSW 446
+ELGE A +LF E +S YVLLSN+YA +G+WKE +R MR G++K S
Sbjct: 438 GNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCST 497
Query: 447 VEHPSHVH 454
+E + +H
Sbjct: 498 IEVDNQIH 505
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 168/328 (51%), Gaps = 11/328 (3%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
M+ Y KSG L A+ FD+MP+R V+ M++ Y++ G E + LF D+ D
Sbjct: 164 MMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDV----KIKD 219
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
W +I + A + R++ +N F +L + G L+ + +
Sbjct: 220 TVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHS 279
Query: 135 QLGVYRNSVS---CNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+ R +S NA+I+ Y+R GD++ AR +F M ++D +S+N+MI+G A +G S+
Sbjct: 280 FVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVE 339
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLSILGYNSL 250
AI F++M++ +P+++T+V++ +AC H G L +G+ + + + ++ I Y +
Sbjct: 340 AINEFRDMVNRG-FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCI 398
Query: 251 IFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
+ + R G +EEA + + D + TL+S HG+ +E + I+K + PD
Sbjct: 399 VDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGN-MELGEKIAKRLFESENPD 457
Query: 310 RITYIGILTACSHAGLLEEGQKVFESIK 337
TY+ + + +G +E ++ ES++
Sbjct: 458 SGTYVLLSNLYASSGKWKESTEIRESMR 485
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 304 bits (778), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 252/453 (55%), Gaps = 37/453 (8%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ ++V T++ YAK G+L+ AR F+KMP+R V+W ++SGY+Q + + FN
Sbjct: 92 RHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQ 151
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
ML G P+E T +VI + ++ C + K F SN V +ALLD+
Sbjct: 152 MLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDL------ 205
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
Y R G + A+ +F+ + R+ VSWN++IAG+A+
Sbjct: 206 --------------------------YTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
+ A++LF+ M+ + +P + S+F AC G L G W + + + KL
Sbjct: 240 RSGTEKALELFQGMLR-DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
N+L+ MY++ GS+ +A IF +A RD+VS+N+L++ A HG G E + +M+ G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAM 361
I P+ I+++ +LTACSH+GLL+EG +E +K VP+ HY ++D+LGR G L A+
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAG 421
+ I MP+EP A I+ +LLNA R+HK ELG AA +F ++P + +V+L NIYA G
Sbjct: 419 RFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGG 478
Query: 422 RWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
RW + VR M++ GVKK A SWVE + +H
Sbjct: 479 RWNDAARVRKKMKESGVKKEPACSWVEIENAIH 511
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/460 (35%), Positives = 271/460 (58%), Gaps = 50/460 (10%)
Query: 8 NVVTWTTMVTGYAKSGNL--KTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
++ ++ Y++ G L + A F+KM ER VSWN+ML G ++G + RLF++
Sbjct: 151 DIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDE 210
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M + D +W T +LD +A+C
Sbjct: 211 M----PQRDLISWNT-----------------------------------MLDGYARCRE 231
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP--ERDTVSWNSMIAGY 183
+ A E+F+++ RN+VS + M+ Y++ GD+ AR +F+KMP ++ V+W +IAGY
Sbjct: 232 MSKAFELFEKMP-ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGY 290
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
A+ G A +L +M+++ K D ++S+ +AC G LSLG+ SIL + +
Sbjct: 291 AEKGLLKEADRLVDQMVASG-LKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSN 349
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
N+L+ MY++CG++++A +F ++ +DLVS+NT++ GL HGHG E I+L S+M+
Sbjct: 350 AYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRR 409
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLE 358
+GI PD++T+I +L +C+HAGL++EG F S++ VP V+HY C++D+LGRVG+L+
Sbjct: 410 EGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLK 469
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
EA+K++ +MPMEP+ I+G+LL A R+H +V++ + L ++P + NY LLSNIYA
Sbjct: 470 EAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYA 529
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVHCETI 458
A W+ V ++R+ M+ GV+K + S VE +H T+
Sbjct: 530 AAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTV 569
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 37/288 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMP--ERSVVSWNAMLSGYAQSGAALETVRL 62
P+RN V+W+TMV GY+K+G+++ AR+ FDKMP ++VV+W +++GYA+ G E RL
Sbjct: 243 PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
+ M++SG + D ++++++C+ G L I L + SN +V ALLDM+AK
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK 362
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CGNLK A D+FN +P++D VSWN+M+ G
Sbjct: 363 CGNLKK--------------------------------AFDVFNDIPKKDLVSWNTMLHG 390
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEYQIK 241
+G AI+LF M +PD++T ++V +C H G + GI + S+ Y +
Sbjct: 391 LGVHGHGKEAIELFSRM-RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLV 449
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASH 288
+ Y L+ + R G ++EA + Q M ++V + L+ H
Sbjct: 450 PQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMH 497
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 175/345 (50%), Gaps = 49/345 (14%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F+++ E +V N+++ +AQ+ + +F++M G D T+ ++ +CS
Sbjct: 74 FNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWL 133
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL--KAAQEIFDQLGVYRNSVSCNAMI 149
+ + + ++K+ S+ +V AL+D +++CG L + A ++F+++ R++VS N+M+
Sbjct: 134 PVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMS-ERDTVSWNSML 192
Query: 150 SAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDE 209
+ G+L AR LF++MP+RD +SWN+M+ GYA+ E A +LF++M N
Sbjct: 193 GGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERN------ 246
Query: 210 LTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQE 269
+ +++++ YS+ G ME A ++F +
Sbjct: 247 ----------------------------------TVSWSTMVMGYSKAGDMEMARVMFDK 272
Query: 270 M--ATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLE 327
M +++V++ +I+G A G E +L+ +M G++ D I IL AC+ +GLL
Sbjct: 273 MPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLS 332
Query: 328 EGQKVFESIKVPDVDHYA----CMIDMLGRVGKLEEAMKLIHSMP 368
G ++ +K ++ A ++DM + G L++A + + +P
Sbjct: 333 LGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIP 377
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 163/372 (43%), Gaps = 44/372 (11%)
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNS 178
KC NL +++ Q+ ++ + +ISA + + A +FN++ E + NS
Sbjct: 28 KCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNS 87
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+I +AQN + A +F EM D T + AC L + + + +
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEM-QRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKL 146
Query: 239 QIKLSILGYNSLIFMYSRCGSM--EEATLIFQEMATRDLVSYNTLISGLASHGHGIECIK 296
+ I N+LI YSRCG + +A +F++M+ RD VS+N+++ GL G + +
Sbjct: 147 GLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARR 206
Query: 297 LISKMKE----------DGIE---------------PDR--ITYIGILTACSHAGLLEEG 329
L +M + DG P+R +++ ++ S AG +E
Sbjct: 207 LFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMA 266
Query: 330 QKVFESIKVP--DVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPHAGIYGSLLNATR 384
+ +F+ + +P +V + +I G L+EA +L+ M ++ A S+L A
Sbjct: 267 RVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACT 326
Query: 385 IHKQVELGELAAAKLFTVEPHNSSNYVL--LSNIYALAGRWKEVGNVRNIMRKQGVKKIT 442
+ LG + + S+ YVL L ++YA G K+ +V N + K K +
Sbjct: 327 ESGLLSLG-MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK---KDLV 382
Query: 443 AWSWVEHPSHVH 454
+W+ + H VH
Sbjct: 383 SWNTMLHGLGVH 394
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/443 (35%), Positives = 267/443 (60%), Gaps = 21/443 (4%)
Query: 25 LKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE--PDETTWVTVI 82
L A D+ + ++ + N+M+ + +S ++ + +LSSGN+ PD T ++
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLV 115
Query: 83 SSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNS 142
+C+ L + + F ++ V+T L+ ++A+ G L + ++F NS
Sbjct: 116 QACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVF-------NS 168
Query: 143 VSC------NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
+ C AM++A AR GD+ FAR LF MPERD ++WN+MI+GYAQ GES A+ +F
Sbjct: 169 IPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVF 228
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSR 256
++ K + + M+SV SAC LG+L G WA S + +IK+++ +L+ +Y++
Sbjct: 229 -HLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAK 287
Query: 257 CGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGI 316
CG ME+A +F M +++ ++++ ++GLA +G G +C++L S MK+DG+ P+ +T++ +
Sbjct: 288 CGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSV 347
Query: 317 LTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEP 371
L CS G ++EGQ+ F+S++ P ++HY C++D+ R G+LE+A+ +I MPM+P
Sbjct: 348 LRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKP 407
Query: 372 HAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRN 431
HA ++ SLL+A+R++K +ELG LA+ K+ +E N YVLLSNIYA + W V +VR
Sbjct: 408 HAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQ 467
Query: 432 IMRKQGVKKITAWSWVEHPSHVH 454
M+ +GV+K S +E VH
Sbjct: 468 SMKSKGVRKQPGCSVMEVNGEVH 490
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%), Gaps = 34/270 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P + V T MVT A+ G++ AR F+ MPER ++WNAM+SGYAQ G + E + +F+
Sbjct: 170 PCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH 229
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M G + + ++V+S+C+ LG +++ K + T L+D++AKCG
Sbjct: 230 LMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCG 289
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+++ A E+ F M E++ +W+S + G A
Sbjct: 290 DMEKAMEV--------------------------------FWGMEEKNVYTWSSALNGLA 317
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKLS 243
NG ++LF ++ + P+ +T VSV C +G + G S+ NE+ I+
Sbjct: 318 MNGFGEKCLELF-SLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQ 376
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATR 273
+ Y L+ +Y+R G +E+A I Q+M +
Sbjct: 377 LEHYGCLVDLYARAGRLEDAVSIIQQMPMK 406
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 301 bits (771), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 258/428 (60%), Gaps = 10/428 (2%)
Query: 28 ARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSS 87
AR + + R+ W A++ GYA G E + ++ M P T+ ++ +C +
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 88 LGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNA 147
+ D L + +++ +V ++DM+ KC ++ A+++FD++ R+ +S
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTE 220
Query: 148 MISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKP 207
+I+AYAR+G++ A +LF +P +D V+W +M+ G+AQN + A++ F M + +
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM-EKSGIRA 279
Query: 208 DELTMVSVFSACGHLGSLSLGIWAVSILNE--YQIKLSILGYNSLIFMYSRCGSMEEATL 265
DE+T+ SAC LG+ AV I + Y ++ ++LI MYS+CG++EEA
Sbjct: 280 DEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVN 339
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTACSHAG 324
+F M +++ +Y+++I GLA+HG E + L M + I+P+ +T++G L ACSH+G
Sbjct: 340 VFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSG 399
Query: 325 LLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSL 379
L+++G++VF+S+ P DHY CM+D+LGR G+L+EA++LI +M +EPH G++G+L
Sbjct: 400 LVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGAL 459
Query: 380 LNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVK 439
L A RIH E+ E+AA LF +EP NY+LLSN+YA AG W V VR +++++G+K
Sbjct: 460 LGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLK 519
Query: 440 KITAWSWV 447
K A SWV
Sbjct: 520 KTPAVSWV 527
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 35/270 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+R+V++WT ++ YA+ GN++ A F+ +P + +V+W AM++G+AQ+ E + F+
Sbjct: 211 PERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFD 270
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKF--HSNYFVKTALLDMHAK 122
M SG DE T IS+C+ LG A+ V+ K + + + +AL+DM++K
Sbjct: 271 RMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSK 330
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CGN++ A + F M ++ +++SMI G
Sbjct: 331 CGNVEEAVNV--------------------------------FMSMNNKNVFTYSSMILG 358
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIK 241
A +G + A+ LF M++ + KP+ +T V AC H G + G S+ + ++
Sbjct: 359 LATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQ 418
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
+ Y ++ + R G ++EA + + M+
Sbjct: 419 PTRDHYTCMVDLLGRTGRLQEALELIKTMS 448
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 131/296 (44%), Gaps = 43/296 (14%)
Query: 114 TALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDL--SFARDLFNKM 168
++L+ C NL ++I + G+ ++ +I +LG +AR + +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 169 PERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG 228
R+ W ++I GYA G+ AI ++ M + P T ++ ACG + L+LG
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCM-RKEEITPVSFTFSALLKACGTMKDLNLG 168
Query: 229 ---------------IWAVSILNEYQIKL----------------SILGYNSLIFMYSRC 257
++ + + + +K ++ + LI Y+R
Sbjct: 169 RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARV 228
Query: 258 GSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGIL 317
G+ME A +F+ + T+D+V++ +++G A + E ++ +M++ GI D +T G +
Sbjct: 229 GNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYI 288
Query: 318 TACSHAG---LLEEGQKVFESIKVPDVDHY---ACMIDMLGRVGKLEEAMKLIHSM 367
+AC+ G + ++ + DH + +IDM + G +EEA+ + SM
Sbjct: 289 SACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/455 (38%), Positives = 277/455 (60%), Gaps = 17/455 (3%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+RN+VTW M+ GY+K+G ++ A FD++ E+ +VSW M+ G + E + +
Sbjct: 235 PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 294
Query: 65 DMLSSGNEPDETTWVTVIS-SCSSLGDP---CLAESIVRKLDKVKFHSNYFVKTALLDMH 120
+ML G +P E V ++S S S+G L +IV++ F F++ ++ +
Sbjct: 295 EMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR----GFDCYDFLQATIIHFY 350
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
A ++K A + F+ V + S NA+I+ + + G + AR++F++ ++D SWN+MI
Sbjct: 351 AVSNDIKLALQQFEA-SVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMI 409
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
+GYAQ+ +A+ LF+EMIS++ KPD +TMVSVFSA LGSL G A LN I
Sbjct: 410 SGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTI 469
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQE---MATRDLVSYNTLISGLASHGHGIECIKL 297
+ ++I MY++CGS+E A IF + +++ + +N +I G A+HGH + L
Sbjct: 470 PPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDL 529
Query: 298 ISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLG 352
S ++ I+P+ IT++G+L+AC HAGL+E G+ FES+K PD+ HY CM+D+LG
Sbjct: 530 YSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG 589
Query: 353 RVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVL 412
+ G+LEEA ++I MP++ I+G LL+A+R H VE+ ELAA +L ++P + V+
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVM 649
Query: 413 LSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWV 447
LSN+YA AGRW++V VR MR + V+ A+S V
Sbjct: 650 LSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 146/524 (27%), Positives = 245/524 (46%), Gaps = 89/524 (16%)
Query: 11 TWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSG 70
++ MV GY +S L A FD MPERS VS+ ++ GYAQ+ E + LF +M + G
Sbjct: 109 SFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLG 168
Query: 71 NEPDETTWVTVISSCSSLG---DPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+E T TVIS+CS LG D + +S+ KL K FV T LL M+ C LK
Sbjct: 169 IMLNEVTLATVISACSHLGGIWDCRMLQSLAIKL---KLEGRVFVSTNLLHMYCLCLCLK 225
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A+++FD++ RN V+ N M++ Y++ G + A +LF+++ E+D VSW +MI G +
Sbjct: 226 DARKLFDEMP-ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKN 284
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI------------------ 229
+ A+ + EM+ KP E+ MV + SA S G+
Sbjct: 285 QLDEALVYYTEMLRCG-MKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 230 ------WAVS-----ILNEYQ--IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV 276
+AVS L +++ +K I N+LI + + G +E+A +F + +D+
Sbjct: 344 ATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 277 SYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTACSHAGLLEEGQKVFES 335
S+N +ISG A + L +M ++PD IT + + +A S G LEEG++ +
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 336 IKV----PDVDHYACMIDMLGRVGKLEEAMKLIH-------------------------- 365
+ P+ + A +IDM + G +E A+ + H
Sbjct: 464 LNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHA 523
Query: 366 -----------SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFT---VEPHNSSNYV 411
S+P++P++ + +L+A VELG+ + + +EP + +Y
Sbjct: 524 KLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEP-DIKHYG 582
Query: 412 LLSNIYALAGRWKEVGNVRNIMRKQGVK-KITAWSWVEHPSHVH 454
+ ++ AGR +E + +++K VK + W + S H
Sbjct: 583 CMVDLLGKAGRLEE---AKEMIKKMPVKADVMIWGMLLSASRTH 623
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 156/323 (48%), Gaps = 49/323 (15%)
Query: 69 SGNEPD-ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SG D E V+ + SC+S D I ++ K SN ++ ++L+M+AKC L
Sbjct: 34 SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A+ +F +S S N M+ Y R L A LF+ MPER VS+ ++I GYAQN
Sbjct: 94 DAESVFRDHAKL-DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNN 152
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+ A++LF+EM + +E+T+ +V SAC HLG GIW +L IKL + G
Sbjct: 153 QWSEAMELFREMRNLG-IMLNEVTLATVISACSHLG----GIWDCRMLQSLAIKLKLEGR 207
Query: 248 ----NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
+L+ MY C +++A +F EM R+LV++N +++G
Sbjct: 208 VFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGY------------------ 249
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKL 363
S AGL+E+ +++F+ I D+ + MID R +L+EA+
Sbjct: 250 -----------------SKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVY 292
Query: 364 IHSM---PMEPHAGIYGSLLNAT 383
M M+P + LL+A+
Sbjct: 293 YTEMLRCGMKPSEVMMVDLLSAS 315
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 300 bits (767), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/439 (35%), Positives = 259/439 (58%), Gaps = 9/439 (2%)
Query: 22 SGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTV 81
S L A+I FD WN M+ G++ S ++ L+ ML S + T+ ++
Sbjct: 62 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL 121
Query: 82 ISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRN 141
+ +CS+L I ++ K+ + ++ + +L++ +A GN K A +FD++ +
Sbjct: 122 LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPD 180
Query: 142 SVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIS 201
VS N++I Y + G + A LF KM E++ +SW +MI+GY Q + A++LF EM
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM-Q 239
Query: 202 TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL-SILGYNSLIFMYSRCGSM 260
+D +PD +++ + SAC LG+L G W S LN+ +I++ S+LG LI MY++CG M
Sbjct: 240 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGC-VLIDMYAKCGEM 298
Query: 261 EEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTAC 320
EEA +F+ + + + ++ LISG A HGHG E I +M++ GI+P+ IT+ +LTAC
Sbjct: 299 EEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
Query: 321 SHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGI 375
S+ GL+EEG+ +F S++ P ++HY C++D+LGR G L+EA + I MP++P+A I
Sbjct: 359 SYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI 418
Query: 376 YGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRK 435
+G+LL A RIHK +ELGE L ++P++ YV +NI+A+ +W + R +M++
Sbjct: 419 WGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKE 478
Query: 436 QGVKKITAWSWVEHPSHVH 454
QGV K+ S + H
Sbjct: 479 QGVAKVPGCSTISLEGTTH 497
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 34/270 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+ + V+W +++ GY K+G + A F KM E++ +SW M+SGY Q+ E ++LF+
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+M +S EPD + +S+C+ LG + I L+K + + + L+DM+AKCG
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
++ A E+F + ++ +W ++I+GYA
Sbjct: 297 EMEEALEVFKNI--------------------------------KKKSVQAWTALISGYA 324
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQIKLS 243
+G AI F EM KP+ +T +V +AC + G + G + S+ +Y +K +
Sbjct: 325 YHGHGREAISKFMEMQKMG-IKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPT 383
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATR 273
I Y ++ + R G ++EA QEM +
Sbjct: 384 IEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 413
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ YAK G ++ A F + ++SV +W A++SGYA G E + F +M G +P+
Sbjct: 288 LIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPN 347
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTA------LLDMHAKCGNLKA 128
T+ V+++CS G L E KL +Y +K ++D+ + G L
Sbjct: 348 VITFTAVLTACSYTG---LVEE--GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDE 402
Query: 129 AQEIFDQLGVYRNSVSCNAMISA 151
A+ ++ + N+V A++ A
Sbjct: 403 AKRFIQEMPLKPNAVIWGALLKA 425
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 298 bits (764), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 250/456 (54%), Gaps = 47/456 (10%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+ + ++ M++ Y ++ N + A+ +FD+MP + SWN M++GYA+ G + LF
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M+ E +E +W +IS + +CG
Sbjct: 180 SMM----EKNEVSWNAMISG-----------------------------------YIECG 200
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP-ERDTVSWNSMIAGY 183
+L+ A F ++ R V+ AMI+ Y + + A +F M ++ V+WN+MI+GY
Sbjct: 201 DLEKASHFF-KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY 259
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
+N +KLF+ M+ +P+ + S C L +L LG I+++ +
Sbjct: 260 VENSRPEDGLKLFRAMLEEG-IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCND 318
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
+ SLI MY +CG + +A +F+ M +D+V++N +ISG A HG+ + + L +M +
Sbjct: 319 VTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESI----KV-PDVDHYACMIDMLGRVGKLE 358
+ I PD IT++ +L AC+HAGL+ G FES+ KV P DHY CM+D+LGR GKLE
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
EA+KLI SMP PHA ++G+LL A R+HK VEL E AA KL + N++ YV L+NIYA
Sbjct: 439 EALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYA 498
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
RW++V VR M++ V K+ +SW+E + VH
Sbjct: 499 SKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVH 534
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 146/314 (46%), Gaps = 38/314 (12%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM-AIKLFKEMISTND 204
N +I+ R GD+ A +F+ M ++T++WNS++ G +++ +M A +LF E+
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEI----- 119
Query: 205 SKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEAT 264
+PD + ++ +C ++ +++ A S + K +N++I Y+R G ME+A
Sbjct: 120 PEPDTFS-YNIMLSC-YVRNVNFEK-AQSFFDRMPFK-DAASWNTMITGYARRGEMEKAR 175
Query: 265 LIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR--ITYIGILTACSH 322
+F M ++ VS+N +ISG IEC L + P R + + ++T
Sbjct: 176 ELFYSMMEKNEVSWNAMISGY------IECGDLEKASHFFKVAPVRGVVAWTAMITGYMK 229
Query: 323 AGLLEEGQKVFESIKV-PDVDHYACMIDMLGRVGKLEEAMKLIHSMPME---PH-AGIYG 377
A +E + +F+ + V ++ + MI + E+ +KL +M E P+ +G+
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289
Query: 378 SLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAG------RWKEVGNVRN 431
+LL + EL+A +L S L +++ AL + E+G+
Sbjct: 290 ALLGCS---------ELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWK 340
Query: 432 IMRKQGVKKITAWS 445
+ K + AW+
Sbjct: 341 LFEVMKKKDVVAWN 354
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/443 (35%), Positives = 269/443 (60%), Gaps = 11/443 (2%)
Query: 18 GYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETT 77
YA G ++ + F + + + + A ++ + +G + L+ +LSS P+E T
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 78 WVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG 137
+ +++ SCS+ + ++ K + +V T L+D++AK G++ +AQ++FD++
Sbjct: 133 FSSLLKSCSTKSGKLIHTHVL----KFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 138 VYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFK 197
R+ VS AMI+ YA+ G++ AR LF+ M ERD VSWN MI GYAQ+G A+ LF+
Sbjct: 189 -ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRC 257
++++ KPDE+T+V+ SAC +G+L G W + +I+L++ LI MYS+C
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 258 GSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE-DGIEPDRITYIGI 316
GS+EEA L+F + +D+V++N +I+G A HG+ + ++L ++M+ G++P IT+IG
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 317 LTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEP 371
L AC+HAGL+ EG ++FES+ P ++HY C++ +LGR G+L+ A + I +M M+
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDA 427
Query: 372 HAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRN 431
+ ++ S+L + ++H LG+ A L + NS YVLLSNIYA G ++ V VRN
Sbjct: 428 DSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRN 487
Query: 432 IMRKQGVKKITAWSWVEHPSHVH 454
+M+++G+ K S +E + VH
Sbjct: 488 LMKEKGIVKEPGISTIEIENKVH 510
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 145/288 (50%), Gaps = 35/288 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+R++V+ T M+T YAK GN++ AR FD M ER +VSWN M+ GYAQ G + + LF
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 65 DMLSSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+L+ G +PDE T V +S+CS +G I + + N V T L+DM++KC
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G+L+ A +F+ ++ V+ NAMI+ YA + GY
Sbjct: 308 GSLEEAVLVFNDTP-RKDIVAWNAMIAGYA--------------------------MHGY 340
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKL 242
+Q+ A++LF EM +P ++T + AC H G ++ GI S+ EY IK
Sbjct: 341 SQD-----ALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKP 395
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEM-ATRDLVSYNTLISGLASHG 289
I Y L+ + R G ++ A + M D V +++++ HG
Sbjct: 396 KIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 295 bits (756), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 265/458 (57%), Gaps = 44/458 (9%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRL 62
++VV+W MV GY++ G + A F+KM E VV+W+A +SGYAQ G E + +
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
MLSSG +P+E T ++V+S C+S+G AL MH K
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVG-------------------------AL--MHGK 385
Query: 123 CGNLKAAQEIFD--QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM--PERDTVSWNS 178
+ A + D + G ++ N +I YA+ + AR +F+ + ERD V+W
Sbjct: 386 EIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTV 445
Query: 179 MIAGYAQNGESLMAIKLFKEMISTN-DSKPDELTMVSVFSACGHLGSLSLG--IWAVSIL 235
MI GY+Q+G++ A++L EM + ++P+ T+ AC L +L +G I A ++
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECI 295
N+ Q + + N LI MY++CGS+ +A L+F M ++ V++ +L++G HG+G E +
Sbjct: 506 NQ-QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEAL 564
Query: 296 KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDM 350
+ +M+ G + D +T + +L ACSH+G++++G + F +K P +HYAC++D+
Sbjct: 565 GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 351 LGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNY 410
LGR G+L A++LI MPMEP ++ + L+ RIH +VELGE AA K+ + ++ +Y
Sbjct: 625 LGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSY 684
Query: 411 VLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
LLSN+YA AGRWK+V +R++MR +GVKK SWVE
Sbjct: 685 TLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 207/401 (51%), Gaps = 26/401 (6%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
NV +V Y++ +L AR FD+M VVSWN+++ YA+ G + +F+ M
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 68 SS-GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
+ G PD T V V+ C+SLG L + + + N FV L+DM+AKCG +
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAG 182
A +F + V ++ VS NAM++ Y+++G A LF KM E D V+W++ I+G
Sbjct: 281 DEANTVFSNMSV-KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
YAQ G A+ + ++M+S+ KP+E+T++SV S C +G+L G +Y I L
Sbjct: 340 YAQRGLGYEALGVCRQMLSSG-IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL 398
Query: 243 SILGY-------NSLIFMYSRCGSMEEATLIFQEMAT--RDLVSYNTLISGLASHGHGIE 293
G+ N LI MY++C ++ A +F ++ RD+V++ +I G + HG +
Sbjct: 399 RKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 294 CIKLISKMKEDGIE--PDRITYIGILTACSHAGLLEEGQKVF------ESIKVPDVDHYA 345
++L+S+M E+ + P+ T L AC+ L G+++ + VP +
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFVSN 517
Query: 346 CMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIH 386
C+IDM + G + +A +L+ M + + SL+ +H
Sbjct: 518 CLIDMYAKCGSISDA-RLVFDNMMAKNEVTWTSLMTGYGMH 557
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 170/365 (46%), Gaps = 74/365 (20%)
Query: 15 MVTGYAKSGNLKTARIYFDKMP--ERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
+++ Y G L A + P + V WN+++ Y +G A + + LF M S
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWT 124
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
PD T+ V +C + ES F SN FV AL+ M+++C +L A+++
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKV 184
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
FD++ V+ + VS N++I +YA+L G+ +A
Sbjct: 185 FDEMSVW-DVVSWNSIIESYAKL-------------------------------GKPKVA 212
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSL 250
+++F M + +PD +T+V+V C LG+ SLG + ++ +E I+ +G N L
Sbjct: 213 LEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE-MIQNMFVG-NCL 270
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED------ 304
+ MY++CG M+EA +F M+ +D+VS+N +++G + G + ++L KM+E+
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 305 -----------------------------GIEPDRITYIGILTACSHAGLLEEGQKVF-E 334
GI+P+ +T I +L+ C+ G L G+++
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 335 SIKVP 339
+IK P
Sbjct: 391 AIKYP 395
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/449 (35%), Positives = 251/449 (55%), Gaps = 40/449 (8%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T ++ Y K L+ AR D+MPE++VVSW AM+S Y+Q+G + E + +F +M+ S +
Sbjct: 91 TRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK 150
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
P+E T+ TV++SC L + I + K + S+ FV ++LLDM+AK G +K
Sbjct: 151 PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE---- 206
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
AR++F +PERD VS ++IAGYAQ G A
Sbjct: 207 ----------------------------AREIFECLPERDVVSCTAIIAGYAQLGLDEEA 238
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
+++F + S S P+ +T S+ +A L L G A + ++ + NSLI
Sbjct: 239 LEMFHRLHSEGMS-PNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK-EDGIEPDRI 311
MYS+CG++ A +F M R +S+N ++ G + HG G E ++L M+ E ++PD +
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 312 TYIGILTACSHAGLLEEGQKVFESIKV------PDVDHYACMIDMLGRVGKLEEAMKLIH 365
T + +L+ CSH + + G +F+ + P +HY C++DMLGR G+++EA + I
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
MP +P AG+ GSLL A R+H V++GE +L +EP N+ NYV+LSN+YA AGRW +
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWAD 477
Query: 426 VGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
V NVR +M ++ V K SW++H +H
Sbjct: 478 VNNVRAMMMQKAVTKEPGRSWIQHEQTLH 506
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 134/273 (49%), Gaps = 44/273 (16%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++ ++++ YAK+G +K AR F+ +PER VVS A+++GYAQ G E + +F+ +
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 68 SSGNEPDETTWVTVISSCSSL-----GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
S G P+ T+ +++++ S L G + R+L F++ ++ +L+DM++K
Sbjct: 247 SEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL---PFYA--VLQNSLIDMYSK 301
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CGNL A+ +FD + R ++S NA M+ G
Sbjct: 302 CGNLSYARRLFDNMP-ERTAISWNA-------------------------------MLVG 329
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGH--LGSLSLGIWAVSILNEYQI 240
Y+++G ++LF+ M KPD +T+++V S C H + L I+ + EY
Sbjct: 330 YSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT 389
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATR 273
K Y ++ M R G ++EA + M ++
Sbjct: 390 KPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/447 (37%), Positives = 248/447 (55%), Gaps = 47/447 (10%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
++VV T+ V Y K +L +AR F +MPER+ VSW A++ Y +SG E +F+ M
Sbjct: 143 KDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLM 202
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
E + +W AL+D K G+L
Sbjct: 203 ----PERNLGSW-----------------------------------NALVDGLVKSGDL 223
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
A+++FD++ R+ +S +MI YA+ GD+ ARDLF + D +W+++I GYAQN
Sbjct: 224 VNAKKLFDEMP-KRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQN 282
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI-L 245
G+ A K+F EM + N KPDE MV + SAC +G L S L++ K S
Sbjct: 283 GQPNEAFKVFSEMCAKN-VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHY 341
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
+LI M ++CG M+ A +F+EM RDLVSY +++ G+A HG G E I+L KM ++G
Sbjct: 342 VVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG 401
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEA 360
I PD + + IL C + L+EEG + FE ++ + DHY+C++++L R GKL+EA
Sbjct: 402 IVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEA 461
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALA 420
+LI SMP E HA +GSLL +H E+ E+ A LF +EP ++ +YVLLSNIYA
Sbjct: 462 YELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAAL 521
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSWV 447
RW +V ++R+ M + G+ KI SW+
Sbjct: 522 DRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 153/290 (52%), Gaps = 38/290 (13%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+R+++++T+M+ GYAK G++ +AR F++ V +W+A++ GYAQ+G E ++F+
Sbjct: 234 PKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKV--KFHSNYFVKTALLDMHAK 122
+M + +PDE V ++S+CS +G L E + L + KF S+Y V AL+DM+AK
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAK 352
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CG++ A ++F++ MP+RD VS+ SM+ G
Sbjct: 353 CGHMDRAAKLFEE--------------------------------MPQRDLVSYCSMMEG 380
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQIK 241
A +G AI+LF++M+ PDE+ + CG + G+ ++ +Y I
Sbjct: 381 MAIHGCGSEAIRLFEKMVDEG-IVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSIL 439
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS-YNTLISGLASHGH 290
S Y+ ++ + SR G ++EA + + M S + +L+ G + HG+
Sbjct: 440 ASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGN 489
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 117/283 (41%), Gaps = 38/283 (13%)
Query: 164 LFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLG 223
+F ++P T WN +I GY+ + + M+ T ++PDE T V C + G
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 224 SLSLG----------------IWAVSILNEY---------------QIKLSILGYNSLIF 252
+ +G + S ++ Y + + + + +L+
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
Y + G +EEA +F M R+L S+N L+ GL G + KL +M + I I+
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI----IS 240
Query: 313 YIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PM 369
Y ++ + G + + +FE + DV ++ +I + G+ EA K+ M +
Sbjct: 241 YTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 370 EPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVL 412
+P I L++A EL E + L SS+YV+
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV 343
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 160/453 (35%), Positives = 254/453 (56%), Gaps = 56/453 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T ++ Y+ G++ AR FDK +R++ WNA+ +G E + L+ M G E
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVE 175
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVR------KLDKVKFHSNYFVKTALLDMHAKCGNL 126
D T+ V+ +C + C +++ L + + S+ ++ T L+DM
Sbjct: 176 SDRFTYTYVLKAC--VASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM------- 226
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
YAR G + +A +F MP R+ VSW++MIA YA+N
Sbjct: 227 -------------------------YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKN 261
Query: 187 GESLMAIKLFKEMI-STNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL--- 242
G++ A++ F+EM+ T DS P+ +TMVSV AC L +L G +++ Y ++
Sbjct: 262 GKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQG----KLIHGYILRRGLD 317
Query: 243 SILGY-NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
SIL ++L+ MY RCG +E +F M RD+VS+N+LIS HG+G + I++ +M
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFES------IKVPDVDHYACMIDMLGRVG 355
+G P +T++ +L ACSH GL+EEG+++FE+ IK P ++HYACM+D+LGR
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIK-PQIEHYACMVDLLGRAN 436
Query: 356 KLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSN 415
+L+EA K++ M EP ++GSLL + RIH VEL E A+ +LF +EP N+ NYVLL++
Sbjct: 437 RLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLAD 496
Query: 416 IYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
IYA A W EV V+ ++ +G++K+ W+E
Sbjct: 497 IYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWME 529
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 36/268 (13%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V TT+V YA+ G + A F MP R+VVSW+AM++ YA++G A E +R F +M+
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMM 275
Query: 68 --SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
+ + P+ T V+V+ +C+SL + I + + S V +AL+ M+ +CG
Sbjct: 276 RETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
L+ Q +FD++ R+ VS N++IS+Y + GY +
Sbjct: 336 LEVGQRVFDRMHD-RDVVSWNSLISSYG--------------------------VHGYGK 368
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQIKLSI 244
AI++F+EM++ N + P +T VSV AC H G + G + ++ IK I
Sbjct: 369 K-----AIQIFEEMLA-NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQI 422
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMAT 272
Y ++ + R ++EA + Q+M T
Sbjct: 423 EHYACMVDLLGRANRLDEAAKMVQDMRT 450
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 15/206 (7%)
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA-V 232
+S N +I + G+ AI++ + +S P + T + CGH SLS +
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVL-----SQESSPSQQTYELLILCCGHRSSLSDALRVHR 101
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGI 292
IL+ + L LI MYS GS++ A +F + R + +N L L GHG
Sbjct: 102 HILDNGSDQDPFLA-TKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGE 160
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGL----LEEGQKVFESIKVPDVDHY---- 344
E + L KM G+E DR TY +L AC + L +G+++ + +
Sbjct: 161 EVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIM 220
Query: 345 ACMIDMLGRVGKLEEAMKLIHSMPME 370
++DM R G ++ A + MP+
Sbjct: 221 TTLVDMYARFGCVDYASYVFGGMPVR 246
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 291 bits (745), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 160/459 (34%), Positives = 277/459 (60%), Gaps = 12/459 (2%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAM---LSGYAQSGAALETVRL 62
R+ + + + +G+L+ A F P + N M LS + A + +
Sbjct: 44 NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITV 103
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
+ + + +PD T+ V+ + D I ++ F S+ V T L+ M+
Sbjct: 104 YRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFS 163
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP--ERDTVSWNSMI 180
CG L A+++FD++ V +V NA+++ Y ++G++ AR L MP R+ VSW +I
Sbjct: 164 CGGLGDARKMFDEMLVKDVNV-WNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVI 222
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
+GYA++G + AI++F+ M+ N +PDE+T+++V SAC LGSL LG S ++ +
Sbjct: 223 SGYAKSGRASEAIEVFQRMLMEN-VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGM 281
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
++ N++I MY++ G++ +A +F+ + R++V++ T+I+GLA+HGHG E + + ++
Sbjct: 282 NRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNR 341
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVG 355
M + G+ P+ +T+I IL+ACSH G ++ G+++F S++ P+++HY CMID+LGR G
Sbjct: 342 MVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAG 401
Query: 356 KLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSN 415
KL EA ++I SMP + +A I+GSLL A+ +H +ELGE A ++L +EP+NS NY+LL+N
Sbjct: 402 KLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLAN 461
Query: 416 IYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+Y+ GRW E +RN+M+ GVKK+ S +E + V+
Sbjct: 462 LYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVY 500
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 291 bits (744), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 163/452 (36%), Positives = 256/452 (56%), Gaps = 6/452 (1%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N + + +V Y K + A+ FD+ ++ NAM S Y + G E + +FN M+
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SG PD + ++ ISSCS L + +S + + F S + AL+DM+ KC
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A IFD++ + V+ N++++ Y G++ A + F MPE++ VSWN++I+G Q
Sbjct: 390 TAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
AI++F M S D +TM+S+ SACGHLG+L L W + + I+L +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
+L+ M+SRCG E A IF + RD+ ++ I +A G+ I+L M E G++
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGKLEEAMK 362
PD + ++G LTACSH GL+++G+++F S+ P+ HY CM+D+LGR G LEEA++
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
LI MPMEP+ I+ SLL A R+ VE+ AA K+ + P + +YVLLSN+YA AGR
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
W ++ VR M+++G++K S ++ H
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 720
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 182/373 (48%), Gaps = 20/373 (5%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+++ ++V YA+ G L +AR FD+M ER+VVSW +M+ GYA+ A + V LF M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 67 LSSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
+ P+ T V VIS+C+ L D E + + N + +AL+DM+ KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIA 181
+ A+ +FD+ G N CNAM S Y R G A +FN M + D +S S I+
Sbjct: 287 IDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDEL--TMVSVFSACGHLGSLSLGIWAVSILNEYQ 239
+Q L ++ D + ++ ++ C + A I +
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT------AFRIFDRMS 399
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLIS 299
K +++ +NS++ Y G ++ A F+ M +++VS+NT+ISGL E I++
Sbjct: 400 NK-TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 300 KMK-EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDHYACMIDMLGRV 354
M+ ++G+ D +T + I +AC H G L+ + ++ I+ DV ++DM R
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 355 GKLEEAMKLIHSM 367
G E AM + +S+
Sbjct: 519 GDPESAMSIFNSL 531
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 159/336 (47%), Gaps = 50/336 (14%)
Query: 43 WNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLD 102
+N+++ GYA SG E + LF M++SG PD+ T+ +S+C+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA---------------- 145
Query: 103 KVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFAR 162
K + N + +H + A+++F Q N+++ YA G+L AR
Sbjct: 146 KSRAKGNG------IQIHGLIVKMGYAKDLFVQ----------NSLVHFYAECGELDSAR 189
Query: 163 DLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHL 222
+F++M ER+ VSW SMI GYA+ + A+ LF M+ + P+ +TMV V SAC L
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 223 GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLI 282
L G + + I+++ L ++L+ MY +C +++ A +F E +L N +
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 283 SGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS-----------HAGLLEEGQK 331
S G E + + + M + G+ PDRI+ + +++CS H +L G +
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 332 VFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
+++I +IDM + + + A ++ M
Sbjct: 370 SWDNI-------CNALIDMYMKCHRQDTAFRIFDRM 398
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 156/336 (46%), Gaps = 39/336 (11%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ VVTW ++V GY ++G + A F+ MPE+++VSWN ++SG Q E + +F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 66 MLSS-GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M S G D T +++ S+C LG LA+ I ++K + + T L+DM ++CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ ++A I FN + RD +W + I A
Sbjct: 520 DPESAMSI--------------------------------FNSLTNRDVSAWTAAIGAMA 547
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKLS 243
G + AI+LF +MI KPD + V +AC H G + G S+L + +
Sbjct: 548 MAGNAERAIELFDDMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 606
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMK 302
+ Y ++ + R G +EEA + ++M + V +N+L++ G+ +E + + K
Sbjct: 607 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN-VE-MAAYAAEK 664
Query: 303 EDGIEPDRI-TYIGILTACSHAGLLEEGQKVFESIK 337
+ P+R +Y+ + + AG + KV S+K
Sbjct: 665 IQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 700
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 158 LSFARDLFNKMPERDTV-SWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVF 216
LSFA+++F T +NS+I GYA +G AI LF M+++ S PD+ T
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFGL 141
Query: 217 SACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV 276
SAC + GI ++ + + NSL+ Y+ CG ++ A +F EM+ R++V
Sbjct: 142 SACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV 201
Query: 277 SYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTACSHAGLLEEGQKVFES 335
S+ ++I G A + + L +M +++ + P+ +T + +++AC+ LE G+KV+
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 336 IKVPDVD----HYACMIDMLGRVGKLEEAMKLI 364
I+ ++ + ++DM + ++ A +L
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 291 bits (744), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 163/452 (36%), Positives = 256/452 (56%), Gaps = 6/452 (1%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N + + +V Y K + A+ FD+ ++ NAM S Y + G E + +FN M+
Sbjct: 270 NDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMM 329
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SG PD + ++ ISSCS L + +S + + F S + AL+DM+ KC
Sbjct: 330 DSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQD 389
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A IFD++ + V+ N++++ Y G++ A + F MPE++ VSWN++I+G Q
Sbjct: 390 TAFRIFDRMS-NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGS 448
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
AI++F M S D +TM+S+ SACGHLG+L L W + + I+L +
Sbjct: 449 LFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLG 508
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
+L+ M+SRCG E A IF + RD+ ++ I +A G+ I+L M E G++
Sbjct: 509 TTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLK 568
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGKLEEAMK 362
PD + ++G LTACSH GL+++G+++F S+ P+ HY CM+D+LGR G LEEA++
Sbjct: 569 PDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQ 628
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
LI MPMEP+ I+ SLL A R+ VE+ AA K+ + P + +YVLLSN+YA AGR
Sbjct: 629 LIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGR 688
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
W ++ VR M+++G++K S ++ H
Sbjct: 689 WNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTH 720
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 182/373 (48%), Gaps = 20/373 (5%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+++ ++V YA+ G L +AR FD+M ER+VVSW +M+ GYA+ A + V LF M
Sbjct: 167 KDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 67 LSSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
+ P+ T V VIS+C+ L D E + + N + +AL+DM+ KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIA 181
+ A+ +FD+ G N CNAM S Y R G A +FN M + D +S S I+
Sbjct: 287 IDVAKRLFDEYGA-SNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDEL--TMVSVFSACGHLGSLSLGIWAVSILNEYQ 239
+Q L ++ D + ++ ++ C + A I +
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT------AFRIFDRMS 399
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLIS 299
K +++ +NS++ Y G ++ A F+ M +++VS+NT+ISGL E I++
Sbjct: 400 NK-TVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFC 458
Query: 300 KMK-EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDHYACMIDMLGRV 354
M+ ++G+ D +T + I +AC H G L+ + ++ I+ DV ++DM R
Sbjct: 459 SMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC 518
Query: 355 GKLEEAMKLIHSM 367
G E AM + +S+
Sbjct: 519 GDPESAMSIFNSL 531
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 159/336 (47%), Gaps = 50/336 (14%)
Query: 43 WNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLD 102
+N+++ GYA SG E + LF M++SG PD+ T+ +S+C+
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACA---------------- 145
Query: 103 KVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFAR 162
K + N + +H + A+++F Q N+++ YA G+L AR
Sbjct: 146 KSRAKGNG------IQIHGLIVKMGYAKDLFVQ----------NSLVHFYAECGELDSAR 189
Query: 163 DLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHL 222
+F++M ER+ VSW SMI GYA+ + A+ LF M+ + P+ +TMV V SAC L
Sbjct: 190 KVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKL 249
Query: 223 GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLI 282
L G + + I+++ L ++L+ MY +C +++ A +F E +L N +
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 283 SGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS-----------HAGLLEEGQK 331
S G E + + + M + G+ PDRI+ + +++CS H +L G +
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 332 VFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
+++I +IDM + + + A ++ M
Sbjct: 370 SWDNI-------CNALIDMYMKCHRQDTAFRIFDRM 398
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 36/288 (12%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ VVTW ++V GY ++G + A F+ MPE+++VSWN ++SG Q E + +F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 66 MLSS-GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M S G D T +++ S+C LG LA+ I ++K + + T L+DM ++CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ ++A I FN + RD +W + I A
Sbjct: 520 DPESAMSI--------------------------------FNSLTNRDVSAWTAAIGAMA 547
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKLS 243
G + AI+LF +MI KPD + V +AC H G + G S+L + +
Sbjct: 548 MAGNAERAIELFDDMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPE 606
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGH 290
+ Y ++ + R G +EEA + ++M + V +N+L++ G+
Sbjct: 607 DVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGN 654
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 111/213 (52%), Gaps = 7/213 (3%)
Query: 158 LSFARDLFNKMPERDTV-SWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVF 216
LSFA+++F T +NS+I GYA +G AI LF M+++ S PD+ T
Sbjct: 83 LSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGIS-PDKYTFPFGL 141
Query: 217 SACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV 276
SAC + GI ++ + + NSL+ Y+ CG ++ A +F EM+ R++V
Sbjct: 142 SACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVV 201
Query: 277 SYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTACSHAGLLEEGQKVFES 335
S+ ++I G A + + L +M +++ + P+ +T + +++AC+ LE G+KV+
Sbjct: 202 SWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF 261
Query: 336 IKVPDVD----HYACMIDMLGRVGKLEEAMKLI 364
I+ ++ + ++DM + ++ A +L
Sbjct: 262 IRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLF 294
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
Q +V TT+V +++ G+ ++A F+ + R V +W A + A +G A + LF+D
Sbjct: 502 QLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDD 561
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M+ G +PD +V +++CS G +V++ ++ F+S +L +H
Sbjct: 562 MIEQGLKPDGVAFVGALTACSHGG-------LVQQGKEI-FYS-------MLKLH----- 601
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP-ERDTVSWNSMIAGYA 184
GV V M+ R G L A L MP E + V WNS++A
Sbjct: 602 -----------GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACR 650
Query: 185 QNGESLMA 192
G MA
Sbjct: 651 VQGNVEMA 658
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 257/458 (56%), Gaps = 48/458 (10%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPE--RSVVSWNAMLSGYAQSGAALETV-R 61
P+R+ V++ +M+ GY K G + +AR FD MP ++++SWN+M+SGYAQ+ ++ +
Sbjct: 183 PKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASK 242
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF DM E D +W +++D +
Sbjct: 243 LFADM----PEKDLISW-----------------------------------NSMIDGYV 263
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
K G ++ A+ +FD + R+ V+ MI YA+LG + A+ LF++MP RD V++NSM+A
Sbjct: 264 KHGRIEDAKGLFDVMP-RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 322
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
GY QN + A+++F +M + PD+ T+V V A LG LS I + E Q
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY 382
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
L +LI MYS+CGS++ A L+F+ + + + +N +I GLA HG G ++ ++
Sbjct: 383 LGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQI 442
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGK 356
+ ++PD IT++G+L ACSH+GL++EG FE ++ P + HY CM+D+L R G
Sbjct: 443 ERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGS 502
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
+E A LI MP+EP+ I+ + L A HK+ E GEL A L +N S+YVLLSN+
Sbjct: 503 IELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNM 562
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
YA G WK+V VR +M+++ ++KI SW+E VH
Sbjct: 563 YASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVH 600
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 163/374 (43%), Gaps = 45/374 (12%)
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
S G D W VI S S DP A ++ + + + F + +L ++ G +
Sbjct: 78 FSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFV 137
Query: 127 KAAQEI---FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
K +I + G++ + N +I Y + G L +R +F++MP+RD+VS+NSMI GY
Sbjct: 138 KGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 184 AQNGESLMAIKLF-------------KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
+ G + A +LF MIS D + + S A + L W
Sbjct: 198 VKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFA--DMPEKDLISW 255
Query: 231 AVSI--------------LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV 276
I L + + ++ + ++I Y++ G + A +F +M RD+V
Sbjct: 256 NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVV 315
Query: 277 SYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTACSHAGLLEEGQKVFES 335
+YN++++G + + +E +++ S M KE + PD T + +L A + G L + +
Sbjct: 316 AYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDM--H 373
Query: 336 IKVPDVDHY------ACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQV 389
+ + + Y +IDM + G ++ AM + + + +++ IH
Sbjct: 374 LYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIGGLAIHG-- 430
Query: 390 ELGELAAAKLFTVE 403
LGE A L +E
Sbjct: 431 -LGESAFDMLLQIE 443
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 254/452 (56%), Gaps = 38/452 (8%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V ++ Y+K G ++ AR FD M ERS+VSWN M+ Y ++ E + +F +M
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMR 154
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ G + E T +V+S+C D + + K N +V TALLD++AKCG +K
Sbjct: 155 NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIK 214
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A ++ F M ++ +V+W+SM+AGY QN
Sbjct: 215 DAVQV--------------------------------FESMQDKSSVTWSSMVAGYVQNK 242
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
A+ L++ + ++ T+ SV AC +L +L G +++ + ++
Sbjct: 243 NYEEALLLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
+S + MY++CGS+ E+ +IF E+ ++L +NT+ISG A H E + L KM++DG+
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMK 362
P+ +T+ +L+ C H GL+EEG++ F+ ++ P+V HY+CM+D+LGR G L EA +
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
LI S+P +P A I+GSLL + R++K +EL E+AA KLF +EP N+ N+VLLSNIYA +
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
W+E+ R ++R VKK+ SW++ VH
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVH 513
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 147/313 (46%), Gaps = 40/313 (12%)
Query: 81 VISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYR 140
++ C+ G A++ K+ ++ + + L++ ++KCG ++ A+++FD + + R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM-LER 125
Query: 141 NSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMI 200
+ VS N MI Y R N+M A+ +F EM
Sbjct: 126 SLVSWNTMIGLYTR-----------NRMESE--------------------ALDIFLEM- 153
Query: 201 STNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN-EYQIKLSILGYNSLIFMYSRCGS 259
K E T+ SV SACG + +L + L+ + I L++ +L+ +Y++CG
Sbjct: 154 RNEGFKFSEFTISSVLSACG-VNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGM 212
Query: 260 MEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTA 319
+++A +F+ M + V+++++++G + + E + L + + +E ++ T ++ A
Sbjct: 213 IKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICA 272
Query: 320 CSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGI 375
CS+ L EG+++ I +V + +DM + G L E+ +I S E + +
Sbjct: 273 CSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESY-IIFSEVQEKNLEL 331
Query: 376 YGSLLNATRIHKQ 388
+ ++++ H +
Sbjct: 332 WNTIISGFAKHAR 344
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/449 (37%), Positives = 260/449 (57%), Gaps = 14/449 (3%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
V T +V Y++ G ++ A+ FD + E++ VSWN++L GY +SG E R+F+ +
Sbjct: 139 VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI-- 196
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
E D +W +ISS + GD A S+ + +K +++ + L+ + C +K
Sbjct: 197 --PEKDAVSWNLIISSYAKKGDMGNACSLFSAM-PLKSPASWNI---LIGGYVNCREMKL 250
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
A+ FD + +N VS MIS Y +LGD+ A +LF M ++D + +++MIA Y QNG+
Sbjct: 251 ARTYFDAMP-QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGK 309
Query: 189 SLMAIKLFKEMISTNDS-KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
A+KLF +M+ N +PDE+T+ SV SA LG+ S G W S + E+ IK+ L
Sbjct: 310 PKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLS 369
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
SLI +Y + G +A +F + +D VSY+ +I G +G E L + M E I
Sbjct: 370 TSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIP 429
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKL 363
P+ +T+ G+L+A SH+GL++EG K F S+K P DHY M+DMLGR G+LEEA +L
Sbjct: 430 PNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYEL 489
Query: 364 IHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRW 423
I SMPM+P+AG++G+LL A+ +H VE GE+A + +E + L+ IY+ GRW
Sbjct: 490 IKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRW 549
Query: 424 KEVGNVRNIMRKQGVKKITAWSWVEHPSH 452
+ VR+ ++++ + K SWVE H
Sbjct: 550 DDARTVRDSIKEKKLCKTLGCSWVEGSYH 578
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 149/333 (44%), Gaps = 74/333 (22%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
++N V+W +++ GY +SG L AR FDK+PE+ VSWN ++S YA+ G LF+
Sbjct: 167 EKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSA 226
Query: 66 M---------------------------LSSGNEPDETTWVTVISSCSSLGDPCLAESIV 98
M + + + +W+T+IS + LGD AE +
Sbjct: 227 MPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 99 RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNS------VSCNAMISAY 152
R + K + V A++ + + G K A ++F Q+ + RNS ++ ++++SA
Sbjct: 287 RLMSK----KDKLVYDAMIACYTQNGKPKDALKLFAQM-LERNSYIQPDEITLSSVVSAN 341
Query: 153 ARLGDLSF-----------------------------------ARDLFNKMPERDTVSWN 177
++LG+ SF A +F+ + ++DTVS++
Sbjct: 342 SQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYS 401
Query: 178 SMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE 237
+MI G NG + A LF MI P+ +T + SA H G + G + + +
Sbjct: 402 AMIMGCGINGMATEANSLFTAMIEKK-IPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD 460
Query: 238 YQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
+ ++ S Y ++ M R G +EEA + + M
Sbjct: 461 HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSM 493
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 289 bits (739), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/452 (35%), Positives = 260/452 (57%), Gaps = 22/452 (4%)
Query: 24 NLKTARIYFDKMPERSVVSWNAMLSGYAQSG--AALETVRLFNDMLSSGN-EPDETTWVT 80
+L A F++MP+R+ SWN ++ G+++S AL + LF +M+S EP+ T+ +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 81 VISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYR 140
V+ +C+ G + I K F + FV + L+ M+ CG +K A+ +F + + +
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 141 NSVSC-------------NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+ V N MI Y RLGD AR LF+KM +R VSWN+MI+GY+ NG
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
A+++F+EM D +P+ +T+VSV A LGSL LG W + I++ +
Sbjct: 254 FFKDAVEVFREM-KKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
++LI MYS+CG +E+A +F+ + ++++++ +I+G A HG + I KM++ G+
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMK 362
P + YI +LTACSH GL+EEG++ F + P ++HY CM+D+LGR G L+EA +
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
I +MP++P I+ +LL A R+ VE+G+ A L + PH+S YV LSN+YA G
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
W EV +R M+++ ++K S ++ +H
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLH 524
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 164/348 (47%), Gaps = 38/348 (10%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
+V W M+ GY + G+ K AR+ FDKM +RSVVSWN M+SGY+ +G + V +F +M
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKK 267
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
P+ T V+V+ + S LG L E + + + + +AL+DM++KCG ++
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
A +F++L P + ++W++MI G+A +G+
Sbjct: 328 AIHVFERL--------------------------------PRENVITWSAMINGFAIHGQ 355
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVS-ILNEYQIKLSILGY 247
+ AI F +M +P ++ +++ +AC H G + G S +++ ++ I Y
Sbjct: 356 AGDAIDCFCKMRQAG-VRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY 414
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
++ + R G ++EA M + D V + L+ G+ +E K ++ + D +
Sbjct: 415 GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN-VEMGKRVANILMDMV 473
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIKVPDV--DHYACMIDMLG 352
D Y+ + + G E ++ +K D+ D +ID+ G
Sbjct: 474 PHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDG 521
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 288 bits (738), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 165/459 (35%), Positives = 262/459 (57%), Gaps = 41/459 (8%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMP--ERSVVSWNAMLSGYAQSGAALETVRLFND 65
V T ++ Y K G+L +A++ F+ + +R+VVSWN+M Y+ G A + L+
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCL 246
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
ML +PD +T++ + +SC + E++ + G
Sbjct: 247 MLREEFKPDLSTFINLAASCQN------PETLTQ------------------------GR 276
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
L + I LG ++ + N IS Y++ D AR LF+ M R VSW MI+GYA+
Sbjct: 277 LIHSHAI--HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL-SI 244
G+ A+ LF MI + + KPD +T++S+ S CG GSL G W + + Y K ++
Sbjct: 335 KGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNV 393
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
+ N+LI MYS+CGS+ EA IF + +V++ T+I+G A +G +E +KL SKM +
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL 453
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEE 359
+P+ IT++ +L AC+H+G LE+G + F +K P +DHY+CM+D+LGR GKLEE
Sbjct: 454 DYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEE 513
Query: 360 AMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
A++LI +M +P AGI+G+LLNA +IH+ V++ E AA LF +EP ++ YV ++NIYA
Sbjct: 514 ALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAA 573
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVHCETI 458
AG W +R+IM+++ +KK S ++ H T+
Sbjct: 574 AGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTV 612
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 169/377 (44%), Gaps = 58/377 (15%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V T V + K ++ A F++MPER +WNAMLSG+ QSG + LF +M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ PD T +T+I S S F K+ L L+
Sbjct: 146 LNEITPDSVTVMTLIQSAS------------------------FEKSLKL--------LE 173
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP--ERDTVSWNSMIAGYAQ 185
A + +LGV N IS Y + GDL A+ +F + +R VSWNSM Y+
Sbjct: 174 AMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV 233
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL--- 242
GE+ A L+ M+ + KPD T +++ ++C + +L+ G +++ + I L
Sbjct: 234 FGEAFDAFGLYCLMLR-EEFKPDLSTFINLAASCQNPETLTQG----RLIHSHAIHLGTD 288
Query: 243 -SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
I N+ I MYS+ A L+F M +R VS+ +ISG A G E + L M
Sbjct: 289 QDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAM 348
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYAC----------MIDML 351
+ G +PD +T + +++ C G LE G+ + D Y C +IDM
Sbjct: 349 IKSGEKPDLVTLLSLISGCGKFGSLETGKWI-----DARADIYGCKRDNVMICNALIDMY 403
Query: 352 GRVGKLEEAMKLIHSMP 368
+ G + EA + + P
Sbjct: 404 SKCGSIHEARDIFDNTP 420
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 139/298 (46%), Gaps = 39/298 (13%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIV 98
SV +WN + +E++ LF +M G EP+ T+ V +C+ L D E +
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 99 RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDL 158
L K F S+ FV TA +DM KC ++ A ++F+++ R++ + NAM+S
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP-ERDATTWNAMLS-------- 126
Query: 159 SFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA 218
G+ Q+G + A LF+EM N+ PD +T++++ +
Sbjct: 127 -----------------------GFCQSGHTDKAFSLFREM-RLNEITPDSVTVMTLIQS 162
Query: 219 CGHLGSLSL--GIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQ--EMATRD 274
SL L + AV I +++++ N+ I Y +CG ++ A L+F+ + R
Sbjct: 163 ASFEKSLKLLEAMHAVGIRLGVDVQVTVA--NTWISTYGKCGDLDSAKLVFEAIDRGDRT 220
Query: 275 LVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
+VS+N++ + G + L M + +PD T+I + +C + L +G+ +
Sbjct: 221 VVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 278
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/445 (34%), Positives = 262/445 (58%), Gaps = 7/445 (1%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
V+ T + + SG++ A + K+ + WN ++ G++ S +++ ++ ML
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 102
Query: 70 GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
G PD T+ ++ S S L + L S+ + K + F+ L+ M+ + +A
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
+++FD++ ++N V+ N+++ AYA+ GD+ AR +F++M ERD V+W+SMI GY + GE
Sbjct: 163 RKLFDEMP-HKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 221
Query: 190 LMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS 249
A+++F +M+ SK +E+TMVSV AC HLG+L+ G + + + L+++ S
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 250 LIFMYSRCGSMEEATLIFQEMATR--DLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
LI MY++CGS+ +A +F + + D + +N +I GLASHG E ++L KM+E I+
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKL 363
PD IT++ +L ACSH GL++E F+S+K P +HYACM+D+L R G +++A
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDF 401
Query: 364 IHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRW 423
I MP++P + G+LLN H +EL E KL ++PHN YV L+N+YA+ ++
Sbjct: 402 ISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQF 461
Query: 424 KEVGNVRNIMRKQGVKKITAWSWVE 448
+ ++R M K+GVKKI S ++
Sbjct: 462 RAARSMREAMEKKGVKKIAGHSILD 486
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 147/287 (51%), Gaps = 33/287 (11%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P +N+VTW +++ YAKSG++ +AR+ FD+M ER VV+W++M+ GY + G + + +F+
Sbjct: 170 PHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFD 229
Query: 65 DMLSSG-NEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M+ G ++ +E T V+VI +C+ LG +++ R + V ++T+L+DM+AKC
Sbjct: 230 QMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKC 289
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G++ A +F YR SV E D + WN++I G
Sbjct: 290 GSIGDAWSVF-----YRASVK-------------------------ETDALMWNAIIGGL 319
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
A +G +++LF +M + PDE+T + + +AC H G + L E +
Sbjct: 320 ASHGFIRESLQLFHKMRESK-IDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPK 378
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS-YNTLISGLASHG 289
Y ++ + SR G +++A EM + S L++G +HG
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHG 425
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 266/443 (60%), Gaps = 10/443 (2%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T MV K ++ A F+++ +V +N+++ Y + + +R++ +L E
Sbjct: 46 TKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFE 105
Query: 73 -PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
PD T+ + SC+SLG L + + L K + + AL+DM+ K +L A +
Sbjct: 106 LPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHK 165
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+FD++ R+ +S N+++S YARLG + A+ LF+ M ++ VSW +MI+GY G +
Sbjct: 166 VFDEM-YERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY-NSL 250
A+ F+EM +PDE++++SV +C LGSL LG W + + E + L G N+L
Sbjct: 225 AMDFFREM-QLAGIEPDEISLISVLPSCAQLGSLELGKW-IHLYAERRGFLKQTGVCNAL 282
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
I MYS+CG + +A +F +M +D++S++T+ISG A HG+ I+ ++M+ ++P+
Sbjct: 283 IEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNG 342
Query: 311 ITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIH 365
IT++G+L+ACSH G+ +EG + F+ ++ P ++HY C+ID+L R GKLE A+++
Sbjct: 343 ITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITK 402
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
+MPM+P + I+GSLL++ R +++ +A L +EP + NYVLL+NIYA G+W++
Sbjct: 403 TMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWED 462
Query: 426 VGNVRNIMRKQGVKKITAWSWVE 448
V +R ++R + +KK S +E
Sbjct: 463 VSRLRKMIRNENMKKTPGGSLIE 485
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 180/427 (42%), Gaps = 107/427 (25%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQ------------ 52
P+ +VVT ++ Y K +L A FD+M ER V+SWN++LSGYA+
Sbjct: 140 PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFH 199
Query: 53 -------------------SGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCL 93
G +E + F +M +G EPDE + ++V+ SC+ LG L
Sbjct: 200 LMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLEL 259
Query: 94 AESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYA 153
+ I ++ F V AL++M++KCG + A ++F Q+ ++ +S + MIS YA
Sbjct: 260 GKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEG-KDVISWSTMISGYA 318
Query: 154 RLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMV 213
G+ A + FN+M +R V KP+ +T +
Sbjct: 319 YHGNAHGAIETFNEM-QRAKV-------------------------------KPNGITFL 346
Query: 214 SVFSACGHLGSLSLGIWAVSIL-NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMAT 272
+ SAC H+G G+ ++ +YQI+ I Y LI + +R G +E A I + M
Sbjct: 347 GLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMP- 405
Query: 273 RDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
++PD + +L++C G L+
Sbjct: 406 ---------------------------------MKPDSKIWGSLLSSCRTPGNLDVALVA 432
Query: 333 FE---SIKVPDVDHYACMIDMLGRVGKLEEA---MKLIHSMPMEPHAGIYGSLLNATRIH 386
+ ++ D+ +Y + ++ +GK E+ K+I + M+ G GSL+ I
Sbjct: 433 MDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPG--GSLIEVNNIV 490
Query: 387 KQVELGE 393
++ G+
Sbjct: 491 QEFVSGD 497
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 35/266 (13%)
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
G+ ++S M+ ++ D+ +A LFN++ + +NS+I Y N I+++
Sbjct: 37 GLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIY 96
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSR 256
K+++ + PD T +F +C LGS LG L ++ + ++ N+LI MY +
Sbjct: 97 KQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMK 156
Query: 257 CGSMEEATLIFQEMATRDLVSYNTLISGLASHGH-------------------------- 290
+ +A +F EM RD++S+N+L+SG A G
Sbjct: 157 FDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGY 216
Query: 291 -GIEC----IKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDV 341
GI C + +M+ GIEPD I+ I +L +C+ G LE G+ + + +
Sbjct: 217 TGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQT 276
Query: 342 DHYACMIDMLGRVGKLEEAMKLIHSM 367
+I+M + G + +A++L M
Sbjct: 277 GVCNALIEMYSKCGVISQAIQLFGQM 302
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 246/447 (55%), Gaps = 38/447 (8%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T +V YAK G+L+TAR FD M ER+VVSWN+M+ Y Q+ E + +F ML G +
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
P + + + + +C+ LGD L++ +F ++
Sbjct: 335 PTDVSVMGALHACADLGD----------LERGRF----------------------IHKL 362
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
+LG+ RN N++IS Y + ++ A +F K+ R VSWN+MI G+AQNG + A
Sbjct: 363 SVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDA 422
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
+ F +M S KPD T VSV +A L W ++ + ++ +L+
Sbjct: 423 LNYFSQMRSRT-VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVD 481
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MY++CG++ A LIF M+ R + ++N +I G +HG G ++L +M++ I+P+ +T
Sbjct: 482 MYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVT 541
Query: 313 YIGILTACSHAGLLEEGQKVFESIKVP-----DVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++ +++ACSH+GL+E G K F +K +DHY M+D+LGR G+L EA I M
Sbjct: 542 FLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVG 427
P++P +YG++L A +IHK V E AA +LF + P + +VLL+NIY A W++VG
Sbjct: 602 PVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVG 661
Query: 428 NVRNIMRKQGVKKITAWSWVEHPSHVH 454
VR M +QG++K S VE + VH
Sbjct: 662 QVRVSMLRQGLRKTPGCSMVEIKNEVH 688
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 161/320 (50%), Gaps = 37/320 (11%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T +V+ + + G++ A F+ + + V ++ ML G+A+ + ++ F M E
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
P + ++ C + + + I L K F + F T L +M+AKC + A+++
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
FD +MPERD VSWN+++AGY+QNG + MA
Sbjct: 193 FD--------------------------------RMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSL 250
+++ K M N KP +T+VSV A L +S+G I ++ + + ++I +L
Sbjct: 221 LEMVKSMCEEN-LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI--STAL 277
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
+ MY++CGS+E A +F M R++VS+N++I + + E + + KM ++G++P
Sbjct: 278 VDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 311 ITYIGILTACSHAGLLEEGQ 330
++ +G L AC+ G LE G+
Sbjct: 338 VSVMGALHACADLGDLERGR 357
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 140/284 (49%), Gaps = 35/284 (12%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
RNV ++++ Y K + TA F K+ R++VSWNAM+ G+AQ+G ++ + F+ M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
S +PD T+V+VI++ + L A+ I + + N FV TAL+DM+AKCG +
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
A+ IFD + R+ + NAMI GY +
Sbjct: 490 MIARLIFDMMS-ERHVTTWNAMID-------------------------------GYGTH 517
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLSIL 245
G A++LF+EM KP+ +T +SV SAC H G + G+ ++ E Y I+LS+
Sbjct: 518 GFGKAALELFEEM-QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVS-YNTLISGLASH 288
Y +++ + R G + EA +M + V+ Y ++ H
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 133/272 (48%), Gaps = 17/272 (6%)
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNS 178
+C +LK ++I + G+Y+ ++S + R G + A +F + + V +++
Sbjct: 46 RCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHT 105
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
M+ G+A+ + A++ F M +D +P + CG L +G +L +
Sbjct: 106 MLKGFAKVSDLDKALQFFVRM-RYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS 164
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
L + L MY++C + EA +F M RDLVS+NT+++G + +G ++++
Sbjct: 165 GFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMV 224
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV--------FESIKVPDVDHYACMIDM 350
M E+ ++P IT + +L A S L+ G+++ F+S+ V+ ++DM
Sbjct: 225 KSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL----VNISTALVDM 280
Query: 351 LGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNA 382
+ G LE A +L M +E + + S+++A
Sbjct: 281 YAKCGSLETARQLFDGM-LERNVVSWNSMIDA 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 11/170 (6%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+NV T +V YAK G + AR+ FD M ER V +WNAM+ GY G + LF +M
Sbjct: 471 KNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM 530
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKT------ALLDMH 120
+P+ T+++VIS+CS G L E+ ++ +K NY ++ A++D+
Sbjct: 531 QKGTIKPNGVTFLSVISACSHSG---LVEAGLKCFYMMK--ENYSIELSMDHYGAMVDLL 585
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE 170
+ G L A + Q+ V AM+ A +++FA ++ E
Sbjct: 586 GRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 153/439 (34%), Positives = 248/439 (56%), Gaps = 36/439 (8%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ YA+ G L+ + FD+M R ++SWN+++ Y + L + LF +M S +PD
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPD 347
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
T +++ S S LGD R + +F++ +
Sbjct: 348 CLTLISLASILSQLGDI----RACRSVQGFTLRKGWFLEDITIG---------------- 387
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
NA++ YA+LG + AR +FN +P D +SWN++I+GYAQNG + AI+
Sbjct: 388 -----------NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIE 436
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
++ M + ++ T VSV AC G+L G+ L + + L + SL MY
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY 496
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
+CG +E+A +F ++ + V +NTLI+ HGHG + + L +M ++G++PD IT++
Sbjct: 497 GKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFV 556
Query: 315 GILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
+L+ACSH+GL++EGQ FE ++ P + HY CM+DM GR G+LE A+K I SM +
Sbjct: 557 TLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSL 616
Query: 370 EPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNV 429
+P A I+G+LL+A R+H V+LG++A+ LF VEP + +VLLSN+YA AG+W+ V +
Sbjct: 617 QPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEI 676
Query: 430 RNIMRKQGVKKITAWSWVE 448
R+I +G++K WS +E
Sbjct: 677 RSIAHGKGLRKTPGWSSME 695
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 156/314 (49%), Gaps = 38/314 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++ +V YAK G + +AR F+ +P V+SWN ++SGYAQ+G A E + ++N M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 68 SSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
G ++ TWV+V+ +CS G + +L K + + FV T+L DM+ KCG L
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
+ A +F Q+ P ++V WN++IA + +
Sbjct: 503 EDALSLFYQI--------------------------------PRVNSVPWNTLIACHGFH 530
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN-EYQIKLSIL 245
G A+ LFKEM+ KPD +T V++ SAC H G + G W ++ +Y I S+
Sbjct: 531 GHGEKAVMLFKEMLDEG-VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKED 304
Y ++ MY R G +E A + M+ + D + L+S HG+ ++ K+ S+ +
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN-VDLGKIASEHLFE 648
Query: 305 GIEPDRITYIGILT 318
+EP+ + Y +L+
Sbjct: 649 -VEPEHVGYHVLLS 661
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 173/368 (47%), Gaps = 46/368 (12%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN-D 65
+NV +V Y GN+ AR FD + R V +WN M+SGY ++G + E +R F+
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
MLSSG PD T+ +V+ +C ++ +D K H C
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTV------------IDGNKIH---------------CLA 176
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
LK G + ++I Y+R + AR LF++MP RD SWN+MI+GY Q
Sbjct: 177 LK--------FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
+G + A+ L S D +T+VS+ SAC G + G+ S ++ ++ +
Sbjct: 229 SGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELF 283
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
N LI +Y+ G + + +F M RDL+S+N++I + + I L +M+
Sbjct: 284 VSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSR 343
Query: 306 IEPDRITYIGILTACSHAGLLE-----EGQKVFESIKVPDVDHYACMIDMLGRVGKLEEA 360
I+PD +T I + + S G + +G + + + D+ ++ M ++G ++ A
Sbjct: 344 IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSA 403
Query: 361 MKLIHSMP 368
+ + +P
Sbjct: 404 RAVFNWLP 411
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 152/340 (44%), Gaps = 42/340 (12%)
Query: 123 CGNLKAAQEIFDQLGVYR---NSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
C NL++A+ + +L V + N +++ Y LG+++ AR F+ + RD +WN M
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACG--------HLGSLSLG-IW 230
I+GY + G S I+ F + ++ PD T SV AC H +L G +W
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMW 183
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGH 290
V + SLI +YSR ++ A ++F EM RD+ S+N +ISG G+
Sbjct: 184 DVYVA------------ASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGN 231
Query: 291 GIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFE-SIK---VPDVDHYAC 346
E + L + ++ D +T + +L+AC+ AG G + SIK ++
Sbjct: 232 AKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK 287
Query: 347 MIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGE--LAAAKLFTVEP 404
+ID+ G+L + K+ M + L++ I K EL E L A LF E
Sbjct: 288 LIDLYAEFGRLRDCQKVFDRMYVR-------DLISWNSIIKAYELNEQPLRAISLFQ-EM 339
Query: 405 HNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAW 444
S + +LA ++G++R QG W
Sbjct: 340 RLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW 379
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 286 bits (731), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 258/466 (55%), Gaps = 42/466 (9%)
Query: 23 GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVI 82
G LK A FD++P+ V N +L G AQS +TV L+ +M G PD T+ V+
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 83 SSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG----- 137
+CS L + K+ + F N +VK AL+ HA CG+L A E+FD
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 138 -------------------------VYRNSVSCNAMISAYARLGDLSFARDLFNKMPERD 172
Y++ V+ N MI+ + ++ AR+LF++ E+D
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WA 231
V+WN+MI+GY G A+ +FKEM + PD +T++S+ SAC LG L G
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGE-HPDVVTILSLLSACAVLGDLETGKRLH 298
Query: 232 VSILNEYQIKLSI-LG---YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLAS 287
+ IL + SI +G +N+LI MY++CGS++ A +F+ + RDL ++NTLI GLA
Sbjct: 299 IYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLAL 358
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVD 342
H H I++ +M+ + P+ +T+IG++ ACSH+G ++EG+K F ++ P++
Sbjct: 359 H-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIK 417
Query: 343 HYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTV 402
HY CM+DMLGR G+LEEA + SM +EP+A ++ +LL A +I+ VELG+ A KL ++
Sbjct: 418 HYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM 477
Query: 403 EPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
S +YVLLSNIYA G+W V VR + VKK T S +E
Sbjct: 478 RKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 145/293 (49%), Gaps = 41/293 (13%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P ++ V W M+TG K + +AR FD+ E+ VV+WNAM+SGY G E + +F
Sbjct: 205 PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFK 264
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESI-VRKLDKVKFHSNYFVKT----ALLDM 119
+M +G PD T ++++S+C+ LGD + + + L+ S+ +V T AL+DM
Sbjct: 265 EMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDM 324
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
+AKCG++ A E+ F + +RD +WN++
Sbjct: 325 YAKCGSIDRAIEV--------------------------------FRGVKDRDLSTWNTL 352
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-Y 238
I G A + + +I++F+EM P+E+T + V AC H G + G S++ + Y
Sbjct: 353 IVGLALH-HAEGSIEMFEEMQRLK-VWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMY 410
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGH 290
I+ +I Y ++ M R G +EEA + + M + + + TL+ +G+
Sbjct: 411 NIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGN 463
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 285 bits (729), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/439 (35%), Positives = 246/439 (56%), Gaps = 60/439 (13%)
Query: 23 GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVI 82
G + +A F +M E++VV W +M++GY + + R F+ LS E D W T+I
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFD--LSP--ERDIVLWNTMI 97
Query: 83 SSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNS 142
S + + GN+ A+ +FDQ+ R+
Sbjct: 98 SG-----------------------------------YIEMGNMLEARSLFDQMPC-RDV 121
Query: 143 VSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIST 202
+S N ++ YA +GD+ +F+ MPER+ SWN +I GYAQNG + FK M+
Sbjct: 122 MSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDE 181
Query: 203 NDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN--------SLIFMY 254
P++ TM V SAC LG+ G W +++Y LGYN +LI MY
Sbjct: 182 GSVVPNDATMTLVLSACAKLGAFDFGKW----VHKYG---ETLGYNKVDVNVKNALIDMY 234
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
+CG++E A +F+ + RDL+S+NT+I+GLA+HGHG E + L +MK GI PD++T++
Sbjct: 235 GKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFV 294
Query: 315 GILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
G+L AC H GL+E+G F S+ +P+++H C++D+L R G L +A++ I+ MP+
Sbjct: 295 GVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPV 354
Query: 370 EPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNV 429
+ A I+ +LL A++++K+V++GE+A +L +EP N +N+V+LSNIY AGR+ + +
Sbjct: 355 KADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARL 414
Query: 430 RNIMRKQGVKKITAWSWVE 448
+ MR G KK SW+E
Sbjct: 415 KVAMRDTGFKKEAGVSWIE 433
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 149/313 (47%), Gaps = 68/313 (21%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDK------------------------------ 34
P+R++V W TM++GY + GN+ AR FD+
Sbjct: 86 PERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFD 145
Query: 35 -MPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN-EPDETTWVTVISSCSSLGDPC 92
MPER+V SWN ++ GYAQ+G E + F M+ G+ P++ T V+S+C+ LG
Sbjct: 146 DMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFD 205
Query: 93 LAESIVRKLDKVKFHS-NYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
+ + + + + ++ + VK AL+DM+ KCG ++ A E+F G+ R
Sbjct: 206 FGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFK--GIKR----------- 252
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
RDL +SWN+MI G A +G A+ LF EM ++ S PD++T
Sbjct: 253 ----------RDL---------ISWNTMINGLAAHGHGTEALNLFHEMKNSGIS-PDKVT 292
Query: 212 MVSVFSACGHLGSLSLGI-WAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
V V AC H+G + G+ + S+ ++ I I ++ + SR G + +A +M
Sbjct: 293 FVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKM 352
Query: 271 ATR-DLVSYNTLI 282
+ D V + TL+
Sbjct: 353 PVKADAVIWATLL 365
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 47/258 (18%)
Query: 116 LLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVS 175
L M G + +A ++F ++ V +N V +MI+ Y DL AR F+ PERD V
Sbjct: 34 LFGMLCLMGVIASANKVFCEM-VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVL 92
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL 235
WN+MI+GY + G L A LF +M +
Sbjct: 93 WNTMISGYIEMGNMLEARSLFDQMPCRD-------------------------------- 120
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECI 295
++ +N+++ Y+ G ME +F +M R++ S+N LI G A +G E +
Sbjct: 121 --------VMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVL 172
Query: 296 KLISKMKEDG-IEPDRITYIGILTACSHAGLLEEGQKVFE-----SIKVPDVDHYACMID 349
+M ++G + P+ T +L+AC+ G + G+ V + DV+ +ID
Sbjct: 173 GSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALID 232
Query: 350 MLGRVGKLEEAMKLIHSM 367
M G+ G +E AM++ +
Sbjct: 233 MYGKCGAIEIAMEVFKGI 250
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 92/214 (42%), Gaps = 32/214 (14%)
Query: 2 MGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVR 61
+G + +V ++ Y K G ++ A F + R ++SWN M++G A G E +
Sbjct: 217 LGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALN 276
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF++M +SG PD+ T+V V+ +C +G L E D + + ++ F +++
Sbjct: 277 LFHEMKNSGISPDKVTFVGVLCACKHMG---LVE------DGLAYFNSMFTDFSIMPEIE 327
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER-DTVSWNSMI 180
CG ++ +R G L+ A + NKMP + D V W +++
Sbjct: 328 HCG----------------------CVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVS 214
+ + +E+I P M+S
Sbjct: 366 GASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 285 bits (729), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 159/460 (34%), Positives = 256/460 (55%), Gaps = 41/460 (8%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
Q ++ + ++ Y+ G L+ AR FD++P+R++VSW +M+ GY +G AL+ V LF D
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKD 167
Query: 66 MLSSGNEPDETTW------VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
+L N+ D+ + V+VIS+CS + L ESI + K F V LLD
Sbjct: 168 LLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDA 227
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
+AK G G ++ AR +F+++ ++D VS+NS+
Sbjct: 228 YAKGGE------------------------------GGVAVARKIFDQIVDKDRVSYNSI 257
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQ 239
++ YAQ+G S A ++F+ ++ + +T+ +V A H G+L +G +
Sbjct: 258 MSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMG 317
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLIS 299
++ ++ S+I MY +CG +E A F M +++ S+ +I+G HGH + ++L
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 300 KMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRV 354
M + G+ P+ IT++ +L ACSHAGL EG + F ++K P ++HY CM+D+LGR
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 355 GKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLS 414
G L++A LI M M+P + I+ SLL A RIHK VEL E++ A+LF ++ N Y+LLS
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLS 497
Query: 415 NIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+IYA AGRWK+V VR IM+ +G+ K +S +E VH
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVH 537
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 168/351 (47%), Gaps = 51/351 (14%)
Query: 31 YFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGD 90
Y DK V SWN++++ A+SG + E + F+ M P +++ I +CSSL D
Sbjct: 35 YVDKT---DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFD 91
Query: 91 PCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMIS 150
+ ++ + S+ FV +AL+ M++ CG L+ A+++FD++
Sbjct: 92 IFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEI-------------- 137
Query: 151 AYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE-MISTNDSKP-- 207
P+R+ VSW SMI GY NG +L A+ LFK+ ++ ND
Sbjct: 138 ------------------PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAM 179
Query: 208 --DELTMVSVFSACGHLGS--LSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS--ME 261
D + +VSV SAC + + L+ I + I + +S+ N+L+ Y++ G +
Sbjct: 180 FLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSV--GNTLLDAYAKGGEGGVA 237
Query: 262 EATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTAC 320
A IF ++ +D VSYN+++S A G E ++ ++ K + + IT +L A
Sbjct: 238 VARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAV 297
Query: 321 SHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
SH+G L G+ + + + DV +IDM + G++E A K M
Sbjct: 298 SHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRM 348
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 164 LFNKMPER-DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHL 222
LFN+ ++ D SWNS+IA A++G+S A+ F M + P + AC L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLS-LYPTRSSFPCAIKACSSL 89
Query: 223 GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLI 282
+ G + + I ++LI MYS CG +E+A +F E+ R++VS+ ++I
Sbjct: 90 FDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMI 149
Query: 283 SGLASHGHGIECIKLISKM------KEDGIEPDRITYIGILTACS 321
G +G+ ++ + L + +D + D + + +++ACS
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 285 bits (728), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 154/425 (36%), Positives = 246/425 (57%), Gaps = 11/425 (2%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSL--GDPCLAES 96
+ VSW + ++ ++G E + F+DM +G EP+ T++ ++S C G L +
Sbjct: 35 TTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDL 94
Query: 97 IVRKLDKVKFHSNY-FVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARL 155
+ K+ N+ V TA++ M++K G K A+ +FD + +NSV+ N MI Y R
Sbjct: 95 LHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME-DKNSVTWNTMIDGYMRS 153
Query: 156 GDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSV 215
G + A +F+KMPERD +SW +MI G+ + G A+ F+EM + KPD + +++
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREM-QISGVKPDYVAIIAA 212
Query: 216 FSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL 275
+AC +LG+LS G+W + K ++ NSLI +Y RCG +E A +F M R +
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV 272
Query: 276 VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFES 335
VS+N++I G A++G+ E + KM+E G +PD +T+ G LTACSH GL+EEG + F+
Sbjct: 273 VSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI 332
Query: 336 IKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIH-KQV 389
+K P ++HY C++D+ R G+LE+A+KL+ SMPM+P+ + GSLL A H +
Sbjct: 333 MKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Query: 390 ELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEH 449
L E L + + SNYV+LSN+YA G+W+ +R M+ G+KK +S +E
Sbjct: 393 VLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEI 452
Query: 450 PSHVH 454
+H
Sbjct: 453 DDCMH 457
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 149/289 (51%), Gaps = 35/289 (12%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+N VTW TM+ GY +SG + A FDKMPER ++SW AM++G+ + G E + F +
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M SG +PD + +++C++LG + R + F +N V +L+D++ +CG
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
++ A+++F +N M +R VSWNS+I G+A
Sbjct: 257 VEFARQVF-------------------------------YN-MEKRTVVSWNSVIVGFAA 284
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN-EYQIKLSI 244
NG + ++ F++M KPD +T +AC H+G + G+ I+ +Y+I I
Sbjct: 285 NGNAHESLVYFRKM-QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRI 343
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGI 292
Y L+ +YSR G +E+A + Q M + + V +L++ ++HG+ I
Sbjct: 344 EHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNI 392
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 47/244 (19%)
Query: 166 NKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHL--G 223
N+ TVSW S I +NG A K F +M + +P+ +T +++ S CG G
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDM-TLAGVEPNHITFIALLSGCGDFTSG 87
Query: 224 SLSLGIWAVSILNEYQIKL-----------SILG-------------------------Y 247
S +LG +L+ Y KL +I+G +
Sbjct: 88 SEALG----DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTW 143
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N++I Y R G ++ A +F +M RDL+S+ +I+G G+ E + +M+ G++
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYA----CMIDMLGRVGKLEEAMKL 363
PD + I L AC++ G L G V + D + +ID+ R G +E A ++
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 364 IHSM 367
++M
Sbjct: 264 FYNM 267
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 105/204 (51%), Gaps = 15/204 (7%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ NV +++ Y + G ++ AR F M +R+VVSWN+++ G+A +G A E++ F
Sbjct: 238 KNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRK 297
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKT------ALLDM 119
M G +PD T+ +++CS +G L E +R +K +Y + L+D+
Sbjct: 298 MQEKGFKPDAVTFTGALTACSHVG---LVEEGLRYFQIMK--CDYRISPRIEHYGCLVDL 352
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLG-DLSFARDLFNKMPERDTVSWNS 178
+++ G L+ A ++ + + N V ++++A + G ++ A L + + + S ++
Sbjct: 353 YSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSN 412
Query: 179 MIA---GYAQNGESLMAIKLFKEM 199
+ YA +G+ A K+ ++M
Sbjct: 413 YVILSNMYAADGKWEGASKMRRKM 436
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 284 bits (726), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 250/441 (56%), Gaps = 8/441 (1%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
+ +++GYA G + +R FD+ R V+ WN+M+SGY + +E + LFN+M + E
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETRE 316
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
D T VI++C LG + + K + V + LLDM++KCG+ A ++
Sbjct: 317 -DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
F ++ Y +++ N+MI Y G + A+ +F ++ + +SWNSM G++QNG ++
Sbjct: 376 FSEVESY-DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVET 434
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
++ F +M D DE+++ SV SAC + SL LG + + + +SLI
Sbjct: 435 LEYFHQMHKL-DLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLID 493
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
+Y +CG +E +F M D V +N++ISG A++G G E I L KM GI P +IT
Sbjct: 494 LYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQIT 553
Query: 313 YIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++ +LTAC++ GL+EEG+K+FES+K VPD +H++CM+D+L R G +EEA+ L+ M
Sbjct: 554 FMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEM 613
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVG 427
P + ++ S+L + +G+ AA K+ +EP NS YV LS I+A +G W+
Sbjct: 614 PFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSA 673
Query: 428 NVRNIMRKQGVKKITAWSWVE 448
VR +MR+ V K SW +
Sbjct: 674 LVRKLMRENNVTKNPGSSWTD 694
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 205/427 (48%), Gaps = 68/427 (15%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P RN +W TM+ GY SG T+ +FD MPER SWN ++SG+A++G RLFN
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 65 DM-------LSS---------------------GNEPDETTWVTVISSCSSLGDPCLAES 96
M L+S D T TV+ +C+ L +
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQ 208
Query: 97 IVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLG 156
I ++ + + ++L++++AKCG+L+ A + +Q+ + S +A+IS YA G
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIR-EPDDHSLSALISGYANCG 267
Query: 157 DLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVF 216
++ +R LF++ R + WNSMI+GY N + A+ LF EM N+++ D T+ +V
Sbjct: 268 RVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM--RNETREDSRTLAAVI 325
Query: 217 SACGHLGSLSLG--------------------------------IWAVSILNEYQIKLSI 244
+AC LG L G + A + +E + +I
Sbjct: 326 NACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTI 385
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
L NS+I +Y CG +++A +F+ + + L+S+N++ +G + +G +E ++ +M +
Sbjct: 386 L-LNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKL 444
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH----YACMIDMLGRVGKLEEA 360
+ D ++ +++AC+ LE G++VF + +D + +ID+ + G +E
Sbjct: 445 DLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHG 504
Query: 361 MKLIHSM 367
++ +M
Sbjct: 505 RRVFDTM 511
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 76/334 (22%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+ + +M+ Y G + A+ F+++ +S++SWN+M +G++Q+G +ET+ F+ M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
DE + +VIS+C+S+ L E + + V S+ V ++L+D++ KCG ++
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+ +FD + V + V N+MIS YA NG
Sbjct: 503 HGRRVFDTM-VKSDEVPWNSMISGYA-------------------------------TNG 530
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+ AI LFK+M S +P ++T + V +AC +
Sbjct: 531 QGFEAIDLFKKM-SVAGIRPTQITFMVVLTACNY-------------------------- 563
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATR-----DLVSYNTLISGLASHGHGIECIKLISKMK 302
CG +EE +F+ M D ++ ++ LA G+ E I L+ +M
Sbjct: 564 ---------CGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESI 336
D D + IL C G G+K E I
Sbjct: 615 FD---VDGSMWSSILRGCVANGYKAMGKKAAEKI 645
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N ++ Y+R G + AR+LF++MP+R+ SWN+MI GY +GE +++ F M
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM-----P 120
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
+ D + V S G LS+ A + N K ++ NSL+ Y G EEA
Sbjct: 121 ERDGYSWNVVVSGFAKAGELSV---ARRLFNAMPEK-DVVTLNSLLHGYILNGYAEEALR 176
Query: 266 IFQEMA-TRDLVSYNTLISGLASHGHGIECIKLI-SKMKEDGIEPDRITYIGILTACSHA 323
+F+E+ + D ++ T++ A ++C K I +++ G+E D ++ +
Sbjct: 177 LFKELNFSADAITLTTVLKACAEL-EALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKC 235
Query: 324 GLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLI 364
G L + E I+ PD + +I G++ E+ L
Sbjct: 236 GDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLF 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 88/198 (44%), Gaps = 44/198 (22%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
V ++++ Y K G ++ R FD M + V WN+M+SGYA +G E + LF M +
Sbjct: 486 VVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA 545
Query: 70 GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
G P + T++ V+++C NY CG ++
Sbjct: 546 GIRPTQITFMVVLTAC-----------------------NY------------CGLVEEG 570
Query: 130 QEIFDQLGVYRNSV------SCNAMISAYARLGDLSFARDLFNKMP-ERDTVSWNSMIAG 182
+++F+ + V V SC M+ AR G + A +L +MP + D W+S++ G
Sbjct: 571 RKLFESMKVDHGFVPDKEHFSC--MVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRG 628
Query: 183 YAQNGESLMAIKLFKEMI 200
NG M K +++I
Sbjct: 629 CVANGYKAMGKKAAEKII 646
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 250/450 (55%), Gaps = 51/450 (11%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
++ Y K L A FD+MP+R+V+SW M+S Y++ + + L ML P
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRP 160
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLD----KVKFHSNYFVKTALLDMHAKCGNLKAA 129
+ T+ +V+ SC+ + D VR L K S+ FV++AL+D+
Sbjct: 161 NVYTYSSVLRSCNGMSD-------VRMLHCGIIKEGLESDVFVRSALIDV---------- 203
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
+A+LG+ A +F++M D + WNS+I G+AQN S
Sbjct: 204 ----------------------FAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 190 LMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS 249
+A++LFK M ++ T+ SV AC L L LG+ A + +Y L IL N+
Sbjct: 242 DVALELFKRMKRAG-FIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDL-ILN-NA 298
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
L+ MY +CGS+E+A +F +M RD+++++T+ISGLA +G+ E +KL +MK G +P+
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 310 RITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLI 364
IT +G+L ACSHAGLLE+G F S+K P +HY CMID+LG+ GKL++A+KL+
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Query: 365 HSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWK 424
+ M EP A + +LL A R+ + + L E AA K+ ++P ++ Y LLSNIYA + +W
Sbjct: 419 NEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWD 478
Query: 425 EVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
V +R MR +G+KK SW+E +H
Sbjct: 479 SVEEIRTRMRDRGIKKEPGCSWIEVNKQIH 508
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 136/281 (48%), Gaps = 37/281 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ +V + ++ +AK G + A FD+M + WN+++ G+AQ+ + + LF
Sbjct: 191 ESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKR 250
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M +G ++ T +V+ +C+ L L + + VK+ + + AL+DM+ KCG+
Sbjct: 251 MKRAGFIAEQATLTSVLRACTGLA--LLELGMQAHVHIVKYDQDLILNNALVDMYCKCGS 308
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
L+ A +F N+M ERD ++W++MI+G AQ
Sbjct: 309 LEDALRVF--------------------------------NQMKERDVITWSTMISGLAQ 336
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLSI 244
NG S A+KLF+ M S+ +KP+ +T+V V AC H G L G + + + Y I
Sbjct: 337 NGYSQEALKLFERMKSSG-TKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISG 284
Y +I + + G +++A + EM D V++ TL+
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 6/224 (2%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N +I+ Y + L+ A LF++MP+R+ +SW +MI+ Y++ A++L M+ N
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDN-V 158
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
+P+ T SV +C G + + I+ E ++ + ++LI ++++ G E+A
Sbjct: 159 RPNVYTYSSVLRSCN--GMSDVRMLHCGIIKE-GLESDVFVRSALIDVFAKLGEPEDALS 215
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGL 325
+F EM T D + +N++I G A + ++L +MK G ++ T +L AC+ L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 326 LEEGQKVFESIKVPDVDHYA--CMIDMLGRVGKLEEAMKLIHSM 367
LE G + I D D ++DM + G LE+A+++ + M
Sbjct: 276 LELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 252/447 (56%), Gaps = 39/447 (8%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFD--KMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+V ++ YAK L +AR F+ +PER++VSW A++S YAQ+G +E + +F+
Sbjct: 153 DVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M +PD V+V+++ + L D SI HA
Sbjct: 213 MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI----------------------HASV-- 248
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+K EI L +S N M YA+ G ++ A+ LF+KM + + WN+MI+GYA+
Sbjct: 249 VKMGLEIEPDL-----LISLNTM---YAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
NG + AI +F EMI+ D +PD +++ S SAC +GSL + + +
Sbjct: 301 NGYAREAIDMFHEMIN-KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVF 359
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
++LI M+++CGS+E A L+F RD+V ++ +I G HG E I L M+ G
Sbjct: 360 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 419
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESI---KV-PDVDHYACMIDMLGRVGKLEEAM 361
+ P+ +T++G+L AC+H+G++ EG F + K+ P HYAC+ID+LGR G L++A
Sbjct: 420 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 479
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAG 421
++I MP++P ++G+LL+A + H+ VELGE AA +LF+++P N+ +YV LSN+YA A
Sbjct: 480 EVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAAR 539
Query: 422 RWKEVGNVRNIMRKQGVKKITAWSWVE 448
W V VR M+++G+ K SWVE
Sbjct: 540 LWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 119/247 (48%), Gaps = 6/247 (2%)
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
CLA ++ + HS+ F +L+D LK LG+ + +I A
Sbjct: 6 CLASPLLYTNSGI--HSDSFY-ASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHA 62
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
+ GD++FAR +F+ +P WN++I GY++N A+ ++ M S PD T
Sbjct: 63 SSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS-PDSFT 121
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQ--E 269
+ AC L L +G + + + + N LI +Y++C + A +F+
Sbjct: 122 FPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP 181
Query: 270 MATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEG 329
+ R +VS+ ++S A +G +E +++ S+M++ ++PD + + +L A + L++G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 330 QKVFESI 336
+ + S+
Sbjct: 242 RSIHASV 248
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/443 (35%), Positives = 254/443 (57%), Gaps = 8/443 (1%)
Query: 24 NLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVIS 83
NL AR FD +N ++ Y E++ L+N + G P T+ + +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFA 90
Query: 84 SCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSV 143
+ +S + + + F S+ F T L+ +AK G L A+ +FD++ R+
Sbjct: 91 ASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMS-KRDVP 149
Query: 144 SCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTN 203
NAMI+ Y R GD+ A +LF+ MP ++ SW ++I+G++QNG A+K+F M
Sbjct: 150 VWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDK 209
Query: 204 DSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEA 263
KP+ +T+VSV AC +LG L +G E +I N+ I MYS+CG ++ A
Sbjct: 210 SVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVA 269
Query: 264 TLIFQEMAT-RDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSH 322
+F+E+ R+L S+N++I LA+HG E + L ++M +G +PD +T++G+L AC H
Sbjct: 270 KRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVH 329
Query: 323 AGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYG 377
G++ +GQ++F+S++ P ++HY CMID+LGRVGKL+EA LI +MPM+P A ++G
Sbjct: 330 GGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWG 389
Query: 378 SLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQG 437
+LL A H VE+ E+A+ LF +EP N N V++SNIYA +W V +R +M+K+
Sbjct: 390 TLLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKET 449
Query: 438 VKKITAWSW-VEHPSHVHCETIK 459
+ K +S+ VE VH T++
Sbjct: 450 MTKAAGYSYFVEVGVDVHKFTVE 472
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 145/285 (50%), Gaps = 12/285 (4%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
TT++T YAK G L AR FD+M +R V WNAM++GY + G + LF+ M
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM----PR 176
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVK-FHSNYFVKTALLDMHAKCGNLKAAQE 131
+ T+W TVIS S G+ A + ++K K N+ ++L A G L+ +
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRR 236
Query: 132 I---FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM-PERDTVSWNSMIAGYAQNG 187
+ + G + N CNA I Y++ G + A+ LF ++ +R+ SWNSMI A +G
Sbjct: 237 LEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHG 296
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLSILG 246
+ A+ LF +M+ + KPD +T V + AC H G + G + E ++I +
Sbjct: 297 KHDEALTLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGH 290
Y +I + R G ++EA + + M + D V + TL+ + HG+
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGN 400
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 256/449 (57%), Gaps = 41/449 (9%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T++ Y+K G+L +A+ F +M +RSVVS+ +M++GYA+ G A E V+LF +M G
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
PD T V++ C+ R LD+ K + + L +I
Sbjct: 395 PDVYTVTAVLNCCARY----------RLLDEGKRVHEWIKENDL------------GFDI 432
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
F VS NA++ YA+ G + A +F++M +D +SWN++I GY++N + A
Sbjct: 433 F---------VS-NALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEA 482
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSL 250
+ LF ++ PDE T+ V AC L + G I + N Y + NSL
Sbjct: 483 LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA--NSL 540
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
+ MY++CG++ A ++F ++A++DLVS+ +I+G HG G E I L ++M++ GIE D
Sbjct: 541 VDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 600
Query: 311 ITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIH 365
I+++ +L ACSH+GL++EG + F ++ P V+HYAC++DML R G L +A + I
Sbjct: 601 ISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIE 660
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
+MP+ P A I+G+LL RIH V+L E A K+F +EP N+ YVL++NIYA A +W++
Sbjct: 661 NMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQ 720
Query: 426 VGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
V +R + ++G++K SW+E V+
Sbjct: 721 VKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 176/356 (49%), Gaps = 37/356 (10%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y G+LK A FD++ + WN +++ A+SG ++ LF M+SSG E D T+
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
V S SSL E + + K F V +L+ + K + +A+++FD+
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE--- 255
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
M ERD +SWNS+I GY NG + + +F +
Sbjct: 256 -----------------------------MTERDVISWNSIINGYVSNGLAEKGLSVFVQ 286
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCG 258
M+ + + D T+VSVF+ C +SLG SI + N+L+ MYS+CG
Sbjct: 287 MLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCG 345
Query: 259 SMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILT 318
++ A +F+EM+ R +VSY ++I+G A G E +KL +M+E+GI PD T +L
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405
Query: 319 ACSHAGLLEEGQKVFESIKVPDV--DHYA--CMIDMLGRVGKLEEAMKLIHSMPME 370
C+ LL+EG++V E IK D+ D + ++DM + G ++EA + M ++
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 177/360 (49%), Gaps = 39/360 (10%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G +RN V ++V Y K+ + +AR FD+M ER V+SWN++++GY +G A + + +
Sbjct: 225 GFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSV 283
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F ML SG E D T V+V + C+ L ++ K F LLDM++K
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CG+L +A+ +F ++ R+ VS +MI+ YAR G +AG
Sbjct: 344 CGDLDSAKAVFREMS-DRSVVSYTSMIAGYAREG-----------------------LAG 379
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
A+KLF+EM S PD T+ +V + C L G + E +
Sbjct: 380 E--------AVKLFEEMEEEGIS-PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLIS-KM 301
I N+L+ MY++CGSM+EA L+F EM +D++S+NT+I G + + + E + L + +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKL 357
+E PD T +L AC+ ++G+++ I D ++DM + G L
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 170 ERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI 229
+R N+ + + ++G A+KL + + D T+ SV C SL G
Sbjct: 58 DRSVTDANTQLRRFCESGNLENAVKL---LCVSGKWDIDPRTLCSVLQLCADSKSLKDGK 114
Query: 230 WAVSIL--NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLAS 287
+ + N + I S LG + L MY+ CG ++EA+ +F E+ + +N L++ LA
Sbjct: 115 EVDNFIRGNGFVID-SNLG-SKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAK 172
Query: 288 HGHGIECIKLISKMKEDGIEPDRITY 313
G I L KM G+E D T+
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTF 198
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/431 (36%), Positives = 259/431 (60%), Gaps = 25/431 (5%)
Query: 43 WNAMLSGYAQSGAALE---TVRLFNDMLSSGNEPDETTWVTVISSCSS-----LGDPCLA 94
WN ++ + ++ + + ++ M + PD T+ ++ S + LG A
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 95 ESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYAR 154
+ ++ LDK + FV+T+LL+M++ CG+L++AQ +FD G ++ + N++++AYA+
Sbjct: 87 QILLFGLDK-----DPFVRTSLLNMYSSCGDLRSAQRVFDDSGS-KDLPAWNSVVNAYAK 140
Query: 155 LGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEM--ISTNDS--KPDEL 210
G + AR LF++MPER+ +SW+ +I GY G+ A+ LF+EM N++ +P+E
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 211 TMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
TM +V SACG LG+L G W + +++Y +++ I+ +LI MY++CGS+E A +F +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 271 ATR-DLVSYNTLISGLASHGHGIECIKLISKMK-EDGIEPDRITYIGILTACSHAGLLEE 328
++ D+ +Y+ +I LA +G EC +L S+M D I P+ +T++GIL AC H GL+ E
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 329 GQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNAT 383
G+ F+ + P + HY CM+D+ GR G ++EA I SMPMEP I+GSLL+ +
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 384 RIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITA 443
R+ ++ E A +L ++P NS YVLLSN+YA GRW EV +R+ M +G+ K+
Sbjct: 381 RMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPG 440
Query: 444 WSWVEHPSHVH 454
S+VE VH
Sbjct: 441 CSYVEVEGVVH 451
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 146/285 (51%), Gaps = 38/285 (13%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+++ W ++V YAK+G + AR FD+MPER+V+SW+ +++GY G E + LF +M
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185
Query: 67 -LSSGNE----PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
L NE P+E T TV+S+C LG + + +DK + + TAL+DM+A
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
KCG+L+ A+ +F+ LG ++D ++++MI
Sbjct: 246 KCGSLERAKRVFNALG-------------------------------SKKDVKAYSAMIC 274
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQI 240
A G + +LF EM ++++ P+ +T V + AC H G ++ G + ++ E+ I
Sbjct: 275 CLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGI 334
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISG 284
SI Y ++ +Y R G ++EA M D++ + +L+SG
Sbjct: 335 TPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 281 bits (719), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/451 (32%), Positives = 251/451 (55%), Gaps = 40/451 (8%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
++++GY+ SG A FD ++ VV+W AM+ G+ ++G+A E + F +M +G
Sbjct: 143 SLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAA 202
Query: 74 DETTWVTVISSCSSLGDPCLAESIV-RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
+E T V+V+ + + D S+ L+ + + F+ ++L+DM+ KC AQ++
Sbjct: 203 NEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKV 262
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
FD+ MP R+ V+W ++IAGY Q+
Sbjct: 263 FDE--------------------------------MPSRNVVTWTALIAGYVQSRCFDKG 290
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
+ +F+EM+ + D P+E T+ SV SAC H+G+L G + + I+++ +LI
Sbjct: 291 MLVFEEMLKS-DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLID 349
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
+Y +CG +EEA L+F+ + +++ ++ +I+G A+HG+ + L M + P+ +T
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVT 409
Query: 313 YIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++ +L+AC+H GL+EEG+++F S+K P DHYACM+D+ GR G LEEA LI M
Sbjct: 410 FMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVG 427
PMEP ++G+L + +HK ELG+ AA+++ ++P +S Y LL+N+Y+ + W EV
Sbjct: 470 PMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVA 529
Query: 428 NVRNIMRKQGVKKITAWSWVEHPSHVHCETI 458
VR M+ Q V K +SW+E + CE I
Sbjct: 530 RVRKQMKDQQVVKSPGFSWIEVKGKL-CEFI 559
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 133/258 (51%), Gaps = 9/258 (3%)
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
+ G+ + N++IS Y+ G FA LF+ ++D V+W +MI G+ +NG + A+
Sbjct: 131 KFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMV 190
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI-LNEYQIKLSILGYNSLIFM 253
F EM T + +E+T+VSV A G + + G + L ++K + +SL+ M
Sbjct: 191 YFVEMKKTGVA-ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDM 249
Query: 254 YSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITY 313
Y +C ++A +F EM +R++V++ LI+G + + + +M + + P+ T
Sbjct: 250 YGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTL 309
Query: 314 IGILTACSHAGLLEEGQKVF-----ESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
+L+AC+H G L G++V SI++ + +ID+ + G LEEA+ L+
Sbjct: 310 SSVLSACAHVGALHRGRRVHCYMIKNSIEI-NTTAGTTLIDLYVKCGCLEEAI-LVFERL 367
Query: 369 MEPHAGIYGSLLNATRIH 386
E + + +++N H
Sbjct: 368 HEKNVYTWTAMINGFAAH 385
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 132/269 (49%), Gaps = 34/269 (12%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G + +V +++V Y K A+ FD+MP R+VV+W A+++GY QS + + +
Sbjct: 234 GRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLV 293
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F +ML S P+E T +V+S+C+ +G + + K N T L+D++ K
Sbjct: 294 FEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CG L+ A +F++L +N + AMI+ +A G +ARD F+
Sbjct: 354 CGCLEEAILVFERLH-EKNVYTWTAMINGFAAHG---YARDAFD---------------- 393
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQIK 241
LF M+S++ S P+E+T ++V SAC H G + G +S+ + ++
Sbjct: 394 ------------LFYTMLSSHVS-PNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNME 440
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEM 270
Y ++ ++ R G +EEA + + M
Sbjct: 441 PKADHYACMVDLFGRKGLLEEAKALIERM 469
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N TT++ Y K G L+ A + F+++ E++V +W AM++G+A G A + LF ML
Sbjct: 340 NTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML 399
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVK----TALLDMHAKC 123
SS P+E T++ V+S+C+ G L E R +K N K ++D+ +
Sbjct: 400 SSHVSPNEVTFMAVLSACAHGG---LVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRK 456
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISA 151
G L+ A+ + +++ + +V A+ +
Sbjct: 457 GLLEEAKALIERMPMEPTNVVWGALFGS 484
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 281 bits (718), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 264/464 (56%), Gaps = 21/464 (4%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVRL 62
++VVT + ++ YA+ G L+ +M E ++VSWN +LSG+ +SG E V +
Sbjct: 180 KDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVM 239
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDP---CLAESIVRKLDKVKFHSNYFVKTALLDM 119
F + G PD+ VTV S S+GD + I + K + V +A++DM
Sbjct: 240 FQKIHHLGFCPDQ---VTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDM 296
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVS 175
+ K G++ +F+Q + V CNA I+ +R G + A ++F E+ + VS
Sbjct: 297 YGKSGHVYGIISLFNQFEMMEAGV-CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL 235
W S+IAG AQNG+ + A++LF+EM KP+ +T+ S+ ACG++ +L G
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECI 295
+ ++ ++LI MY++CG + + ++F M T++LV +N+L++G + HG E +
Sbjct: 415 VRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVM 474
Query: 296 KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDM 350
+ + ++PD I++ +L+AC GL +EG K F+ + P ++HY+CM+++
Sbjct: 475 SIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNL 534
Query: 351 LGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNY 410
LGR GKL+EA LI MP EP + ++G+LLN+ R+ V+L E+AA KLF +EP N Y
Sbjct: 535 LGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTY 594
Query: 411 VLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
VLLSNIYA G W EV ++RN M G+KK SW++ + V+
Sbjct: 595 VLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVY 638
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/428 (21%), Positives = 203/428 (47%), Gaps = 64/428 (14%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ Y+ A + +P+ ++ S+++++ ++ +++ +F+ M S G PD
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 75 ETTWVTVISSCSSL-----GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
+ C+ L G S V LD + FV+ ++ M+ +CG + A
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM-----DAFVQGSMFHMYMRCGRMGDA 170
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERDTVSWNSMIAGYAQ 185
+++FD++ ++ V+C+A++ AYAR G L + ++M E + VSWN +++G+ +
Sbjct: 171 RKVFDRMS-DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
+G A+ +F++ I PD++T+ SV + G L++G +++ Y IK +L
Sbjct: 230 SGYHKEAVVMFQK-IHHLGFCPDQVTVSSVLPSVGDSEMLNMG----RLIHGYVIKQGLL 284
Query: 246 G----YNSLIFMYSRCG-----------------------------------SMEEATLI 266
+++I MY + G ++E L
Sbjct: 285 KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELF 344
Query: 267 FQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLL 326
++ ++VS+ ++I+G A +G IE ++L +M+ G++P+ +T +L AC + L
Sbjct: 345 KEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAAL 404
Query: 327 EEGQKVFE-SIKVPDVDHY---ACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNA 382
G+ +++V +D+ + +IDM + G++ + + + MP + + + SL+N
Sbjct: 405 GHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLMNG 463
Query: 383 TRIHKQVE 390
+H + +
Sbjct: 464 FSMHGKAK 471
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 279 bits (714), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 250/422 (59%), Gaps = 7/422 (1%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F ++ ++ +N ++ ++ + + ML S PD T+ +I + S +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
+ E ++ + F ++ +V+ +L+ M+A CG + AA IF Q+G +R+ VS +M++
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMG-FRDVVSWTSMVAG 192
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
Y + G + AR++F++MP R+ +W+ MI GYA+N AI LF E + +E
Sbjct: 193 YCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLF-EFMKREGVVANETV 251
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
MVSV S+C HLG+L G A + + + ++++ +L+ M+ RCG +E+A +F+ +
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK 331
D +S++++I GLA HGH + + S+M G P +T+ +L+ACSH GL+E+G +
Sbjct: 312 ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLE 371
Query: 332 VFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIH 386
++E++K P ++HY C++DMLGR GKL EA I M ++P+A I G+LL A +I+
Sbjct: 372 IYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY 431
Query: 387 KQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSW 446
K E+ E L V+P +S YVLLSNIYA AG+W ++ ++R++M+++ VKK WS
Sbjct: 432 KNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSL 491
Query: 447 VE 448
+E
Sbjct: 492 IE 493
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 134/268 (50%), Gaps = 34/268 (12%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R+VV+WT+MV GY K G ++ AR FD+MP R++ +W+ M++GYA++ + + LF M
Sbjct: 181 RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
G +ET V+VISSC+ LG E + K N + TAL+DM +CG++
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
+ A +F+ L PE D++SW+S+I G A +
Sbjct: 301 EKAIHVFEGL--------------------------------PETDSLSWSSIIKGLAVH 328
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKLSIL 245
G + A+ F +MIS P ++T +V SAC H G + G+ ++ ++ I+ +
Sbjct: 329 GHAHKAMHYFSQMISLG-FIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATR 273
Y ++ M R G + EA +M +
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVK 415
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/461 (33%), Positives = 249/461 (54%), Gaps = 47/461 (10%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G RN V + +++ G G ++ A F M E+ VSW AM+ G AQ+G A E +
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F +M G + D+ + +V+ +C LG + I + + F + +V +AL+DM+ K
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
C C L +A+ +F++M +++ VSW +M+ G
Sbjct: 318 C--------------------KC------------LHYAKTVFDRMKQKNVVSWTAMVVG 345
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
Y Q G + A+K+F +M + PD T+ SAC ++ SL G S + I
Sbjct: 346 YGQTGRAEEAVKIFLDM-QRSGIDPDHYTLGQAISACANVSSLEEG----SQFHGKAITS 400
Query: 243 SILGY----NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
++ Y NSL+ +Y +CG ++++T +F EM RD VS+ ++S A G +E I+L
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLF 460
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGR 353
KM + G++PD +T G+++ACS AGL+E+GQ+ F+ + VP + HY+CMID+ R
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520
Query: 354 VGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLL 413
G+LEEAM+ I+ MP P A + +LL+A R +E+G+ AA L ++PH+ + Y LL
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLL 580
Query: 414 SNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
S+IYA G+W V +R MR++ VKK SW++ +H
Sbjct: 581 SSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLH 621
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 191/370 (51%), Gaps = 12/370 (3%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
PQ N+ +W ++ Y+K+G + F+K+P+R V+WN ++ GY+ SG V+ +N
Sbjct: 68 PQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYN 127
Query: 65 DMLSS-GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M+ T +T++ SS G L + I ++ K+ F S V + LL M+A
Sbjct: 128 TMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV 187
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G + A+++F L RN+V N+++ G + A LF M E+D+VSW +MI G
Sbjct: 188 GCISDAKKVFYGLDD-RNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGL 245
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIK 241
AQNG + AI+ F+EM K D+ SV ACG LG+++ G I A I +Q
Sbjct: 246 AQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
+ + ++LI MY +C + A +F M +++VS+ ++ G G E +K+ M
Sbjct: 305 IYV--GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYAC----MIDMLGRVGKL 357
+ GI+PD T ++AC++ LEEG + + HY ++ + G+ G +
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 358 EEAMKLIHSM 367
+++ +L + M
Sbjct: 423 DDSTRLFNEM 432
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 164/414 (39%), Gaps = 117/414 (28%)
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG-----ESLM-- 191
Y + N ++ AYA + ++AR +F+++P+ + SWN+++ Y++ G ES
Sbjct: 38 YPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEK 97
Query: 192 ------------------------AIKLFKEMI---STNDSKPDELTMVSVFSACGHLGS 224
A+K + M+ S N ++ +TM+ + S+ GH
Sbjct: 98 LPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGH--- 154
Query: 225 LSLGIWAVSILNEYQIKLSILGY----NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNT 280
+SLG ++ IKL Y + L++MY+ G + +A +F + R+ V YN+
Sbjct: 155 VSLG----KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNS 210
Query: 281 L------------------------------ISGLASHGHGIECIKLISKMKEDGIEPDR 310
L I GLA +G E I+ +MK G++ D+
Sbjct: 211 LMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQ 270
Query: 311 ITYIGILTACSHAGLLEEGQK-----------------------------------VFES 335
+ +L AC G + EG++ VF+
Sbjct: 271 YPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 336 IKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNATRIHKQVELG 392
+K +V + M+ G+ G+ EEA+K+ M ++P G ++A +E G
Sbjct: 331 MKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390
Query: 393 ELAAAKLFTVEPHNSSNYVLLSN-IYALAGRWKEVGNVRNIMRKQGVKKITAWS 445
K T +YV +SN + L G+ ++ + + + V+ +W+
Sbjct: 391 SQFHGKAIT---SGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 271/496 (54%), Gaps = 53/496 (10%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G + VV+ ++MV GY K G + AR FD+M ER+V++W AM+ GY ++G + L
Sbjct: 202 GMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGL 261
Query: 63 FNDMLSSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
F M G+ + + T + +C I + ++ + F+ +L+ M++
Sbjct: 262 FLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 122 KCGNLKAAQEIFDQLGVYRN--SVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
K G + A+ +F GV +N SVS N++I+ + +S A +LF KMP +D VSW M
Sbjct: 322 KLGYMGEAKAVF---GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDM 378
Query: 180 IAGYAQNGESLMAIKLF-----------KEMISTNDSK-------------------PDE 209
I G++ GE ++LF MIS S P+
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNS 438
Query: 210 LTMVSVFSACGHLGSLSLG------IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEA 263
T SV SA L L G + ++I+N+ ++ NSL+ MY +CG+ +A
Sbjct: 439 YTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQ------NSLVSMYCKCGNTNDA 492
Query: 264 TLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHA 323
IF ++ ++VSYNT+ISG + +G G + +KL S ++ G EP+ +T++ +L+AC H
Sbjct: 493 YKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHV 552
Query: 324 GLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGS 378
G ++ G K F+S+K P DHYACM+D+LGR G L++A LI +MP +PH+G++GS
Sbjct: 553 GYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGS 612
Query: 379 LLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGV 438
LL+A++ H +V+L ELAA KL +EP +++ YV+LS +Y++ G+ ++ + NI + + +
Sbjct: 613 LLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRI 672
Query: 439 KKITAWSWVEHPSHVH 454
KK SW+ VH
Sbjct: 673 KKDPGSSWIILKGEVH 688
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 15/382 (3%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAAL-ETVRLFN 64
R++V+W M++ YA++G + A FD+MP R S+NAM++ ++ L + LF
Sbjct: 78 NRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFC 137
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
D+ E + ++ T+I+ G AE + + VKF + LL + + G
Sbjct: 138 DI----PEKNAVSYATMITGFVRAGRFDEAEFLYAE-TPVKFRDS-VASNVLLSGYLRAG 191
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
A +F + V + VSC++M+ Y ++G + AR LF++M ER+ ++W +MI GY
Sbjct: 192 KWNEAVRVFQGMAV-KEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYF 250
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
+ G LF M D K + T+ +F AC G +++ ++ +
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL 310
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
NSL+ MYS+ G M EA +F M +D VS+N+LI+GL E +L KM
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK 370
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLI 364
D +++ ++ S G + + ++F + D + MI G EEA+
Sbjct: 371 ----DMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWF 426
Query: 365 HSMPME---PHAGIYGSLLNAT 383
H M + P++ + S+L+AT
Sbjct: 427 HKMLQKEVCPNSYTFSSVLSAT 448
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 141/340 (41%), Gaps = 55/340 (16%)
Query: 145 CNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEM---IS 201
CN+ IS +AR G+L A +F +M R VSW +MI+ YA+NG+ A ++F EM ++
Sbjct: 53 CNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVT 112
Query: 202 TNDS--------------KPDEL-------------TMVSVFSACGHLGSLSLGIWAVSI 234
T+ + K EL TM++ F G A +
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDE------AEFL 166
Query: 235 LNEYQIKL-SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIE 293
E +K + N L+ Y R G EA +FQ MA +++VS ++++ G G ++
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 294 CIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP-DV----DHYACMI 348
L +M E + IT+ ++ AG E+G +F ++ DV + A M
Sbjct: 227 ARSLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMF 282
Query: 349 DMLGRVGKLEEAMK---LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPH 405
+ E + L+ MP+E + L + + +LG + AK
Sbjct: 283 KACRDFVRYREGSQIHGLVSRMPLE-----FDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 406 NSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWS 445
N + S I L R K++ + K K + +W+
Sbjct: 338 NKDSVSWNSLITGLVQR-KQISEAYELFEKMPGKDMVSWT 376
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 167/456 (36%), Positives = 254/456 (55%), Gaps = 40/456 (8%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
R++ T ++++ Y+K G +K AR F +PE SVVS NA+++GY+Q+ E V LF +
Sbjct: 561 DRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQE 619
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSN-YFVKTALLDMHAKCG 124
ML+ G P E T+ T++ +C L ++ K F S ++ +LL
Sbjct: 620 MLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLL------- 672
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
G+Y NS M A A +LS + + V W M++G++
Sbjct: 673 ------------GMYMNS---RGMTEACALFSELSSPKSI---------VLWTGMMSGHS 708
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
QNG A+K +KEM + PD+ T V+V C L SL G S++ L
Sbjct: 709 QNGFYEEALKFYKEM-RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDE 767
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKE 303
L N+LI MY++CG M+ ++ +F EM R ++VS+N+LI+G A +G+ + +K+ M++
Sbjct: 768 LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQ 827
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLE 358
I PD IT++G+LTACSHAG + +G+K+FE + VDH ACM+D+LGR G L+
Sbjct: 828 SHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQ 887
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
EA I + ++P A ++ SLL A RIH GE++A KL +EP NSS YVLLSNIYA
Sbjct: 888 EADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYA 947
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
G W++ +R +MR +GVKK+ +SW++ H
Sbjct: 948 SQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTH 983
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 191/401 (47%), Gaps = 39/401 (9%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+RN +V YAK + AR F+ + + + V W + SGY ++G E V +F
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 66 MLSSGNEPDETTWVTVISSCSSLG---DPCLAESIVRKLDKVKFHS-------------- 108
M G+ PD +VTVI++ LG D L + D V ++
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 109 -NYFV---KTALLDMHAKCGNLKAAQEIFD-------------QLGVYRNSVSCNAMISA 151
YF K+++ + G++ +A I +LG+ N ++++S
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
Y++ + A +F + E++ V WN+MI GYA NGES ++LF +M S+ D+ T
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG-YNIDDFT 430
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
S+ S C L +G SI+ + ++ ++ N+L+ MY++CG++E+A IF+ M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK 331
RD V++NT+I + E L +M GI D L AC+H L +G++
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 332 VF-ESIKV---PDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
V S+K D+ + +IDM + G +++A K+ S+P
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 212/457 (46%), Gaps = 91/457 (19%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N+ +++V+ Y+K ++ A F+ + E++ V WNAM+ GYA +G + + + LF DM
Sbjct: 361 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SSG D+ T+ +++S+C++ D + + K K N FV AL+DM+AKCG L+
Sbjct: 421 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 480
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP------------------ 169
A++IF+++ R++V+ N +I +Y + + S A DLF +M
Sbjct: 481 DARQIFERM-CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 170 ---------------------ERDTVSWNSMIAGYAQNGESLMAIKLF------------ 196
+RD + +S+I Y++ G A K+F
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 197 ------------------KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+EM+ T P E+T ++ AC SL+LG ++
Sbjct: 600 ALIAGYSQNNLEEAVVLFQEML-TRGVNPSEITFATIVEACHKPESLTLG-------TQF 651
Query: 239 QIKLSILGYN--------SLIFMYSRCGSMEEATLIFQEMAT-RDLVSYNTLISGLASHG 289
+++ G++ SL+ MY M EA +F E+++ + +V + ++SG + +G
Sbjct: 652 HGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 290 HGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI--KVPDVDHYA-- 345
E +K +M+ DG+ PD+ T++ +L CS L EG+ + I D+D
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 346 CMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNA 382
+IDM + G ++ + ++ M + + SL+N
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 189/398 (47%), Gaps = 50/398 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
+V YAK + A FD + E+ V +WN+MLS Y+ G + +R F + +
Sbjct: 99 NAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIF 157
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
P++ T+ V+S+C+ + I + K+ N + AL+DM+AKC + A+ +
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 133 FDQL----------------------------------GVYRNSVSCNAMISAYARLGDL 158
F+ + G + ++ +I+ Y RLG L
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKL 277
Query: 159 SFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA 218
AR LF +M D V+WN MI+G+ + G +AI+ F M ++ K T+ SV SA
Sbjct: 278 KDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSS-VKSTRSTLGSVLSA 336
Query: 219 CGHLGSLSLGIWAVSILNEYQIKL----SILGYNSLIFMYSRCGSMEEATLIFQEMATRD 274
G + +L LG+ +++ IKL +I +SL+ MYS+C ME A +F+ + ++
Sbjct: 337 IGIVANLDLGL----VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 275 LVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFE 334
V +N +I G A +G + ++L MK G D T+ +L+ C+ + LE G + F
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FH 451
Query: 335 SIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
SI + ++ ++DM + G LE+A ++ M
Sbjct: 452 SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 133/285 (46%), Gaps = 13/285 (4%)
Query: 136 LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKL 195
LG+ NA++ YA+ +S+A F+ + E+D +WNSM++ Y+ G+ ++
Sbjct: 89 LGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRS 147
Query: 196 FKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYS 255
F + N P++ T V S C ++ G + + ++ + +L+ MY+
Sbjct: 148 FVSLFE-NQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYA 206
Query: 256 RCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+C + +A +F+ + + V + L SG G E + + +M+++G PD + ++
Sbjct: 207 KCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT 266
Query: 316 ILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPH 372
++ G L++ + +F + PDV + MI G+ G A++ +M ++
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 373 AGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIY 417
GS+L+A I ++LG + A+ + L SNIY
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLG--------LASNIY 363
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 278 bits (712), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 247/431 (57%), Gaps = 9/431 (2%)
Query: 24 NLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVIS 83
N A F + +V+ +NAM+ Y+ G LE++ F+ M S G DE T+ ++
Sbjct: 51 NSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLK 110
Query: 84 SCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSV 143
SCSSL D + + +L + FH ++ +++++ G + AQ++FD++ RN V
Sbjct: 111 SCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMS-ERNVV 169
Query: 144 SCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTN 203
N MI + GD+ LF +M ER VSWNSMI+ ++ G A++LF EMI
Sbjct: 170 VWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQG 229
Query: 204 DSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI-KLSILGYNSLIFMYSRCGSMEE 262
PDE T+V+V LG L G W S + K I N+L+ Y + G +E
Sbjct: 230 -FDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEA 288
Query: 263 ATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG-IEPDRITYIGILTACS 321
AT IF++M R++VS+NTLISG A +G G I L M E+G + P+ T++G+L CS
Sbjct: 289 ATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCS 348
Query: 322 HAGLLEEGQKVF----ESIKV-PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIY 376
+ G +E G+++F E K+ +HY M+D++ R G++ EA K + +MP+ +A ++
Sbjct: 349 YTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMW 408
Query: 377 GSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQ 436
GSLL+A R H V+L E+AA +L +EP NS NYVLLSN+YA GRW++V VR +M+K
Sbjct: 409 GSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKN 468
Query: 437 GVKKITAWSWV 447
++K T S +
Sbjct: 469 RLRKSTGQSTI 479
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 146/308 (47%), Gaps = 41/308 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+RNVV W M+ G+ SG+++ F +M ERS+VSWN+M+S ++ G E + LF +
Sbjct: 165 ERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYF-VKTALLDMHAKCG 124
M+ G +PDE T VTV+ +SLG + I + ++ V AL+D + K G
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+L+AA IF ++ RN VS N +IS A G F DLF+ M E V+
Sbjct: 285 DLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVA--------- 334
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLS 243
P+E T + V + C + G + G ++ E ++++
Sbjct: 335 ----------------------PNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEAR 372
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKL--ISK 300
Y +++ + SR G + EA + M + + +L+S SHG +KL ++
Sbjct: 373 TEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGD----VKLAEVAA 428
Query: 301 MKEDGIEP 308
M+ IEP
Sbjct: 429 MELVKIEP 436
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 238/441 (53%), Gaps = 46/441 (10%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T +V YAK G + AR FD+MP RS VSW A+
Sbjct: 117 TGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTAL-------------------------- 150
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
IS G+ LA + ++ VK + + A++D K G++ +A+ +
Sbjct: 151 ---------ISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRL 198
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
FD++ ++ ++ MI Y + D+ AR LF+ MPER+ VSWN+MI GY QN +
Sbjct: 199 FDEM-THKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEG 257
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
I+LF+EM +T PD++T++SV A G+LSLG W + ++ + +++
Sbjct: 258 IRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILD 317
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKL-ISKMKEDGIEPDRI 311
MYS+CG +E+A IF EM + + S+N +I G A +G+ + L ++ M E+ +PD I
Sbjct: 318 MYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE--KPDEI 375
Query: 312 TYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
T + ++TAC+H GL+EEG+K F ++ ++HY CM+D+LGR G L+EA LI +M
Sbjct: 376 TMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVG 427
P EP+ I S L+A +K +E E K +EP N NYVLL N+YA RW + G
Sbjct: 436 PFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFG 495
Query: 428 NVRNIMRKQGVKKITAWSWVE 448
V+N+MRK KK S +E
Sbjct: 496 MVKNVMRKNQAKKEVGCSLIE 516
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 140/272 (51%), Gaps = 47/272 (17%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ V+TWTTM+ GY ++ AR FD MPER++VSWN M+ GY Q+ E +RLF +
Sbjct: 204 HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQE 263
Query: 66 MLSSGN-EPDETTWVTVISSCS-----SLGDPCLAESIVRKLD-KVKFHSNYFVKTALLD 118
M ++ + +PD+ T ++V+ + S SLG+ C +KLD KVK V TA+LD
Sbjct: 264 MQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVK------VCTAILD 317
Query: 119 MHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNS 178
M++KCG ++ A+ IFD++ + S NAMI YA G+ A DLF M
Sbjct: 318 MYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNARAALDLFVTM---------- 366
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
MI + KPDE+TM++V +AC H G + G ++ E
Sbjct: 367 MI-----------------------EEKPDEITMLAVITACNHGGLVEEGRKWFHVMREM 403
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
+ I Y ++ + R GS++EA + M
Sbjct: 404 GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNM 435
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 178/389 (45%), Gaps = 53/389 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER--SVVSWNAMLSGYAQSGAALETVRLF 63
+ NV +T + A + + AR FD+ P+R S +S N+M+ Y ++ ++ L+
Sbjct: 7 ETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLS-NSMIKAYLETRQYPDSFALY 65
Query: 64 NDMLS-SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
D+ + PD T+ T+ SCS L+ + + L + HS + DM+
Sbjct: 66 RDLRKETCFAPDNFTFTTLTKSCS------LSMCVYQGL---QLHSQIWRFGFCADMYVS 116
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
G ++ YA+ G + AR+ F++MP R VSW ++I+G
Sbjct: 117 TG-----------------------VVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISG 153
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
Y + GE +A KLF +M D M+ F G + S A + +E K
Sbjct: 154 YIRCGELDLASKLFDQMPHVKDVVIYN-AMMDGFVKSGDMTS------ARRLFDEMTHK- 205
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+++ + ++I Y ++ A +F M R+LVS+NT+I G + E I+L +M+
Sbjct: 206 TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 303 -EDGIEPDRITYIGILTACSHAGLLEEGQ--KVFESIKVPDVDHYAC--MIDMLGRVGKL 357
++PD +T + +L A S G L G+ F K D C ++DM + G++
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 358 EEAMKLIHSMPMEP----HAGIYGSLLNA 382
E+A ++ MP + +A I+G LN
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNG 354
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+ V T ++ Y+K G ++ A+ FD+MPE+ V SWNAM+ GYA +G A + LF M
Sbjct: 307 KKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTM 366
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
+ +PDE T + VI++C+ G + ++ ++ ++D+ + G+L
Sbjct: 367 MIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSL 425
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE 170
K A+++ + N + ++ +SA + D+ A + K E
Sbjct: 426 KEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVE 469
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 243/435 (55%), Gaps = 38/435 (8%)
Query: 25 LKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISS 84
+ + R F+ MP + VVS+N +++GYAQSG + +R+ +M ++ +PD T +V+
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 85 CSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVS 144
S D + I + + S+ ++ ++L+DM+AK ++ ++ +F +L
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL-------Y 304
Query: 145 CNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTND 204
C RD +SWNS++AGY QNG A++LF++M+ T
Sbjct: 305 C-------------------------RDGISWNSLVAGYVQNGRYNEALRLFRQMV-TAK 338
Query: 205 SKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEAT 264
KP + SV AC HL +L LG + +I ++L+ MYS+CG+++ A
Sbjct: 339 VKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAAR 398
Query: 265 LIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAG 324
IF M D VS+ +I G A HGHG E + L +MK G++P+++ ++ +LTACSH G
Sbjct: 399 KIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVG 458
Query: 325 LLEEGQKVFESI-KV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSL 379
L++E F S+ KV +++HYA + D+LGR GKLEEA I M +EP ++ +L
Sbjct: 459 LVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTL 518
Query: 380 LNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVK 439
L++ +HK +EL E A K+FTV+ N YVL+ N+YA GRWKE+ +R MRK+G++
Sbjct: 519 LSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
Query: 440 KITAWSWVEHPSHVH 454
K A SW+E + H
Sbjct: 579 KKPACSWIEMKNKTH 593
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 167/345 (48%), Gaps = 11/345 (3%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F + V++W +++ + + + F +M +SG PD + +V+ SC+ + D
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKC---GNLKAAQEIFDQLGVYRNSVSCNAM 148
ES+ + ++ + + AL++M+AK G+ + +FD++ R S S +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMP-QRTSNSGDED 180
Query: 149 ISAYARLGDLSF--ARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSK 206
+ A + R +F MP +D VS+N++IAGYAQ+G A+++ +EM T D K
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM-GTTDLK 239
Query: 207 PDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLI 266
PD T+ SV + G + I + +SL+ MY++ +E++ +
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 267 FQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLL 326
F + RD +S+N+L++G +G E ++L +M ++P + + ++ AC+H L
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 327 EEGQK----VFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
G++ V ++ + ++DM + G ++ A K+ M
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/440 (35%), Positives = 243/440 (55%), Gaps = 42/440 (9%)
Query: 23 GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVI 82
G++ AR FD+M + + WN + GY ++ E++ L+ M G PDE T+ V+
Sbjct: 57 GDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVV 116
Query: 83 SSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNS 142
+ S LGD F + + ++ C + A +
Sbjct: 117 KAISQLGD---------------FSCGFALHAHVVKYGFGCLGIVATE------------ 149
Query: 143 VSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIST 202
++ Y + G+LS A LF M +D V+WN+ +A Q G S +A++ F +M +
Sbjct: 150 -----LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA- 203
Query: 203 NDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEE 262
+ + D T+VS+ SACG LGSL +G + +I +I+ N+ + M+ +CG+ E
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 263 ATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSH 322
A ++F+EM R++VS++T+I G A +G E + L + M+ +G+ P+ +T++G+L+ACSH
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 323 AGLLEEGQKVFESIKV--------PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAG 374
AGL+ EG++ F S+ V P +HYACM+D+LGR G LEEA + I MP+EP G
Sbjct: 324 AGLVNEGKRYF-SLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTG 382
Query: 375 IYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMR 434
I+G+LL A +H+ + LG+ A L P S +VLLSNIYA AG+W V VR+ MR
Sbjct: 383 IWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMR 442
Query: 435 KQGVKKITAWSWVEHPSHVH 454
K G KK+ A+S VE +H
Sbjct: 443 KLGTKKVAAYSSVEFEGKIH 462
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 129/283 (45%), Gaps = 37/283 (13%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
+ T +V Y K G L +A F+ M + +V+WNA L+ Q+G + + FN M +
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 70 GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
+ D T V+++S+C LG + E I + K + N V+ A LDMH KCGN +AA
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
+ +F+++ RN VS + MI Y A NG+S
Sbjct: 265 RVLFEEMK-QRNVVSWSTMIVGY-------------------------------AMNGDS 292
Query: 190 LMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL---NEYQIKLSILG 246
A+ LF M +P+ +T + V SAC H G ++ G S++ N+ ++
Sbjct: 293 REALTLFTTM-QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEH 351
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASH 288
Y ++ + R G +EEA ++M D + L+ A H
Sbjct: 352 YACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 116/254 (45%), Gaps = 11/254 (4%)
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
+K LK I + G + ++ +GD+ +AR +F++M + WN++
Sbjct: 22 SKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLF 81
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
GY +N ++ L+K+M +PDE T V A LG S G + + +Y
Sbjct: 82 KGYVRNQLPFESLLLYKKMRDLG-VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGF 140
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
+ L+ MY + G + A +F+ M +DLV++N ++ G+ ++ +K
Sbjct: 141 GCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNK 200
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMI-------DMLGR 353
M D ++ D T + +L+AC G LE G+++++ + ++D C I DM +
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEID---CNIIVENARLDMHLK 257
Query: 354 VGKLEEAMKLIHSM 367
G E A L M
Sbjct: 258 CGNTEAARVLFEEM 271
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 37/218 (16%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N++ + + K GN + AR+ F++M +R+VVSW+ M+ GYA +G + E + LF M
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ G P+ T++ V+S+CS G V YF L + + NL+
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAG-------------LVNEGKRYFS----LMVQSNDKNLE 346
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP-ERDTVSWNSMIAGYAQN 186
+E + +C M+ R G L A + KMP E DT W +++ A +
Sbjct: 347 PRKEHY----------AC--MVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Query: 187 GESLMAIKLFKEMISTNDSKPD----ELTMVSVFSACG 220
+ ++ K+ ++ T PD + + ++++A G
Sbjct: 395 RDMILGQKVADVLVET---APDIGSYHVLLSNIYAAAG 429
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/464 (34%), Positives = 249/464 (53%), Gaps = 38/464 (8%)
Query: 22 SGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE-PDETTWVT 80
S L AR PE +N ++ GY++S +V +F +M+ G PD ++
Sbjct: 52 SDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAF 111
Query: 81 VISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG--- 137
VI + + + + K S+ FV T L+ M+ CG ++ A+++FD++
Sbjct: 112 VIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPN 171
Query: 138 ---------------------------VYRNSVSCNAMISAYARLGDLSFARDLFNKMPE 170
+ RN S N M++ Y + G+L A+ +F++MP
Sbjct: 172 LVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPH 231
Query: 171 RDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
RD VSW++MI G A NG + F+E+ S P+E+++ V SAC GS G
Sbjct: 232 RDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMS-PNEVSLTGVLSACSQSGSFEFGKI 290
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHG 289
+ + + N+LI MYSRCG++ A L+F+ M R +VS+ ++I+GLA HG
Sbjct: 291 LHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHG 350
Query: 290 HGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHY 344
G E ++L ++M G+ PD I++I +L ACSHAGL+EEG+ F +K P+++HY
Sbjct: 351 QGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHY 410
Query: 345 ACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEP 404
CM+D+ GR GKL++A I MP+ P A ++ +LL A H +EL E +L ++P
Sbjct: 411 GCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDP 470
Query: 405 HNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
+NS + VLLSN YA AG+WK+V ++R M Q +KK TAWS VE
Sbjct: 471 NNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVE 514
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 136/321 (42%), Gaps = 17/321 (5%)
Query: 117 LDMHAKCGNLKAAQEI---FDQLGVYRNSVSCNAMI--SAYARLGDLSFARDLFNKMPER 171
L + C NL+A +I F + GV +S +I A + L +AR L PE
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 172 DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA 231
D +N+++ GY+++ E ++ +F EM+ PD + V A + SL G
Sbjct: 69 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 128
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHG 291
++ ++ + +LI MY CG +E A +F EM +LV++N +I+
Sbjct: 129 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 188
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDML 351
++ KM + + ++ +L AG LE +++F + D ++ MI +
Sbjct: 189 AGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGI 244
Query: 352 GRVGKLEEA---MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSS 408
G E+ + + M P+ +L+A E G++ VE S
Sbjct: 245 AHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHG---FVEKAGYS 301
Query: 409 NYVLLSNIYALAGRWKEVGNV 429
V ++N AL + GNV
Sbjct: 302 WIVSVNN--ALIDMYSRCGNV 320
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 266/524 (50%), Gaps = 82/524 (15%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P R+ +W TM++GYAK+ + A + F+KMPER+ VSW+AM++G+ Q+G V LF
Sbjct: 132 PSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFR 191
Query: 65 DMLSSGNEP--------------DETTWV-------------------TVISSCSSLGDP 91
M + P E WV T+I G
Sbjct: 192 KMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQV 251
Query: 92 CLAESIVRKLDKV-----------KFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG--- 137
A + ++ + +F N +++ + K G++ +A+ +FDQ+
Sbjct: 252 EAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRD 311
Query: 138 ---------------------------VYRNSVSCNAMISAYARLGDLSFARDLFNKMPE 170
R++ S N M+S YA +G++ AR F K PE
Sbjct: 312 TISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPE 371
Query: 171 RDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
+ TVSWNS+IA Y +N + A+ LF M + KPD T+ S+ SA L +L LG+
Sbjct: 372 KHTVSWNSIIAAYEKNKDYKEAVDLFIRM-NIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHG 289
I+ + I + +N+LI MYSRCG + E+ IF EM R+++++N +I G A HG
Sbjct: 431 MHQIVVKTVIP-DVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 290 HGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI----KV-PDVDHY 344
+ E + L MK +GI P IT++ +L AC+HAGL++E + F S+ K+ P ++HY
Sbjct: 490 NASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHY 549
Query: 345 ACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEP 404
+ ++++ G+ EEAM +I SMP EP ++G+LL+A RI+ V L +AA + +EP
Sbjct: 550 SSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEP 609
Query: 405 HNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
+S+ YVLL N+YA G W E VR M + +KK SWV+
Sbjct: 610 ESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 173/387 (44%), Gaps = 70/387 (18%)
Query: 21 KSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVT 80
+SG + AR F+K+ R+ V+WN M+SGY + + +LF+ M + D TW T
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDVVTWNT 107
Query: 81 VISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYR 140
+IS S G ++F L+ A+++FD++ R
Sbjct: 108 MISGYVSCGG-------------IRF-------------------LEEARKLFDEMPS-R 134
Query: 141 NSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMI 200
+S S N MIS YA+ + A LF KMPER+ VSW++MI G+ QNGE A+ LF++M
Sbjct: 135 DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM- 193
Query: 201 STNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS-----ILGYNSLIFMYS 255
DS P + ++ + LS W +L +Y +S + YN+LI Y
Sbjct: 194 PVKDSSP----LCALVAGLIKNERLSEAAW---VLGQYGSLVSGREDLVYAYNTLIVGYG 246
Query: 256 RCGSMEEATLI---------------FQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
+ G +E A + F+E +++VS+N++I G + L +
Sbjct: 247 QRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQ 306
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEA 360
MK+ D I++ ++ H +E+ +F + D + M+ VG +E A
Sbjct: 307 MKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELA 362
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHK 387
P E H + S++ A +K
Sbjct: 363 RHYFEKTP-EKHTVSWNSIIAAYEKNK 388
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 194/440 (44%), Gaps = 80/440 (18%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAA--LETVR-LF 63
RN VTW TM++GY K + AR FD MP+R VV+WN M+SGY G LE R LF
Sbjct: 69 RNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLF 128
Query: 64 NDMLSSGNEPDETTWVTVISSCSS---LGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
++M S D +W T+IS + +G+ L + + + V + +A++
Sbjct: 129 DEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW-------SAMITGF 177
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSC----------------------------------- 145
+ G + +A +F ++ V +S C
Sbjct: 178 CQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYA 237
Query: 146 -NAMISAYARLGDLSFARDLFNKMPE---------------RDTVSWNSMIAGYAQNGES 189
N +I Y + G + AR LF+++P+ ++ VSWNSMI Y + G+
Sbjct: 238 YNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDV 297
Query: 190 LMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS 249
+ A LF +M D ++ ++ H+ + A ++ +E + +N
Sbjct: 298 VSARLLFDQM-----KDRDTISWNTMIDGYVHVSRMED---AFALFSEMPNR-DAHSWNM 348
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
++ Y+ G++E A F++ + VS+N++I+ + E + L +M +G +PD
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 310 RITYIGILTACSHAGLLEEGQKVFESI---KVPDVDHYACMIDMLGRVGKLEEAMKLIHS 366
T +L+A + L G ++ + + +PDV + +I M R G++ E+ ++
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDE 468
Query: 367 MPMEPHAGIYGSLLNATRIH 386
M ++ + +++ H
Sbjct: 469 MKLKREVITWNAMIGGYAFH 488
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 108/250 (43%), Gaps = 60/250 (24%)
Query: 136 LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKL 195
LG + N MI R G ++ ARD+F K+ R+TV+WN+MI+GY + E A KL
Sbjct: 38 LGFRATNKELNQMI----RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKL 93
Query: 196 FKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYS 255
F D P K ++ +N++I Y
Sbjct: 94 F-------DVMP---------------------------------KRDVVTWNTMISGYV 113
Query: 256 RCGS---MEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
CG +EEA +F EM +RD S+NT+ISG A + E + L KM E + ++
Sbjct: 114 SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVS 169
Query: 313 YIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPH 372
+ ++T G ++ +F + V D ++ L + +L EA ++
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVL-------- 221
Query: 373 AGIYGSLLNA 382
G YGSL++
Sbjct: 222 -GQYGSLVSG 230
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 150/423 (35%), Positives = 246/423 (58%), Gaps = 40/423 (9%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSG-NEPDETTWVTVISSCSSLGDPCLAESI 97
+V WN ++ GYA+ G ++ L+ +M SG EPD T+ +I + +++ D L E+I
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 98 VRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGD 157
+ + F S +V+ +LL ++A C GD
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANC--------------------------------GD 171
Query: 158 LSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS 217
++ A +F+KMPE+D V+WNS+I G+A+NG+ A+ L+ EM ++ KPD T+VS+ S
Sbjct: 172 VASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLS 230
Query: 218 ACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS 277
AC +G+L+LG + + + ++ N L+ +Y+RCG +EEA +F EM ++ VS
Sbjct: 231 ACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS 290
Query: 278 YNTLISGLASHGHGIECIKLISKMKE-DGIEPDRITYIGILTACSHAGLLEEGQKVFESI 336
+ +LI GLA +G G E I+L M+ +G+ P IT++GIL ACSH G+++EG + F +
Sbjct: 291 WTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRM 350
Query: 337 KV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVEL 391
+ P ++H+ CM+D+L R G++++A + I SMPM+P+ I+ +LL A +H +L
Sbjct: 351 REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDL 410
Query: 392 GELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPS 451
E A ++ +EP++S +YVLLSN+YA RW +V +R M + GVKK+ S VE +
Sbjct: 411 AEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGN 470
Query: 452 HVH 454
VH
Sbjct: 471 RVH 473
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 34/273 (12%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
YA G++ +A FDKMPE+ +V+WN++++G+A++G E + L+ +M S G +PD T
Sbjct: 166 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
V+++S+C+ +G L + + + KV N LLD++A+CG ++ A+ +FD+
Sbjct: 226 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE--- 282
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
M ++++VSW S+I G A NG AI+LFK
Sbjct: 283 -----------------------------MVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 313
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEYQIKLSILGYNSLIFMYSRC 257
M ST P E+T V + AC H G + G + + EY+I+ I + ++ + +R
Sbjct: 314 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 258 GSMEEATLIFQEMATR-DLVSYNTLISGLASHG 289
G +++A + M + ++V + TL+ HG
Sbjct: 374 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 117/215 (54%), Gaps = 5/215 (2%)
Query: 158 LSFARDLFNKMPERDTVS-WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVF 216
+S+A +F+K+ + V WN++I GYA+ G S+ A L++EM + +PD T +
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 217 SACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV 276
A + + LG S++ I NSL+ +Y+ CG + A +F +M +DLV
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLV 188
Query: 277 SYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV-FES 335
++N++I+G A +G E + L ++M GI+PD T + +L+AC+ G L G++V
Sbjct: 189 AWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 336 IKV---PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
IKV ++ ++D+ R G++EEA L M
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM 283
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
RN+ + ++ YA+ G ++ A+ FD+M +++ VSW +++ G A +G E + LF M
Sbjct: 255 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 314
Query: 67 LSS-GNEPDETTWVTVISSCSSLGDPCLAESIVRKLD---KVKFHSNYFVKTALLDMHAK 122
S+ G P E T+V ++ +CS G R++ K++ +F ++D+ A+
Sbjct: 315 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF--GCMVDLLAR 372
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFA 161
G +K A E + + N V ++ A GD A
Sbjct: 373 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/445 (32%), Positives = 254/445 (57%), Gaps = 42/445 (9%)
Query: 34 KMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCL 93
+M E +V +NA+ G+ + ++ L+ ML P T+ +++ + S
Sbjct: 830 QMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASR--F 887
Query: 94 AESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL------------GVYR- 140
ES+ + K F + ++T L+D ++ G ++ A+++FD++ YR
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 141 -----------------NSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
N + N +I+ Y LG+L A LFN+MP +D +SW +MI GY
Sbjct: 948 VLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGY 1007
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIK 241
+QN AI +F +M+ PDE+TM +V SAC HLG L +G + ++ N + +
Sbjct: 1008 SQNKRYREAIAVFYKMMEEG-IIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLD 1066
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
+ I ++L+ MYS+CGS+E A L+F + ++L +N++I GLA+HG E +K+ +KM
Sbjct: 1067 VYI--GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKM 1124
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGK 356
+ + ++P+ +T++ + TAC+HAGL++EG++++ S+ V +V+HY M+ + + G
Sbjct: 1125 EMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGL 1184
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
+ EA++LI +M EP+A I+G+LL+ RIHK + + E+A KL +EP NS Y LL ++
Sbjct: 1185 IYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSM 1244
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKI 441
YA RW++V +R MR+ G++KI
Sbjct: 1245 YAEQNRWRDVAEIRGRMRELGIEKI 1269
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 146/286 (51%), Gaps = 37/286 (12%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
++N T ++ GY GNL+ A F++MP + ++SW M+ GY+Q+ E + +F
Sbjct: 963 EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M+ G PDE T TVIS+C+ LG + + + + F + ++ +AL+DM++KCG+
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGS 1082
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
L+ A +F FN +P+++ WNS+I G A
Sbjct: 1083 LERALLVF-------------------------------FN-LPKKNLFCWNSIIEGLAA 1110
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLS 243
+G + A+K+F +M KP+ +T VSVF+AC H G + G I+ S++++Y I +
Sbjct: 1111 HGFAQEALKMFAKM-EMESVKPNAVTFVSVFTACTHAGLVDEGRRIYR-SMIDDYSIVSN 1168
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASH 288
+ Y ++ ++S+ G + EA + M + V + L+ G H
Sbjct: 1169 VEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH 1214
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/440 (35%), Positives = 246/440 (55%), Gaps = 14/440 (3%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN-EPDETT 77
YA G ++ FD+MP+R VVSWN ++S Y +G + + +F M N + DE T
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 78 WVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG 137
V+ +S+CS+L + + E I R + +F + + AL+DM KCG L A+ +FD +
Sbjct: 151 IVSTLSACSALKNLEIGERIYRFV-VTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSM- 208
Query: 138 VYRNSVSC-NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
+V C +M+ Y G + AR LF + P +D V W +M+ GY Q A++LF
Sbjct: 209 -RDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELF 267
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSR 256
+ M T +PD +VS+ + C G+L G W +NE ++ + + +L+ MY++
Sbjct: 268 RCM-QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAK 326
Query: 257 CGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGI 316
CG +E A +F E+ RD S+ +LI GLA +G + L +M+ G+ D IT++ +
Sbjct: 327 CGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAV 386
Query: 317 LTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEP 371
LTAC+H G + EG+K+F S+ P +H +C+ID+L R G L+EA +LI M E
Sbjct: 387 LTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGES 446
Query: 372 H---AGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGN 428
+Y SLL+A R + V++ E A KL VE +SS + LL+++YA A RW++V N
Sbjct: 447 DETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTN 506
Query: 429 VRNIMRKQGVKKITAWSWVE 448
VR M+ G++K S +E
Sbjct: 507 VRRKMKDLGIRKFPGCSSIE 526
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 142/290 (48%), Gaps = 38/290 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+NV WT+MV GY +G + AR+ F++ P + VV W AM++GY Q E + LF
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRC 269
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M ++G PD V++++ C+ G + I +++ + + V TAL+DM+AKCG
Sbjct: 270 MQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGC 329
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
++ A E+F ++ ERDT SW S+I G A
Sbjct: 330 IETALEVFYEI--------------------------------KERDTASWTSLIYGLAM 357
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKLSI 244
NG S A+ L+ EM + + D +T V+V +AC H G ++ G S+ + ++
Sbjct: 358 NGMSGRALDLYYEMENVG-VRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKS 416
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEM---ATRDLVS-YNTLISGLASHGH 290
+ LI + R G ++EA + +M + LV Y +L+S ++G+
Sbjct: 417 EHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGN 466
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 168/385 (43%), Gaps = 76/385 (19%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIV 98
S++ +N ML A + + + LF ++ G PD T V+ S L
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRL---------- 59
Query: 99 RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDL 158
RK+ + + Y VK G+ +S N+++ YA LG +
Sbjct: 60 RKVIEGEKVHGYAVKA----------------------GLEFDSYVSNSLMGMYASLGKI 97
Query: 159 SFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA 218
+F++MP+RD VSWN +I+ Y NG AI +FK M ++ K DE T+VS SA
Sbjct: 98 EITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSA 157
Query: 219 CGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYSRCGSM---------------- 260
C L +L +G I+ ++ E+++ + I N+L+ M+ +CG +
Sbjct: 158 CSALKNLEIGERIYRF-VVTEFEMSVRI--GNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 261 ---------------EEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
+EA ++F+ +D+V + +++G E ++L M+ G
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 306 IEPDRITYIGILTACSHAGLLEEGQ----KVFESIKVPDVDHYACMIDMLGRVGKLEEAM 361
I PD + +LT C+ G LE+G+ + E+ D ++DM + G +E A+
Sbjct: 275 IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETAL 334
Query: 362 KLIHSMPMEPHAG----IYGSLLNA 382
++ + + A IYG +N
Sbjct: 335 EVFYEIKERDTASWTSLIYGLAMNG 359
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 244/448 (54%), Gaps = 44/448 (9%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+VT Y+K +L A FD +R+ ++W+AM++GY+Q+G +LE V+LF+ M S+G +P
Sbjct: 262 LVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPS 321
Query: 75 ETTWVTVISSCSSLGDPCLAE---SIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
E T V V+++CS D C E + L K+ F + F TAL+DM
Sbjct: 322 EYTIVGVLNACS---DICYLEEGKQLHSFLLKLGFERHLFATTALVDM------------ 366
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
YA+ G L+ AR F+ + ERD W S+I+GY QN ++
Sbjct: 367 --------------------YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEE 406
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLI 251
A+ L++ M T P++ TM SV AC L +L LG ++ L + ++L
Sbjct: 407 ALILYRRM-KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALS 465
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
MYS+CGS+E+ L+F+ +D+VS+N +ISGL+ +G G E ++L +M +G+EPD +
Sbjct: 466 TMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDV 525
Query: 312 TYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHS 366
T++ I++ACSH G +E G F + P VDHYACM+D+L R G+L+EA + I S
Sbjct: 526 TFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIES 585
Query: 367 MPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEV 426
++ ++ LL+A + H + ELG A KL + SS YV LS IY GR ++V
Sbjct: 586 ANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDV 645
Query: 427 GNVRNIMRKQGVKKITAWSWVEHPSHVH 454
V MR GV K SW+E + H
Sbjct: 646 ERVWKHMRANGVSKEVGCSWIELKNQYH 673
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 195/456 (42%), Gaps = 77/456 (16%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T++V Y K+G ++ F MPER+ +W+ M+SGYA G E +++FN L E
Sbjct: 157 TSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Query: 73 PDETTWV--TVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
++ +V V+SS ++ L I K + AL+ M++KC +L A
Sbjct: 217 GSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEAC 276
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
++FD G RNS++ +AM++ Y +QNGESL
Sbjct: 277 KMFDSSG-DRNSITWSAMVTGY-------------------------------SQNGESL 304
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSL 250
A+KLF M S KP E T+V V +AC + L G S L + + + +L
Sbjct: 305 EAVKLFSRMFSAG-IKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
+ MY++ G + +A F + RD+ + +LISG + E + L +MK GI P+
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 311 ITYIGILTAC-----------------------------------SHAGLLEEGQKVFES 335
T +L AC S G LE+G VF
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR 483
Query: 336 IKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPHAGIYGSLLNATRIHKQVELG 392
DV + MI L G+ +EA++L M MEP + ++++A VE G
Sbjct: 484 TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Query: 393 EL---AAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
+ ++P +Y + ++ + AG+ KE
Sbjct: 544 WFYFNMMSDQIGLDP-KVDHYACMVDLLSRAGQLKE 578
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 39/288 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+R++ T +V YAK+G L AR FD + ER V W +++SGY Q+ E + L+
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRR 413
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M ++G P++ T +V+ +CSSL L + + K F + +AL M++KCG+
Sbjct: 414 MKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGS 473
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
L+ G+L +F + P +D VSWN+MI+G +
Sbjct: 474 LED---------------------------GNL-----VFRRTPNKDVVSWNAMISGLSH 501
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS-- 243
NG+ A++LF+EM++ +PD++T V++ SAC H G + G + +++++ QI L
Sbjct: 502 NGQGDEALELFEEMLA-EGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSD-QIGLDPK 559
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRD--LVSYNTLISGLASHG 289
+ Y ++ + SR G ++EA F E A D L + L+S +HG
Sbjct: 560 VDHYACMVDLLSRAGQLKEAKE-FIESANIDHGLCLWRILLSACKNHG 606
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 172/359 (47%), Gaps = 46/359 (12%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSG---AALETVRLFNDMLSSGN 71
+V YAK G L A F+ + + VVSWN++++GY+Q+G ++ ++LF +M +
Sbjct: 55 LVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDI 114
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
P+ T + + SSL + + K+ + +V T+L+ M+ K G ++ +
Sbjct: 115 LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLK 174
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+F + RN+ + + M+S YA G + A +FN
Sbjct: 175 VFAYM-PERNTYTWSTMVSGYATRGRVEEAIKVFN------------------------- 208
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY---- 247
+E +DS ++S +A ++G L I ++I N +LG+
Sbjct: 209 --LFLREKEEGSDSDYVFTAVLSSLAATIYVG-LGRQIHCITIKN------GLLGFVALS 259
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N+L+ MYS+C S+ EA +F R+ ++++ +++G + +G +E +KL S+M GI+
Sbjct: 260 NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIK 319
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHY----ACMIDMLGRVGKLEEAMK 362
P T +G+L ACS LEEG+++ + + + ++DM + G L +A K
Sbjct: 320 PSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARK 378
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 118/219 (53%), Gaps = 22/219 (10%)
Query: 107 HSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSC----NAMISAYARLGDLSFAR 162
H++ +K L H++ NL A + + Q+ + + +C N +++ YA+ G L+ A
Sbjct: 13 HTSTLLKK--LTHHSQQRNLVAGRAVHGQI-IRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 163 DLFNKMPERDTVSWNSMIAGYAQNG---ESLMAIKLFKEMISTNDSKPDELTMVSVFSAC 219
+FN + +D VSWNS+I GY+QNG S ++LF+EM D P+ T+ +F A
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREM-RAQDILPNAYTLAGIFKAE 128
Query: 220 GHLGSLSLGIWAVSILNEYQIKLSILG----YNSLIFMYSRCGSMEEATLIFQEMATRDL 275
L S ++G A +++ +K+S G SL+ MY + G +E+ +F M R+
Sbjct: 129 SSLQSSTVGRQAHALV----VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNT 184
Query: 276 VSYNTLISGLASHGHGIECIK---LISKMKEDGIEPDRI 311
+++T++SG A+ G E IK L + KE+G + D +
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV 223
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 256/458 (55%), Gaps = 18/458 (3%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+RNVV+W TM+ GYA+SG + A FD+MPER++VSWN+M+ Q G E + LF
Sbjct: 136 PERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFE 195
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M D +W ++ + G A R+L N A++ +A+
Sbjct: 196 RMPRR----DVVSWTAMVDGLAKNGKVDEA----RRLFDCMPERNIISWNAMITGYAQNN 247
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ A ++F Q+ R+ S N MI+ + R +++ A LF++MPE++ +SW +MI GY
Sbjct: 248 RIDEADQLF-QVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYV 306
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
+N E+ A+ +F +M+ KP+ T VS+ SAC L L G ++++ + +
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNE 366
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQE--MATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+ ++L+ MYS+ G + A +F + RDL+S+N++I+ A HGHG E I++ ++M+
Sbjct: 367 IVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMR 426
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVF------ESIKVPDVDHYACMIDMLGRVGK 356
+ G +P +TY+ +L ACSHAGL+E+G + F ES+ + + +HY C++D+ GR G+
Sbjct: 427 KHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLRE-EHYTCLVDLCGRAGR 485
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
L++ I+ YG++L+A +H +V + + K+ ++ YVL+SNI
Sbjct: 486 LKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNI 545
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
YA G+ +E +R M+++G+KK SWV+ H
Sbjct: 546 YAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNH 583
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 205/459 (44%), Gaps = 70/459 (15%)
Query: 21 KSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVT 80
K G + AR FD +PER VV+W +++GY + G E LF+ + S N TW
Sbjct: 58 KVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKN---VVTWTA 114
Query: 81 VISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYR 140
++S +AE + +++ + N ++D +A+ G + A E+FD++ R
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPE----RNVVSWNTMIDGYAQSGRIDKALELFDEMP-ER 169
Query: 141 NSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF---- 196
N VS N+M+ A + G + A +LF +MP RD VSW +M+ G A+NG+ A +LF
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMP 229
Query: 197 -KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYS 255
+ +IS N M++ ++ + L + + +N++I +
Sbjct: 230 ERNIISWN-------AMITGYAQNNRIDE-------ADQLFQVMPERDFASWNTMITGFI 275
Query: 256 RCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG-IEPDRITYI 314
R M +A +F M ++++S+ T+I+G + E + + SKM DG ++P+ TY+
Sbjct: 276 RNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYV 335
Query: 315 GILTACSHAGLLEEGQKVFESIKVP----------------------------------- 339
IL+ACS L EGQ++ + I
Sbjct: 336 SILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVC 395
Query: 340 --DVDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNATRIHKQVELGEL 394
D+ + MI + G +EA+++ + M +P A Y +LL A VE G
Sbjct: 396 QRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGME 455
Query: 395 AAAKLFTVE--PHNSSNYVLLSNIYALAGRWKEVGNVRN 431
L E P +Y L ++ AGR K+V N N
Sbjct: 456 FFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFIN 494
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 170/373 (45%), Gaps = 63/373 (16%)
Query: 59 TVRLFN---DMLSSGNEP--DETTWVTVISSCSSLGDPCLAESIV--RKLDKVKFHSNYF 111
+V+LFN + SS + P + W+ +G+ C I RKL +
Sbjct: 27 SVQLFNLVRSIYSSSSRPRVPQPEWL--------IGELCKVGKIAEARKLFDGLPERDVV 78
Query: 112 VKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER 171
T ++ + K G+++ A+E+FD++ +N V+ AM+S Y R LS A LF +MPER
Sbjct: 79 TWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER 138
Query: 172 DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA 231
+ VSWN+MI GYAQ+G A++LF EM N
Sbjct: 139 NVVSWNTMIDGYAQSGRIDKALELFDEMPERN---------------------------- 170
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHG 291
I+ +NS++ + G ++EA +F+ M RD+VS+ ++ GLA +G
Sbjct: 171 ------------IVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKV 218
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDML 351
E +L M E I I++ ++T + ++E ++F+ + D + MI
Sbjct: 219 DEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGF 274
Query: 352 GRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLF---TVEPHNSS 408
R ++ +A L MP E + + +++ +K+ E +K+ +V+P+ +
Sbjct: 275 IRNREMNKACGLFDRMP-EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGT 333
Query: 409 NYVLLSNIYALAG 421
+LS LAG
Sbjct: 334 YVSILSACSDLAG 346
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 158/449 (35%), Positives = 252/449 (56%), Gaps = 25/449 (5%)
Query: 24 NLKTARIYFDKMPERSVVSWNAMLSGYAQS-----GAALETVRLFNDMLSSGNEPDETTW 78
NL AR FD+ + + A+L+ Y+ S +A RL + S P+ +
Sbjct: 72 NLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVN--RSVPRPNHFIY 129
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK-CGNLKAAQEIFDQLG 137
V+ S L + L K FH V+TALL +A ++ A+++FD++
Sbjct: 130 PLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMS 189
Query: 138 VYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFK 197
RN VS AM+S YAR GD+S A LF MPERD SWN+++A QNG L A+ LF+
Sbjct: 190 -ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSL--GIWAVSILNEYQIKLS--ILGYNSLIFM 253
MI+ +P+E+T+V V SAC G+L L GI A + Y+ LS + NSL+ +
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA----YRRDLSSDVFVSNSLVDL 304
Query: 254 YSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE---DGIEPDR 310
Y +CG++EEA+ +F+ + + L ++N++I+ A HG E I + +M + + I+PD
Sbjct: 305 YGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDH 364
Query: 311 ITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIH 365
IT+IG+L AC+H GL+ +G+ F+ + P ++HY C+ID+LGR G+ +EA++++
Sbjct: 365 ITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMS 424
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
+M M+ I+GSLLNA +IH ++L E+A L + P+N +++N+Y G W+E
Sbjct: 425 TMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEE 484
Query: 426 VGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
R +++ Q K WS +E + VH
Sbjct: 485 ARRARKMIKHQNAYKPPGWSRIEIDNEVH 513
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 152/291 (52%), Gaps = 39/291 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+RNVV+WT M++GYA+SG++ A F+ MPER V SWNA+L+ Q+G LE V LF
Sbjct: 190 ERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRR 249
Query: 66 MLSSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M++ + P+E T V V+S+C+ G LA+ I + S+ FV +L+D++ KCG
Sbjct: 250 MINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCG 309
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVS-WNSMIAGY 183
NL+ A +F KM + +++ WNSMI +
Sbjct: 310 NLEEASSVF---------------------------------KMASKKSLTAWNSMINCF 336
Query: 184 AQNGESLMAIKLFKEM--ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQI 240
A +G S AI +F+EM ++ ND KPD +T + + +AC H G +S G ++ N + I
Sbjct: 337 ALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGI 396
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGH 290
+ I Y LI + R G +EA + M + D + +L++ HGH
Sbjct: 397 EPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGH 447
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/454 (33%), Positives = 255/454 (56%), Gaps = 12/454 (2%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G +V M+T Y K N+++AR FD+M ER VVSWN+M+SGY+QSG+ + ++
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 63 FNDMLSSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
+ ML+ + +P+ T ++V +C D + +K+ + + + A++ +A
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYA 280
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
KCG+L A+ +FD++ ++SV+ A+IS Y G + A LF++M +WN+MI+
Sbjct: 281 KCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMIS 339
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQ 239
G QN I F+EMI S+P+ +T+ S+ + + +L G I A +I N
Sbjct: 340 GLMQNNHHEEVINSFREMIRCG-SRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGAD 398
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLIS 299
+ + S+I Y++ G + A +F R L+++ +I+ A HG L
Sbjct: 399 NNIYVT--TSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFD 456
Query: 300 KMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRV 354
+M+ G +PD +T +L+A +H+G + Q +F+S+ P V+HYACM+ +L R
Sbjct: 457 QMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRA 516
Query: 355 GKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLS 414
GKL +AM+ I MP++P A ++G+LLN + +E+ A +LF +EP N+ NY +++
Sbjct: 517 GKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMA 576
Query: 415 NIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
N+Y AGRW+E VRN M++ G+KKI SW+E
Sbjct: 577 NLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIE 610
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 148/304 (48%), Gaps = 43/304 (14%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML----- 67
+ +++ Y + + A FD++ R+ S+NA+L Y + LF +
Sbjct: 61 SKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCY 120
Query: 68 -SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLD----KVKFHSNYFVKTALLDMHAK 122
S PD + V+ + S D L S+ R++ + F S+ FV ++ + K
Sbjct: 121 SSDAARPDSISISCVLKALSGCDDFWLG-SLARQVHGFVIRGGFDSDVFVGNGMITYYTK 179
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
C N+++A+++FD++ R+ VS N+MIS G
Sbjct: 180 CDNIESARKVFDEMS-ERDVVSWNSMIS-------------------------------G 207
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
Y+Q+G K++K M++ +D KP+ +T++SVF ACG L G+ + E I++
Sbjct: 208 YSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQM 267
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+ N++I Y++CGS++ A +F EM+ +D V+Y +ISG +HG E + L S+M+
Sbjct: 268 DLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEME 327
Query: 303 EDGI 306
G+
Sbjct: 328 SIGL 331
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 271 bits (692), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 248/455 (54%), Gaps = 41/455 (9%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R+ ++ Y+K + R+ FD+MPE VS+N ++S Y+Q+ ++ F +M
Sbjct: 283 RDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
G + + T++S ++L + + + S V +L+DM+AKC
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC--- 399
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
E+F++ A +F +P+R TVSW ++I+GY Q
Sbjct: 400 ----EMFEE-------------------------AELIFKSLPQRTTVSWTALISGYVQK 430
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G +KLF +M +N + D+ T +V A SL LG + + ++
Sbjct: 431 GLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
+ L+ MY++CGS+++A +F+EM R+ VS+N LIS A +G G I +KM E G+
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAM 361
+PD ++ +G+LTACSH G +E+G + F+++ P HYACM+D+LGR G+ EA
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 609
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEP-HNSSNYVLLSNIYALA 420
KL+ MP EP ++ S+LNA RIHK L E AA KLF++E +++ YV +SNIYA A
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSWVE--HPSHV 453
G W++V +V+ MR++G+KK+ A+SWVE H HV
Sbjct: 670 GEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHV 704
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 170/372 (45%), Gaps = 41/372 (11%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P +N V+ TM++G+ K+G++ +AR FD MP+R+VV+W ++ YA++ E +LF
Sbjct: 75 PHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFR 134
Query: 65 DML--SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
M SS PD T+ T++ C+ + K+ F +N F+ +
Sbjct: 135 QMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS------- 187
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
N ++ +Y + L A LF ++PE+D+V++N++I G
Sbjct: 188 -----------------------NVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITG 224
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQI 240
Y ++G +I LF +M + +P + T V A L +LG + A+S+ +
Sbjct: 225 YEKDGLYTESIHLFLKMRQSG-HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
S+ N ++ YS+ + E ++F EM D VSYN +IS + + +
Sbjct: 284 DASV--GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVD---HYA-CMIDMLGRVGK 356
M+ G + + +L+ ++ L+ G+++ + D H ++DM +
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEM 401
Query: 357 LEEAMKLIHSMP 368
EEA + S+P
Sbjct: 402 FEEAELIFKSLP 413
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 126/233 (54%), Gaps = 17/233 (7%)
Query: 94 AESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYA 153
A I D SN+ V+ L + G + AA++++D++ ++N+VS N MIS +
Sbjct: 37 ARIIKTGFDTDTCRSNFIVEDLL-----RRGQVSAARKVYDEMP-HKNTVSTNTMISGHV 90
Query: 154 RLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMI-STNDSKPDELTM 212
+ GD+S ARDLF+ MP+R V+W ++ YA+N A KLF++M S++ + PD +T
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTF 150
Query: 213 VSVFSACGHLGSLSLGIWAVSILNEYQIKLS------ILGYNSLIFMYSRCGSMEEATLI 266
++ C ++ AV ++ + +KL + N L+ Y ++ A ++
Sbjct: 151 TTLLPGCND----AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 267 FQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTA 319
F+E+ +D V++NTLI+G G E I L KM++ G +P T+ G+L A
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 248/449 (55%), Gaps = 44/449 (9%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS--GNE 72
+V Y + G+ A FD+MPER +VSWN+++SGY+ G + + + M+ S G
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
P+E T++++IS+C G I +
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCI--------------------------------HGL 159
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
+ GV NA I+ Y + GDL+ + LF + ++ VSWN+MI + QNG +
Sbjct: 160 VMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKG 219
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSL--GIWAVSILNEYQIKLSILGYNSL 250
+ F M +PD+ T ++V +C +G + L GI + + + I +L
Sbjct: 220 LAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCIT--TAL 276
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
+ +YS+ G +E+++ +F E+ + D +++ +++ A+HG G + IK M GI PD
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDH 336
Query: 311 ITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIH 365
+T+ +L ACSH+GL+EEG+ FE++ P +DHY+CM+D+LGR G L++A LI
Sbjct: 337 VTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIK 396
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
MPMEP +G++G+LL A R++K +LG AA +LF +EP + NYV+LSNIY+ +G WK+
Sbjct: 397 EMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKD 456
Query: 426 VGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+RN+M+++G+ + + S++EH + +H
Sbjct: 457 ASRIRNLMKQKGLVRASGCSYIEHGNKIH 485
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 134/258 (51%), Gaps = 16/258 (6%)
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK-LFK 197
YR+ + ++ Y RLG A LF++MPERD VSWNS+I+GY+ G + L +
Sbjct: 63 YRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSR 122
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRC 257
MIS +P+E+T +S+ SAC + GS G ++ ++ + + N+ I Y +
Sbjct: 123 MMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKT 182
Query: 258 GSMEEATLIFQEMATRDLVSYNTLI-----SGLASHGHGIECIKLISKMKEDGIEPDRIT 312
G + + +F++++ ++LVS+NT+I +GLA G + + + G EPD+ T
Sbjct: 183 GDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKG-----LAYFNMSRRVGHEPDQAT 237
Query: 313 YIGILTACSHAGLLEEGQKVFESIKVPDVDHYAC----MIDMLGRVGKLEEAMKLIHSMP 368
++ +L +C G++ Q + I C ++D+ ++G+LE++ + H +
Sbjct: 238 FLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEIT 297
Query: 369 MEPHAGIYGSLLNATRIH 386
P + + ++L A H
Sbjct: 298 -SPDSMAWTAMLAAYATH 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%)
Query: 1 MMGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETV 60
M G N T ++ Y+K G L+ + F ++ ++W AML+ YA G + +
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 61 RLFNDMLSSGNEPDETTWVTVISSCSSLG 89
+ F M+ G PD T+ ++++CS G
Sbjct: 322 KHFELMVHYGISPDHVTFTHLLNACSHSG 350
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 242/449 (53%), Gaps = 42/449 (9%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+R+V +++ YAK G + AR FD++ ER VSWN+M+SGY+++G A + + LF
Sbjct: 164 ERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRK 223
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M G EPDE T V+++ +CS LGD + G
Sbjct: 224 MEEEGFEPDERTLVSMLGACSHLGD------------------------------LRTGR 253
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
L I ++G+ ++ + +IS Y + GDL AR +FN+M ++D V+W +MI Y+Q
Sbjct: 254 LLEEMAITKKIGL--STFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQ 311
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
NG+S A KLF EM T S PD T+ +V SACG +G+L LG + +E ++ +I
Sbjct: 312 NGKSSEAFKLFFEMEKTGVS-PDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIY 370
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
L+ MY +CG +EEA +F+ M ++ ++N +I+ A GH E + L +M
Sbjct: 371 VATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---S 427
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEA 360
+ P IT+IG+L+AC HAGL+ +G + F + VP ++HY +ID+L R G L+EA
Sbjct: 428 VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTV-EPHNSSNYVLLSNIYAL 419
+ + P +P + ++L A K V + E A L + E N+ NYV+ SN+ A
Sbjct: 488 WEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLAD 547
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
W E +R +MR +GV K SW+E
Sbjct: 548 MKMWDESAKMRALMRDRGVVKTPGCSWIE 576
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 178/356 (50%), Gaps = 38/356 (10%)
Query: 23 GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALET-VRLFNDMLSSGNEPDETTWVTV 81
G+ + F E + S+N M+ G + E + L+ M SG +PD+ T+ V
Sbjct: 79 GDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFV 138
Query: 82 ISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRN 141
+C+ L + + S+ L KV + + +L+ M+AKC
Sbjct: 139 FIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKC------------------ 180
Query: 142 SVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIS 201
G + +AR LF+++ ERDTVSWNSMI+GY++ G + A+ LF++M
Sbjct: 181 --------------GQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM-E 225
Query: 202 TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSME 261
+PDE T+VS+ AC HLG L G + +I LS + LI MY +CG ++
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLD 285
Query: 262 EATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS 321
A +F +M +D V++ +I+ + +G E KL +M++ G+ PD T +L+AC
Sbjct: 286 SARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACG 345
Query: 322 HAGLLEEGQKVFESIKVPDVDH--YAC--MIDMLGRVGKLEEAMKLIHSMPMEPHA 373
G LE G+++ + H Y ++DM G+ G++EEA+++ +MP++ A
Sbjct: 346 SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA 401
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 174/391 (44%), Gaps = 61/391 (15%)
Query: 93 LAESIVRKLDKVKFHSNYF-------VKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSC 145
LA SI R+ K F F ++ L + KC ++ ++I Q+ + +
Sbjct: 12 LAFSIYRQFPK--FKPRQFEEARRGDLERDFLFLLKKCISVNQLRQIQAQM-LLHSVEKP 68
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN-GESLMAIKLFKEMISTND 204
N +I LGD +++ LF+ E + S+N MI G + A+ L++ M +
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRM-KFSG 127
Query: 205 SKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEAT 264
KPD+ T VF AC L + +G S L + ++ + +SLI MY++CG + A
Sbjct: 128 LKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYAR 187
Query: 265 LIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAG 324
+F E+ RD VS+N++ISG + G+ + + L KM+E+G EPD T + +L ACSH G
Sbjct: 188 KLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLG 247
Query: 325 ------LLEE-----------------------------GQKVFESIKVPDVDHYACMID 349
LLEE ++VF + D + MI
Sbjct: 248 DLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMIT 307
Query: 350 MLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHN 406
+ + GK EA KL M + P AG ++L+A +ELG+ +E H
Sbjct: 308 VYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK-------QIETH- 359
Query: 407 SSNYVLLSNIYALAG---RWKEVGNVRNIMR 434
+S L NIY G + + G V +R
Sbjct: 360 ASELSLQHNIYVATGLVDMYGKCGRVEEALR 390
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 251/454 (55%), Gaps = 48/454 (10%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN- 71
++V Y+K G + A F ++ +RS++SWNAM++G+ +G + + F M+ N
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG-MMQEANI 204
Query: 72 --EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFH--SNYFVKTALLDMHAKCGNLK 127
PDE T +++ +CSS G + I L + FH S+ + +L+D++ KCG L
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+A R F+++ E+ +SW+S+I GYAQ G
Sbjct: 265 SA--------------------------------RKAFDQIKEKTMISWSSLILGYAQEG 292
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSIL 245
E + A+ LFK + N S+ D + S+ L G + A+++ ++ S+L
Sbjct: 293 EFVEAMGLFKRLQELN-SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL 351
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
NS++ MY +CG ++EA F EM +D++S+ +I+G HG G + +++ +M
Sbjct: 352 --NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN 409
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEA 360
IEPD + Y+ +L+ACSH+G+++EG+++F + P V+HYAC++D+LGR G+L+EA
Sbjct: 410 IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEA 469
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALA 420
LI +MP++P+ GI+ +LL+ R+H +ELG+ L ++ N +NYV++SN+Y A
Sbjct: 470 KHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQA 529
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
G W E GN R + +G+KK SWVE VH
Sbjct: 530 GYWNEQGNARELGNIKGLKKEAGMSWVEIEREVH 563
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 207/469 (44%), Gaps = 75/469 (15%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N++T ++ Y K A FD MPER+VVSW+A++SG+ +G ++ LF++M
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
G P+E T+ T + +C L I K+ F V +L+DM++KCG +
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A+++F ++ V R+ +S NAMI+ + G S A D F M E +
Sbjct: 160 EAEKVFRRI-VDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI-------------- 204
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSIL 245
+PDE T+ S+ AC G + G I + + + S
Sbjct: 205 ----------------KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
SL+ +Y +CG + A F ++ + ++S+++LI G A G +E + L +++E
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 306 IEPDRI---TYIGILTACS--------------------------------HAGLLEEGQ 330
+ D + IG+ + GL++E +
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 331 KVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPHAGIYGSLLNATRIHK 387
K F +++ DV + +I G+ G ++++++ + M +EP Y ++L+A
Sbjct: 369 KCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSG 428
Query: 388 QVELGELAAAKLFT---VEPHNSSNYVLLSNIYALAGRWKEVGNVRNIM 433
++ GE +KL ++P +Y + ++ AGR KE ++ + M
Sbjct: 429 MIKEGEELFSKLLETHGIKP-RVEHYACVVDLLGRAGRLKEAKHLIDTM 476
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 211 TMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
+VS+ C G G L + L+++ N LI MY +C A +F M
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 271 ATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQ 330
R++VS++ L+SG +G + L S+M GI P+ T+ L AC LE+G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 331 KV--------FESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++ FE + V+ ++DM + G++ EA K+ +
Sbjct: 128 QIHGFCLKIGFEMM----VEVGNSLVDMYSKCGRINEAEKVFRRI 168
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 249/447 (55%), Gaps = 38/447 (8%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
+++ YAKS K A F + E+ V+SW+ +++ Y Q+GAA E + +FNDM+ G EP
Sbjct: 203 SLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEP 262
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF 133
+ T + V+ +C++ D + + V TAL+DM+ KC + +
Sbjct: 263 NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPE------ 316
Query: 134 DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAI 193
AYA +F+++P +D VSW ++I+G+ NG + +I
Sbjct: 317 ----------------EAYA----------VFSRIPRKDVVSWVALISGFTLNGMAHRSI 350
Query: 194 KLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFM 253
+ F M+ N+++PD + MV V +C LG L S + +Y + SL+ +
Sbjct: 351 EEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVEL 410
Query: 254 YSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRIT 312
YSRCGS+ A+ +F +A +D V + +LI+G HG G + ++ + M K ++P+ +T
Sbjct: 411 YSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVT 470
Query: 313 YIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++ IL+ACSHAGL+ EG ++F+ + P+++HYA ++D+LGRVG L+ A+++ M
Sbjct: 471 FLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRM 530
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVG 427
P P I G+LL A RIH+ E+ E A KLF +E +++ Y+L+SN+Y + G W+ V
Sbjct: 531 PFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVE 590
Query: 428 NVRNIMRKQGVKKITAWSWVEHPSHVH 454
+RN ++++G+KK A S +E VH
Sbjct: 591 KLRNSVKQRGIKKGLAESLIEIRRKVH 617
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 206/459 (44%), Gaps = 76/459 (16%)
Query: 28 ARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSS 87
AR F +M +RS+ WN +L ++ E + F+ M +PD T + +C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 88 LGDPCLAESIVRKLDK-VKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCN 146
L + E I + K V S+ +V ++L+ M+ KCG
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGR--------------------- 111
Query: 147 AMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSK 206
MI A +F+++ + D V+W+SM++G+ +NG A++ F+ M+ +D
Sbjct: 112 -MIEALR----------MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVT 160
Query: 207 PDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEAT 264
PD +T++++ SAC L + LG + I + LS++ NSL+ Y++ + +EA
Sbjct: 161 PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLV--NSLLNCYAKSRAFKEAV 218
Query: 265 LIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAG 324
+F+ +A +D++S++T+I+ +G E + + + M +DG EP+ T + +L AC+ A
Sbjct: 219 NLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAH 278
Query: 325 LLEEGQKVFE-SIKV---PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEP----HAGIY 376
LE+G+K E +I+ +V ++DM + EEA + +P + A I
Sbjct: 279 DLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALIS 338
Query: 377 GSLLNATRIHKQV---------------------------ELGELAAAKLF---TVEPHN 406
G LN H+ + ELG L AK F ++
Sbjct: 339 GFTLNGM-AHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF 397
Query: 407 SSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWS 445
SN + +++ L R +GN + +K W+
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWT 436
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 188/385 (48%), Gaps = 50/385 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM-LSSGN 71
++++ Y K G + A FD++ + +V+W++M+SG+ ++G+ + V F M ++S
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
PD T +T++S+C+ L + L + + + F ++ + +LL+ +AK K A
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAV- 218
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+LF + E+D +SW+++IA Y QNG +
Sbjct: 219 -------------------------------NLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI----WAVSILNEYQIKLSILGY 247
A+ +F +M+ + ++P+ T++ V AC L G A+ E ++K+S
Sbjct: 248 ALLVFNDMMD-DGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS---- 302
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM-KEDGI 306
+L+ MY +C S EEA +F + +D+VS+ LISG +G I+ S M E+
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNT 362
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIKVP---DVDHY--ACMIDMLGRVGKLEEAM 361
PD I + +L +CS G LE+ K F S + D + + A ++++ R G L A
Sbjct: 363 RPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 421
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIH 386
K+ + + ++ ++ SL+ IH
Sbjct: 422 KVFNGIALKDTV-VWTSLITGYGIH 445
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 268 bits (686), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 250/455 (54%), Gaps = 24/455 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V + Y K L A FD+M R VSWNA+++ + Q+G ET+ LF ML
Sbjct: 416 DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML 475
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
S EPDE T+ +++ +C+ G I + K SN V +L+DM++KCG ++
Sbjct: 476 RSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIE 534
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A++I + R +VS G + + NK + VSWNS+I+GY
Sbjct: 535 EAEKIHSRF-FQRANVS-----------GTMEELEKMHNKRLQEMCVSWNSIISGYVMKE 582
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSIL 245
+S A LF M+ + PD+ T +V C +L S LG I A I E Q + I
Sbjct: 583 QSEDAQMLFTRMMEMGIT-PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
++L+ MYS+CG + ++ L+F++ RD V++N +I G A HG G E I+L +M +
Sbjct: 642 --STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILEN 699
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEA 360
I+P+ +T+I IL AC+H GL+++G + F +K P + HY+ M+D+LG+ GK++ A
Sbjct: 700 IKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRA 759
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHK-QVELGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
++LI MP E I+ +LL IH+ VE+ E A A L ++P +SS Y LLSN+YA
Sbjct: 760 LELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYAD 819
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
AG W++V ++R MR +KK SWVE +H
Sbjct: 820 AGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELH 854
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 180/371 (48%), Gaps = 45/371 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P R+VV+W M+ GY+KS ++ A +F+ MP R VVSWN+MLSGY Q+G +L+++ +F
Sbjct: 110 PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
DM G E D T+ ++ CS L D L I + +V ++ +ALLDM+AK
Sbjct: 170 DMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK-- 227
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ + L V F +PE+++VSW+++IAG
Sbjct: 228 ----GKRFVESLRV--------------------------FQGIPEKNSVSWSAIIAGCV 257
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
QN +A+K FKEM N + SV +C L L LG L+ + +K
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSI-YASVLRSCAALSELRLG----GQLHAHALKSDF 312
Query: 245 LG----YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
+ + MY++C +M++A ++F + SYN +I+G + HG + + L +
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVF----ESIKVPDVDHYACMIDMLGRVGK 356
+ G+ D I+ G+ AC+ L EG +++ +S DV IDM G+
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 357 LEEAMKLIHSM 367
L EA ++ M
Sbjct: 433 LAEAFRVFDEM 443
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 185/385 (48%), Gaps = 40/385 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+VV + ++ YAK + F +PE++ VSW+A+++G Q+ ++ F +M
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
++ + +V+ SC++L + L + K F ++ V+TA LDM+AKC N++
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQ 333
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
AQ +FD NS + N S+N+MI GY+Q
Sbjct: 334 DAQILFD------NSENLNRQ--------------------------SYNAMITGYSQEE 361
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
A+ LF ++S+ DE+++ VF AC + LS G+ + + + L +
Sbjct: 362 HGFKALLLFHRLMSSG-LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVA 420
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N+ I MY +C ++ EA +F EM RD VS+N +I+ +G G E + L M IE
Sbjct: 421 NAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 480
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESI---KVPDVDHYAC-MIDMLGRVGKLEEAMKL 363
PD T+ IL AC+ G L G ++ SI + C +IDM + G +EEA K
Sbjct: 481 PDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEK- 538
Query: 364 IHSMPMEPHAGIYGSLLNATRIHKQ 388
IHS + A + G++ ++H +
Sbjct: 539 IHSRFFQ-RANVSGTMEELEKMHNK 562
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 13/140 (9%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
E Q +V +T+V Y+K G+L +R+ F+K R V+WNAM+ GYA G E ++LF
Sbjct: 633 ELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLF 692
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLG--DPCLAESIVRKLD-----KVKFHSNYFVKTAL 116
M+ +P+ T+++++ +C+ +G D L + K D ++ +SN +
Sbjct: 693 ERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSN------M 746
Query: 117 LDMHAKCGNLKAAQEIFDQL 136
+D+ K G +K A E+ ++
Sbjct: 747 VDILGKSGKVKRALELIREM 766
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 124/326 (38%), Gaps = 65/326 (19%)
Query: 38 RSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESI 97
RSVVS+N L+ S + + F D L+ N T + V C+ G L +
Sbjct: 12 RSVVSFNRCLTEKI-SYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 98 VRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGD 157
+ F FV LL VY NS D
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQ-------------------VYTNS-------------RD 98
Query: 158 LSFARDLFNKMPERD-------------------------------TVSWNSMIAGYAQN 186
A +F+KMP RD VSWNSM++GY QN
Sbjct: 99 FVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQN 158
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
GESL +I++F +M + D T + C L SLG+ I+ ++
Sbjct: 159 GESLKSIEVFVDM-GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVA 217
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
++L+ MY++ E+ +FQ + ++ VS++ +I+G + +K +M++
Sbjct: 218 ASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
Query: 307 EPDRITYIGILTACSHAGLLEEGQKV 332
+ Y +L +C+ L G ++
Sbjct: 278 GVSQSIYASVLRSCAALSELRLGGQL 303
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 247/438 (56%), Gaps = 18/438 (4%)
Query: 25 LKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISS 84
++ A FD++PE V+S A++ + + +E + F +L G P+E T+ TVI S
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 85 CSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVS 144
++ D L + + K+ SN FV +A+L+ + K L A+ FD N VS
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR-DPNVVS 161
Query: 145 CNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTND 204
+IS Y + + A LF MPER V+WN++I G++Q G + A+ F +M+
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 205 SKPDELTMVSVFSACGHLGS----LSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSM 260
P+E T +A ++ S S+ A+ L + + ++ +NSLI YS+CG+M
Sbjct: 222 VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGK---RFNVFVWNSLISFYSKCGNM 278
Query: 261 EEATLIFQ--EMATRDLVSYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGIL 317
E++ L F E R++VS+N++I G A +G G E + + KM K+ + P+ +T +G+L
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 318 TACSHAGLLEEGQKVF-------ESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME 370
AC+HAGL++EG F + + +++HYACM+DML R G+ +EA +LI SMP++
Sbjct: 339 FACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 371 PHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVR 430
P G + +LL +IH L +LAA+K+ ++P + S+YV+LSN Y+ W+ V +R
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIR 458
Query: 431 NIMRKQGVKKITAWSWVE 448
M++ G+K+ T SW+E
Sbjct: 459 RKMKETGLKRFTGCSWIE 476
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 43/272 (15%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
NVV+ T +++GY K + A F MPERSVV+WNA++ G++Q+G E V F DML
Sbjct: 158 NVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 68 SSGNE-PDETTWVTVISSCSSLGDPCLAESI----VRKLDKVKFHSNYFVKTALLDMHAK 122
G P+E+T+ I++ S++ +SI ++ L K +F N FV +L+ ++K
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGK-RF--NVFVWNSLISFYSK 274
Query: 123 CGNLKAAQEIFDQL-GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
CGN++ + F++L RN VS N+MI W
Sbjct: 275 CGNMEDSLLAFNKLEEEQRNIVSWNSMI--------------------------W----- 303
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQI 240
GYA NG A+ +F++M+ + +P+ +T++ V AC H G + G ++ +N+Y
Sbjct: 304 GYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDD 363
Query: 241 K--LSILGYNSLIFMYSRCGSMEEATLIFQEM 270
L + Y ++ M SR G +EA + + M
Sbjct: 364 PNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 251/442 (56%), Gaps = 17/442 (3%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V+ +++++ Y K G + +AR FD+MPER+V +WNAM+ GY +G A+ LF ++
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS 139
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFH-SNYFVKTALLDMHAKCGNL 126
N TW+ +I G E +++ F N + +L ++ +
Sbjct: 140 VCRNT---VTWIEMIKG---YGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKM 193
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
+ A++ F+ + +N+ + M+S Y R+GD+ AR +F ++ RD V WN++IAGYAQN
Sbjct: 194 EDARKFFEDIP-EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQN 252
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G S AI F M +PD +T+ S+ SAC G L +G S++N I+L+
Sbjct: 253 GYSDDAIDAFFNM-QGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFV 311
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
N+LI MY++CG +E AT +F+ ++ R + N++IS LA HG G E +++ S M+ +
Sbjct: 312 SNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDL 371
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMK 362
+PD IT+I +LTAC H G L EG K+F +K P+V H+ C+I +LGR GKL+EA +
Sbjct: 372 KPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYR 431
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFT----VEPHNSSNYVLLSNIYA 418
L+ M ++P+ + G+LL A ++H E+ E + T ++ ++ +SN+YA
Sbjct: 432 LVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYA 491
Query: 419 LAGRWKEVGNVRNIMRKQGVKK 440
RW+ +R M K+G++K
Sbjct: 492 HTERWQTAEALRVEMEKRGLEK 513
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 137/269 (50%), Gaps = 33/269 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P++N W+ M++GY + G++ AR F ++ R +V WN +++GYAQ+G + + + F
Sbjct: 204 PEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFF 263
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+M G EPD T +++S+C+ G + + ++ N FV AL+DM+AKCG
Sbjct: 264 NMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCG 323
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+L+ A +F+ + V R+ CN+MIS A G A ++F+ M
Sbjct: 324 DLENATSVFESISV-RSVACCNSMISCLAIHGKGKEALEMFSTM---------------- 366
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
ESL D KPDE+T ++V +AC H G L G+ S + +K ++
Sbjct: 367 ---ESL-------------DLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNV 410
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATR 273
+ LI + R G ++EA + +EM +
Sbjct: 411 KHFGCLIHLLGRSGKLKEAYRLVKEMHVK 439
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 162/325 (49%), Gaps = 30/325 (9%)
Query: 78 WVTVISSCSSLGDPCLAESIVRKLDKVKFH--SNYFVKTALLDMHAKCGNLKAAQEIFDQ 135
WV +I + P + + + +KF S+ V ++L+ M+ KCG + +A+++FD+
Sbjct: 47 WVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDE 106
Query: 136 LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE-RDTVSWNSMIAGYAQNGESLMAIK 194
+ RN + NAMI Y GD A LF ++ R+TV+W MI GY + E A +
Sbjct: 107 MP-ERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARE 165
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL--SILGYNSLIF 252
LF+ M P EL V + S+ LG++ + E K I N+ ++
Sbjct: 166 LFERM-------PFELKNVKAW-------SVMLGVYVNNRKMEDARKFFEDIPEKNAFVW 211
Query: 253 M-----YSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
Y R G + EA IF + RDLV +NTLI+G A +G+ + I M+ +G E
Sbjct: 212 SLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYE 271
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESI--KVPDVDHYA--CMIDMLGRVGKLEEAMKL 363
PD +T IL+AC+ +G L+ G++V I + +++ + +IDM + G LE A +
Sbjct: 272 PDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSV 331
Query: 364 IHSMPMEPHAGIYGSLLNATRIHKQ 388
S+ + A S+++ IH +
Sbjct: 332 FESISVRSVA-CCNSMISCLAIHGK 355
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 253/444 (56%), Gaps = 46/444 (10%)
Query: 13 TTMVTGYAK-SGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN 71
T ++ Y+K + L R++ + +VVSW AM+SG+ Q+ E V LF++M G
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV 393
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVR-KLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
P+E T+ ++++ P ++ S V ++ K + + V TALLD
Sbjct: 394 RPNEFTYSVILTAL-----PVISPSEVHAQVVKTNYERSSTVGTALLD------------ 436
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
AY +LG + A +F+ + ++D V+W++M+AGYAQ GE+
Sbjct: 437 --------------------AYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHL-GSLSLGIWAVSILNEYQIKLSILGYNS 249
AIK+F E+ + KP+E T S+ + C S+ G + ++ S+ ++
Sbjct: 477 AAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSA 535
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
L+ MY++ G++E A +F+ +DLVS+N++ISG A HG ++ + + +MK+ ++ D
Sbjct: 536 LLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Query: 310 RITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLI 364
+T+IG+ AC+HAGL+EEG+K F+ + P +H +CM+D+ R G+LE+AMK+I
Sbjct: 596 GVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 365 HSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWK 424
+MP + I+ ++L A R+HK+ ELG LAA K+ ++P +S+ YVLLSN+YA +G W+
Sbjct: 656 ENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQ 715
Query: 425 EVGNVRNIMRKQGVKKITAWSWVE 448
E VR +M ++ VKK +SW+E
Sbjct: 716 ERAKVRKLMNERNVKKEPGYSWIE 739
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 205/482 (42%), Gaps = 87/482 (18%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V T++V Y K N K R FD+M ER+VV+W ++SGYA++ E + LF M
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ G +P+ T+ + + G + + K V +L++++ KCGN++
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 246
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A+ +FD+ V ++ V+ N+MIS GYA NG
Sbjct: 247 KARILFDKTEV-KSVVTWNSMIS-------------------------------GYAANG 274
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
L A+ +F M N + E + SV C +L L Q+ S++ Y
Sbjct: 275 LDLEALGMFYSM-RLNYVRLSESSFASVIKLCANLKELRF---------TEQLHCSVVKY 324
Query: 248 ---------NSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHGHGIECIKL 297
+L+ YS+C +M +A +F+E+ ++VS+ +ISG + E + L
Sbjct: 325 GFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 298 ISKMKEDGIEPDRITYIGILTACS-------HA------------------------GLL 326
S+MK G+ P+ TY ILTA HA G +
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKV 444
Query: 327 EEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNAT 383
EE KVF I D+ ++ M+ + G+ E A+K+ + ++P+ + S+LN
Sbjct: 445 EEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC 504
Query: 384 RIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITA 443
+G+ F ++ S+ + S + + + + + + ++Q K + +
Sbjct: 505 -AATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVS 563
Query: 444 WS 445
W+
Sbjct: 564 WN 565
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 135/272 (49%), Gaps = 45/272 (16%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+R+ T ++ Y K G ++ A F + ++ +V+W+AML+GYAQ+G +++F +
Sbjct: 425 ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGE 484
Query: 66 MLSSGNEPDETTWVTVISSCSSL------GDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
+ G +P+E T+ ++++ C++ G +I +LD S+ V +ALL M
Sbjct: 485 LTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD-----SSLCVSSALLTM 539
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
+AK GN+++A+E+F + ++ VS N+MIS YA+ G A D+F +M +R
Sbjct: 540 YAKKGNIESAEEVFKR-QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV------ 592
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEY 238
K D +T + VF+AC H G + G I+ +
Sbjct: 593 --------------------------KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
+I + + ++ +YSR G +E+A + + M
Sbjct: 627 KIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 144/305 (47%), Gaps = 38/305 (12%)
Query: 23 GNLKTARIY-----FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETT 77
G + ++R+Y FDK P R S+ ++L G+++ G E RLF ++ G E D +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 78 WVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG 137
+ +V+ ++L D + + K F + V T+L+D + K N K +++FD++
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 138 VYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFK 197
RN V+ +IS YAR NSM N E L LF
Sbjct: 156 -ERNVVTWTTLISGYAR----------------------NSM------NDEVLT---LFM 183
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRC 257
M ++P+ T + G G+ +++ + + +I NSLI +Y +C
Sbjct: 184 RM-QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 258 GSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGIL 317
G++ +A ++F + + +V++N++ISG A++G +E + + M+ + + ++ ++
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 318 TACSH 322
C++
Sbjct: 303 KLCAN 307
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 247/454 (54%), Gaps = 46/454 (10%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPE-RSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN 71
VT Y+K G L+ A F M E R VSWN+M+ Y Q + + L+ +M+ G
Sbjct: 177 NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGF 236
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
+ D T +V+++ +SL KL K FH N V + L+D ++KCG
Sbjct: 237 KIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGG------ 290
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE-SL 190
C+ M + +F ++ D V WN+MI+GY+ N E S
Sbjct: 291 -------------CDGMYDS----------EKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSL-----GIWAVSILNEYQIKLSIL 245
A+K F++M +PD+ + V V SAC +L S S G+ S + +I ++
Sbjct: 328 EAVKSFRQMQRIG-HRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN-- 384
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
N+LI +Y + G++++A +F M + VS+N +I G A HGHG E + L +M + G
Sbjct: 385 --NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEA 360
I P++IT++ +L+AC+H G ++EGQ+ F ++K P+ +HY+CMID+LGR GKLEEA
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALA 420
+ I +MP +P + + +LL A R HK + L E AA +L ++P ++ YV+L+N+YA A
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADA 562
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+W+E+ +VR MR + ++K SW+E H
Sbjct: 563 RKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKH 596
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 120/466 (25%), Positives = 208/466 (44%), Gaps = 68/466 (14%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
V Y+K G L AR F E +V S+N ++ YA+ +LF+++ +PD
Sbjct: 49 FVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEI----PQPD 104
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
++ T+IS + + A + +++ K+ F + F + L+ +L F
Sbjct: 105 TVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFS 164
Query: 135 QLGVYRNSVSC-NAMISAYARLGDLSFARDLFNKMPE-RDTVSWNSMIAGYAQNGESLMA 192
G + + S NA ++ Y++ G L A +F M E RD VSWNSMI Y Q+ E A
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKA 224
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS--- 249
+ L+KEMI K D T+ SV +A L L G ++ KL G++
Sbjct: 225 LALYKEMI-FKGFKIDMFTLASVLNALTSLDHLIGG-------RQFHGKLIKAGFHQNSH 276
Query: 250 ----LIFMYSRCG---SMEEATLIFQEMATRDLVSYNTLISGLASHGH-GIECIKLISKM 301
LI YS+CG M ++ +FQE+ + DLV +NT+ISG + + E +K +M
Sbjct: 277 VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQM 336
Query: 302 KEDGIEPDRITYIGILTACSH------------------------------------AGL 325
+ G PD +++ + +ACS+ +G
Sbjct: 337 QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGN 396
Query: 326 LEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPHAGIYGSLLNA 382
L++ + VF+ + + + CMI + G EA+ L M + P+ + ++L+A
Sbjct: 397 LQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSA 456
Query: 383 TRIHKQVELGEL---AAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
+V+ G+ + F +EP + +Y + ++ AG+ +E
Sbjct: 457 CAHCGKVDEGQEYFNTMKETFKIEP-EAEHYSCMIDLLGRAGKLEE 501
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 10/213 (4%)
Query: 108 SNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNK 167
SN+FV ++++KCG L A+ F N S N ++ AYA+ + AR LF++
Sbjct: 46 SNHFV-----NLYSKCGRLSYARAAFYSTEE-PNVFSYNVIVKAYAKDSKIHIARQLFDE 99
Query: 168 MPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSL 227
+P+ DTVS+N++I+GYA E+ A+ LFK M + D T+ + +AC L
Sbjct: 100 IPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLG-FEVDGFTLSGLIAACCDRVDLIK 158
Query: 228 GIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM-ATRDLVSYNTLISGLA 286
+ S+ + S+ N+ + YS+ G + EA +F M RD VS+N++I
Sbjct: 159 QLHCFSVSGGFDSYSSV--NNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYG 216
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTA 319
H G + + L +M G + D T +L A
Sbjct: 217 QHKEGAKALALYKEMIFKGFKIDMFTLASVLNA 249
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P + +++ Y KSGNL+ AR FD+MPE + VS+N M+ GYAQ G E + L+
Sbjct: 377 PSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQ 436
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAE---SIVRKLDKVKFHSNYFVKTALLDMHA 121
ML SG P++ T+V V+S+C+ G + + +++ K++ + ++ + ++D+
Sbjct: 437 RMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY--SCMIDLLG 494
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM 168
+ G L+ A+ D + SV+ A++ A + +++ A N++
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANEL 541
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/449 (32%), Positives = 239/449 (53%), Gaps = 14/449 (3%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
+V W ++ YAK G+L AR FD+MP R + SWN M++GYA+ G E +LF++M
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM-- 177
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKV-KFHSNYFVKTALLDMHAKCGNLK 127
E D +W +++ P A + + +V N F + + A ++
Sbjct: 178 --TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR 235
Query: 128 AAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+EI + G+ + V ++++ Y + G + AR++F+K+ E+D VSW SMI Y
Sbjct: 236 RGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
++ LF E++ + + +P+E T V +AC L + LG +
Sbjct: 296 KSSRWREGFSLFSELVGSCE-RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYS 354
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
+SL+ MY++CG++E A + DLVS+ +LI G A +G E +K + +
Sbjct: 355 FASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP-----DVDHYACMIDMLGRVGKLEE 359
G +PD +T++ +L+AC+HAGL+E+G + F SI DHY C++D+L R G+ E+
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQ 474
Query: 360 AMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
+I MPM+P ++ S+L + ++L E AA +LF +EP N YV ++NIYA
Sbjct: 475 LKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAA 534
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
AG+W+E G +R M++ GV K SW E
Sbjct: 535 AGKWEEEGKMRKRMQEIGVTKRPGSSWTE 563
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/441 (33%), Positives = 242/441 (54%), Gaps = 41/441 (9%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T ++ Y+K G +K F + + +V++NAM+ GY +G ++ LF +++ SG
Sbjct: 260 TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAR 319
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
+T V+++ G L +I Y +K+ L HA
Sbjct: 320 LRSSTLVSLVPVS---GHLMLIYAI----------HGYCLKSNFLS-HA----------- 354
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
SVS A+ + Y++L ++ AR LF++ PE+ SWN+MI+GY QNG + A
Sbjct: 355 ---------SVS-TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
I LF+EM ++ P+ +T+ + SAC LG+LSLG W ++ + SI +LI
Sbjct: 405 ISLFREM-QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MY++CGS+ EA +F M ++ V++NT+ISG HG G E + + +M GI P +T
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 313 YIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++ +L ACSHAGL++EG ++F S+ P V HYACM+D+LGR G L+ A++ I +M
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVG 427
+EP + ++ +LL A RIHK L + KLF ++P N +VLLSNI++ + +
Sbjct: 584 SIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAA 643
Query: 428 NVRNIMRKQGVKKITAWSWVE 448
VR +K+ + K ++ +E
Sbjct: 644 TVRQTAKKRKLAKAPGYTLIE 664
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 176/364 (48%), Gaps = 49/364 (13%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS-SGN 71
+ +V Y K ++ AR FD+MPE+ + WN M+SGY ++ +E++++F D+++ S
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
D TT + ++ + + L + L ++ HS
Sbjct: 218 RLDTTTLLDILPAVAELQELRLG---------MQIHS----------------------- 245
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+ + G Y + IS Y++ G + LF + + D V++N+MI GY NGE+ +
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS-- 249
++ LFKE++ + ++ T+VS+ GHL + I+A+ + Y +K + L + S
Sbjct: 306 SLSLFKELMLSG-ARLRSSTLVSLVPVSGHL----MLIYAI---HGYCLKSNFLSHASVS 357
Query: 250 --LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
L +YS+ +E A +F E + L S+N +ISG +G + I L +M++
Sbjct: 358 TALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFS 417
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH----YACMIDMLGRVGKLEEAMKL 363
P+ +T IL+AC+ G L G+ V + ++ D + +I M + G + EA +L
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 364 IHSM 367
M
Sbjct: 478 FDLM 481
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 83/168 (49%), Gaps = 1/168 (0%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ ++ T ++ YAK G++ AR FD M +++ V+WN M+SGY G E + +F +
Sbjct: 452 ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYE 511
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKL-DKVKFHSNYFVKTALLDMHAKCG 124
ML+SG P T++ V+ +CS G + I + + F + ++D+ + G
Sbjct: 512 MLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAG 571
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERD 172
+L+ A + + + + S ++ A D + AR + K+ E D
Sbjct: 572 HLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD 619
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 6/198 (3%)
Query: 139 YRNSVSC-NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFK 197
+RN +S + + LG + +ARD+F + D +N ++ G++ N ++ +F
Sbjct: 48 FRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFA 107
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYS 255
+ + D KP+ T SA G I ++++ +L +LG N ++ MY
Sbjct: 108 HLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSEL-LLGSN-IVKMYF 165
Query: 256 RCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYI 314
+ +E+A +F M +D + +NT+ISG + +E I++ + E D T +
Sbjct: 166 KFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLL 225
Query: 315 GILTACSHAGLLEEGQKV 332
IL A + L G ++
Sbjct: 226 DILPAVAELQELRLGMQI 243
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 246/451 (54%), Gaps = 44/451 (9%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVS--WNAMLSGYAQSGAALETVRLFNDMLSSG 70
T +++ Y K G + AR F++ P+ S +S +NA++SGY + + +F M +G
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 71 NEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC--GNLKA 128
D T + ++ C+ L S +H +C G L +
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRS----------------------LHGQCVKGGLDS 189
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
+ N+ I+ Y + G + R LF++MP + ++WN++I+GY+QNG
Sbjct: 190 EVAVL------------NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGL 237
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
+ ++L+++M S+ PD T+VSV S+C HLG+ +G ++ ++ N
Sbjct: 238 AYDVLELYEQMKSSGVC-PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSN 296
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEP 308
+ I MY+RCG++ +A +F M + LVS+ +I HG G + L M + GI P
Sbjct: 297 ASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRP 356
Query: 309 DRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKL 363
D ++ +L+ACSH+GL ++G ++F ++K P +HY+C++D+LGR G+L+EAM+
Sbjct: 357 DGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 416
Query: 364 IHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRW 423
I SMP+EP ++G+LL A +IHK V++ ELA AK+ EP+N YVL+SNIY+ +
Sbjct: 417 IESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQ 476
Query: 424 KEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+ + +R +MR++ +K +S+VEH VH
Sbjct: 477 EGIWRIRVMMRERAFRKKPGYSYVEHKGRVH 507
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 146/312 (46%), Gaps = 37/312 (11%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
V + +T Y K G+++ R FD+MP + +++WNA++SGY+Q+G A + + L+ M S
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
SG PD T V+V+SSC+ LG + + + ++ F N FV A + M+A+CGNL
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAK 310
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
A+ +FD MP + VSW +MI Y +G
Sbjct: 311 ARAVFD--------------------------------IMPVKSLVSWTAMIGCYGMHGM 338
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN-EYQIKLSILGY 247
+ + LF +MI +PD V V SAC H G G+ + EY+++ Y
Sbjct: 339 GEIGLMLFDDMIKRG-IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY 397
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
+ L+ + R G ++EA + M D + L+ H + +K+ E
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE--F 455
Query: 307 EPDRITYIGILT 318
EP+ I Y +++
Sbjct: 456 EPNNIGYYVLMS 467
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
NV ++ YA+ GNL AR FD MP +S+VSW AM+ Y G + LF+DM+
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDK-VKFHSNYFVKTALLDMHAKCGNL 126
G PD +V V+S+CS G + R + + K + L+D+ + G L
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE 170
A E + + V + A++ A ++ A F K+ E
Sbjct: 411 DEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 454
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 257/513 (50%), Gaps = 76/513 (14%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++T Y K G++K+AR+ FD+MP R ++SWNAM+SGY ++G E + LF M +PD
Sbjct: 237 LITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF- 133
T +VIS+C LGD L I + F + V +L M+ G+ + A+++F
Sbjct: 297 LMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFS 356
Query: 134 ---------------------------------DQLGVYRNSVSCNAMISAYARLGDLSF 160
DQ V + ++ A++SA A LGDL
Sbjct: 357 RMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDT 416
Query: 161 -----------------------------------ARDLFNKMPERDTVSWNSMIAGYAQ 185
A D+F+ +P ++ +SW S+IAG
Sbjct: 417 GVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRL 476
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
N A+ ++M T +P+ +T+ + +AC +G+L G + + + L
Sbjct: 477 NNRCFEALIFLRQMKMT--LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDF 534
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
N+L+ MY RCG M A F +D+ S+N L++G + G G ++L +M +
Sbjct: 535 LPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSR 593
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAM 361
+ PD IT+I +L CS + ++ +G F ++ P++ HYAC++D+LGR G+L+EA
Sbjct: 594 VRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAH 653
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAG 421
K I MP+ P ++G+LLNA RIH +++LGEL+A +F ++ + Y+LL N+YA G
Sbjct: 654 KFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCG 713
Query: 422 RWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+W+EV VR +M++ G+ SWVE VH
Sbjct: 714 KWREVAKVRRMMKENGLTVDAGCSWVEVKGKVH 746
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 178/357 (49%), Gaps = 42/357 (11%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML-SSGNEPDETT 77
+ + GNL A F KM ER++ SWN ++ GYA+ G E + L++ ML G +PD T
Sbjct: 139 FVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYT 198
Query: 78 WVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG 137
+ V+ +C + D + + + + + + V AL+ M+ KCG++K+A+ +FD++
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 138 VYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFK 197
R+ +S NAMIS GY +NG ++LF
Sbjct: 259 -RRDIISWNAMIS-------------------------------GYFENGMCHEGLELFF 286
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYS 255
M + PD +T+ SV SAC LG LG I A I + + +S+ NSL MY
Sbjct: 287 AMRGLS-VDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC--NSLTQMYL 343
Query: 256 RCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
GS EA +F M +D+VS+ T+ISG + + I M +D ++PD IT
Sbjct: 344 NAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAA 403
Query: 316 ILTACSHAGLLEEGQKVFE-SIKVPDVDHYAC---MIDMLGRVGKLEEAMKLIHSMP 368
+L+AC+ G L+ G ++ + +IK + + +I+M + +++A+ + H++P
Sbjct: 404 VLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 4/226 (1%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
NA ++ + R G+L A +F KM ER+ SWN ++ GYA+ G A+ L+ M+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
KPD T V CG + L+ G + Y +L I N+LI MY +CG ++ A L
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGL 325
+F M RD++S+N +ISG +G E ++L M+ ++PD +T +++AC G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 326 LEEGQKVFESIKVPD--VDHYAC--MIDMLGRVGKLEEAMKLIHSM 367
G+ + + VD C + M G EA KL M
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRM 358
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 122/286 (42%), Gaps = 37/286 (12%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
V+ ++ Y+K + A F +P ++V+SW ++++G + E + +F +
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMK 491
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
+P+ T +++C+ +G + I + + + F+ ALLDM+ +CG +
Sbjct: 492 MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
A F+ ++ S N +++ Y+ G S
Sbjct: 552 AWSQFNSQK--KDVTSWNILLTGYSERGQGS----------------------------- 580
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
M ++LF M+ + +PDE+T +S+ C + G+ S + +Y + ++ Y
Sbjct: 581 --MVVELFDRMVKSR-VRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYA 637
Query: 249 SLIFMYSRCGSMEEATLIFQEM-ATRDLVSYNTLISGLASHGHGIE 293
++ + R G ++EA Q+M T D + L++ H H I+
Sbjct: 638 CVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH-HKID 682
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 253/449 (56%), Gaps = 15/449 (3%)
Query: 19 YAKSGNLKTARIYFDKMP--ERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDET 76
YA SG + TA+ FD++P E+ V W +LS +++ G + +++LF +M E D+
Sbjct: 53 YASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDV 112
Query: 77 TWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL 136
+ V + C+ L D A+ K+ ++ V AL+DM+ KCG + + IF++L
Sbjct: 113 SVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEEL 172
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
++ VS ++ + L R++F++MPER+ V+W M+AGY G + ++L
Sbjct: 173 E-EKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELL 231
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA-VSILNEYQIKLSILGYN------S 249
EM+ + +T+ S+ SAC G+L +G W V L + + Y+ +
Sbjct: 232 AEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTA 291
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
L+ MY++CG+++ + +F+ M R++V++N L SGLA HG G I + +M + ++PD
Sbjct: 292 LVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPD 350
Query: 310 RITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIH 365
+T+ +L+ACSH+G+++EG + F S++ P VDHYACM+D+LGR G +EEA L+
Sbjct: 351 DLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMR 410
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
MP+ P+ + GSLL + +H +VE+ E +L + P N+ +L+SN+Y GR
Sbjct: 411 EMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDI 470
Query: 426 VGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+R +RK+G++KI S + VH
Sbjct: 471 ADGLRGSLRKRGIRKIPGLSSIYVNDSVH 499
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 150/311 (48%), Gaps = 47/311 (15%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+++VV+WT ++ K L+ R F +MPER+ V+W M++GY +G E + L +
Sbjct: 174 EKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAE 233
Query: 66 ML-SSGNEPDETTWVTVISSCSSLGDPCLAESI-VRKLDKVKF------HSNYFVKTALL 117
M+ G+ + T +++S+C+ G+ + + V L K + + V TAL+
Sbjct: 234 MVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALV 293
Query: 118 DMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWN 177
DM+AKCGN+ ++ +F +L RN V+ NA+ S
Sbjct: 294 DMYAKCGNIDSSMNVF-RLMRKRNVVTWNALFS--------------------------- 325
Query: 178 SMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE 237
G A +G+ M I +F +MI + KPD+LT +V SAC H G + G L
Sbjct: 326 ----GLAMHGKGRMVIDMFPQMI--REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF 379
Query: 238 YQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMAT-RDLVSYNTLISGLASHGHGIECIK 296
Y ++ + Y ++ + R G +EEA ++ +EM + V +L+ + HG ++
Sbjct: 380 YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGK----VE 435
Query: 297 LISKMKEDGIE 307
+ ++K + I+
Sbjct: 436 IAERIKRELIQ 446
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 118/267 (44%), Gaps = 46/267 (17%)
Query: 146 NAMISAYARLGDLSFARDLFNKMP--ERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTN 203
NA+ YA G++ A+ LF+++P E+D V W ++++ +++ G + ++KLF EM
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEM-RRK 105
Query: 204 DSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCG----- 258
+ D++++V +F C L L + + + S+ N+L+ MY +CG
Sbjct: 106 RVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEV 165
Query: 259 --------------------------SMEEATLIFQEMATRDLVSYNTLISGLASHGHGI 292
+E +F EM R+ V++ +++G G
Sbjct: 166 KRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTR 225
Query: 293 ECIKLISKMK-EDGIEPDRITYIGILTACSHAGLLEEGQKVF-----------ESIKVPD 340
E ++L+++M G + +T +L+AC+ +G L G+ V E D
Sbjct: 226 EVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDD 285
Query: 341 VDHYACMIDMLGRVGKLEEAMKLIHSM 367
V ++DM + G ++ +M + M
Sbjct: 286 VMVGTALVDMYAKCGNIDSSMNVFRLM 312
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/463 (32%), Positives = 263/463 (56%), Gaps = 23/463 (4%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETV 60
P RN ++W M+ G+++ + ++A F+ M V+W ++LS ++Q G + +
Sbjct: 220 PVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVL 279
Query: 61 RLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
+ F+ M SGN S C+ L +AE + + K F + AL+ ++
Sbjct: 280 KYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVY 339
Query: 121 AKCGNLKAAQEIFDQLGVYRNS--VSCNAMISAYARLGDLSFARDLFNKMPE-------- 170
K G +K A+ +F Q+ RN S N++I+++ G L A LF+++ E
Sbjct: 340 GKQGKVKDAEHLFRQI---RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVK 396
Query: 171 RDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
+ V+W S+I G G +++ F++M + + +T+ + S C L +L+LG
Sbjct: 397 ANVVTWTSVIKGCNVQGRGDDSLEYFRQM-QFSKVLANSVTICCILSICAELPALNLGRE 455
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGH 290
+ + +IL N+L+ MY++CG + E +L+F+ + +DL+S+N++I G HG
Sbjct: 456 IHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGF 515
Query: 291 GIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYA 345
+ + + +M G PD I + +L+ACSHAGL+E+G+++F S+ P +HYA
Sbjct: 516 AEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYA 575
Query: 346 CMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPH 405
C++D+LGRVG L+EA +++ +MPMEP + G+LLN+ R+HK V++ E A++L +EP
Sbjct: 576 CIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPE 635
Query: 406 NSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
+ +Y+LLSNIY+ GRW+E NVR + +K+ +KK++ SW+E
Sbjct: 636 RTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIE 678
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 159/371 (42%), Gaps = 75/371 (20%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPE---RSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
+++ YA+ G L AR F+ + + WN++L G + L+ M
Sbjct: 93 ANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR 152
Query: 70 GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
G D ++ +C LG L + ++ ++ N V LL ++ K G
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAG----- 207
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
R+GD A +LF +MP R+ +SWN MI G++Q +
Sbjct: 208 ------------------------RMGD---AYNLFVEMPVRNRMSWNVMIKGFSQEYDC 240
Query: 190 LMAIKLFKEMISTNDSKPDELTMVSVFSA---CG---------HLGSLS--------LGI 229
A+K+F E + + KPDE+T SV S CG HL +S L +
Sbjct: 241 ESAVKIF-EWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV 299
Query: 230 W--------AVSI---LNEYQIKLSILGY----NSLIFMYSRCGSMEEATLIFQEMATRD 274
+ A+SI ++ Y IK Y N+LI +Y + G +++A +F+++ +
Sbjct: 300 FFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG 359
Query: 275 LVSYNTLISGLASHGHGIECIKLISKMKE----DGIEPDRITYIGILTACSHAGLLEEGQ 330
+ S+N+LI+ G E + L S+++E ++ + +T+ ++ C+ G ++
Sbjct: 360 IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSL 419
Query: 331 KVFESIKVPDV 341
+ F ++ V
Sbjct: 420 EYFRQMQFSKV 430
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 113/246 (45%), Gaps = 7/246 (2%)
Query: 96 SIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARL 155
S+ D+ FH YF L + A+ AQ + ++R+ +IS YARL
Sbjct: 46 SLTSNNDQSLFH--YFDHLLGLCLTAQQCRQVHAQVLLSDF-IFRSGSLAANLISVYARL 102
Query: 156 GDLSFARDLFNKMPE---RDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTM 212
G L AR++F + D WNS++ +G A++L++ M D +
Sbjct: 103 GLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGM-RQRGLTGDGYIL 161
Query: 213 VSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMAT 272
+ AC +LG L + + + +K ++ N L+ +Y + G M +A +F EM
Sbjct: 162 PLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPV 221
Query: 273 RDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
R+ +S+N +I G + +K+ M+ + +PD +T+ +L+ S G E+ K
Sbjct: 222 RNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKY 281
Query: 333 FESIKV 338
F +++
Sbjct: 282 FHLMRM 287
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/456 (32%), Positives = 247/456 (54%), Gaps = 45/456 (9%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N T +V Y K G L A+ FD+M + V+ ++ GY Q+G A + ++LF D++
Sbjct: 218 NTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ G E D + V+ +C+SL + L + I + K+ S V T L+D + KC + +
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFE 337
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+A C A F ++ E + VSW+++I+GY Q
Sbjct: 338 SA---------------CRA-----------------FQEIREPNDVSWSAIISGYCQMS 365
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+ A+K FK + S N S + T S+F AC L ++G ++ IK S++G
Sbjct: 366 QFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIG----GQVHADAIKRSLIGS 421
Query: 248 ----NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
++LI MYS+CG +++A +F+ M D+V++ ISG A +G+ E ++L KM
Sbjct: 422 QYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS 481
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGKLE 358
G++P+ +T+I +LTACSHAGL+E+G+ +++ P +DHY CMID+ R G L+
Sbjct: 482 CGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 541
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
EA+K + +MP EP A + L+ HK +ELGE+A +L ++P +++ YVL N+Y
Sbjct: 542 EALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYT 601
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
AG+W+E + +M ++ +KK + SW++ +H
Sbjct: 602 WAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIH 637
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 194/466 (41%), Gaps = 76/466 (16%)
Query: 2 MGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVR 61
MG +V+ ++ Y + +L+ A FD+M E + VS M+S YA+ G + V
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF+ ML+SG++P + + T++ S + I + + SN ++T +++M+
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYV 230
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
KCG L A+ +FDQ+ V + V+C ++
Sbjct: 231 KCGWLVGAKRVFDQMAV-KKPVACTG-------------------------------LMV 258
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
GY Q G + A+KLF +++ T + D V AC L L+LG + + + ++
Sbjct: 259 GYTQAGRARDALKLFVDLV-TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
+ L+ Y +C S E A FQE+ + VS++ +ISG E +K +
Sbjct: 318 SEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Query: 302 KEDGIEP-DRITYIGILTACS-----------HA------------------------GL 325
+ + TY I ACS HA G
Sbjct: 378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGC 437
Query: 326 LEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPHAGIYGSLLNA 382
L++ +VFES+ PD+ + I G EA++L M M+P++ + ++L A
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497
Query: 383 TRIHKQVELGELAAAKL---FTVEPHNSSNYVLLSNIYALAGRWKE 425
VE G+ + + V P +Y + +IYA +G E
Sbjct: 498 CSHAGLVEQGKHCLDTMLRKYNVAP-TIDHYDCMIDIYARSGLLDE 542
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 260 bits (665), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 249/461 (54%), Gaps = 20/461 (4%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
RN VTW +++ Y + + A F +MP+R +WN M+SG+A G + LF +M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRK-LDKVKFHSNYFVKTALLDMHAKCGN 125
L S +PD T+ +++++CS+ + +V + K + S K ++L + K G+
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
A + + V VS N++I A ++G+ A ++F+ PE++ V+W +MI GY +
Sbjct: 256 RDDAMRELESIEVL-TQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGR 314
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
NG+ A++ F EM+ + D +V AC L L G +++ I
Sbjct: 315 NGDGEQALRFFVEMMKSG-VDSDHFAYGAVLHACSGLALLGHG----KMIHGCLIHCGFQ 369
Query: 246 GY----NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
GY N+L+ +Y++CG ++EA F ++A +DLVS+NT++ HG + +KL M
Sbjct: 370 GYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNM 429
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI----KVP-DVDHYACMIDMLGRVGK 356
GI+PD +T+IG+LT CSH+GL+EEG +FES+ ++P +VDH CMIDM GR G
Sbjct: 430 IASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGH 489
Query: 357 LEEAMKLIHS----MPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVL 412
L EA L + + + + +LL A H ELG + L EP ++VL
Sbjct: 490 LAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVL 549
Query: 413 LSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHV 453
LSN+Y GRWKE +VR M ++G+KK SW+E + V
Sbjct: 550 LSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQV 590
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 193/390 (49%), Gaps = 40/390 (10%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
+V T+ + AKSG + +AR FD MPE V+WN ML+ Y++ G E + LF +
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
S +PD+ ++ ++S+C+SLG+ I + + F ++ V +L+DM+ KC + +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 129 AQEIF-DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A ++F D RN V+ +++ AY A D+F +MP+R +WN MI+G+A G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCG 183
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACG------------HLGSLSLGIWAV--- 232
+ + LFKEM+ + + KPD T S+ +AC H L G W+
Sbjct: 184 KLESCLSLFKEMLES-EFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNG-WSSAVE 241
Query: 233 ---SILNEYQI---------------KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRD 274
S+L+ Y L+ + +NS+I + G E+A +F ++
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 275 LVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFE 334
+V++ T+I+G +G G + ++ +M + G++ D Y +L ACS LL G+ +
Sbjct: 302 IVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHG 361
Query: 335 SIKVPDVDHYA----CMIDMLGRVGKLEEA 360
+ YA ++++ + G ++EA
Sbjct: 362 CLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/456 (33%), Positives = 241/456 (52%), Gaps = 57/456 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T ++ Y+++ +K A I F++ +V+WNAM++GY QS +T++LF M G
Sbjct: 456 TALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
D+ T TV +C L + + K + + +V + +LDM+ KCG
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCG-------- 566
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
D+S A+ F+ +P D V+W +MI+G +NGE A
Sbjct: 567 ------------------------DMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN---- 248
+F +M PDE T+ ++ A L +L G QI + L N
Sbjct: 603 FHVFSQM-RLMGVLPDEFTIATLAKASSCLTALEQG---------RQIHANALKLNCTND 652
Query: 249 -----SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
SL+ MY++CGS+++A +F+ + ++ ++N ++ GLA HG G E ++L +MK
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLE 358
GI+PD++T+IG+L+ACSH+GL+ E K S+ P+++HY+C+ D LGR G ++
Sbjct: 713 LGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVK 772
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
+A LI SM ME A +Y +LL A R+ E G+ A KL +EP +SS YVLLSN+YA
Sbjct: 773 QAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYA 832
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
A +W E+ R +M+ VKK +SW+E + +H
Sbjct: 833 AASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 868
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 179/365 (49%), Gaps = 47/365 (12%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
+++ Y K AR FD M ER ++SWN++++G AQ+G +E V LF +L G +P
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 74 DETTWVTVISSCSSLGDP-CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
D+ T +V+ + SSL + L++ + K+ S+ FV TAL+D +++ +K A+ +
Sbjct: 415 DQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEIL 474
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
F++ D V+WN+M+AGY Q+ +
Sbjct: 475 FERHNF---------------------------------DLVAWNAMMAGYTQSHDGHKT 501
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSL 250
+KLF ++ + D+ T+ +VF CG L +++ G + A +I + Y + L + + +
Sbjct: 502 LKLFA-LMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV--SSGI 558
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
+ MY +CG M A F + D V++ T+ISG +G + S+M+ G+ PD
Sbjct: 559 LDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDE 618
Query: 311 ITYIGILTACSHAGLLEEGQKVF-ESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLI 364
T + A S LE+G+++ ++K+ P V ++DM + G +++A L
Sbjct: 619 FTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLF 676
Query: 365 HSMPM 369
+ M
Sbjct: 677 KRIEM 681
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/400 (29%), Positives = 185/400 (46%), Gaps = 50/400 (12%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+V Y K G +K ++ F++MP R VV WN ML Y + G E + L + SSG P+
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPN 245
Query: 75 ETTW--VTVIS-------SCSSLGDPCLAESIVRKLDKVKFHSNYFVK---TALLDMHA- 121
E T + IS S + A S+ + + K S Y +ALL A
Sbjct: 246 EITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFAD 305
Query: 122 ---------------------KCGNLKAAQEIFD---QLGVYRNSVSCNAMISAYARLGD 157
K +L Q++ +LG+ N++I+ Y +L
Sbjct: 306 MVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK 365
Query: 158 LSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS 217
FAR +F+ M ERD +SWNS+IAG AQNG + A+ LF +++ KPD+ TM SV
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG-LKPDQYTMTSVLK 424
Query: 218 ACGHLGSLSLGIWAVSILNEYQIKLSILG----YNSLIFMYSRCGSMEEATLIFQEMATR 273
A SL G+ ++ + IK++ + +LI YSR M+EA ++F E
Sbjct: 425 AA---SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNF 480
Query: 274 DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVF 333
DLV++N +++G G + +KL + M + G D T + C + +G++V
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 334 E-SIKVP-DVDHYAC--MIDMLGRVGKLEEAMKLIHSMPM 369
+IK D+D + ++DM + G + A S+P+
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV 580
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 187/404 (46%), Gaps = 52/404 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAAL-----ET 59
P+R ++ +++ Y+K G+L AR FDKMP+R +VSWN++L+ YAQS + +
Sbjct: 72 PERFLIN--NLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQA 129
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
LF + T ++ C G +ES K+ + FV AL+++
Sbjct: 130 FLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNI 189
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLG------DLSFARDLFNKMPERDT 173
+ K G +K + +F+++ YR+ V N M+ AY +G DLS A P T
Sbjct: 190 YLKFGKVKEGKVLFEEMP-YRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Query: 174 VSWNSMIAG--------------------------------YAQNGESLMAIKLFKEMIS 201
+ + I+G Y +G+ +K F +M+
Sbjct: 249 LRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 202 TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSME 261
+ D + D++T + + + + SL+LG + + + L + NSLI MY +
Sbjct: 309 S-DVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFG 367
Query: 262 EATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS 321
A +F M+ RDL+S+N++I+G+A +G +E + L ++ G++PD+ T +L A S
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Query: 322 H--AGLLEEGQKVFESIKVPDV-DHY--ACMIDMLGRVGKLEEA 360
GL Q +IK+ +V D + +ID R ++EA
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/447 (34%), Positives = 242/447 (54%), Gaps = 31/447 (6%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N+ T ++ Y G + F+ +P+ +VV+W +++SG+ + + + F +M
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
S+G + +ET V ++ +C D + L + F YF
Sbjct: 201 SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDP-YF---------------- 243
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
Q V N + ++I YA+ GDL AR LF+ MPER VSWNS+I GY+QNG
Sbjct: 244 -------QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
++ A+ +F +M+ + PD++T +SV A G LG + +++
Sbjct: 297 DAEEALCMFLDMLDLGIA-PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIV 355
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG-I 306
+L+ MY++ G E A F+++ +D +++ +I GLASHGHG E + + +M+E G
Sbjct: 356 CALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNA 415
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAM 361
PD ITY+G+L ACSH GL+EEGQ+ F ++ P V+HY CM+D+L R G+ EEA
Sbjct: 416 TPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAE 475
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAG 421
+L+ +MP++P+ I+G+LLN IH+ +EL + + + E S YVLLSNIYA AG
Sbjct: 476 RLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAG 535
Query: 422 RWKEVGNVRNIMRKQGVKKITAWSWVE 448
RW +V +R M+ + V K+ S VE
Sbjct: 536 RWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 171/376 (45%), Gaps = 48/376 (12%)
Query: 7 RNVVTWTTMV---TGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
RNV+ + ++ T ++ NL AR F+ + SV WN+M+ GY+ S + + +
Sbjct: 36 RNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFY 95
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+ML G PD T+ V+ +CS L D + + K F N +V T LL M+ C
Sbjct: 96 QEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCC 155
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G ++++ +F +P+ + V+W S+I+G+
Sbjct: 156 G--------------------------------EVNYGLRVFEDIPQWNVVAWGSLISGF 183
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN------- 236
N AI+ F+EM +N K +E MV + ACG + G W L
Sbjct: 184 VNNNRFSDAIEAFREM-QSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPY 242
Query: 237 -EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECI 295
+ ++ +++ SLI MY++CG + A +F M R LVS+N++I+G + +G E +
Sbjct: 243 FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEAL 302
Query: 296 KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDML 351
+ M + GI PD++T++ ++ A G + GQ + + V D +++M
Sbjct: 303 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMY 362
Query: 352 GRVGKLEEAMKLIHSM 367
+ G E A K +
Sbjct: 363 AKTGDAESAKKAFEDL 378
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 99/224 (44%), Gaps = 13/224 (5%)
Query: 157 DLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVF 216
+LS+AR +F + WNSMI GY+ + A+ ++EM+ S PD T V
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYS-PDYFTFPYVL 114
Query: 217 SACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV 276
AC L + G + + ++++ L+ MY CG + +F+++ ++V
Sbjct: 115 KACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVV 174
Query: 277 SYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI 336
++ +LISG ++ + I+ +M+ +G++ + + +L AC + G+ +
Sbjct: 175 AWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
Query: 337 KVPDVDHY------------ACMIDMLGRVGKLEEAMKLIHSMP 368
+ D Y +IDM + G L A L MP
Sbjct: 235 QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMP 278
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 255/471 (54%), Gaps = 53/471 (11%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G N + +V Y + + R FD M +R + WNAM++GY+Q+ E + L
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 63 FNDM-LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
F M S+G + TT V+ +C G E+I + K + FV+ L+DM++
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
+ G + A IF KM +RD V+WN+MI
Sbjct: 452 RLGKIDIAMRIF--------------------------------GKMEDRDLVTWNTMIT 479
Query: 182 GYAQNGESLMAIKLFKEM------ISTNDS----KPDELTMVSVFSACGHLGSLSLG--I 229
GY + A+ L +M +S S KP+ +T++++ +C L +L+ G I
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 230 WAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHG 289
A +I N +++ ++L+ MY++CG ++ + +F ++ ++++++N +I HG
Sbjct: 540 HAYAIKNNLATDVAV--GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHG 597
Query: 290 HGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHY 344
+G E I L+ M G++P+ +T+I + ACSH+G+++EG ++F +K P DHY
Sbjct: 598 NGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHY 657
Query: 345 ACMIDMLGRVGKLEEAMKLIHSMPMEPH-AGIYGSLLNATRIHKQVELGELAAAKLFTVE 403
AC++D+LGR G+++EA +L++ MP + + AG + SLL A+RIH +E+GE+AA L +E
Sbjct: 658 ACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLE 717
Query: 404 PHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
P+ +S+YVLL+NIY+ AG W + VR M++QGV+K SW+EH VH
Sbjct: 718 PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 768
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 207/500 (41%), Gaps = 87/500 (17%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N T+V Y K G L ++++ R +V+WN +LS Q+ LE + +M+
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESI-VRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
G EPDE T +V+ +CS L + + L N FV +AL+DM+ C +
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
+ + +FD M +R WN+MIAGY+QN
Sbjct: 355 LSGRRVFD--------------------------------GMFDRKIGLWNAMIAGYSQN 382
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
A+ LF M + + TM V AC G+ S + + +
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV 442
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK---- 302
N+L+ MYSR G ++ A IF +M RDLV++NT+I+G H + + L+ KM+
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 303 -------EDGIEPDRITYIGILTACS-----------HA--------------------- 323
++P+ IT + IL +C+ HA
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562
Query: 324 ---GLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME---PHAGIYG 377
G L+ +KVF+ I +V + +I G G +EA+ L+ M ++ P+ +
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFI 622
Query: 378 SLLNATRIHKQVELG---ELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMR 434
S+ A V+ G + VEP +S +Y + ++ AGR KE + N+M
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEP-SSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Query: 435 KQGVKKITAWSWVEHPSHVH 454
+ K AWS + S +H
Sbjct: 682 RD-FNKAGAWSSLLGASRIH 700
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 166/375 (44%), Gaps = 55/375 (14%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLS---GYAQSGAALETVRLFN 64
+V T+V Y K G+ FD++ ER+ VSWN+++S + + ALE R
Sbjct: 132 SVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRC-- 189
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDP--CLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
ML EP T V+V+++CS+L P + V K N F+ L+ M+ K
Sbjct: 190 -MLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGK 248
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
G L +++ + G RD V+WN++++
Sbjct: 249 LGKLASSKVLLGSFG--------------------------------GRDLVTWNTVLSS 276
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
QN + L A++ +EM+ +PDE T+ SV AC HL L G L+ Y +K
Sbjct: 277 LCQNEQLLEALEYLREMV-LEGVEPDEFTISSVLPACSHLEMLRTG----KELHAYALKN 331
Query: 243 SILGYNS-----LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKL 297
L NS L+ MY C + +F M R + +N +I+G + + H E + L
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 391
Query: 298 ISKMKED-GIEPDRITYIGILTACSHAGLLEEGQKV--FESIKVPDVDHYA--CMIDMLG 352
M+E G+ + T G++ AC +G + + F + D D + ++DM
Sbjct: 392 FIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 353 RVGKLEEAMKLIHSM 367
R+GK++ AM++ M
Sbjct: 452 RLGKIDIAMRIFGKM 466
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 144/299 (48%), Gaps = 38/299 (12%)
Query: 38 RSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESI 97
RS W +L +S E V + DM+ G +PD + ++ + + L D L + I
Sbjct: 60 RSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQI 119
Query: 98 VRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVS-CNAMISAYARLG 156
H++ + + G +SV+ N +++ Y + G
Sbjct: 120 ---------HAHVY-----------------------KFGYGVDSVTVANTLVNLYRKCG 147
Query: 157 DLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVF 216
D +F+++ ER+ VSWNS+I+ + MA++ F+ M+ N +P T+VSV
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN-VEPSSFTLVSVV 206
Query: 217 SACGHLGSLSLGIWAVSILNEYQIK---LSILGYNSLIFMYSRCGSMEEATLIFQEMATR 273
+AC +L + G+ ++ Y ++ L+ N+L+ MY + G + + ++ R
Sbjct: 207 TACSNL-PMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 265
Query: 274 DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
DLV++NT++S L + +E ++ + +M +G+EPD T +L ACSH +L G+++
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL-SILGYNSLIFMYSRCGSMEEAT 264
KPD ++ A L + LG + + ++ + S+ N+L+ +Y +CG
Sbjct: 94 KPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVY 153
Query: 265 LIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSH-- 322
+F ++ R+ VS+N+LIS L S ++ M ++ +EP T + ++TACS+
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 323 --AGLLEEGQKVFESIKVPDVDHYA--CMIDMLGRVGKLEEAMKLIHSM 367
GL+ Q ++ +++ + ++ M G++GKL + L+ S
Sbjct: 214 MPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSF 262
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 258 bits (659), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/458 (32%), Positives = 251/458 (54%), Gaps = 47/458 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V+ T+++ Y+K G + A F+ M +R++V+WN M+ YA++G + F M
Sbjct: 266 DVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMS 325
Query: 68 -SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
+G +PD T + ++ + + L + +R+ F + ++TAL+DM+ +CG L
Sbjct: 326 EQNGLQPDVITSINLLPASAILEGRTIHGYAMRR----GFLPHMVLETALIDMYGECGQL 381
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
K+ A +F++M E++ +SWNS+IA Y QN
Sbjct: 382 KS--------------------------------AEVIFDRMAEKNVISWNSIIAAYVQN 409
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSI 244
G++ A++LF+E+ ++ PD T+ S+ A SLS G I A + + Y I
Sbjct: 410 GKNYSALELFQELWDSS-LVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
L NSL+ MY+ CG +E+A F + +D+VS+N++I A HG G + L S+M
Sbjct: 469 L--NSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIAS 526
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEE 359
+ P++ T+ +L ACS +G+++EG + FES+K P ++HY CM+D++GR G
Sbjct: 527 RVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSA 586
Query: 360 AMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
A + + MP P A I+GSLLNA+R HK + + E AA ++F +E N+ YVLL N+YA
Sbjct: 587 AKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAE 646
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVHCET 457
AGRW++V ++ +M +G+ + ++ S VE H T
Sbjct: 647 AGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFT 684
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 173/369 (46%), Gaps = 45/369 (12%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
Q N T + G+A S ++ A FD+M + WN M+ G+ G +E V+ ++
Sbjct: 61 QVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSR 120
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M+ +G + D T+ VI S + + + I + K+ F S+ +V
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYV------------- 167
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
CN++IS Y +LG A +F +MPERD VSWNSMI+GY
Sbjct: 168 -------------------CNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLA 208
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLS 243
G+ ++ LFKEM+ KPD + +S AC H+ S +G I ++ + +
Sbjct: 209 LGDGFSSLMLFKEMLKCG-FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETG-D 266
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
++ S++ MYS+ G + A IF M R++V++N +I A +G + KM E
Sbjct: 267 VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE 326
Query: 304 -DGIEPDRITYIGILTACSHAGLLEEGQKV----FESIKVPDVDHYACMIDMLGRVGKLE 358
+G++PD IT I +L A + + EG+ + +P + +IDM G G+L+
Sbjct: 327 QNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLK 382
Query: 359 EAMKLIHSM 367
A + M
Sbjct: 383 SAEVIFDRM 391
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 186/388 (47%), Gaps = 50/388 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V ++++ Y K G A F++MPER +VSWN+M+SGY G ++ LF +ML
Sbjct: 164 DVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML 223
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHS-NYFVKTALLDMHAKCGNL 126
G +PD + ++ + +CS + P + + I + + + + V T++LDM++K G +
Sbjct: 224 KCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEV 283
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
A+ IF+ + + RN V+ N MI YAR G ++ A F KM E QN
Sbjct: 284 SYAERIFNGM-IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE--------------QN 328
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G +PD +T +++ A L + ++ Y ++ L
Sbjct: 329 G-----------------LQPDVITSINLLPASAILEGRT--------IHGYAMRRGFLP 363
Query: 247 Y----NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+ +LI MY CG ++ A +IF MA ++++S+N++I+ +G ++L ++
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQK----VFESIKVPDVDHYACMIDMLGRVGKLE 358
+ + PD T IL A + + L EG++ + +S + ++ M G LE
Sbjct: 424 DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLE 483
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIH 386
+A K + + ++ + S++ A +H
Sbjct: 484 DARKCFNHILLKDVVS-WNSIIMAYAVH 510
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 145/445 (32%), Positives = 242/445 (54%), Gaps = 46/445 (10%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y + G++ A F++MP+ VV W+ M++ + Q+G E V LF M + P+E T
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
++++ C+ L E + + KV F + +V AL+D+
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDV------------------- 392
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
YA+ + A LF ++ ++ VSWN++I GY GE A +F+E
Sbjct: 393 -------------YAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGI----WAVSILNEYQIKLSILGYNSLIFMY 254
+ N E+T S AC L S+ LG+ A+ N ++ +S NSLI MY
Sbjct: 440 ALR-NQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS----NSLIDMY 494
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
++CG ++ A +F EM T D+ S+N LISG ++HG G + ++++ MK+ +P+ +T++
Sbjct: 495 AKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFL 554
Query: 315 GILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
G+L+ CS+AGL+++GQ+ FES+ P ++HY CM+ +LGR G+L++AMKLI +P
Sbjct: 555 GVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY 614
Query: 370 EPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNV 429
EP I+ ++L+A+ E +A ++ + P + + YVL+SN+YA A +W V ++
Sbjct: 615 EPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASI 674
Query: 430 RNIMRKQGVKKITAWSWVEHPSHVH 454
R M++ GVKK SW+EH VH
Sbjct: 675 RKSMKEMGVKKEPGLSWIEHQGDVH 699
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 118/262 (45%), Gaps = 34/262 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++ ++ YAK + TA F ++ ++ VSWN ++ GY G + +F + L
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ E T+ + + +C+SL L + K V +L+DM+AKCG++K
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
AQ +F N+M D SWN++I+GY+ +G
Sbjct: 502 FAQSVF--------------------------------NEMETIDVASWNALISGYSTHG 529
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKLSILG 246
A+++ +++ D KP+ LT + V S C + G + G S++ ++ I+ +
Sbjct: 530 LGRQALRIL-DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEH 588
Query: 247 YNSLIFMYSRCGSMEEATLIFQ 268
Y ++ + R G +++A + +
Sbjct: 589 YTCMVRLLGRSGQLDKAMKLIE 610
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 155/357 (43%), Gaps = 47/357 (13%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ Y K+G K A FD+MPER+ VS+ + GYA + + L++ + G+E +
Sbjct: 90 LLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELN 145
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
+ + + SL + + + K+ + SN FV AL
Sbjct: 146 PHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAAL------------------ 187
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
I+AY+ G + AR +F + +D V W +++ Y +NG ++K
Sbjct: 188 --------------INAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLK 233
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSL--GIWAVSILNEYQIKLSILGYNSLIF 252
L M P+ T + A LG+ G+ IL + +G L+
Sbjct: 234 LLSCM-RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHG-QILKTCYVLDPRVGV-GLLQ 290
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
+Y++ G M +A +F EM D+V ++ +I+ +G E + L +M+E + P+ T
Sbjct: 291 LYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT 350
Query: 313 YIGILTACS---HAGLLEEGQKVFESIKVPDVDHYA--CMIDMLGRVGKLEEAMKLI 364
IL C+ +GL E+ + + D+D Y +ID+ + K++ A+KL
Sbjct: 351 LSSILNGCAIGKCSGLGEQLHGLVVKVGF-DLDIYVSNALIDVYAKCEKMDTAVKLF 406
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 113/235 (48%), Gaps = 25/235 (10%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N +++AY + G A +LF++MPER+ VS+ ++ GYA + +L +E N
Sbjct: 88 NILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELN-- 145
Query: 206 KPDELT-MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS-------LIFMYSRC 257
P T + +F + L + W S + + LGY+S LI YS C
Sbjct: 146 -PHVFTSFLKLFVS---LDKAEICPWLHSPIVK-------LGYDSNAFVGAALINAYSVC 194
Query: 258 GSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGIL 317
GS++ A +F+ + +D+V + ++S +G+ + +KL+S M+ G P+ T+ L
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 318 TACSHAGLLEEGQ----KVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
A G + + ++ ++ V D ++ + ++G + +A K+ + MP
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+ V +++ YAK G++K A+ F++M V SWNA++SGY+ G + +R+ + M
Sbjct: 482 KKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIM 541
Query: 67 LSSGNEPDETTWVTVISSCSSL-----GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
+P+ T++ V+S CS+ G C ES++R +Y T ++ +
Sbjct: 542 KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECF-ESMIRDHGIEPCLEHY---TCMVRLLG 597
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFAR---DLFNKMPERDTVSW-- 176
+ G L A ++ + + + + AM+SA + FAR + K+ +D ++
Sbjct: 598 RSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVL 657
Query: 177 -NSMIAGYAQNGESLMAIKLFKEM 199
++M AG Q K KEM
Sbjct: 658 VSNMYAGAKQWANVASIRKSMKEM 681
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 243/432 (56%), Gaps = 35/432 (8%)
Query: 44 NAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDK 103
N+++ YA S + +F +ML PD+ ++ V+ +C++ I K
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 104 VKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVY------------------------ 139
++ FV+ L++++ + G + A+++ D++ V
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 140 ------RNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAI 193
RN S N MIS YA G + A+++F+ MP RD VSWN+M+ YA G +
Sbjct: 229 FDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVL 288
Query: 194 KLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFM 253
++F +M+ + KPD T+VSV SAC LGSLS G W ++++ I++ +L+ M
Sbjct: 289 EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDM 348
Query: 254 YSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITY 313
YS+CG +++A +F+ + RD+ ++N++IS L+ HG G + +++ S+M +G +P+ IT+
Sbjct: 349 YSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITF 408
Query: 314 IGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
IG+L+AC+H G+L++ +K+FE + P ++HY CM+D+LGR+GK+EEA +L++ +P
Sbjct: 409 IGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
Query: 369 MEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGN 428
+ + + SLL A + Q+E E A +L + +SS Y +SN+YA GRW++V +
Sbjct: 469 ADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVID 528
Query: 429 VRNIMRKQGVKK 440
R MR + V +
Sbjct: 529 GRRNMRAERVNR 540
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 118/245 (48%), Gaps = 8/245 (3%)
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGD---LSFARDLFNKMPERDTVSWNSMIAG 182
++ A + G++ ++ S + +++ A + +S+A + N++ + + NS+I
Sbjct: 55 IQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRA 114
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
YA + +A+ +F+EM+ PD+ + V AC G + + +
Sbjct: 115 YANSSTPEVALTVFREML-LGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVT 173
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+ N+L+ +Y R G E A + M RD VS+N+L+S G E L +M+
Sbjct: 174 DVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME 233
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMK 362
E +E ++ +++ + AGL++E ++VF+S+ V DV + M+ VG E ++
Sbjct: 234 ERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLE 289
Query: 363 LIHSM 367
+ + M
Sbjct: 290 VFNKM 294
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 239/452 (52%), Gaps = 20/452 (4%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
+++ Y + N+ AR FD+M ER VSWNA+++ YA G E LF+ M SG E
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI- 132
TW + C G+ A ++ ++ + L + G ++ +EI
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 133 -------FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+D + RN+ +I+ Y++ DL A +F + E +WNS+I+GYAQ
Sbjct: 304 GLAIHSSYDGIDNVRNT-----LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQ 358
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEYQIKLSI 244
+S A L +EM+ +P+ +T+ S+ C + +L G + IL K
Sbjct: 359 LNKSEEASHLLREMLVAG-FQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYT 417
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
+ +NSL+ +Y++ G + A + M+ RD V+Y +LI G + G G + L +M
Sbjct: 418 MLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRS 477
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEE 359
GI+PD +T + +L+ACSH+ L+ EG+++F ++ P + H++CM+D+ GR G L +
Sbjct: 478 GIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAK 537
Query: 360 AMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
A +IH+MP +P + +LLNA IH ++G+ AA KL ++P N YVL++N+YA
Sbjct: 538 AKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAA 597
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVEHPS 451
AG W ++ VR IMR GVKK +W++ S
Sbjct: 598 AGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDS 629
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 153/297 (51%), Gaps = 10/297 (3%)
Query: 41 VSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRK 100
+ WN +++ YA++ E + + M+S G PD T+ +V+ +C D +
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 101 LDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSF 160
++ + S+ +V AL+ M+ + N+ A+ +FD++ R++VS NA+I+ YA G S
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRM-FERDAVSWNAVINCYASEGMWSE 228
Query: 161 ARDLFNKM----PERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVF 216
A +LF+KM E ++WN + G Q G + A+ L M + S D + M+
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSL-DPVAMIIGL 287
Query: 217 SACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRD 274
AC +G++ LG I ++I + Y ++ N+LI MYS+C + A ++F++
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNV--RNTLITMYSKCKDLRHALIVFRQTEENS 345
Query: 275 LVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK 331
L ++N++ISG A E L+ +M G +P+ IT IL C+ L+ G++
Sbjct: 346 LCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE 402
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 2/223 (0%)
Query: 102 DKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFA 161
D + HS + +A +D+ A ++ GV +SV +++ Y+ + A
Sbjct: 39 DDLVLHSAASLLSACVDVRAFLAGVQVHAHCISS-GVEYHSVLVPKLVTFYSAFNLHNEA 97
Query: 162 RDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGH 221
+ + + WN +IA YA+N I +K M+S +PD T SV ACG
Sbjct: 98 QSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKG-IRPDAFTYPSVLKACGE 156
Query: 222 LGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTL 281
++ G + K S+ N+LI MY R +M A +F M RD VS+N +
Sbjct: 157 TLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAV 216
Query: 282 ISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAG 324
I+ AS G E +L KM G+E IT+ I C G
Sbjct: 217 INCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 102/266 (38%), Gaps = 72/266 (27%)
Query: 12 WTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN 71
W ++V YAKSG + A+ D M +R V++ +++ GY G + LF +M SG
Sbjct: 420 WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGI 479
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
+PD T V V+S+CS HS + L M +C
Sbjct: 480 KPDHVTVVAVLSACS--------------------HSKLVHEGERLFMKMQC-------- 511
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+ G+ + M+ Y R G L+ A+D+ + MP
Sbjct: 512 ---EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPY--------------------- 547
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLI 251
KP T ++ +AC G+ +G WA L E +K GY LI
Sbjct: 548 --------------KPSGATWATLLNACHIHGNTQIGKWAAEKLLE--MKPENPGYYVLI 591
Query: 252 F-MYSRCGS---MEEATLIFQEMATR 273
MY+ GS + E I +++ +
Sbjct: 592 ANMYAAAGSWSKLAEVRTIMRDLGVK 617
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/455 (34%), Positives = 242/455 (53%), Gaps = 54/455 (11%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALE---TVRLFNDMLSSG 70
+++ YAK L AR FD VV +NAM+ GY++ G E + +F DM
Sbjct: 390 SLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRL 449
Query: 71 NEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
P T+V+++ + +SL L++ I + K + + F +AL+D+++ C LK +
Sbjct: 450 IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS- 508
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
R +F++M +D V WNSM AGY Q E+
Sbjct: 509 -------------------------------RLVFDEMKVKDLVIWNSMFAGYVQQSENE 537
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY--- 247
A+ LF E+ + +PDE T ++ +A G+L S+ LG E+ +L G
Sbjct: 538 EALNLFLEL-QLSRERPDEFTFANMVTAAGNLASVQLG-------QEFHCQLLKRGLECN 589
Query: 248 ----NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
N+L+ MY++CGS E+A F A+RD+V +N++IS A+HG G + ++++ KM
Sbjct: 590 PYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEE 359
+GIEP+ IT++G+L+ACSHAGL+E+G K FE + P+ +HY CM+ +LGR G+L +
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNK 709
Query: 360 AMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
A +LI MP +P A ++ SLL+ VEL E AA +P +S ++ +LSNIYA
Sbjct: 710 ARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYAS 769
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
G W E VR M+ +GV K SW+ VH
Sbjct: 770 KGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVH 804
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 151/322 (46%), Gaps = 48/322 (14%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R+V T ++ Y K GN+ AR+ FD +PE+S V+W M+SG + G + +++LF +
Sbjct: 181 RDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCL--AESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+ PD TV+S+CS L P L + I + + + + L+D + KCG
Sbjct: 241 MEDNVVPDGYILSTVLSACSIL--PFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCG 298
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ AA + LFN MP ++ +SW ++++GY
Sbjct: 299 RVIAAHK--------------------------------LFNGMPNKNIISWTTLLSGYK 326
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
QN A++LF M S KPD S+ ++C L +L G + ++ Y IK ++
Sbjct: 327 QNALHKEAMELFTSM-SKFGLKPDMYACSSILTSCASLHALGFG----TQVHAYTIKANL 381
Query: 245 ----LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISG---LASHGHGIECIKL 297
NSLI MY++C + +A +F A D+V +N +I G L + E + +
Sbjct: 382 GNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNI 441
Query: 298 ISKMKEDGIEPDRITYIGILTA 319
M+ I P +T++ +L A
Sbjct: 442 FRDMRFRLIRPSLLTFVSLLRA 463
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 186/413 (45%), Gaps = 77/413 (18%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML-SSGNEP 73
++ Y+++G + AR F+KMPER++VSW+ M+S G E++ +F + + + P
Sbjct: 85 LINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 74 DETTWVTVISSCSSLG--DPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
+E + I +CS L + + L K F + +V T L+D + K GN+
Sbjct: 145 NEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNID---- 200
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
YARL +F+ +PE+ TV+W +MI+G + G S +
Sbjct: 201 --------------------YARL--------VFDALPEKSTVTWTTMISGCVKMGRSYV 232
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLI 251
+++LF +++ N PD + +V SAC L L G + + Y +++ N LI
Sbjct: 233 SLQLFYQLMEDN-VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLI 291
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
Y +CG + A +F M ++++S+ TL+SG + E ++L + M + G++PD
Sbjct: 292 DSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMY 351
Query: 312 TYIGILTACS--HA---------------------------------GLLEEGQKVFESI 336
ILT+C+ HA L + +KVF+
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411
Query: 337 KVPDVDHYACMIDMLGRVG---KLEEAMKLIHSMP---MEPHAGIYGSLLNAT 383
DV + MI+ R+G +L EA+ + M + P + SLL A+
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS 464
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 159/335 (47%), Gaps = 35/335 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++ + ++ Y+ LK +R+ FD+M + +V WN+M +GY Q E + LF ++
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQ 547
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
S PDE T+ ++++ +L L + +L K N ++ ALLDM+AKCG+ +
Sbjct: 548 LSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPE 607
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A + FD R+ V N++IS+ YA +G
Sbjct: 608 DAHKAFDS-AASRDVVCWNSVISS-------------------------------YANHG 635
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
E A+++ ++M+S +P+ +T V V SAC H G + G+ ++ + I+ Y
Sbjct: 636 EGKKALQMLEKMMSEG-IEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHY 694
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRD-LVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
++ + R G + +A + ++M T+ + + +L+SG A G+ +E + ++M
Sbjct: 695 VCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN-VELAEHAAEMAILSD 753
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIKVPDV 341
D ++ + + G+ E +KV E +KV V
Sbjct: 754 PKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGV 788
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 120/243 (49%), Gaps = 16/243 (6%)
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
G+ ++ N +I+ Y+R G + +AR +F KMPER+ VSW++M++ +G ++ +F
Sbjct: 74 GLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVF 133
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS------- 249
E T P+E + S AC L G W V L + +K G++
Sbjct: 134 LEFWRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSFLVK---SGFDRDVYVGTL 188
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
LI Y + G+++ A L+F + + V++ T+ISG G ++L ++ ED + PD
Sbjct: 189 LIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPD 248
Query: 310 RITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYA----CMIDMLGRVGKLEEAMKLIH 365
+L+ACS LE G+++ I ++ A +ID + G++ A KL +
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 366 SMP 368
MP
Sbjct: 309 GMP 311
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 150/447 (33%), Positives = 241/447 (53%), Gaps = 39/447 (8%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N + V YAK G+L A+ F + ++V SWNA++ G+AQS ++ M
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SG PD T +++S+CS L L + + + + + FV ++L ++ CG L
Sbjct: 489 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 548
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
Q +FD M ++ VSWN++I GY QNG
Sbjct: 549 TVQALFD--------------------------------AMEDKSLVSWNTVITGYLQNG 576
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
A+ +F++M+ + ++M+ VF AC L SL LG A + ++ ++
Sbjct: 577 FPDRALGVFRQMVLYG-IQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 635
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
SLI MY++ GS+ +++ +F + + S+N +I G HG E IKL +M+ G
Sbjct: 636 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 695
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMK 362
PD +T++G+LTAC+H+GL+ EG + + +K P++ HYAC+IDMLGR G+L++A++
Sbjct: 696 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 755
Query: 363 LI-HSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAG 421
++ M E GI+ SLL++ RIH+ +E+GE AAKLF +EP NYVLLSN+YA G
Sbjct: 756 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 815
Query: 422 RWKEVGNVRNIMRKQGVKKITAWSWVE 448
+W++V VR M + ++K SW+E
Sbjct: 816 KWEDVRKVRQRMNEMSLRKDAGCSWIE 842
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 154/327 (47%), Gaps = 46/327 (14%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
V T ++T YA G+ +R FD + +++ WNA++S Y+++ E + F +M+S+
Sbjct: 121 VLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIST 180
Query: 70 GN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
+ PD T+ VI +C+ + D + ++ + K + FV AL+ + G +
Sbjct: 181 TDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD 240
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
A ++FD MPER+ VSWNSMI ++ NG
Sbjct: 241 ALQLFD--------------------------------IMPERNLVSWNSMIRVFSDNGF 268
Query: 189 SLMAIKLFKEMISTNDSK---PDELTMVSVFSACGHLGSLSLGI----WAVSILNEYQIK 241
S + L EM+ N PD T+V+V C + LG WAV + + ++
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
L+ N+L+ MYS+CG + A +IF+ +++VS+NT++ G ++ G ++ +M
Sbjct: 329 LN----NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 302 KEDG--IEPDRITYIGILTACSHAGLL 326
G ++ D +T + + C H L
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/471 (23%), Positives = 201/471 (42%), Gaps = 89/471 (18%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V +V+ Y G + A FD MPER++VSWN+M+ ++ +G + E+ L +M+
Sbjct: 221 DVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMM 280
Query: 68 SSGNE----PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+ PD T VTV+ C+ + L + + K++ + AL+DM++KC
Sbjct: 281 EENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC 340
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM------PERDTVSW- 176
G + AQ IF ++ +N VS N M+ ++ GD D+ +M + D V+
Sbjct: 341 GCITNAQMIF-KMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTIL 399
Query: 177 ----------------------------------NSMIAGYAQNGESLMAIKLFKEMIS- 201
N+ +A YA+ G A ++F + S
Sbjct: 400 NAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSK 459
Query: 202 --------------TNDSK---------------PDELTMVSVFSACGHLGSLSLGIWAV 232
+ND + PD T+ S+ SAC L SL LG
Sbjct: 460 TVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVH 519
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGI 292
+ ++ + Y S++ +Y CG + +F M + LVS+NT+I+G +G
Sbjct: 520 GFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPD 579
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFE-SIK--VPDVDHYAC-MI 348
+ + +M GI+ I+ + + ACS L G++ ++K + D AC +I
Sbjct: 580 RALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLI 639
Query: 349 DMLGRVGKLEEAMKLIHSMPMEPHA---------GIYGSLLNATRIHKQVE 390
DM + G + ++ K+ + + + A GI+G A ++ ++++
Sbjct: 640 DMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQ 690
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 152/308 (49%), Gaps = 38/308 (12%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+R++ + ++++ Y G L T + FD M ++S+VSWN +++GY Q+G + +F
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M+ G + + + V +CS L L K + F+ +L+DM+AK G+
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+ + ++F N + E+ T SWN+MI GY
Sbjct: 648 ITQSSKVF--------------------------------NGLKEKSTASWNAMIMGYGI 675
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEYQIKLSI 244
+G + AIKLF+EM T + PD+LT + V +AC H G + G+ + + + + +K ++
Sbjct: 676 HGLAKEAIKLFEEMQRTGHN-PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 245 LGYNSLIFMYSRCGSMEEA-TLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMK 302
Y +I M R G +++A ++ +EM+ D+ + +L+S H + K+ +K+
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 303 EDGIEPDR 310
E +EP++
Sbjct: 795 E--LEPEK 800
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 92/185 (49%), Gaps = 4/185 (2%)
Query: 141 NSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMI 200
+ V C +I+ YA G +R +F+ + ++ WN++I+ Y++N ++ F EMI
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 201 STNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSM 260
ST D PD T V AC + + +G+ ++ + + + N+L+ Y G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 261 EEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED----GIEPDRITYIGI 316
+A +F M R+LVS+N++I + +G E L+ +M E+ PD T + +
Sbjct: 239 TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTV 298
Query: 317 LTACS 321
L C+
Sbjct: 299 LPVCA 303
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 247/443 (55%), Gaps = 11/443 (2%)
Query: 20 AKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN--EPDETT 77
A ++ A + F ++ ++ WN ++ G+++S + +F DML S +P T
Sbjct: 69 ASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLT 128
Query: 78 WVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG 137
+ +V + LG + + K + F++ +L M+ CG L A IF LG
Sbjct: 129 YPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIF--LG 186
Query: 138 -VYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
+ + V+ N+MI +A+ G + A++LF++MP+R+ VSWNSMI+G+ +NG A+ +F
Sbjct: 187 MIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMF 246
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSR 256
+EM D KPD TMVS+ +AC +LG+ G W + + +L+ + +LI MY +
Sbjct: 247 REM-QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK 305
Query: 257 CGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGI 316
CG +EE +F+ + L +N++I GLA++G + L S+++ G+EPD +++IG+
Sbjct: 306 CGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGV 365
Query: 317 LTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEP 371
LTAC+H+G + + F +K P + HY M+++LG G LEEA LI +MP+E
Sbjct: 366 LTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE 425
Query: 372 HAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRN 431
I+ SLL+A R VE+ + AA L ++P + YVLLSN YA G ++E R
Sbjct: 426 DTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRL 485
Query: 432 IMRKQGVKKITAWSWVEHPSHVH 454
+M+++ ++K S +E VH
Sbjct: 486 LMKERQMEKEVGCSSIEVDFEVH 508
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 160/325 (49%), Gaps = 38/325 (11%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+VV W +M+ G+AK G + A+ FD+MP+R+ VSWN+M+SG+ ++G + + +F +M
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+PD T V+++++C+ LG I + + +F N V TAL+DM+ KCG ++
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+F+ C P++ WNSMI G A NG
Sbjct: 311 EGLNVFE----------C----------------------APKKQLSCWNSMILGLANNG 338
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLSILG 246
A+ LF E+ + +PD ++ + V +AC H G + ++ E Y I+ SI
Sbjct: 339 FEERAMDLFSEL-ERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKH 397
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMAT-RDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
Y ++ + G +EEA + + M D V +++L+S G+ +E K +K +
Sbjct: 398 YTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGN-VEMAKRAAKCLKK- 455
Query: 306 IEPDRIT-YIGILTACSHAGLLEEG 329
++PD Y+ + A + GL EE
Sbjct: 456 LDPDETCGYVLLSNAYASYGLFEEA 480
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 262/516 (50%), Gaps = 84/516 (16%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS-SGN 71
T +V YAK G L+ A FD+MP+R +V+WNAM+SG++ + + LF DM G
Sbjct: 142 TALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGL 201
Query: 72 EPDETTWVTVISS----------------CSSLG---DPCLAESIV------------RK 100
P+ +T V + + C+ +G D + I+ R+
Sbjct: 202 SPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR 261
Query: 101 LDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRN------------------- 141
+ + F N +A++ + + +K A E+F Q+ V N
Sbjct: 262 VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARF 321
Query: 142 -------SVSC--------------NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
V C N +IS YA+ G L A F+++ +D +S+NS+I
Sbjct: 322 GDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLI 381
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEY 238
G N + +LF EM T+ +PD T++ V +AC HL +L G +++ Y
Sbjct: 382 TGCVVNCRPEESFRLFHEM-RTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGY 440
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
+ SI N+L+ MY++CG ++ A +F M RD+VS+NT++ G HG G E + L
Sbjct: 441 AVNTSIC--NALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLF 498
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK------VPDVDHYACMIDMLG 352
+ M+E G+ PD +T + IL+ACSH+GL++EG+++F S+ +P +DHY CM D+L
Sbjct: 499 NSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLA 558
Query: 353 RVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVL 412
R G L+EA ++ MP EP + G+LL+A +K ELG + K+ ++ + + VL
Sbjct: 559 RAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-GETTESLVL 617
Query: 413 LSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
LSN Y+ A RW++ +R I +K+G+ K +SWV+
Sbjct: 618 LSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVD 653
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 164/390 (42%), Gaps = 75/390 (19%)
Query: 19 YAKSGNLKTARIYFDKMPERSV--VSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDET 76
YA ++ AR FD++P + ++W+ M+ YA + A + + L+ ML+SG P +
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 77 TWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL 136
T+ V+ +C+ L R +D K L+ H C + +
Sbjct: 105 TYPFVLKACAGL----------RAIDDGK----------LIHSHVNCSDFATDMYV---- 140
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
C A++ YA+ G+L A +F++MP+RD V+WN+MI+G++ + I LF
Sbjct: 141 --------CTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLF 192
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLG----------------IWAVSILNEY-- 238
+M + P+ T+V +F A G G+L G + IL+ Y
Sbjct: 193 LDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAK 252
Query: 239 -------------QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNT----- 280
K + + ++++I Y ++EA +F +M D V+ T
Sbjct: 253 SKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIG 312
Query: 281 -LISGLASHGH--GIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
++ G A G G C+ + + G D I++ + G L + + F I
Sbjct: 313 LILMGCARFGDLSGGRCVHCYA--VKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG 370
Query: 338 VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
+ DV Y +I + EE+ +L H M
Sbjct: 371 LKDVISYNSLITGCVVNCRPEESFRLFHEM 400
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF-----MYSRCGSMEEATLI 266
+S+ C +L LG +++++ +K S+ +S + +Y+ C +E A +
Sbjct: 2 FLSLLETCIRSRNLVLG----QVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHV 57
Query: 267 FQEMATRDL--VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAG 324
F E+ + ++++ +I AS+ + + L KM G+ P + TY +L AC+
Sbjct: 58 FDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLR 117
Query: 325 LLEEGQKVFESIKVPD--VDHYAC--MIDMLGRVGKLEEAMKLIHSMP 368
+++G+ + + D D Y C ++D + G+LE A+K+ MP
Sbjct: 118 AIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 254 bits (650), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 235/428 (54%), Gaps = 37/428 (8%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F + + +N M+ GY + E + +N+M+ GNEPD T+ ++ +C+ L
Sbjct: 89 FRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSI 148
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
+ I ++ K+ ++ FV+ +L++M
Sbjct: 149 REGKQIHGQVFKLGLEADVFVQNSLINM-------------------------------- 176
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
Y R G++ + +F K+ + SW+SM++ A G + LF+ M S + K +E
Sbjct: 177 YGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESG 236
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
MVS AC + G+L+LG+ L +L+I+ SL+ MY +CG +++A IFQ+M
Sbjct: 237 MVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKME 296
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK 331
R+ ++Y+ +ISGLA HG G +++ SKM ++G+EPD + Y+ +L ACSH+GL++EG++
Sbjct: 297 KRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRR 356
Query: 332 VFESI----KV-PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIH 386
VF + KV P +HY C++D+LGR G LEEA++ I S+P+E + I+ + L+ R+
Sbjct: 357 VFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVR 416
Query: 387 KQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSW 446
+ +ELG++AA +L + HN +Y+L+SN+Y+ W +V R + +G+K+ +S
Sbjct: 417 QNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSI 476
Query: 447 VEHPSHVH 454
VE H
Sbjct: 477 VELKGKTH 484
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 133/279 (47%), Gaps = 36/279 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V +++ Y + G ++ + F+K+ ++ SW++M+S A G E + LF M
Sbjct: 166 DVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMC 225
Query: 68 SSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
S N + +E+ V+ + +C++ G L SI L + N V+T+L+DM+ KCG L
Sbjct: 226 SETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCL 285
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
A IF ++ RN+++ +AMIS G A +
Sbjct: 286 DKALHIFQKME-KRNNLTYSAMIS-------------------------------GLALH 313
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVS-ILNEYQIKLSIL 245
GE A+++F +MI +PD + VSV +AC H G + G + +L E +++ +
Sbjct: 314 GEGESALRMFSKMIKEG-LEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAE 372
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMAT-RDLVSYNTLIS 283
Y L+ + R G +EEA Q + ++ V + T +S
Sbjct: 373 HYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 254 bits (649), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 246/457 (53%), Gaps = 47/457 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N + ++ YA+ G L +AR FD++ SWN +++G A +G A E V +F+ M
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SSG PD + +++ C+ L++ + + HS Y +K
Sbjct: 364 SSGFIPDAISLRSLL--CAQTKPMALSQGM-------QIHS-YIIK-------------- 399
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER-DTVSWNSMIAGYAQN 186
G + CN++++ Y DL +LF D+VSWN+++ Q+
Sbjct: 400 --------WGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI-- 244
+ + ++LFK M+ ++ +PD +TM ++ C + SL LG S ++ Y +K +
Sbjct: 452 EQPVEMLRLFKLML-VSECEPDHITMGNLLRGCVEISSLKLG----SQVHCYSLKTGLAP 506
Query: 245 --LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
N LI MY++CGS+ +A IF M RD+VS++TLI G A G G E + L +MK
Sbjct: 507 EQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMK 566
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKL 357
GIEP+ +T++G+LTACSH GL+EEG K++ +++ P +H +C++D+L R G+L
Sbjct: 567 SAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRL 626
Query: 358 EEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIY 417
EA + I M +EP ++ +LL+A + V L + AA + ++P NS+ +VLL +++
Sbjct: 627 NEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMH 686
Query: 418 ALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
A +G W+ +R+ M+K VKKI SW+E +H
Sbjct: 687 ASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIH 723
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 163/322 (50%), Gaps = 32/322 (9%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+++ Y K G+L+ AR FD MPER++VS+ ++++GY+Q+G E +RL+ ML PD
Sbjct: 108 ILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD 167
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
+ + ++I +C+S D L + +HA+ L+++ +
Sbjct: 168 QFAFGSIIKACASSSDVGLGK----------------------QLHAQVIKLESSSHLIA 205
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
Q NA+I+ Y R +S A +F +P +D +SW+S+IAG++Q G A+
Sbjct: 206 Q----------NALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALS 255
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
KEM+S P+E S AC L G + + ++ + + SL MY
Sbjct: 256 HLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMY 315
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
+RCG + A +F ++ D S+N +I+GLA++G+ E + + S+M+ G PD I+
Sbjct: 316 ARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 315 GILTACSHAGLLEEGQKVFESI 336
+L A + L +G ++ I
Sbjct: 376 SLLCAQTKPMALSQGMQIHSYI 397
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 170/371 (45%), Gaps = 41/371 (11%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
E +++ ++ Y + + A F +P + ++SW+++++G++Q G E +
Sbjct: 198 ESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHL 257
Query: 64 NDMLSSG-NEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
+MLS G P+E + + + +CSSL P I K + N +L DM+A+
Sbjct: 258 KEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYAR 317
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER-DTVSWNSMIA 181
CG L +A+ +FDQ+ ER DT SWN +IA
Sbjct: 318 CGFLNSARRVFDQI---------------------------------ERPDTASWNVIIA 344
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
G A NG + A+ +F +M S+ PD +++ S+ A +LS G+ S + ++
Sbjct: 345 GLANNGYADEAVSVFSQMRSSG-FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISK 300
+ NSL+ MY+ C + +F++ D VS+NT+++ H +E ++L
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVF-ESIKV---PDVDHYACMIDMLGRVGK 356
M EPD IT +L C L+ G +V S+K P+ +IDM + G
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGS 523
Query: 357 LEEAMKLIHSM 367
L +A ++ SM
Sbjct: 524 LGQARRIFDSM 534
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 121/258 (46%), Gaps = 37/258 (14%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N ++S Y + G L AR++F+ MPER+ VS+ S+I GY+QNG+ AI+L+ +M+ D
Sbjct: 106 NHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ-EDL 164
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
PD+ S+ AC + LG + + + + ++ N+LI MY R M +A+
Sbjct: 165 VPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASR 224
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI-EPDRITYIGILTACS--- 321
+F + +DL+S++++I+G + G E + + +M G+ P+ + L ACS
Sbjct: 225 VFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLL 284
Query: 322 --------------------------------HAGLLEEGQKVFESIKVPDVDHYACMID 349
G L ++VF+ I+ PD + +I
Sbjct: 285 RPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIA 344
Query: 350 MLGRVGKLEEAMKLIHSM 367
L G +EA+ + M
Sbjct: 345 GLANNGYADEAVSVFSQM 362
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 211 TMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
T +S+ AC SL+ G + K + N ++ MY +CGS+ +A +F M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 271 ATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQ 330
R+LVSY ++I+G + +G G E I+L KM ++ + PD+ + I+ AC+ + + G+
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 331 KVF-ESIKVPDVDHYA---CMIDMLGRVGKLEEAMKLIHSMPME 370
++ + IK+ H +I M R ++ +A ++ + +PM+
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMK 232
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 161/494 (32%), Positives = 263/494 (53%), Gaps = 58/494 (11%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
++NVVTWT+MV GY + G+++ A F +MPER++VSW AM+SG+A + E + LF +
Sbjct: 228 EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLE 287
Query: 66 MLSSGN--EPDETTWVTVISSCSSLG------------------------DPCLAESIVR 99
M + P+ T +++ +C LG D LA+S+V
Sbjct: 288 MKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVH 347
Query: 100 KLDKVKFHSNYFVKTA---------------LLDMHAKCGNLKAAQEIFDQLGVYRNSVS 144
+ S+ + +A +++ + K G+L+ A+ +F+++ + VS
Sbjct: 348 M-----YASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVS 402
Query: 145 CNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTND 204
+MI Y GD+S A LF K+ ++D V+W MI+G QN A L +M+
Sbjct: 403 WTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCG- 461
Query: 205 SKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEE 262
KP T + S+ G +L G I V ++ NSL+ MY++CG++E+
Sbjct: 462 LKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIED 521
Query: 263 ATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSH 322
A IF +M +D VS+N++I GL+ HG + + L +M + G +P+ +T++G+L+ACSH
Sbjct: 522 AYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSH 581
Query: 323 AGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYG 377
+GL+ G ++F+++K P +DHY MID+LGR GKL+EA + I ++P P +YG
Sbjct: 582 SGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYG 641
Query: 378 SLLNATRIH---KQVE-LGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIM 433
+LL ++ K E + E AA +L ++P N+ +V L N+YA GR +R M
Sbjct: 642 ALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEM 701
Query: 434 RKQGVKKITAWSWV 447
+GVKK SWV
Sbjct: 702 GIKGVKKTPGCSWV 715
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 197/474 (41%), Gaps = 124/474 (26%)
Query: 5 PQR----NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETV 60
PQR VV WT++++ YAK+G L AR+ F+ MPER++V+ NAML+GY + E
Sbjct: 69 PQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAW 128
Query: 61 RLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
LF +M + +W ++ ++L D +E V D++ N L+
Sbjct: 129 TLFREM-----PKNVVSWTVML---TALCDDGRSEDAVELFDEMP-ERNVVSWNTLVTGL 179
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMIS------------------------------ 150
+ G+++ A+++FD + R+ VS NAMI
Sbjct: 180 IRNGDMEKAKQVFDAMPS-RDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMV 238
Query: 151 -AYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS-KPD 208
Y R GD+ A LF +MPER+ VSW +MI+G+A N A+ LF EM D+ P+
Sbjct: 239 YGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPN 298
Query: 209 ELTMVSVFSACGHLG-------------------------------------SLSLGIWA 231
T++S+ ACG LG S L A
Sbjct: 299 GETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASA 358
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIF------------------------ 267
S+LNE + N +I Y + G +E A +F
Sbjct: 359 QSLLNE---SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGD 415
Query: 268 --------QEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTA 319
Q++ +D V++ +ISGL + E L+S M G++P TY +L++
Sbjct: 416 VSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSS 475
Query: 320 CSHAGLLEEGQKVFESIKV------PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
L++G+ + I PD+ ++ M + G +E+A ++ M
Sbjct: 476 AGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM 529
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 260/496 (52%), Gaps = 48/496 (9%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVR 61
RN+ +W ++++ Y K G + A D+M + +V+WN++LSGYA G + + +
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
+ M +G +P ++ +++ + + G L ++I + + + + +V+T L+DM+
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 122 KCGNLKAAQEIFDQL----------------------------------GVYRNSVSCNA 147
K G L A+ +FD + G+ ++++ N+
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 148 MISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTN 203
+ S YA LG A D+ KM E+ + VSW ++ +G ++NG A+K+F +M
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM-QEE 390
Query: 204 DSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEA 263
P+ TM ++ G L L G + +L+ MY + G ++ A
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 264 TLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHA 323
IF + + L S+N ++ G A G G E I S M E G+EPD IT+ +L+ C ++
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Query: 324 GLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGS 378
GL++EG K F+ ++ +P ++H +CM+D+LGR G L+EA I +M ++P A I+G+
Sbjct: 511 GLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGA 570
Query: 379 LLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGV 438
L++ +IH+ +EL E+A +L +EPHNS+NY+++ N+Y+ RW++V +RN+MR V
Sbjct: 571 FLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRV 630
Query: 439 KKITAWSWVEHPSHVH 454
+ WSW++ VH
Sbjct: 631 RVQDLWSWIQIDQTVH 646
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 188/373 (50%), Gaps = 13/373 (3%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y + +L A FD+MP+R ++WN ++ +SG + V LF +M SG + ++T
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
V ++ CS+ I + ++ SN + +L+ M+++ G L+ ++++F+ +
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERDTVSWNSMIAGYAQNGESLMAIK 194
RN S N+++S+Y +LG + A L ++M + D V+WNS+++GYA G S AI
Sbjct: 153 -RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
+ K M KP ++ S+ A G L LG + Q+ + +LI MY
Sbjct: 212 VLKRM-QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
+ G + A ++F M +++V++N+L+SGL+ + L+ +M+++GI+PD IT+
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWN 330
Query: 315 GILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME 370
+ + + G E+ V +K P+V + + + G A+K+ M E
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 371 ---PHAGIYGSLL 380
P+A +LL
Sbjct: 391 GVGPNAATMSTLL 403
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
+A + Y R L FA LF++MP+RD ++WN ++ ++G A++LF+EM + +
Sbjct: 27 SASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREM-QFSGA 85
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
K + TMV + C + + G + ++ ++ NSLI MYSR G +E +
Sbjct: 86 KAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRK 145
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGL 325
+F M R+L S+N+++S G+ + I L+ +M+ G++PD +T+ +L+ + GL
Sbjct: 146 VFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGL 205
Query: 326 LEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLN 381
++ V + +++ P + ++ + G L+ K IH + Y +
Sbjct: 206 SKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG-KAIHGYILRNQL-WYDVYVE 263
Query: 382 ATRIHKQVELGELAAAKL 399
T I ++ G L A++
Sbjct: 264 TTLIDMYIKTGYLPYARM 281
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/451 (31%), Positives = 244/451 (54%), Gaps = 45/451 (9%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ +V ++++ Y K G + A + F KM +R V+ W M++G+AQ+G +L+ V + +
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M + G D + ++ + LGD + S+ L + N V+T+L+DM
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDM------ 261
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
YA++G + A +F++M + VSW S+I+G+AQ
Sbjct: 262 --------------------------YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQ 295
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
NG + A + EM S +PD +T+V V AC +GSL G +++ Y +K +L
Sbjct: 296 NGLANKAFEAVVEMQSLG-FQPDLVTLVGVLVACSQVGSLKTG----RLVHCYILKRHVL 350
Query: 246 GY---NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+L+ MYS+CG++ + IF+ + +DLV +NT+IS HG+G E + L KM
Sbjct: 351 DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMT 410
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESI----KV-PDVDHYACMIDMLGRVGKL 357
E IEPD T+ +L+A SH+GL+E+GQ F + K+ P HY C+ID+L R G++
Sbjct: 411 ESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRV 470
Query: 358 EEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIY 417
EEA+ +I+S ++ I+ +LL+ H+ + +G++AA K+ + P + L+SN +
Sbjct: 471 EEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFF 530
Query: 418 ALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
A A +WKEV VR +MR ++K+ +S +E
Sbjct: 531 ATANKWKEVAKVRKLMRNGAMEKVPGYSAIE 561
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/457 (24%), Positives = 211/457 (46%), Gaps = 74/457 (16%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ + G + AR FD++P+R V +N+M+ Y++ E +RL++ M++ +PD
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPD 115
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
+T+ I +C S E++ K + ++ FV
Sbjct: 116 SSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFV---------------------- 153
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
C+++++ Y + G + A LF KM +RD + W +M+ G+AQ G+SL A++
Sbjct: 154 ----------CSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVE 203
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
++EM + + D + M+ + A G LG +G L + ++++ SL+ MY
Sbjct: 204 FYREMQNEGFGR-DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMY 262
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
++ G +E A+ +F M + VS+ +LISG A +G + + + +M+ G +PD +T +
Sbjct: 263 AKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLV 322
Query: 315 GILTACSHAGLLEEG----------------------------------QKVFESIKVPD 340
G+L ACS G L+ G +++FE + D
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKD 382
Query: 341 VDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNATRIHKQVELGELAAA 397
+ + MI G G +E + L M +EP + SLL+A VE G+ +
Sbjct: 383 LVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFS 442
Query: 398 KL---FTVEPHNSSNYVLLSNIYALAGRWKEVGNVRN 431
+ + ++P + +YV L ++ A AGR +E ++ N
Sbjct: 443 VMINKYKIQP-SEKHYVCLIDLLARAGRVEEALDMIN 478
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 253/453 (55%), Gaps = 39/453 (8%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++ + ++ Y K + A+ F + VV + AM+SGY +G ++++ +F ++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
P+E T V+++ P + + KL + + H + +K
Sbjct: 434 KVKISPNEITLVSIL--------PVIGILLALKLGR-ELH-GFIIKKG------------ 471
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
FD R ++ C A+I YA+ G ++ A ++F ++ +RD VSWNSMI AQ+
Sbjct: 472 -----FDN----RCNIGC-AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSD 521
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
AI +F++M + D +++ + SAC +L S S G + ++ + +
Sbjct: 522 NPSAAIDIFRQM-GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE 580
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE-DGI 306
++LI MY++CG+++ A +F+ M +++VS+N++I+ +HG + + L +M E GI
Sbjct: 581 STLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAM 361
PD+IT++ I+++C H G ++EG + F S+ P +HYAC++D+ GR G+L EA
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAG 421
+ + SMP P AG++G+LL A R+HK VEL E+A++KL ++P NS YVL+SN +A A
Sbjct: 701 ETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAR 760
Query: 422 RWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
W+ V VR++M+++ V+KI +SW+E H
Sbjct: 761 EWESVTKVRSLMKEREVQKIPGYSWIEINKRTH 793
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 174/361 (48%), Gaps = 41/361 (11%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
++++ Y+K G A F M V+WN M+SGY QSG E++ F +M+SSG
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
PD T+ +++ S S + + I + + + F+ +AL+D + KC + AQ I
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
F Q CN++ D V + +MI+GY NG + +
Sbjct: 398 FSQ---------CNSV-----------------------DVVVFTAMISGYLHNGLYIDS 425
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSL 250
+++F+ ++ S P+E+T+VS+ G L +L LG + I + + +I ++
Sbjct: 426 LEMFRWLVKVKIS-PNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI--GCAV 482
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
I MY++CG M A IF+ ++ RD+VS+N++I+ A + I + +M GI D
Sbjct: 483 IDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDC 542
Query: 311 ITYIGILTACSHAGLLEEGQKV----FESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHS 366
++ L+AC++ G+ + + DV + +IDM + G L+ AM + +
Sbjct: 543 VSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT 602
Query: 367 M 367
M
Sbjct: 603 M 603
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 161/366 (43%), Gaps = 41/366 (11%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N ++++ Y + G + FD++ ++ V WN ML+GYA+ GA ++ F+ M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 68 SSGNEPDETTWVTVISSCSS--LGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
P+ T+ V+S C+S L D + + + V F + +K +LL M++KCG
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGS--IKNSLLSMYSKCGR 289
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
A ++F M DTV+WN MI+GY Q
Sbjct: 290 FDDASKLF--------------------------------RMMSRADTVTWNCMISGYVQ 317
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
+G ++ F EMIS+ PD +T S+ + +L + + I L I
Sbjct: 318 SGLMEESLTFFYEMISSG-VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIF 376
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
++LI Y +C + A IF + + D+V + +ISG +G I+ +++ + +
Sbjct: 377 LTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVK 436
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHY----ACMIDMLGRVGKLEEAM 361
I P+ IT + IL L+ G+++ I D+ +IDM + G++ A
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY 496
Query: 362 KLIHSM 367
++ +
Sbjct: 497 EIFERL 502
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 140/316 (44%), Gaps = 35/316 (11%)
Query: 19 YAKSGNLKTARIYFDKMPER--SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDET 76
YA G+ F ++ R S+ WN+++S + ++G + + + ML G PD +
Sbjct: 80 YAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVS 139
Query: 77 TWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL 136
T+ ++ +C +L + + F S + L
Sbjct: 140 TFPCLVKACVAL----------KNFKGIDFLS----------------------DTVSSL 167
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
G+ N +++I AY G + LF+++ ++D V WN M+ GYA+ G IK F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSR 256
M + P+ +T V S C + LG+ ++ + NSL+ MYS+
Sbjct: 228 SVM-RMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSK 286
Query: 257 CGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGI 316
CG ++A+ +F+ M+ D V++N +ISG G E + +M G+ PD IT+ +
Sbjct: 287 CGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 317 LTACSHAGLLEEGQKV 332
L + S LE +++
Sbjct: 347 LPSVSKFENLEYCKQI 362
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 104/226 (46%), Gaps = 7/226 (3%)
Query: 148 MISAYARLGDLSFARDLFNKMPERDTV--SWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
++ YA G S +F ++ R + WNS+I+ + +NG A+ + +M+ S
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
PD T + AC L + + ++ + + +SLI Y G ++ +
Sbjct: 136 -PDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSK 194
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGL 325
+F + +D V +N +++G A G IK S M+ D I P+ +T+ +L+ C+ L
Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLL 254
Query: 326 LEEGQKVFESIKVPDVDHYA----CMIDMLGRVGKLEEAMKLIHSM 367
++ G ++ + V VD ++ M + G+ ++A KL M
Sbjct: 255 IDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 249/451 (55%), Gaps = 43/451 (9%)
Query: 14 TMVTGYAK---SGNLKTARIYFDKMPERSVVSWNAMLSGYAQS-GAALETVRLFNDMLSS 69
++V YAK G++ R FD+M + SV+SW A+++GY ++ A E + LF++M++
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 70 GN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
G+ EP+ T+ + +C +L DP + + ++ + K
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK------------------------- 401
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
G+ NS N++IS + + + A+ F + E++ VS+N+ + G +N
Sbjct: 402 -------RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
A KL E I+ + T S+ S ++GS+ G S + + + + N
Sbjct: 455 FEQAFKLLSE-ITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEP 308
+LI MYS+CGS++ A+ +F M R+++S+ ++I+G A HG I ++ ++M E+G++P
Sbjct: 514 ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKP 573
Query: 309 DRITYIGILTACSHAGLLEEGQKVFESI----KV-PDVDHYACMIDMLGRVGKLEEAMKL 363
+ +TY+ IL+ACSH GL+ EG + F S+ K+ P ++HYACM+D+L R G L +A +
Sbjct: 574 NEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEF 633
Query: 364 IHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRW 423
I++MP + ++ + L A R+H ELG+LAA K+ ++P+ + Y+ LSNIYA AG+W
Sbjct: 634 INTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKW 693
Query: 424 KEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+E +R M+++ + K SW+E +H
Sbjct: 694 EESTEMRRKMKERNLVKEGGCSWIEVGDKIH 724
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 179/373 (47%), Gaps = 41/373 (10%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGN-LKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVR 61
G + +V +++ + K N + A FDKM E +VV+W M++ Q G E +R
Sbjct: 196 GHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIR 255
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYF--VKTALLDM 119
F DM+ SG E D+ T +V S+C+ L + L ++L S V+ +L+DM
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLG----KQLHSWAIRSGLVDDVECSLVDM 311
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
+AKC SA + D R +F++M + +SW ++
Sbjct: 312 YAKC--------------------------SADGSVDD---CRKVFDRMEDHSVMSWTAL 342
Query: 180 IAGYAQNGE-SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
I GY +N + AI LF EMI+ +P+ T S F ACG+L +G + +
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR 402
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
+ + NS+I M+ + ME+A F+ ++ ++LVSYNT + G + + + KL+
Sbjct: 403 GLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLL 462
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVF-ESIKVP-DVDHYAC--MIDMLGRV 354
S++ E + T+ +L+ ++ G + +G+++ + +K+ + C +I M +
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 355 GKLEEAMKLIHSM 367
G ++ A ++ + M
Sbjct: 523 GSIDTASRVFNFM 535
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Query: 198 EMISTNDSKP-DELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSR 256
++++ + +P D +T S+ +C LG + L E+ I+ + YNSLI +YS+
Sbjct: 50 DLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSK 109
Query: 257 CGSMEEATLIFQEM---ATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITY 313
G +A +F+ M RD+VS++ +++ ++G ++ IK+ + E G+ P+ Y
Sbjct: 110 SGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCY 169
Query: 314 IGILTACSHAGLLEEGQ 330
++ ACS++ + G+
Sbjct: 170 TAVIRACSNSDFVGVGR 186
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 247/442 (55%), Gaps = 8/442 (1%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN-E 72
T+V Y K G A FD+MP R ++W ++L+ Q+ + +T+ +F+ + SS
Sbjct: 43 TLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLR 102
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
PD+ + ++ +C++LG + ++ ++ VK++L+DM+AKCG L +A+ +
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
FD + V +N++S AM+S YA+ G A +LF +P ++ SW ++I+G+ Q+G+ L A
Sbjct: 163 FDSIRV-KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
+F EM D L + S+ AC +L + G ++ + N+LI
Sbjct: 222 FSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALID 281
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MY++C + A IF M RD+VS+ +LI G+A HG + + L M G++P+ +T
Sbjct: 282 MYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 313 YIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++G++ ACSH G +E+G+++F+S+ P + HY C++D+LGR G L+EA LIH+M
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLF-TVEPHNSSNYVLLSNIYALAGRWKEV 426
P P + +LL+A + + ++G A L + + + S Y+LLSNIYA A W +V
Sbjct: 402 PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKV 461
Query: 427 GNVRNIMRKQGVKKITAWSWVE 448
R + + V+K S VE
Sbjct: 462 SEARRKLGEMEVRKDPGHSSVE 483
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 166/375 (44%), Gaps = 70/375 (18%)
Query: 1 MMGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETV 60
++ E + V +++V YAK G L +A+ FD + ++ +SW AM+SGYA+SG E +
Sbjct: 132 IVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEAL 191
Query: 61 RLFNDM----------LSSG----------------------NEPDETTWVTVISSCSSL 88
LF + L SG + D +++ +C++L
Sbjct: 192 ELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANL 251
Query: 89 GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAM 148
+ + + F S F+ AL+DM+AKC ++ AA++I
Sbjct: 252 AASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDI---------------- 295
Query: 149 ISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPD 208
F++M RD VSW S+I G AQ+G++ A+ L+ +M+S + KP+
Sbjct: 296 ----------------FSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVS-HGVKPN 338
Query: 209 ELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIF 267
E+T V + AC H+G + G S+ +Y I+ S+ Y L+ + R G ++EA +
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 268 QEMA-TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI---GILTACSHA 323
M D ++ L+S G G I++ + D TYI I + S
Sbjct: 399 HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLW 458
Query: 324 GLLEEGQKVFESIKV 338
G + E ++ ++V
Sbjct: 459 GKVSEARRKLGEMEV 473
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 106/218 (48%), Gaps = 8/218 (3%)
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
KA +LG+ + N +++ Y + G S A +F++MP RD ++W S++ Q
Sbjct: 23 KALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQA 82
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSI 244
S + +F + S++ +PD+ ++ AC +LGS+ G + I++EY +
Sbjct: 83 NLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVV 142
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
+SL+ MY++CG + A +F + ++ +S+ ++SG A G E ++L +
Sbjct: 143 --KSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVK 200
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVD 342
+ ++ +++ +G E VF ++ VD
Sbjct: 201 NL----YSWTALISGFVQSGKGLEAFSVFTEMRRERVD 234
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 251 bits (641), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 126/315 (40%), Positives = 203/315 (64%), Gaps = 7/315 (2%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N+++ YA GD++ A +F+KMPE+D V+WNS+I G+A+NG+ A+ L+ EM ++
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM-NSKGI 85
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
KPD T+VS+ SAC +G+L+LG + + + ++ N L+ +Y+RCG +EEA
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 145
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE-DGIEPDRITYIGILTACSHAG 324
+F EM ++ VS+ +LI GLA +G G E I+L M+ +G+ P IT++GIL ACSH G
Sbjct: 146 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 325 LLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSL 379
+++EG + F ++ P ++H+ CM+D+L R G++++A + I SMPM+P+ I+ +L
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 380 LNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVK 439
L A +H +L E A ++ +EP++S +YVLLSN+YA RW +V +R M + GVK
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 440 KITAWSWVEHPSHVH 454
K+ S VE + VH
Sbjct: 326 KVPGHSLVEVGNRVH 340
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 142/273 (52%), Gaps = 34/273 (12%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
YA G++ +A FDKMPE+ +V+WN++++G+A++G E + L+ +M S G +PD T
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
V+++S+C+ +G L + + + KV N LLD++A+CG ++ A+ +FD+
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE--- 149
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
M ++++VSW S+I G A NG AI+LFK
Sbjct: 150 -----------------------------MVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEYQIKLSILGYNSLIFMYSRC 257
M ST P E+T V + AC H G + G + + EY+I+ I + ++ + +R
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 258 GSMEEATLIFQEMATR-DLVSYNTLISGLASHG 289
G +++A + M + ++V + TL+ HG
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
RN+ + ++ YA+ G ++ A+ FD+M +++ VSW +++ G A +G E + LF M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 67 LSS-GNEPDETTWVTVISSCSSLGDPCLAESIVRKLD---KVKFHSNYFVKTALLDMHAK 122
S+ G P E T+V ++ +CS G R++ K++ +F ++D+ A+
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF--GCMVDLLAR 239
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFA 161
G +K A E + + N V ++ A GD A
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 278
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 251 bits (640), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 244/456 (53%), Gaps = 16/456 (3%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPE-RSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
V M+ Y + G++ A F + PE +SWN +++GYAQ+G E +++ M
Sbjct: 194 VARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEE 253
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
+G + DE ++ V++ SSL + + + ++ K +SN FV + ++D++ KCGN+K
Sbjct: 254 NGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKY 313
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
A+ G + N S ++MI Y+ G + A+ LF+ + E++ V W +M GY +
Sbjct: 314 AESAHLLYG-FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQ 372
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
++L + I+ + PD L MVSV AC + G ++ + ++ IL
Sbjct: 373 PDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPG----KEIHGHSLRTGILMDK 428
Query: 249 SLIF----MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
L+ MYS+CG++E A IF RD V YN +I+G A HGH + + M E
Sbjct: 429 KLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGKLEE 359
G +PD IT++ +L+AC H GL+ EG+K F+S+ P+ HY CMID+ G+ +L++
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 360 AMKLIHSM-PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
A++L+ + +E A I G+ LNA +K EL + KL +E N S Y+ ++N YA
Sbjct: 549 AIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYA 608
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+GRW E+ +R+ MR + ++ + SW H
Sbjct: 609 SSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFH 644
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 199/427 (46%), Gaps = 51/427 (11%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFD-KMPERSVVSWNAMLSGYAQS-GAALETVRLF 63
+RNV +W ++ Y K N+K AR F+ ER ++++N +LSG+A++ G E + +F
Sbjct: 51 ERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMF 110
Query: 64 NDMLSSGNEP---DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
+M + D+ T T++ + L + E + L K F ++L+ M+
Sbjct: 111 GEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMY 170
Query: 121 AKCGNLKAAQEIFDQLGV-YRNSVSCNAMISAYARLGDLSFARDLFNKMPE-RDTVSWNS 178
+KCG K IF+ V + +SV+ NAMI+AY R GD+ A +F + PE DT+SWN+
Sbjct: 171 SKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNT 230
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILN 236
+IAGYAQNG A+K+ M N K DE + +V + L SL +G + A + N
Sbjct: 231 LIAGYAQNGYEEEALKMAVSM-EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKN 289
Query: 237 -EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECI 295
Y K G ++ +Y +CG+M+ A +L S +++I G +S G +E
Sbjct: 290 GSYSNKFVSSG---IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAK 346
Query: 296 KLISKMKEDGI--------------------------------EPDRITYIGILTACSHA 323
+L + E + PD + + +L ACS
Sbjct: 347 RLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQ 406
Query: 324 GLLEEGQKVF-ESIK---VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSL 379
+E G+++ S++ + D +DM + G +E A ++ S E +Y ++
Sbjct: 407 AYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAM 465
Query: 380 LNATRIH 386
+ H
Sbjct: 466 IAGCAHH 472
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 161/346 (46%), Gaps = 46/346 (13%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGY---AQSGAALETVRLFN 64
N+ + ++M+ GY+ G + A+ FD + E+++V W AM GY Q + LE R F
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAF- 383
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+ + N PD V+V+ +CS + I + + + TA +DM++KCG
Sbjct: 384 -IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCG 442
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
N++ A+ IFD SF ERDTV +N+MIAG A
Sbjct: 443 NVEYAERIFDS-----------------------SF---------ERDTVMYNAMIAGCA 470
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQIKLS 243
+G + + F++M + KPDE+T +++ SAC H G + G + S++ Y I
Sbjct: 471 HHGHEAKSFQHFEDM-TEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPE 529
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQ--EMATRDLVSYNTLISGLASHGHGIECIKLISK- 300
Y +I +Y + +++A + + + +D V ++ S E +K + +
Sbjct: 530 TGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNA-CSWNKNTELVKEVEEK 588
Query: 301 -MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYA 345
+ +G R YI I A + +G +E Q++ ++ +++ ++
Sbjct: 589 LLVIEGSNGSR--YIQIANAYASSGRWDEMQRIRHQMRGKELEIFS 632
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/450 (32%), Positives = 243/450 (54%), Gaps = 53/450 (11%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVS---WNAMLSGYAQSGAALETVRLFNDMLSS 69
+ ++T ++ L AR FD + + S+++ W AM GY+++G+ + + ++ DML S
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 70 GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
EP + + +C L D + I ++ K K + V LL ++ + G
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESG----- 285
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
+FD AR +F+ M ER+ V+WNS+I+ ++
Sbjct: 286 --LFDD-------------------------ARKVFDGMSERNVVTWNSLISVLSKKVRV 318
Query: 190 LMAIKLFKEMISTNDSKPDEL------TMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
LF++M +E+ T+ ++ AC + +L G + + + + K
Sbjct: 319 HEMFNLFRKM-------QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
+ NSL+ MY +CG +E + +F M T+DL S+N +++ A +G+ E I L M E
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLE 358
G+ PD IT++ +L+ CS GL E G +FE +K P ++HYAC++D+LGR GK++
Sbjct: 432 SGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIK 491
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
EA+K+I +MP +P A I+GSLLN+ R+H V +GE+AA +LF +EPHN NYV++SNIYA
Sbjct: 492 EAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYA 551
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
A W V +R +M+++GVKK SWV+
Sbjct: 552 DAKMWDNVDKIREMMKQRGVKKEAGCSWVQ 581
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 132/272 (48%), Gaps = 9/272 (3%)
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVS---WNSMIAG 182
+K I + + N + +I+ ++ L AR +F+ + + ++ W +M G
Sbjct: 151 IKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIG 210
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
Y++NG A+ ++ +M+ + +P ++ AC L L +G + + + + K+
Sbjct: 211 YSRNGSPRDALIVYVDMLCSF-IEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKV 269
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+ YN L+ +Y G ++A +F M+ R++V++N+LIS L+ E L KM+
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQ----KVFESIKVPDVDHYACMIDMLGRVGKLE 358
E+ I T IL ACS L G+ ++ +S + PDV ++DM G+ G++E
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVE 390
+ ++ M + A + +LN I+ +E
Sbjct: 390 YSRRVFDVMLTKDLAS-WNIMLNCYAINGNIE 420
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 35/283 (12%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
V + ++ Y +SG AR FD M ER+VV+WN+++S ++ E LF M
Sbjct: 272 VVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEE 331
Query: 70 GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
T T++ +CS + + I ++ K K + + +L+DM+ KCG ++ +
Sbjct: 332 MIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYS 391
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
+ +FD + + ++ S N M++ YA G++ +LF M E +G A
Sbjct: 392 RRVFDVM-LTKDLASWNIMLNCYAINGNIEEVINLFEWMIE----------SGVA----- 435
Query: 190 LMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQIKLSILGYN 248
PD +T V++ S C G G+ + E+++ ++ Y
Sbjct: 436 -----------------PDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYA 478
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVS-YNTLISGLASHGH 290
L+ + R G ++EA + + M + S + +L++ HG+
Sbjct: 479 CLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGN 521
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 242/440 (55%), Gaps = 40/440 (9%)
Query: 22 SGNLKTARIYFDKM-PERSVVSWNAMLSGYAQSGAALETVRLFNDML-SSGNEPDETTWV 79
+G+L A++ FD + S WN ++ G++ S + L ++ +N ML SS + PD T+
Sbjct: 52 TGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFN 111
Query: 80 TVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVY 139
+ SC + +SI + L+ H + +++ LD
Sbjct: 112 FALKSCERI------KSIPKCLE---IHGS-VIRSGFLD--------------------- 140
Query: 140 RNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEM 199
+++ +++ Y+ G + A +F++MP RD VSWN MI ++ G A+ ++K M
Sbjct: 141 -DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRM 199
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
D T+V++ S+C H+ +L++G+ I + + + + N+LI MY++CGS
Sbjct: 200 -GNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGS 258
Query: 260 MEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTA 319
+E A +F M RD++++N++I G HGHG+E I KM G+ P+ IT++G+L
Sbjct: 259 LENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLG 318
Query: 320 CSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAG 374
CSH GL++EG + FE + P+V HY CM+D+ GR G+LE ++++I++
Sbjct: 319 CSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPV 378
Query: 375 IYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMR 434
++ +LL + +IH+ +ELGE+A KL +E N+ +YVL+++IY+ A + ++R ++R
Sbjct: 379 LWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIR 438
Query: 435 KQGVKKITAWSWVEHPSHVH 454
++ + WSW+E VH
Sbjct: 439 SHDLQTVPGWSWIEIGDQVH 458
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 140/283 (49%), Gaps = 35/283 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+ + T++V Y+ +G+++ A FD+MP R +VSWN M+ ++ G + + ++ M
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ G D T V ++SSC+ + + + R ++ S FV AL+DM+AKCG+L+
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A +GV FN M +RD ++WNSMI GY +G
Sbjct: 261 NA------IGV--------------------------FNGMRKRDVLTWNSMIIGYGVHG 288
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQIKLSILG 246
+ AI F++M+++ +P+ +T + + C H G + G+ I+ +++ + ++
Sbjct: 289 HGVEAISFFRKMVASG-VRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKH 347
Query: 247 YNSLIFMYSRCGSMEEA-TLIFQEMATRDLVSYNTLISGLASH 288
Y ++ +Y R G +E + +I+ D V + TL+ H
Sbjct: 348 YGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIH 390
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/457 (32%), Positives = 250/457 (54%), Gaps = 40/457 (8%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+++ YA+ G+ A F M + ++SWNA+L +A S + + L + +L+ D
Sbjct: 372 LISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLD 431
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKT-------------ALLDMHA 121
T ++++ C + V+ + KVK Y VK ALLD +A
Sbjct: 432 SVTILSLLKFCIN----------VQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYA 481
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
KCGN++ A +IF L R VS N+++S Y G A+ LF +M D +W+ M+
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVR 541
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSL-----GIWAVSILN 236
YA++ AI +F+E I +P+ +T++++ C L SL L G L
Sbjct: 542 IYAESCCPNEAIGVFRE-IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG 600
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIK 296
+ ++K +L+ +Y++CGS++ A +FQ A RDLV + +++G A HG G E +
Sbjct: 601 DIRLK------GTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALM 654
Query: 297 LISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDML 351
+ S M E I+PD + +LTAC HAGL+++G ++++SI+ P ++ YAC +D++
Sbjct: 655 IYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLI 714
Query: 352 GRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYV 411
R G+L++A + MP+EP+A I+G+LL A + +++LG A L E ++ N+V
Sbjct: 715 ARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHV 774
Query: 412 LLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
L+SN+YA +W+ V +RN+M+K+ +KK SW+E
Sbjct: 775 LISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLE 811
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 158/318 (49%), Gaps = 32/318 (10%)
Query: 6 QRNVVTWTTMVTGYAKSGNL-KTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
+++ + +V+ YAK G + A FD + ++ VVSWNA+++G++++ + R F
Sbjct: 154 EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFC 213
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
ML EP+ T V+ C+S+ D +A R++ HS Y V+ + L H
Sbjct: 214 LMLKEPTEPNYATIANVLPVCASM-DKNIACRSGRQI-----HS-YVVQRSWLQTHV--- 263
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
CN+++S Y R+G + A LF +M +D VSWN +IAGYA
Sbjct: 264 ------------------FVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKL 242
N E A +LF ++ D PD +T++S+ C L L+ G I + + + Y ++
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+ +G N+LI Y+R G A F M+T+D++S+N ++ A + + L+ +
Sbjct: 366 TSVG-NALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 303 EDGIEPDRITYIGILTAC 320
+ I D +T + +L C
Sbjct: 425 NEAITLDSVTILSLLKFC 442
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 153/326 (46%), Gaps = 43/326 (13%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM-LSSGNEPDETT 77
YAK + + F +M V WN +L+G + S ET+R F M + +P T
Sbjct: 66 YAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS-CGRETMRFFKAMHFADEPKPSSVT 124
Query: 78 WVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG 137
+ V+ C LGD +S+ HS Y +K G
Sbjct: 125 FAIVLPLCVRLGDSYNGKSM---------HS-YIIKA----------------------G 152
Query: 138 VYRNSVSCNAMISAYARLGDL-SFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
+ ++++ NA++S YA+ G + A F+ + ++D VSWN++IAG+++N A + F
Sbjct: 153 LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSF 212
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS-----ILGYNSLI 251
M+ ++P+ T+ +V C + ++ + ++ Y ++ S + NSL+
Sbjct: 213 CLMLK-EPTEPNYATIANVLPVCASMDK-NIACRSGRQIHSYVVQRSWLQTHVFVCNSLV 270
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG-IEPDR 310
Y R G +EEA +F M ++DLVS+N +I+G AS+ + +L + G + PD
Sbjct: 271 SFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDS 330
Query: 311 ITYIGILTACSHAGLLEEGQKVFESI 336
+T I IL C+ L G+++ I
Sbjct: 331 VTIISILPVCAQLTDLASGKEIHSYI 356
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 127/271 (46%), Gaps = 45/271 (16%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+R +V++ ++++GY SG+ A++ F +M + +W+ M+ YA+S E + +F +
Sbjct: 499 RRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE 558
Query: 66 MLSSGNEPDETTWVTVISSCSSLGD-----PCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
+ + G P+ T + ++ C+ L C I L ++ +K LLD++
Sbjct: 559 IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIR------LKGTLLDVY 612
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
AKCG+LK A +F S AR RD V + +M+
Sbjct: 613 AKCGSLKHAYSVFQ------------------------SDAR--------RDLVMFTAMV 640
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQ 239
AGYA +G A+ ++ M +N KPD + + ++ +AC H G + G+ SI +
Sbjct: 641 AGYAVHGRGKEALMIYSHMTESN-IKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHG 699
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
+K ++ Y + + +R G +++A +M
Sbjct: 700 MKPTMEQYACAVDLIARGGRLDDAYSFVTQM 730
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 44/314 (14%)
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
N L SG D ++ V+ +C+S+ D ++ + K+ + V ++L+M+AKC
Sbjct: 10 NFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKC 69
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
+ Q++F Q M D V WN ++ G
Sbjct: 70 RRMDDCQKMFRQ--------------------------------MDSLDPVVWNIVLTGL 97
Query: 184 AQN-GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
+ + G M + FK M ++ KP +T V C LG G S + + ++
Sbjct: 98 SVSCGRETM--RFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEK 155
Query: 243 SILGYNSLIFMYSRCGSM-EEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
L N+L+ MY++ G + +A F +A +D+VS+N +I+G + + + + M
Sbjct: 156 DTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLM 215
Query: 302 KEDGIEPDRITYIGILTACSHAG---LLEEGQKVFESIKVP---DVDHYAC--MIDMLGR 353
++ EP+ T +L C+ G+++ + + C ++ R
Sbjct: 216 LKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLR 275
Query: 354 VGKLEEAMKLIHSM 367
VG++EEA L M
Sbjct: 276 VGRIEEAASLFTRM 289
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
T++ YAK G+LK A F R +V + AM++GYA G E + +++ M S +P
Sbjct: 607 TLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKP 666
Query: 74 DETTWVTVISSCSSLG---DPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
D T++++C G D +R + +K + +D+ A+ G L A
Sbjct: 667 DHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQY--ACAVDLIARGGRLDDAY 724
Query: 131 EIFDQLGVYRNS 142
Q+ V N+
Sbjct: 725 SFVTQMPVEPNA 736
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 249/457 (54%), Gaps = 56/457 (12%)
Query: 15 MVTGYAKSGNLKT--------------ARIYFDKMPERSVVSWNAMLSGYAQSGAALETV 60
+VTGY +S +L T + F +P +N+++ ++ L V
Sbjct: 33 IVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCV 92
Query: 61 RLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
+ MLSS P T+ +VI SC+ L + + + H + V LD +
Sbjct: 93 AYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV---------HCHAVVSGFGLDTY 143
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
+ A+++ Y++ GD+ AR +F++MPE+ V+WNS++
Sbjct: 144 VQA-----------------------ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLV 180
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
+G+ QNG + AI++F +M + +PD T VS+ SAC G++SLG W + +
Sbjct: 181 SGFEQNGLADEAIQVFYQMRESG-FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL 239
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
L++ +LI +YSRCG + +A +F +M ++ ++ +IS +HG+G + ++L +K
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK 299
Query: 301 MKED-GIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRV 354
M++D G P+ +T++ +L+AC+HAGL+EEG+ V++ + +P V+H+ CM+DMLGR
Sbjct: 300 MEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRA 359
Query: 355 GKLEEAMKLIHSMPMEPHA---GIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYV 411
G L+EA K IH + A ++ ++L A ++H+ +LG A +L +EP N ++V
Sbjct: 360 GFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHV 419
Query: 412 LLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
+LSNIYAL+G+ EV ++R+ M + ++K +S +E
Sbjct: 420 MLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIE 456
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 116/267 (43%), Gaps = 64/267 (23%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P++++V W ++V SG+ Q+G A E +++F
Sbjct: 169 PEKSIVAWNSLV-------------------------------SGFEQNGLADEAIQVFY 197
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M SG EPD T+V+++S+C+ G L + + + N + TAL++++++CG
Sbjct: 198 QMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCG 257
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
++ A+E+FD++ N + AMISAY GY
Sbjct: 258 DVGKAREVFDKMK-ETNVAAWTAMISAYG--------------------------THGYG 290
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLS 243
Q A++LF +M P+ +T V+V SAC H G + G + + Y++
Sbjct: 291 QQ-----AVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPG 345
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEM 270
+ + ++ M R G ++EA ++
Sbjct: 346 VEHHVCMVDMLGRAGFLDEAYKFIHQL 372
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 239/447 (53%), Gaps = 49/447 (10%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T+++ Y K G++ AR F++ +V W AM+ GY +G+ E + LF M +
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
P+ T +V+S C + + L S+ +
Sbjct: 341 PNCVTIASVLSGCGLIENLELGRSV--------------------------------HGL 368
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
++G++ +V+ NA++ YA+ A+ +F E+D V+WNS+I+G++QNG A
Sbjct: 369 SIKVGIWDTNVA-NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEA 427
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS--- 249
+ LF M ++ P+ +T+ S+FSAC LGSL++G S L+ Y +KL L +S
Sbjct: 428 LFLFHRM-NSESVTPNGVTVASLFSACASLGSLAVG----SSLHAYSVKLGFLASSSVHV 482
Query: 250 ---LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
L+ Y++CG + A LIF + ++ ++++ +I G G I ++L +M +
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ 542
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAM 361
+P+ T+ IL+AC H G++ EG+K F S+ P HY CM+DML R G+LE+A+
Sbjct: 543 KPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQAL 602
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAG 421
+I MP++P +G+ L+ +H + +LGE+ K+ + P ++S YVL+SN+YA G
Sbjct: 603 DIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDG 662
Query: 422 RWKEVGNVRNIMRKQGVKKITAWSWVE 448
RW + VRN+M+++G+ KI S +E
Sbjct: 663 RWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 162/331 (48%), Gaps = 40/331 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P + V T ++ YAK G +K+A F+ + R+VV W +M++GY ++ E + LFN
Sbjct: 172 PSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFN 231
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M + +E T+ T+I +C+ L + L K + + T+LLDM+ KCG
Sbjct: 232 RMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCG 291
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
D+S AR +FN+ D V W +MI GY
Sbjct: 292 --------------------------------DISNARRVFNEHSHVDLVMWTAMIVGYT 319
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
NG A+ LF++M + KP+ +T+ SV S CG + +L LG ++ IK+ I
Sbjct: 320 HNGSVNEALSLFQKMKGV-EIKPNCVTIASVLSGCGLIENLELG----RSVHGLSIKVGI 374
Query: 245 LGY---NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
N+L+ MY++C +A +F+ + +D+V++N++ISG + +G E + L +M
Sbjct: 375 WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
+ + P+ +T + +AC+ G L G +
Sbjct: 435 NSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 152/327 (46%), Gaps = 35/327 (10%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T +V+ Y G K AR+ FD++PE W ML Y + ++E V+L++ ++ G
Sbjct: 80 TKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFR 139
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
D+ + + +C+ L D + I +L KV N V T LLDM+AKCG +K+A ++
Sbjct: 140 YDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDN-VVLTGLLDMYAKCGEIKSAHKV 198
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
F+ + + RN V +MI+ Y + LFN+M E + +
Sbjct: 199 FNDITL-RNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG----------------- 240
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
+E T ++ AC L +L G W L + I+LS SL+
Sbjct: 241 ---------------NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MY +CG + A +F E + DLV + +I G +G E + L KMK I+P+ +T
Sbjct: 286 MYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 313 YIGILTACSHAGLLEEGQKVFE-SIKV 338
+L+ C LE G+ V SIKV
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKV 372
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 121/256 (47%), Gaps = 17/256 (6%)
Query: 121 AKCGN---LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWN 177
+KC N L+ + + G+ + ++S Y G AR +F+++PE D W
Sbjct: 52 SKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWK 111
Query: 178 SMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG----IWAVS 233
M+ Y N ES+ +KL+ +++ + + D++ AC L L G V
Sbjct: 112 VMLRCYCLNKESVEVVKLY-DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVK 170
Query: 234 ILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIE 293
+ + + L+ L+ MY++CG ++ A +F ++ R++V + ++I+G + E
Sbjct: 171 VPSFDNVVLT-----GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 294 CIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMI----D 349
+ L ++M+E+ + + TY ++ AC+ L +G+ + ++ +C++ D
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLD 285
Query: 350 MLGRVGKLEEAMKLIH 365
M + G + A ++ +
Sbjct: 286 MYVKCGDISNARRVFN 301
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 248 bits (632), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/445 (31%), Positives = 243/445 (54%), Gaps = 47/445 (10%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
++V YA+ G +++A+ FD++P R+ V W ++ GY + E RLF M +G
Sbjct: 149 SLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLAL 208
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNY-----FVKTALLDMHAKCGNLKA 128
D T + ++ +C ++ A + + + V ++ +++ +++DM+ KC
Sbjct: 209 DALTLICLVKACGNV----FAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC----- 259
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
RL L AR LF +R+ V W ++I+G+A+
Sbjct: 260 -------------------------RL--LDNARKLFETSVDRNVVMWTTLISGFAKCER 292
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
++ A LF++M+ + P++ T+ ++ +C LGSL G + I++ + +
Sbjct: 293 AVEAFDLFRQMLRES-ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFT 351
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEP 308
S I MY+RCG+++ A +F M R+++S++++I+ +G E + KMK + P
Sbjct: 352 SFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVP 411
Query: 309 DRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKL 363
+ +T++ +L+ACSH+G ++EG K FES+ VP+ +HYACM+D+LGR G++ EA
Sbjct: 412 NSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSF 471
Query: 364 IHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRW 423
I +MP++P A +G+LL+A RIHK+V+L A KL ++EP SS YVLLSNIYA AG W
Sbjct: 472 IDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMW 531
Query: 424 KEVGNVRNIMRKQGVKKITAWSWVE 448
+ V VR M +G +K S E
Sbjct: 532 EMVNCVRRKMGIKGYRKHVGQSATE 556
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 194/430 (45%), Gaps = 50/430 (11%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMP--ERSVVSWNAMLSGYAQSGAAL--ETVRLFN 64
VV +++ Y +S L A F+++P +R+ SWN +LSGY++S + + L+N
Sbjct: 39 VVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYN 98
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M + D V I +C LG ++ +L
Sbjct: 99 RMRRHCDGVDSFNLVFAIKACVGLG---------------------LLENGILIHGLAMK 137
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
N G+ ++ +++ YA+LG + A+ +F+++P R++V W ++ GY
Sbjct: 138 N-----------GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHL--GSLSLGIWAVSILNEYQIKL 242
+ + +LF M T + D LT++ + ACG++ G + + VSI + I
Sbjct: 187 KYSKDPEVFRLFCLMRDTGLA-LDALTLICLVKACGNVFAGKVGKCVHGVSIRRSF-IDQ 244
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
S S+I MY +C ++ A +F+ R++V + TLISG A +E L +M
Sbjct: 245 SDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQML 304
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVF-----ESIKVPDVDHYACMIDMLGRVGKL 357
+ I P++ T IL +CS G L G+ V I++ D ++ IDM R G +
Sbjct: 305 RESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEM-DAVNFTSFIDMYARCGNI 363
Query: 358 EEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVE--LGELAAAKLFTVEPHNSSNYVLLSN 415
+ A + MP E + + S++NA I+ E L K V P NS +V L +
Sbjct: 364 QMARTVFDMMP-ERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVP-NSVTFVSLLS 421
Query: 416 IYALAGRWKE 425
+ +G KE
Sbjct: 422 ACSHSGNVKE 431
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ + V +T+ + YA+ GN++ AR FD MPER+V+SW++M++ + +G E + F+
Sbjct: 344 EMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHK 403
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLA----ESIVRKLDKVKFHSNYFVKTALLDMHA 121
M S P+ T+V+++S+CS G+ ES+ R V +Y ++D+
Sbjct: 404 MKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHY---ACMVDLLG 460
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM----PERDTV 174
+ G + A+ D + V + + A++SA ++ A ++ K+ PE+ +V
Sbjct: 461 RAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV 517
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 249/438 (56%), Gaps = 14/438 (3%)
Query: 21 KSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVT 80
K G L AR FD++P+ ++ ++N M+SGY + G E + L M SG + D T
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 81 VISSCSSLGDP-CLAESIVR----KLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQ 135
V+ + +S G L S+ R ++ K + + TAL+D + K G L++A+ +F+
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 136 LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL-MAIK 194
+ N V C +MIS Y G + A ++FN +D V +N+M+ G++++GE+ ++
Sbjct: 201 MKD-ENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVD 259
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
++ M P+ T SV AC L S +G + + + + I +SL+ MY
Sbjct: 260 MYISMQRAG-FHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMY 318
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
++CG + +A +F +M +++ S+ ++I G +G+ E ++L ++MKE IEP+ +T++
Sbjct: 319 AKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFL 378
Query: 315 GILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
G L+ACSH+GL+++G ++FES++ P ++HYAC++D++GR G L +A + +MP
Sbjct: 379 GALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE 438
Query: 370 EPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSN-YVLLSNIYALAGRWKEVGN 428
P + I+ +LL++ +H VEL +AA++LF + Y+ LSN+YA +W V
Sbjct: 439 RPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSK 498
Query: 429 VRNIMRKQGVKKITAWSW 446
+R +M+++ + K SW
Sbjct: 499 IREVMKRRRISKTIGRSW 516
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 138/286 (48%), Gaps = 36/286 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSG-AALETVRLFNDM 66
NVV T+M++GY G ++ A F+ + +V +NAM+ G+++SG A +V ++ M
Sbjct: 205 NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISM 264
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
+G P+ +T+ +VI +CS L + + + ++ K +++ + ++LLDM+AKCG +
Sbjct: 265 QRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
A+ +FDQ+ +N S +MI Y + G+ A +LF +M E
Sbjct: 325 NDARRVFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKE---------------- 367
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKLSIL 245
F+ +P+ +T + SAC H G + G S+ +Y +K +
Sbjct: 368 ---------FR-------IEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKME 411
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGH 290
Y ++ + R G + +A + M R D + L+S HG+
Sbjct: 412 HYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGN 457
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 36/190 (18%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
++++ YAK G + AR FD+M E++V SW +M+ GY ++G E + LF M E
Sbjct: 312 SSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
P+ T++ +S+CS G I + + +Y +K + H C I
Sbjct: 372 PNYVTFLGALSACSHSGLVDKGYEIFESMQR-----DYSMKPKM--EHYAC--------I 416
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER-DTVSWNSMIAGYAQNGE--- 188
D +G R GDL+ A + MPER D+ W ++++ +G
Sbjct: 417 VDLMG----------------RAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVEL 460
Query: 189 -SLMAIKLFK 197
S+ A +LFK
Sbjct: 461 ASIAASELFK 470
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 142/340 (41%), Gaps = 54/340 (15%)
Query: 91 PCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSC-NAMI 149
P + I + K F + + LL +H KCG L A+++FD+L + ++S N MI
Sbjct: 50 PKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELP--KPTLSAYNYMI 107
Query: 150 SAYARLGDLSFARDLFNKMP----ERDTVSWNSMIAGYAQNGESLM----AIKLFKEMIS 201
S Y + G + L +M + D + + ++ G +++ +L I
Sbjct: 108 SGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII 167
Query: 202 TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSME 261
D + D++ + ++ G L + + E +++ S+I Y G +E
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLE----SARTVFETMKDENVVCCTSMISGYMNQGFVE 223
Query: 262 EATLIFQEMATRDLVSYNTLISGLASHGHGIE-CIKLISKMKEDGIEPDRITYIGILTAC 320
+A IF +D+V YN ++ G + G + + + M+ G P+ T+ ++ AC
Sbjct: 224 DAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGAC 283
Query: 321 S-----------HAGLLEEG------------------------QKVFESIKVPDVDHYA 345
S HA +++ G ++VF+ ++ +V +
Sbjct: 284 SVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWT 343
Query: 346 CMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNA 382
MID G+ G EEA++L M +EP+ + L+A
Sbjct: 344 SMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSA 383
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 155/482 (32%), Positives = 246/482 (51%), Gaps = 43/482 (8%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P R+VV+W +M++G + G++ TA FD+MPERSVVSW AM++G +SG + RLF
Sbjct: 93 PVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFY 152
Query: 65 DM---------------LSSGNEPDE------------TTWVTVISSCSSLGDPCLAESI 97
M L G D +W T+I A +
Sbjct: 153 QMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDL 212
Query: 98 VRKLDKVKFHSNYFVKTALLDMHAKCGNLKA------AQEIFDQLGVYRNSVSCNAMISA 151
+ + + S T ++ C N A + +LG ++I+
Sbjct: 213 FKNMLRCCIKSTSRPFTCVI---TACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITF 269
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
YA + +R +F++ W ++++GY+ N + A+ +F M+ N P++ T
Sbjct: 270 YANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLR-NSILPNQST 328
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
S ++C LG+L G + + ++ NSL+ MYS G++ +A +F ++
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK 331
+ +VS+N++I G A HG G + +M EPD IT+ G+L+ACSH G LE+G+K
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRK 448
Query: 332 VF----ESIKVPD--VDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRI 385
+F I D + HY CM+D+LGR GKL+EA +LI M ++P+ ++ +LL+A R+
Sbjct: 449 LFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRM 508
Query: 386 HKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWS 445
H V+ GE AAA +F ++ +S+ YVLLSNIYA AGRW V +R M+K G+ K S
Sbjct: 509 HSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSS 568
Query: 446 WV 447
WV
Sbjct: 569 WV 570
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 156/335 (46%), Gaps = 55/335 (16%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P +V +T M+TGY +S L A FD+MP R VVSWN+M+SG + G V+LF+
Sbjct: 62 PSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFD 121
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+M E +W +++ C F S G
Sbjct: 122 EM----PERSVVSWTAMVNGC--------------------FRS---------------G 142
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ A+ +F Q+ V +++ + N+M+ Y + G + A LF +MP ++ +SW +MI G
Sbjct: 143 KVDQAERLFYQMPV-KDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 185 QNGESLMAIKLFKEMIST---NDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
QN S A+ LFK M+ + S+P V +AC + + +GI ++ IK
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRP----FTCVITACANAPAFHMGIQVHGLI----IK 253
Query: 242 LSILGYN----SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKL 297
L L SLI Y+ C + ++ +F E + + L+SG + + + + +
Sbjct: 254 LGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSI 313
Query: 298 ISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
S M + I P++ T+ L +CS G L+ G+++
Sbjct: 314 FSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 66/122 (54%), Gaps = 4/122 (3%)
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
Y +I Y+R + +A +F EM RD+VS+N++ISG G +KL +M E +
Sbjct: 69 YTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV 128
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHS 366
+++ ++ C +G +++ +++F + V D + M+ + GK+++A+KL
Sbjct: 129 ----VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 367 MP 368
MP
Sbjct: 185 MP 186
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 49/226 (21%)
Query: 140 RNSVSCNAMISAYARLGDLSFARDLFNK-------------------------------M 168
R + CN ++S R+ + AR++FN+ M
Sbjct: 38 REVLICNHLLSR--RIDE---AREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEM 92
Query: 169 PERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDE--LTMVSVFSACGHLGSLS 226
P RD VSWNSMI+G + G+ A+KLF EM P+ ++ ++ + C G +
Sbjct: 93 PVRDVVSWNSMISGCVECGDMNTAVKLFDEM-------PERSVVSWTAMVNGCFRSGKVD 145
Query: 227 LGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLA 286
A + + +K +NS++ Y + G +++A +F++M ++++S+ T+I GL
Sbjct: 146 Q---AERLFYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
+ E + L M I+ + ++TAC++A G +V
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 238/431 (55%), Gaps = 43/431 (9%)
Query: 23 GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVI 82
G++ +RI D+ P WN ++ Y + + L+ ++++ M+ S PD + VI
Sbjct: 68 GDIFRSRI-LDQYP--IAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVI 124
Query: 83 SSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNS 142
+ + D L + + HS + +LG +
Sbjct: 125 KAAVQIHDFTLGKEL---------HS-----------------------VAVRLGFVGDE 152
Query: 143 VSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIST 202
+ I+ Y + G+ AR +F++ PER SWN++I G G + A+++F +M
Sbjct: 153 FCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDM-KR 211
Query: 203 NDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYSRCGSM 260
+ +PD+ TMVSV ++CG LG LSL + + + + K I+ NSLI MY +CG M
Sbjct: 212 SGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRM 271
Query: 261 EEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTAC 320
+ A+ IF+EM R++VS++++I G A++G+ +E ++ +M+E G+ P++IT++G+L+AC
Sbjct: 272 DLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSAC 331
Query: 321 SHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGI 375
H GL+EEG+ F +K P + HY C++D+L R G+L+EA K++ MPM+P+ +
Sbjct: 332 VHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMV 391
Query: 376 YGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRK 435
+G L+ VE+ E A + +EP N YV+L+N+YAL G WK+V VR +M+
Sbjct: 392 WGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKT 451
Query: 436 QGVKKITAWSW 446
+ V KI A+S+
Sbjct: 452 KKVAKIPAYSY 462
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 144/279 (51%), Gaps = 37/279 (13%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+T Y K+G + AR FD+ PER + SWNA++ G +G A E V +F DM SG EPD
Sbjct: 158 FITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPD 217
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFH--SNYFVKTALLDMHAKCGNLKAAQEI 132
+ T V+V +SC LGD LA + + + + K S+ + +L+DM+ KCG + A I
Sbjct: 218 DFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHI 277
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
F+++ RN VS ++MI Y A NG +L A
Sbjct: 278 FEEMR-QRNVVSWSSMIVGY-------------------------------AANGNTLEA 305
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQIKLSILGYNSLI 251
++ F++M +P+++T V V SAC H G + G +++ +E++++ + Y ++
Sbjct: 306 LECFRQMREFG-VRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIV 364
Query: 252 FMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHG 289
+ SR G ++EA + +EM + +++ + L+ G G
Sbjct: 365 DLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFG 403
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 91/180 (50%), Gaps = 13/180 (7%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
E + +++ +++ Y K G + A F++M +R+VVSW++M+ GYA +G LE + F
Sbjct: 250 EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECF 309
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTAL------L 117
M G P++ T+V V+S+C G L E +K S + ++ L +
Sbjct: 310 RQMREFGVRPNKITFVGVLSACVHGG---LVEEGKTYFAMMK--SEFELEPGLSHYGCIV 364
Query: 118 DMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWN 177
D+ ++ G LK A+++ +++ + N + ++ + GD+ A + M E + WN
Sbjct: 365 DLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELE--PWN 422
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 241/445 (54%), Gaps = 38/445 (8%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++ +++ T Y+K G+L+ + F +P + W +M+SG+ + G E + LF++ML
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
G PDE+T V++ CSS P L ++H L+
Sbjct: 544 DDGTSPDESTLAAVLTVCSS--HPSLPRG--------------------KEIHGY--TLR 579
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A + LG +A+++ Y++ G L AR +++++PE D VS +S+I+GY+Q+G
Sbjct: 580 AGIDKGMDLG--------SALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHG 631
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
LF++M+ + + D + S+ A SLG + + + +
Sbjct: 632 LIQDGFLLFRDMVMSGFTM-DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG 690
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
+SL+ MYS+ GS+++ F ++ DL+++ LI+ A HG E +++ + MKE G +
Sbjct: 691 SSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFK 750
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMK 362
PD++T++G+L+ACSH GL+EE S+ P+ HY CM+D LGR G+L EA
Sbjct: 751 PDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAES 810
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
I++M ++P A ++G+LL A +IH +VELG++AA K +EP ++ Y+ LSNI A G
Sbjct: 811 FINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGE 870
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWV 447
W EV R +M+ GV+K WS V
Sbjct: 871 WDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 178/370 (48%), Gaps = 40/370 (10%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+V T +V YAK G++ A F ++P SVVSW MLSGY +S A + +F +M
Sbjct: 283 EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
SG E + T +VIS+C C A + + K F+ + V AL+ M++K G++
Sbjct: 343 RHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDI 402
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
++++F+ L + + ++ V N MI ++Q+
Sbjct: 403 DLSEQVFEDL-----------------------------DDIQRQNIV--NVMITSFSQS 431
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
+ AI+LF M+ + DE ++ S+ S L L+LG + + L +
Sbjct: 432 KKPGKAIRLFTRMLQEG-LRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
+SL +YS+CGS+EE+ +FQ + +D + ++ISG +G+ E I L S+M +DG
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH----YACMIDMLGRVGKLEEAMK 362
PD T +LT CS L G+++ +D + +++M + G L+ A +
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQ 607
Query: 363 LIHSMP-MEP 371
+ +P ++P
Sbjct: 608 VYDRLPELDP 617
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 169/367 (46%), Gaps = 44/367 (11%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V ++++ Y+ SG++ A FD +P+ VVS N M+SGY Q E++R F+ M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
G E +E ++ +VIS+CS+L P +E + K+ + V++AL+D+ +K NL+
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK--NLR 200
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
D V+R+S+S N WN++IAG +N
Sbjct: 201 FE----DAYKVFRDSLSAN--------------------------VYCWNTIIAGALRNQ 230
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL---SI 244
LF EM KPD T SV +AC L L G ++ IK +
Sbjct: 231 NYGAVFDLFHEMC-VGFQKPDSYTYSSVLAACASLEKLRFG----KVVQARVIKCGAEDV 285
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
+++ +Y++CG M EA +F + +VS+ ++SG +++ +M+
Sbjct: 286 FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHS 345
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQK----VFESIKVPDVDHYACMIDMLGRVGKLEEA 360
G+E + T +++AC ++ E + VF+S D A +I M + G ++ +
Sbjct: 346 GVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLS 405
Query: 361 MKLIHSM 367
++ +
Sbjct: 406 EQVFEDL 412
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 176/371 (47%), Gaps = 46/371 (12%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
V + ++ ++K+ + A F +V WN +++G ++ LF++M
Sbjct: 186 VVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 70 GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
+PD T+ +V+++C+SL + + ++ K + FV TA++D++AKCG++ A
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEA 304
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
E+ F+++P VSW M++GY ++ ++
Sbjct: 305 MEV--------------------------------FSRIPNPSVVSWTVMLSGYTKSNDA 332
Query: 190 LMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSL--SLGIWAVSILNEYQIKLSILGY 247
A+++FKEM + + + T+ SV SACG + + + A + + + S+
Sbjct: 333 FSALEIFKEMRHSG-VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAA- 390
Query: 248 NSLIFMYSRCGSMEEATLIFQEM---ATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
+LI MYS+ G ++ + +F+++ +++V N +I+ + + I+L ++M ++
Sbjct: 391 -ALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE 447
Query: 305 GIEPDRITYIGILTA--CSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMK 362
G+ D + +L+ C + G G + +S V D+ + + + + G LEE+ K
Sbjct: 448 GLRTDEFSVCSLLSVLDCLNLGKQVHGYTL-KSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 363 LIHSMPMEPHA 373
L +P + +A
Sbjct: 507 LFQGIPFKDNA 517
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 229 IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASH 288
I +L Y + + SL+ YS GSM +A +F + D+VS N +ISG H
Sbjct: 69 ILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQH 128
Query: 289 GHGIECIKLISKMKEDGIEPDRITYIGILTACS--HAGLLEE---------GQKVFESIK 337
E ++ SKM G E + I+Y +++ACS A L E G +E ++
Sbjct: 129 RLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 338 VPDVDHYACMIDMLGRVGKLEEAMKLIH 365
+ +ID+ + + E+A K+
Sbjct: 189 -------SALIDVFSKNLRFEDAYKVFR 209
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 246 bits (627), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 147/459 (32%), Positives = 253/459 (55%), Gaps = 48/459 (10%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
+V +++ Y++ G++ + F M ER VVSWN M+S + Q+G E + L +M
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAES----IVRKLDKVKFHSNYFVKTALLDMHAKCG 124
G + D T ++S+ S+L + + + ++R+ ++F + + L+DM++K G
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQ--GIQFEG---MNSYLIDMYSKSG 467
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
++ +Q++F+ S YA ERD +WNSMI+GY
Sbjct: 468 LIRISQKLFEG--------------SGYA----------------ERDQATWNSMISGYT 497
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
QNG + +F++M+ N +P+ +T+ S+ AC +GS+ LG + ++
Sbjct: 498 QNGHTEKTFLVFRKMLEQN-IRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNV 556
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
++L+ MYS+ G+++ A +F + R+ V+Y T+I G HG G I L M+E
Sbjct: 557 FVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQES 616
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEE 359
GI+PD IT++ +L+ACS++GL++EG K+FE ++ P +HY C+ DMLGRVG++ E
Sbjct: 617 GIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNE 676
Query: 360 AMKLIHSMPMEPH-AGIYGSLLNATRIHKQVELGELAAAKLFTVEP-HNSSNY-VLLSNI 416
A + + + E + A ++GSLL + ++H ++EL E + +L + N S Y VLLSN+
Sbjct: 677 AYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNM 736
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVHC 455
YA +WK V VR MR++G+KK S +E +V+C
Sbjct: 737 YAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNC 775
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 167/342 (48%), Gaps = 37/342 (10%)
Query: 29 RIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSL 88
R FD M ++VV+WN ++S Y ++G E R F M+ +P ++V V
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFP----- 222
Query: 89 GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAM 148
A SI R + K +N F L K E L V ++
Sbjct: 223 -----AVSISRSIKK----ANVFYGLML----------KLGDEYVKDLFV------VSSA 257
Query: 149 ISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPD 208
IS YA LGD+ +R +F+ ER+ WN+MI Y QN + +I+LF E I + + D
Sbjct: 258 ISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSD 317
Query: 209 ELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQ 268
E+T + SA L + LG +++ +L I+ NSL+ MYSRCGS+ ++ +F
Sbjct: 318 EVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFL 377
Query: 269 EMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEE 328
M RD+VS+NT+IS +G E + L+ +M++ G + D IT +L+A S+ E
Sbjct: 378 SMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEI 437
Query: 329 GQK-----VFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIH 365
G++ + + I+ ++ Y +IDM + G + + KL
Sbjct: 438 GKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFE 477
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 176/362 (48%), Gaps = 43/362 (11%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+++ ++ ++ YA+ G+++++R FD ER++ WN M+ Y Q+ +E++ LF +
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA 308
Query: 67 LSSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
+ S DE T++ S+ S+L L +FH FV
Sbjct: 309 IGSKEIVSDEVTYLLAASAVSALQQVELGR---------QFHG--FVSKN---------- 347
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
F +L + V N+++ Y+R G + + +F M ERD VSWN+MI+ + Q
Sbjct: 348 -------FRELPI----VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQ 396
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
NG + L EM K D +T+ ++ SA +L + +G + L I+
Sbjct: 397 NGLDDEGLMLVYEM-QKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-- 453
Query: 246 GYNS-LIFMYSRCGSMEEATLIFQ--EMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
G NS LI MYS+ G + + +F+ A RD ++N++ISG +GH + + KM
Sbjct: 454 GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKV--FESIKVPDVDHY--ACMIDMLGRVGKLE 358
E I P+ +T IL ACS G ++ G+++ F + D + + + ++DM + G ++
Sbjct: 514 EQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIK 573
Query: 359 EA 360
A
Sbjct: 574 YA 575
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 159/361 (44%), Gaps = 46/361 (12%)
Query: 21 KSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSG--NEPDETTW 78
+ GN + AR FD +P+ + V WN ++ G+ + E + ++ M + D T+
Sbjct: 51 QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTY 110
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
+ + +C+ + +++ L + +S+ V +L++M+ C N A + F
Sbjct: 111 SSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLN---APDCF----- 162
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
+ R +F+ M ++ V+WN++I+ Y + G + A + F
Sbjct: 163 ------------------EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGI 204
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL------SILGYNSLIF 252
M+ + KP ++ V+VF A S+S I ++ +KL + +S I
Sbjct: 205 MMRM-EVKPSPVSFVNVFPAV----SISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAIS 259
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKL-ISKMKEDGIEPDRI 311
MY+ G +E + +F R++ +NT+I + +E I+L + + I D +
Sbjct: 260 MYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEV 319
Query: 312 TYIGILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGKLEEAMKLIHS 366
TY+ +A S +E G++ + ++P V + M+ M R G + ++ + S
Sbjct: 320 TYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLS 378
Query: 367 M 367
M
Sbjct: 379 M 379
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+NV + +V Y+K+G +K A F + ER+ V++ M+ GY Q G + LF M
Sbjct: 554 QNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSM 613
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESI-----VRKLDKVKFHSNYFVKTALLDMHA 121
SG +PD T+V V+S+CS G + E + +R++ ++ S ++ + DM
Sbjct: 614 QESGIKPDAITFVAVLSACSYSG--LIDEGLKIFEEMREVYNIQPSSEHYC--CITDMLG 669
Query: 122 KCGNLKAAQEIFDQLG 137
+ G + A E LG
Sbjct: 670 RVGRVNEAYEFVKGLG 685
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 15/237 (6%)
Query: 144 SCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTN 203
S + +S + G+ AR LF+ +P+ TV WN++I G+ N A+ + M T
Sbjct: 41 SIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTA 100
Query: 204 D-SKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEE 262
+ D T S AC +L G L S + +NSL+ MY C + +
Sbjct: 101 PFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPD 160
Query: 263 ------ATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGI 316
+F M +++V++NTLIS G E + M ++P ++++ +
Sbjct: 161 CFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNV 220
Query: 317 LTACSHAGLLEEGQKVFESIKVPDVDHY-------ACMIDMLGRVGKLEEAMKLIHS 366
A S + +++ VF + + D Y + I M +G +E + ++ S
Sbjct: 221 FPAVSISRSIKKAN-VFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDS 276
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 245 bits (625), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 156/459 (33%), Positives = 243/459 (52%), Gaps = 47/459 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAAL-ETVRLFNDM 66
NV ++T YA++G L R F MPE VSWN+++ A+S +L E V F +
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALL--DMHAKCG 124
+G +KL+++ F S ++L ++ +
Sbjct: 509 QRAG----------------------------QKLNRITFSSVLSAVSSLSFGELGKQIH 540
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER-DTVSWNSMIAGY 183
L I D+ + + NA+I+ Y + G++ +F++M ER D V+WNSMI+GY
Sbjct: 541 GLALKNNIADE------ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
N A+ L M+ T + D +V SA + +L G+ + ++
Sbjct: 595 IHNELLAKALDLVWFMLQTGQ-RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
++ ++L+ MYS+CG ++ A F M R+ S+N++ISG A HG G E +KL MK
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 304 DG-IEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKL 357
DG PD +T++G+L+ACSHAGLLEEG K FES+ P ++H++CM D+LGR G+L
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGEL 773
Query: 358 EEAMKLIHSMPMEPHAGIYGSLLNAT-RIH-KQVELGELAAAKLFTVEPHNSSNYVLLSN 415
++ I MPM+P+ I+ ++L A R + ++ ELG+ AA LF +EP N+ NYVLL N
Sbjct: 774 DKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 416 IYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+YA GRW+++ R M+ VKK +SWV VH
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVH 872
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 187/393 (47%), Gaps = 50/393 (12%)
Query: 8 NVVTWTTMVTGYAKS-GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+ V +++ Y K G++ A F + ++ VSWN+++S Y+Q+G R+F+ M
Sbjct: 138 DAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM 197
Query: 67 LSSGNEPDETTWVTVISSCSSLGDP--CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
G+ P E T+ +++++ SL +P L E I+ + K ++ FV + L
Sbjct: 198 QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL-------- 249
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+SA+A+ G LS+AR +FN+M R+ V+ N ++ G
Sbjct: 250 ------------------------VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLV 285
Query: 185 QNGESLMAIKLFKEMISTNDSKPDE-LTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
+ A KLF +M S D P+ + ++S F + + +G+ ++ + I
Sbjct: 286 RQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPE--YSLAEEVGLKKGREVHGHVITTG 343
Query: 244 ILGY-----NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
++ + N L+ MY++CGS+ +A +F M +D VS+N++I+GL +G IE ++
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERY 403
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVF-ESIKVP---DVDHYACMIDMLGRV 354
M+ I P T I L++C+ + GQ++ ES+K+ +V ++ +
Sbjct: 404 KSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET 463
Query: 355 GKLEEAMKLIHSMPMEPHA---GIYGSLLNATR 384
G L E K+ SMP I G+L + R
Sbjct: 464 GYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 171/383 (44%), Gaps = 63/383 (16%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
++V ++ Y ++G+ +AR FD+MP R+ VSW ++SGY+++G E + DM
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 67 LSSGNEPDETTWVTVISSCSSLGDP--CLAESIVRKLDKVKFHSNYFVKTALLDMHAKC- 123
+ G ++ +V+V+ +C +G I + K+ + + V L+ M+ KC
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G++ A F + V +NSVS N++IS Y++ GD A +F+ M
Sbjct: 154 GSVGYALCAFGDIEV-KNSVSWNSIISVYSQAGDQRSAFRIFSSM--------------- 197
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVS-VFSACGHLGSLSLGIWAVSILNEYQIKL 242
+ S+P E T S V +AC SL V +L + +
Sbjct: 198 -----------------QYDGSRPTEYTFGSLVTTAC------SLTEPDVRLLEQIMCTI 234
Query: 243 SILGYNSLIFM-------YSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECI 295
G + +F+ +++ GS+ A +F +M TR+ V+ N L+ GL G E
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 296 KLISKMKE-DGIEPDRITYIGILTACSHAGLLEE-----GQKVFESIKVPDVDHYAC--- 346
KL M + P+ +Y+ +L++ L EE G++V + + +
Sbjct: 295 KLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIG 352
Query: 347 --MIDMLGRVGKLEEAMKLIHSM 367
+++M + G + +A ++ + M
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFM 375
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ +VV + +V Y+K G L A +F+ MP R+ SWN+M+SGYA+ G E ++LF
Sbjct: 651 ESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 66 M-LSSGNEPDETTWVTVISSCSSLG 89
M L PD T+V V+S+CS G
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAG 735
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 239/455 (52%), Gaps = 39/455 (8%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
++N ++ ++ GY ++G+L AR FD+MP+R + +WNAM++G Q E + LF +
Sbjct: 22 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFRE 81
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M G PDE T +V S + L + + I Y +K L
Sbjct: 82 MHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQI----------HGYTIKYGL--------- 122
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+L + NS ++ Y R G L + MP R+ V+WN++I G AQ
Sbjct: 123 ---------ELDLVVNS----SLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQ 169
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
NG + L+K M+ + +P+++T V+V S+C L G + + +
Sbjct: 170 NGCPETVLYLYK-MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 228
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED- 304
+SLI MYS+CG + +A F E D V ++++IS HG G E I+L + M E
Sbjct: 229 VVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQT 288
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEE 359
+E + + ++ +L ACSH+GL ++G ++F+ + P + HY C++D+LGR G L++
Sbjct: 289 NMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQ 348
Query: 360 AMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
A +I SMP++ I+ +LL+A IHK E+ + ++ ++P++S+ YVLL+N++A
Sbjct: 349 AEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHAS 408
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
A RW++V VR MR + VKK SW EH VH
Sbjct: 409 AKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVH 443
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 243/446 (54%), Gaps = 37/446 (8%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
++ Y+KS +R F+ P++S +W++++S +AQ+ ++ M++
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
PD+ + SC+ L + S+ K + ++ FV ++L+DM+AKC
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKC--------- 164
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
G++ +AR +F++MP+R+ V+W+ M+ GYAQ GE+ A
Sbjct: 165 -----------------------GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEA 201
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
+ LFKE + N + D + SV S C + L LG + + S +SL+
Sbjct: 202 LWLFKEALFENLAVND-YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
+YS+CG E A +F E+ ++L +N ++ A H H + I+L +MK G++P+ IT
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 313 YIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
++ +L ACSHAGL++EG+ F+ +K P HYA ++DMLGR G+L+EA+++I +MP
Sbjct: 321 FLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380
Query: 369 MEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGN 428
++P ++G+LL + +HK EL AA K+F + P +S ++ LSN YA GR+++
Sbjct: 381 IDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAK 440
Query: 429 VRNIMRKQGVKKITAWSWVEHPSHVH 454
R ++R +G KK T SWVE + VH
Sbjct: 441 ARKLLRDRGEKKETGLSWVEERNKVH 466
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 131/263 (49%), Gaps = 33/263 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V +++V YAK G + AR FD+MP+R+VV+W+ M+ GYAQ G E + LF + L
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
++ ++ +VIS C++ L I K F S+ FV ++L+ +++KCG +
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A ++F+++ V +N NAM+ A YAQ+
Sbjct: 270 GAYQVFNEVPV-KNLGIWNAMLKA-------------------------------YAQHS 297
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+ I+LFK M + KP+ +T ++V +AC H G + G + + E +I+ + Y
Sbjct: 298 HTQKVIELFKRM-KLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHY 356
Query: 248 NSLIFMYSRCGSMEEATLIFQEM 270
SL+ M R G ++EA + M
Sbjct: 357 ASLVDMLGRAGRLQEALEVITNM 379
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 233/447 (52%), Gaps = 48/447 (10%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y K+ AR FD++PER++ +WNA +S G E + F + P+ T+
Sbjct: 153 YCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITF 212
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
+++CS L + + + F ++ V L+D + KC +++++ IF ++G
Sbjct: 213 CAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGT 272
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE----SLMAIK 194
++ VSW S++A Y QN E S++ ++
Sbjct: 273 --------------------------------KNAVSWCSLVAAYVQNHEDEKASVLYLR 300
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
K+++ T+D + SV SAC + L LG + + ++ +I ++L+ MY
Sbjct: 301 SRKDIVETSD-----FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMY 355
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI--EPDRIT 312
+CG +E++ F EM ++LV+ N+LI G A G + L +M G P+ +T
Sbjct: 356 GKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMT 415
Query: 313 YIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++ +L+ACS AG +E G K+F+S++ P +HY+C++DMLGR G +E A + I M
Sbjct: 416 FVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 475
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVG 427
P++P ++G+L NA R+H + +LG LAA LF ++P +S N+VLLSN +A AGRW E
Sbjct: 476 PIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEAN 535
Query: 428 NVRNIMRKQGVKKITAWSWVEHPSHVH 454
VR ++ G+KK +SW+ + VH
Sbjct: 536 TVREELKGVGIKKGAGYSWITVKNQVH 562
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 189/428 (44%), Gaps = 49/428 (11%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ Y+K + ++AR+ P R+VVSW +++SG AQ+G + F +M G P+
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
+ T+ + +SL P + I H+ + KCG +
Sbjct: 108 DFTFPCAFKAVASLRLPVTGKQI---------HA----------LAVKCGRI-------- 140
Query: 135 QLGVYRNSVSCNAM-ISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAI 193
L V+ V C+A + RL D AR LF+++PER+ +WN+ I+ +G AI
Sbjct: 141 -LDVF---VGCSAFDMYCKTRLRD--DARKLFDEIPERNLETWNAFISNSVTDGRPREAI 194
Query: 194 KLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFM 253
+ F E D P+ +T + +AC L+LG+ ++ + N LI
Sbjct: 195 EAFIEFRRI-DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDF 253
Query: 254 YSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITY 313
Y +C + + +IF EM T++ VS+ +L++ + + L + ++D +E
Sbjct: 254 YGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 313
Query: 314 IGILTACSHAGLLEEGQKVFESIKVPDVDHY----ACMIDMLGRVGKLEEAMKLIHSMPM 369
+L+AC+ LE G+ + V+ + ++DM G+ G +E++ + MP
Sbjct: 314 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMP- 372
Query: 370 EPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHN---SSNYVLLSNIYALAGRWKEV 426
E + SL+ QV ++A A + P + NY+ ++ + R
Sbjct: 373 EKNLVTRNSLIGGYAHQGQV---DMALALFEEMAPRGCGPTPNYMTFVSLLSACSR---A 426
Query: 427 GNVRNIMR 434
G V N M+
Sbjct: 427 GAVENGMK 434
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 147/336 (43%), Gaps = 42/336 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQS----GAALETVRLF 63
+V ++ Y K ++++ I F +M ++ VSW ++++ Y Q+ A++ +R
Sbjct: 243 DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
D++ E + +V+S+C+ + L SI K FV +AL+DM+ KC
Sbjct: 303 KDIV----ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC 358
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G ++ +++ FD++ +N V+ N++I YA G + A LF +M R
Sbjct: 359 GCIEDSEQAFDEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC---------- 407
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKL 242
P+ +T VS+ SAC G++ G+ S+ + Y I+
Sbjct: 408 --------------------GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEP 447
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
Y+ ++ M R G +E A ++M + +S + A HG + L++
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQN-ACRMHGKPQLGLLAAEN 506
Query: 303 EDGIEP-DRITYIGILTACSHAGLLEEGQKVFESIK 337
++P D ++ + + AG E V E +K
Sbjct: 507 LFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELK 542
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 100/230 (43%), Gaps = 13/230 (5%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N +I+ Y++L AR + P R+ VSW S+I+G AQNG A+ F EM
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEM-RREGV 104
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK----LSILGYNSLIFMYSRCGSME 261
P++ T F A + SL L + I + +K L + S MY + +
Sbjct: 105 VPNDFTFPCAFKA---VASLRLPVTGKQI-HALAVKCGRILDVFVGCSAFDMYCKTRLRD 160
Query: 262 EATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS 321
+A +F E+ R+L ++N IS + G E I+ + + P+ IT+ L ACS
Sbjct: 161 DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Query: 322 HAGLLEEGQK----VFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
L G + V S DV +ID G+ ++ + + M
Sbjct: 221 DWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM 270
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 41/222 (18%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+R + + +V Y K G ++ + FD+MPE+++V+ N+++ GYA G + LF +
Sbjct: 342 ERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEE 401
Query: 66 ML--SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M G P+ T+V+++S+CS G E+ ++ D ++ S Y ++ H C
Sbjct: 402 MAPRGCGPTPNYMTFVSLLSACSRAG---AVENGMKIFDSMR--STYGIEPGA--EHYSC 454
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVS-WNSMIAG 182
I D LG R G + A + KMP + T+S W ++
Sbjct: 455 --------IVDMLG----------------RAGMVERAYEFIKKMPIQPTISVWGALQNA 490
Query: 183 YAQNGES----LMAIKLFKEMISTNDSKPDELTMVSVFSACG 220
+G+ L A LFK + DS + + + + F+A G
Sbjct: 491 CRMHGKPQLGLLAAENLFK--LDPKDSG-NHVLLSNTFAAAG 529
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N LI MYS+ E A L+ + R++VS+ +LISGLA +GH + +M+ +G+
Sbjct: 46 NYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVV 105
Query: 308 PDRITYIGILTACSHAGLLEEGQKV----FESIKVPDVDHYACMIDMLGRVGKLEEAMKL 363
P+ T+ A + L G+++ + ++ DV DM + ++A KL
Sbjct: 106 PNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKL 165
Query: 364 IHSMP 368
+P
Sbjct: 166 FDEIP 170
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/450 (32%), Positives = 233/450 (51%), Gaps = 56/450 (12%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+V Y K G + AR FD+M R V++W M++GY + G + L M G P+
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 75 ETTWVTVISSCSSLGDP-------CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
T +++S C GD CL VR+ + +S+ ++T+L+ M+AKC +
Sbjct: 319 AVTIASLVSVC---GDALKVNDGKCLHGWAVRQ----QVYSDIIIETSLISMYAKCKRV- 370
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
DL F +F+ + T W+++IAG QN
Sbjct: 371 -----------------------------DLCFR--VFSGASKYHTGPWSAIIAGCVQNE 399
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
A+ LFK M D +P+ T+ S+ A L L + L + S+
Sbjct: 400 LVSDALGLFKRM-RREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA 458
Query: 248 NSLIFMYSRCGSMEEATLIF----QEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
L+ +YS+CG++E A IF ++ ++D+V + LISG HG G +++ +M
Sbjct: 459 TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 518
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGKLE 358
G+ P+ IT+ L ACSH+GL+EEG +F + + +HY C++D+LGR G+L+
Sbjct: 519 SGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLD 578
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
EA LI ++P EP + ++G+LL A H+ V+LGE+AA KLF +EP N+ NYVLL+NIYA
Sbjct: 579 EAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYA 638
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
GRWK++ VR++M G++K S +E
Sbjct: 639 ALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 203/439 (46%), Gaps = 55/439 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
+T+ YA G++ AR F++MP+ S++S+N ++ Y + G + + +F M+S G +
Sbjct: 53 STLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK 112
Query: 73 --PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
PD T+ V + L L + ++ + F + +V+ ALL M+ G ++ A+
Sbjct: 113 CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMAR 172
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
++FD + R+ +S N MIS GY +NG
Sbjct: 173 DVFDVMK-NRDVISWNTMIS-------------------------------GYYRNGYMN 200
Query: 191 MAIKLFKEMISTNDS-KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS 249
A+ +F M+ N+S D T+VS+ CGHL L +G ++ E ++ I N+
Sbjct: 201 DALMMFDWMV--NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
L+ MY +CG M+EA +F M RD++++ +I+G G ++L M+ +G+ P+
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 310 RITYIGILTACSHAGLLEEG---------QKVFESIKVPDVDHYACMIDMLGRVGKLEEA 360
+T +++ C A + +G Q+V+ I + +I M + +++
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE-----TSLISMYAKCKRVDLC 373
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVE--LGELAAAKLFTVEPHNSSNYVLLSNIYA 418
+ + S + H G + +++ ++ V LG + VEP+ ++ LL A
Sbjct: 374 FR-VFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAA 432
Query: 419 LAGRWKEVGNVRNIMRKQG 437
LA ++ N+ + K G
Sbjct: 433 LAD-LRQAMNIHCYLTKTG 450
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 179/392 (45%), Gaps = 50/392 (12%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R+ ++ Y G ++ AR FD M R V+SWN M+SGY ++G + + +F+ M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
++ + D T V+++ C L D + ++ + +++ + VK AL++M+ KCG +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
A+ +FD++ RD ++W MI GY ++
Sbjct: 270 DEARFVFDRM--------------------------------ERRDVITWTCMINGYTED 297
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI----WAVSILNEYQIKL 242
G+ A++L + ++ +P+ +T+ S+ S CG ++ G WAV Q+
Sbjct: 298 GDVENALELCR-LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAV----RQQVYS 352
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
I+ SLI MY++C ++ +F + ++ +I+G + + + L +M+
Sbjct: 353 DIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMR 412
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLE 358
+ +EP+ T +L A + L + + + + +D ++ + + G LE
Sbjct: 413 REDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLE 472
Query: 359 EAMKLIHSMPMEPHAG----IYGSLLNATRIH 386
A K+ + + E H ++G+L++ +H
Sbjct: 473 SAHKIFNGIQ-EKHKSKDVVLWGALISGYGMH 503
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
T +V Y+K G L++A F+ + E+ VV W A++SGY G +++F +M+
Sbjct: 459 TGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVR 518
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKL---DKVKFHSNYFVKTALLDMHAKCGN 125
SG P+E T+ + +++CS G ++ R + K SN++ T ++D+ + G
Sbjct: 519 SGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHY--TCIVDLLGRAGR 576
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISA-----YARLGDLSFARDLFNKMPE 170
L A + + S A+++A +LG+++ A LF PE
Sbjct: 577 LDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA-ANKLFELEPE 625
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 243 bits (619), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/437 (34%), Positives = 228/437 (52%), Gaps = 54/437 (12%)
Query: 32 FDKMPERSVVSWNAMLSGYAQS-GAALETVRLFNDMLSSG-NEPDETTWVTVISSCSSLG 89
FD + S WN ++ A E L+ ML G + PD+ T+ V+ +C+ +
Sbjct: 106 FDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIF 165
Query: 90 DPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMI 149
+ + ++ K F + +V L+ ++ CG C
Sbjct: 166 GFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG--------------------C---- 201
Query: 150 SAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDE 209
L AR +F++MPER VSWNSMI + GE A++LF+EM +PD
Sbjct: 202 --------LDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM--QRSFEPDG 251
Query: 210 LTMVSVFSACGHLGSLSLGIWAVSIL---NEYQIKLSILGYNSLIFMYSRCGSMEEATLI 266
TM SV SAC LGSLSLG WA + L + + + +L NSLI MY +CGS+ A +
Sbjct: 252 YTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQV 311
Query: 267 FQEMATRDLVSYNTLISGLASHGHGIECIKLISKM--KEDGIEPDRITYIGILTACSHAG 324
FQ M RDL S+N +I G A+HG E + +M K + + P+ +T++G+L AC+H G
Sbjct: 312 FQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRG 371
Query: 325 LLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSL 379
+ +G++ F+ + P ++HY C++D++ R G + EA+ ++ SMPM+P A I+ SL
Sbjct: 372 FVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSL 431
Query: 380 LNA-TRIHKQVELGELAAAKLF-TVEPHNSSN------YVLLSNIYALAGRWKEVGNVRN 431
L+A + VEL E A + T E + SSN YVLLS +YA A RW +VG VR
Sbjct: 432 LDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRK 491
Query: 432 IMRKQGVKKITAWSWVE 448
+M + G++K S +E
Sbjct: 492 LMSEHGIRKEPGCSSIE 508
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 141/296 (47%), Gaps = 43/296 (14%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y G L AR FD+MPERS+VSWN+M+ + G ++LF +M S EPD T
Sbjct: 196 YGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSF-EPDGYTM 254
Query: 79 VTVISSCSSLGDPCLA----ESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
+V+S+C+ LG L ++RK D V + VK +L++M+ KCG+L+ A+++F
Sbjct: 255 QSVLSACAGLGSLSLGTWAHAFLLRKCD-VDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ 313
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
+ R+ S NAMI +A G A + F++M ++
Sbjct: 314 GMQ-KRDLASWNAMILGFATHGRAEEAMNFFDRMVDK----------------------- 349
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQIKLSILGYNSLIFM 253
+ +P+ +T V + AC H G ++ G ++ +Y I+ ++ Y ++ +
Sbjct: 350 -------RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDL 402
Query: 254 YSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISK----MKED 304
+R G + EA + M + D V + +L+ G +E + I++ KED
Sbjct: 403 IARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKED 458
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 35/201 (17%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V+ +++ Y K G+L+ A F M +R + SWNAM+ G+A G A E + F+ M+
Sbjct: 288 DVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMV 347
Query: 68 SSGN--EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
P+ T+V ++ +C+ G V YF DM +
Sbjct: 348 DKRENVRPNSVTFVGLLIACNHRG-------------FVNKGRQYF------DMMVRDYC 388
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER-DTVSWNSMIAGYA 184
++ A E + ++ AR G ++ A D+ MP + D V W S++
Sbjct: 389 IEPALEHY------------GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACC 436
Query: 185 QNGESL-MAIKLFKEMISTND 204
+ G S+ ++ ++ + +I T +
Sbjct: 437 KKGASVELSEEIARNIIGTKE 457
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 242 bits (617), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 234/448 (52%), Gaps = 42/448 (9%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++ ++V Y G + A F +MP R VVSW +++G+ ++G E + F+ M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM- 198
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
EP+ T+V V+ S +G L + I H + +L+ +
Sbjct: 199 --DVEPNLATYVCVLVSSGRVGCLSLGKGI---------HGLILKRASLISLETG----- 242
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
NA+I Y + LS A +F ++ ++D VSWNSMI+G
Sbjct: 243 ------------------NALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCE 284
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
S AI LF M +++ KPD + SV SAC LG++ G W + IK
Sbjct: 285 RSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG 344
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
+++ MY++CG +E A IF + ++++ ++N L+ GLA HGHG+E ++ +M + G +
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIK------VPDVDHYACMIDMLGRVGKLEEAM 361
P+ +T++ L AC H GL++EG++ F +K P ++HY CMID+L R G L+EA+
Sbjct: 405 PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEAL 464
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQV-ELGELAAAKLFTVEPHNSSNYVLLSNIYALA 420
+L+ +MP++P I G++L+A + + EL + +E +S YVLLSNI+A
Sbjct: 465 ELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAAN 524
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSWVE 448
RW +V +R +M+ +G+ K+ S++E
Sbjct: 525 RRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 42/353 (11%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIV 98
S S+N +LS YA T+ + +S+G PD T+ V +C + I
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 99 RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDL 158
+ K+ F+ + +V+ +L+ + CG + A ++F ++ V R+ VS +I+ + R G
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPV-RDVVSWTGIITGFTRTGLY 188
Query: 159 SFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA 218
A D F+KM D +P+ T V V +
Sbjct: 189 KEALDTFSKM-----------------------------------DVEPNLATYVCVLVS 213
Query: 219 CGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSY 278
G +G LSLG ++ + +S+ N+LI MY +C + +A +F E+ +D VS+
Sbjct: 214 SGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSW 273
Query: 279 NTLISGLASHGHGIECIKLISKMK-EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
N++ISGL E I L S M+ GI+PD +L+AC+ G ++ G+ V E I
Sbjct: 274 NSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL 333
Query: 338 VP----DVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIH 386
D ++DM + G +E A+++ + + + + +LL IH
Sbjct: 334 TAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI-RSKNVFTWNALLGGLAIH 385
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 124/261 (47%), Gaps = 13/261 (4%)
Query: 113 KTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDL-SFARDLFNKM 168
K+ LL++ ++C +L+ ++I QL + R+ + N +++ + D S++ + + +
Sbjct: 6 KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSI 65
Query: 169 PE-RDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSL 227
+ S+N++++ YA + + I +K +S N PD T VF ACG +
Sbjct: 66 RSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVS-NGFSPDMFTFPPVFKACGKFSGIRE 124
Query: 228 GIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLAS 287
G I+ + I NSL+ Y CG A +F EM RD+VS+ +I+G
Sbjct: 125 GKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTR 184
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK----VFESIKVPDVDH 343
G E + SKM +EP+ TY+ +L + G L G+ + + + ++
Sbjct: 185 TGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLET 241
Query: 344 YACMIDMLGRVGKLEEAMKLI 364
+IDM + +L +AM++
Sbjct: 242 GNALIDMYVKCEQLSDAMRVF 262
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 154/520 (29%), Positives = 260/520 (50%), Gaps = 84/520 (16%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGA-ALETVRLFN 64
+ ++V + +T Y++SG+ + AR FD+M + ++SWN++LSG +Q G E V +F
Sbjct: 206 ESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
DM+ G E D ++ +VI++C D LA I K + S V L+ ++KCG
Sbjct: 266 DMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCG 325
Query: 125 NLKAAQEIFDQL-----------------------------GVYRNSVS----------- 144
L+A + +F Q+ GVY N V+
Sbjct: 326 VLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 145 ------------C------------NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
C N+ I+ YA+ L A+ F + R+ +SWN+MI
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
+G+AQNG S A+K+F + + ++ P+E T SV +A +S V
Sbjct: 446 SGFAQNGFSHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDIS-----VKQGQRCHA 498
Query: 241 KLSILGYNS-------LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIE 293
L LG NS L+ MY++ G+++E+ +F EM+ ++ + ++IS +SHG
Sbjct: 499 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 558
Query: 294 CIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFES-IKV----PDVDHYACMI 348
+ L KM ++ + PD +T++ +LTAC+ G++++G ++F I+V P +HY+CM+
Sbjct: 559 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 618
Query: 349 DMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSS 408
DMLGR G+L+EA +L+ +P P + S+L + R+H V++G A ++P S
Sbjct: 619 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 678
Query: 409 NYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
+YV + NIYA W + +R MRK+ V K +SW++
Sbjct: 679 SYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWID 718
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 208/486 (42%), Gaps = 93/486 (19%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y K+G A F+ + + VVSWN +LSG+ + AL V M S+G D T+
Sbjct: 121 YRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVV---RMKSAGVVFDAFTY 177
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
T +S C L + + K S+ V + + M+++ G+ + A+ +FD+
Sbjct: 178 STALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE--- 234
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE-SLMAIKLFK 197
+SF +D +SWNS+++G +Q G A+ +F+
Sbjct: 235 -------------------MSF----------KDMISWNSLLSGLSQEGTFGFEAVVIFR 265
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYS 255
+M+ + D ++ SV + C H L L I + I Y+ L + N L+ YS
Sbjct: 266 DMMREG-VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEV--GNILMSRYS 322
Query: 256 RCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+CG +E +F +M+ R++VS+ T+IS + + + + M+ DG+ P+ +T++G
Sbjct: 323 KCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVG 377
Query: 316 ILTA----------------CSHAGL-------------------LEEGQKVFESIKVPD 340
++ A C G LE+ +K FE I +
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE 437
Query: 341 VDHYACMIDMLGRVGKLEEAMKLIHSMPME--PHAGIYGSLLNATRIHKQVEL--GELAA 396
+ + MI + G EA+K+ S E P+ +GS+LNA + + + G+
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCH 497
Query: 397 AKLFTVEPHNSSNYV--LLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWV--EHPSH 452
A L + NS V L ++YA G E V N M + K W+ + + SH
Sbjct: 498 AHLLKL-GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQ---KNQFVWTSIISAYSSH 553
Query: 453 VHCETI 458
ET+
Sbjct: 554 GDFETV 559
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/433 (22%), Positives = 187/433 (43%), Gaps = 63/433 (14%)
Query: 61 RLFNDMLSSGNEPDETTWVT-VISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTAL-LD 118
R+ + + ++ + TT + IS P A SI ++ ++ + + + L L
Sbjct: 25 RIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLA 84
Query: 119 MHAKCGNLKAAQEI--FDQLGVYRNSVSC-NAMISAYARLGDLSFARDLFNKMPERDTVS 175
+ A G+LK +I F + + V NA++ Y + G A +F + + D VS
Sbjct: 85 LKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVS 144
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL 235
WN++++G+ N +A+ M S D T + S C LG+ S +
Sbjct: 145 WNTILSGFDDNQ---IALNFVVRMKSAG-VVFDAFTYSTALSFCVGSEGFLLGLQLQSTV 200
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHG-HGIEC 294
+ ++ ++ NS I MYSR GS A +F EM+ +D++S+N+L+SGL+ G G E
Sbjct: 201 VKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEA 260
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSH-------------------------------- 322
+ + M +G+E D +++ ++T C H
Sbjct: 261 VVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSR 320
Query: 323 ---AGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME---PHAGIY 376
G+LE + VF + +V + MI ++A+ + +M + P+ +
Sbjct: 321 YSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTF 375
Query: 377 GSLLNATRIHKQVELG----ELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNI 432
L+NA + ++Q++ G L F EP ++++ L YA +++ + + +
Sbjct: 376 VGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITL---YA---KFEALEDAKKA 429
Query: 433 MRKQGVKKITAWS 445
++I +W+
Sbjct: 430 FEDITFREIISWN 442
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 241 bits (615), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 149/419 (35%), Positives = 232/419 (55%), Gaps = 18/419 (4%)
Query: 40 VVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP-DETTWVTVISSCSSLGDPCLAESIV 98
++S LS YA G + + LF M SS P D + + SC++ P L S+
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 99 RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDL 158
K F SN FV ALLDM+ KC ++ A+++FD++ RN+V NAMIS Y G +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIP-QRNAVVWNAMISHYTHCGKV 130
Query: 159 SFARDLFNKMP-ERDTVSWNSMIAGYAQNGE-SLMAIKLFKEMISTNDSKPDELTMVSVF 216
A +L+ M + S+N++I G + S AI+ +++MI KP+ +T++++
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFR-FKPNLITLLALV 189
Query: 217 SACGHLGSLSLGIWAVSILNEYQIKLSILGY----NSLIFMYSRCGSMEEATLIFQEMAT 272
SAC +G+ L + ++ Y + I + + L+ Y RCGS+ L+F M
Sbjct: 190 SACSAIGAFRL----IKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMED 245
Query: 273 RDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
RD+V++++LIS A HG +K +M+ + PD I ++ +L ACSHAGL +E
Sbjct: 246 RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVY 305
Query: 333 FESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHK 387
F+ ++ DHY+C++D+L RVG+ EEA K+I +MP +P A +G+LL A R +
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
Query: 388 QVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSW 446
++EL E+AA +L VEP N +NYVLL IY GR +E +R M++ GVK SW
Sbjct: 366 EIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 13/273 (4%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N ++ Y K ++ AR FD++P+R+ V WNAM+S Y G E V L+ M
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM- 140
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCL-AESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
P+E+++ +I D A RK+ + +F N AL+ + G
Sbjct: 141 --DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 127 KAAQEIFDQLGVYRNSVSCN-----AMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
+ +EI +RN + + ++ AY R G + + + +F+ M +RD V+W+S+I+
Sbjct: 199 RLIKEIHSY--AFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLIS 256
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQI 240
YA +G++ A+K F+EM PD++ ++V AC H G ++ + +Y +
Sbjct: 257 AYALHGDAESALKTFQEM-ELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGL 315
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATR 273
+ S Y+ L+ + SR G EEA + Q M +
Sbjct: 316 RASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK 348
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 91/195 (46%), Gaps = 34/195 (17%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+V Y + G++ ++ FD M +R VV+W++++S YA G A ++ F +M + PD
Sbjct: 223 LVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPD 282
Query: 75 ETTWVTVISSCSSLGDPCLA-ESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF 133
+ ++ V+ +CS G LA E++V YF + M G L+A+++ +
Sbjct: 283 DIAFLNVLKACSHAG---LADEALV-----------YFKR-----MQGDYG-LRASKDHY 322
Query: 134 DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTV-SWNSMIAGYAQNGESLMA 192
SC ++ +R+G A + MPE+ T +W +++ GE +A
Sbjct: 323 ----------SC--LVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELA 370
Query: 193 IKLFKEMISTNDSKP 207
+E++ P
Sbjct: 371 EIAARELLMVEPENP 385
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 144/447 (32%), Positives = 237/447 (53%), Gaps = 48/447 (10%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN- 71
+ ++T Y+K G A + F M E+ +V+W +++SG ++G E +++F DM +
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 72 -EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
+PD +V ++C+ L + + K N FV ++L+D+++KCG + A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
++ F M + V+WNSMI+ Y++N
Sbjct: 532 KV--------------------------------FTSMSTENMVAWNSMISCYSRNNLPE 559
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG---- 246
++I LF M+S PD +++ SV A SL G L+ Y ++L I
Sbjct: 560 LSIDLFNLMLSQG-IFPDSVSITSVLVAISSTASLLKG----KSLHGYTLRLGIPSDTHL 614
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
N+LI MY +CG + A IF++M + L+++N +I G SHG I + L +MK+ G
Sbjct: 615 KNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAM 361
PD +T++ +++AC+H+G +EEG+ +FE +K P+++HYA M+D+LGR G LEEA
Sbjct: 675 SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAY 734
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAG 421
I +MP+E + I+ LL+A+R H VELG L+A KL +EP S YV L N+Y AG
Sbjct: 735 SFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAG 794
Query: 422 RWKEVGNVRNIMRKQGVKKITAWSWVE 448
E + +M+++G+ K SW+E
Sbjct: 795 LKNEAAKLLGLMKEKGLHKQPGCSWIE 821
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 173/360 (48%), Gaps = 37/360 (10%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T++++ Y+K G + A F + ++ + WNAM++ YA++ + LF M
Sbjct: 311 TSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL 370
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
PD T VIS CS LG +S+ +L K S +++ALL +++KCG
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG-------- 422
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
C+ AY +F M E+D V+W S+I+G +NG+ A
Sbjct: 423 ------------CDP--DAYL----------VFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 193 IKLFKEMISTNDS-KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLI 251
+K+F +M +DS KPD M SV +AC L +L G+ + + + L++ +SLI
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
+YS+CG E A +F M+T ++V++N++IS + + I L + M GI PD +
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSV 578
Query: 312 TYIGILTACSHAGLLEEGQKVFE---SIKVPDVDHYA-CMIDMLGRVGKLEEAMKLIHSM 367
+ +L A S L +G+ + + +P H +IDM + G + A + M
Sbjct: 579 SITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM 638
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 174/368 (47%), Gaps = 46/368 (12%)
Query: 13 TTMVTGYAKSG-NLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN 71
T ++ Y K G ++ R++ + + +VV WN M+ G+ SG ++ L+ ML+ N
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY--MLAKNN 266
Query: 72 EPD--ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
T++ + +CS + I + K+ H++ +V T+LL M++KCG + A
Sbjct: 267 SVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEA 326
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSF-ARDLFNKMPERDTVSWNSMIAGYAQNGE 188
+ +F + R + NAM++AYA D + A DLF M ++ +
Sbjct: 327 ETVFSCVVDKRLEI-WNAMVAAYAE-NDYGYSALDLFGFMRQKSVL-------------- 370
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
PD T+ +V S C LG + G + L + I+ + +
Sbjct: 371 ------------------PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIES 412
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK--EDGI 306
+L+ +YS+CG +A L+F+ M +D+V++ +LISGL +G E +K+ MK +D +
Sbjct: 413 ALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESI----KVPDVDHYACMIDMLGRVGKLEEAMK 362
+PD + AC+ L G +V S+ V +V + +ID+ + G E A+K
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALK 532
Query: 363 LIHSMPME 370
+ SM E
Sbjct: 533 VFTSMSTE 540
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 160/333 (48%), Gaps = 38/333 (11%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
NV ++++ Y+K G + A F M ++V+WN+M+S Y+++ ++ LFN ML
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
S G PD + +V+ + SS +S+ ++ S+ +K AL+DM+ KCG K
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A+ IF ++ +++ ++ N MI Y GD A LF++M + G
Sbjct: 630 YAENIFKKMQ-HKSLITWNLMIYGYGSHGDCITALSLFDEMK---------------KAG 673
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQIKLSILG 246
ES PD++T +S+ SAC H G + G + +Y I+ ++
Sbjct: 674 ES-----------------PDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
Y +++ + R G +EEA + M D + L+S +H H +E + ++S K
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTH-HNVE-LGILSAEKLLR 774
Query: 306 IEPDR-ITYIGILTACSHAGLLEEGQKVFESIK 337
+EP+R TY+ ++ AGL E K+ +K
Sbjct: 775 MEPERGSTYVQLINLYMEAGLKNEAAKLLGLMK 807
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 164/420 (39%), Gaps = 83/420 (19%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPE-------RSVVSWNAMLSGYAQSGAALETVRLFND 65
T++V Y K G L A FD + R V WN+M+ GY + E V F
Sbjct: 99 TSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRR 158
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAE--SIVRKLDKVKFHSNYFVKTALLDMHAKC 123
ML G PD + V+S G+ E I + + ++ F+KTAL+DM+ K
Sbjct: 159 MLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKF 218
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G A +F ++ + + V WN MI G+
Sbjct: 219 GLSIDAWRVFVEIE-------------------------------DKSNVVLWNVMIVGF 247
Query: 184 AQNGESLMAIKLFKEMISTNDS-KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
+G ++ L+ M++ N+S K + AC + G + + +
Sbjct: 248 GGSGICESSLDLY--MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
SL+ MYS+CG + EA +F + + L +N +++ A + +G + L M+
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQK------------------------------- 331
+ + PD T +++ CS GL G+
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 332 ----VFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM-----PMEPHAGIYGSLLNA 382
VF+S++ D+ + +I L + GK +EA+K+ M ++P + I S+ NA
Sbjct: 426 DAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNA 485
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 138/332 (41%), Gaps = 38/332 (11%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDET---TWVTVISSCSSLGDPCLAE 95
S S N+ + Q G L+ + L++ G+ P T T+ +++ +CS+L + +
Sbjct: 23 SPASINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGK 80
Query: 96 SIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARL 155
+I + + + + F+ T+L++M+ KCG L A ++FD ++ VS
Sbjct: 81 TIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVS----------- 129
Query: 156 GDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSV 215
RD WNSMI GY + + F+ M+ +PD ++ V
Sbjct: 130 --------------ARDVTVWNSMIDGYFKFRRFKEGVGCFRRML-VFGVRPDAFSLSIV 174
Query: 216 FSACGHLGSLSL--GIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR 273
S G+ G + + +LI MY + G +A +F E+ +
Sbjct: 175 VSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDK 234
Query: 274 -DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
++V +N +I G G + L K + ++ ++ G L ACS + G+++
Sbjct: 235 SNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI 294
Query: 333 FESIKVPDV--DHYAC--MIDMLGRVGKLEEA 360
+ + D Y C ++ M + G + EA
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEA 326
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/448 (31%), Positives = 232/448 (51%), Gaps = 41/448 (9%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
+ +V Y K L+ AR F KMP +S+V+WN+M+ GY G + V + N M+ G
Sbjct: 247 SALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR 306
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTAL-LDMHAKCGNLKAAQE 131
P +TT +++ +CS R L KF Y +++ + D++ C
Sbjct: 307 PSQTTLTSILMACSR----------SRNLLHGKFIHGYVIRSVVNADIYVNC-------- 348
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
++I Y + G+ + A +F+K + SWN MI+ Y G
Sbjct: 349 ---------------SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFK 393
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLI 251
A++++ +M+S KPD +T SV AC L +L G ++E +++ L ++L+
Sbjct: 394 AVEVYDQMVSVG-VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALL 452
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
MYS+CG+ +EA IF + +D+VS+ +IS SHG E + +M++ G++PD +
Sbjct: 453 DMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGV 512
Query: 312 TYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHS 366
T + +L+AC HAGL++EG K F ++ P ++HY+CMID+LGR G+L EA ++I
Sbjct: 513 TLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Query: 367 MP-MEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
P +A + +L +A +H + LG+ A L P ++S Y++L N+YA W
Sbjct: 573 TPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDA 632
Query: 426 VGNVRNIMRKQGVKKITAWSWVEHPSHV 453
VR M++ G++K SW+E V
Sbjct: 633 ARRVRLKMKEMGLRKKPGCSWIEMSDKV 660
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 179/365 (49%), Gaps = 37/365 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+VV +++V YAK + + FD+MPER V SWN ++S + QSG A + + LF M
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SSG EP+ + IS+CS L + I RK K F + +V +AL+DM+ KC L+
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A+E+F KMP + V+WNSMI GY G
Sbjct: 261 VAREVF--------------------------------QKMPRKSLVAWNSMIKGYVAKG 288
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+S +++ MI ++P + T+ S+ AC +L G + + + I
Sbjct: 289 DSKSCVEILNRMI-IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVN 347
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
SLI +Y +CG A +F + S+N +IS S G+ + +++ +M G++
Sbjct: 348 CSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVK 407
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH----YACMIDMLGRVGKLEEAMKL 363
PD +T+ +L ACS LE+G+++ SI ++ + ++DM + G +EA ++
Sbjct: 408 PDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRI 467
Query: 364 IHSMP 368
+S+P
Sbjct: 468 FNSIP 472
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 175/357 (49%), Gaps = 39/357 (10%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERS-VVSWNAMLSGYAQSGAALETVRLFN 64
+R+VV +++ Y + +AR F+ RS V WN+++SGY+++ +T+ +F
Sbjct: 36 RRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFK 95
Query: 65 DMLS-SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+L+ S PD T+ VI + +LG L I + K + + V ++L+ M+AK
Sbjct: 96 RLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK- 154
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
++ NS+ +F++MPERD SWN++I+ +
Sbjct: 155 ------------FNLFENSL-------------------QVFDEMPERDVASWNTVISCF 183
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
Q+GE+ A++LF M S+ +P+ +++ SAC L L G + +L
Sbjct: 184 YQSGEAEKALELFGRMESSG-FEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
++L+ MY +C +E A +FQ+M + LV++N++I G + G C++++++M
Sbjct: 243 EYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMII 302
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQ----KVFESIKVPDVDHYACMIDMLGRVGK 356
+G P + T IL ACS + L G+ V S+ D+ +ID+ + G+
Sbjct: 303 EGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 134/267 (50%), Gaps = 12/267 (4%)
Query: 114 TALLDMHAKCGN-------LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFN 166
+ LL + +C N +K + LG+ R+ V C ++I+ Y D AR +F
Sbjct: 4 SKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE 63
Query: 167 KMPER-DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSL 225
R D WNS+++GY++N +++FK +++ + PD T +V A G LG
Sbjct: 64 NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGRE 123
Query: 226 SLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGL 285
LG +++ + ++ +SL+ MY++ E + +F EM RD+ S+NT+IS
Sbjct: 124 FLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCF 183
Query: 286 ASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI--KVPDVDH 343
G + ++L +M+ G EP+ ++ ++ACS LE G+++ K ++D
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 344 Y--ACMIDMLGRVGKLEEAMKLIHSMP 368
Y + ++DM G+ LE A ++ MP
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMP 270
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 236/437 (54%), Gaps = 36/437 (8%)
Query: 23 GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVI 82
G+L A F +P+ WNA++ G+A S + ML + V +
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 83 SSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNS 142
+ CS C + +A+ +H + ++ G+ +S
Sbjct: 111 T-CSFTLKAC---------------ARALCSSAMDQLHCQ----------INRRGLSADS 144
Query: 143 VSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIST 202
+ C ++ AY++ GDL A LF++MP RD SWN++IAG + A++L+K M T
Sbjct: 145 LLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRM-ET 203
Query: 203 NDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEE 262
+ E+T+V+ AC HLG + G +I + Y +++ N+ I MYS+CG +++
Sbjct: 204 EGIRRSEVTVVAALGACSHLGDVKEG---ENIFHGYS-NDNVIVSNAAIDMYSKCGFVDK 259
Query: 263 ATLIFQEM-ATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS 321
A +F++ + +V++NT+I+G A HG +++ K++++GI+PD ++Y+ LTAC
Sbjct: 260 AYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACR 319
Query: 322 HAGLLEEGQKVFESIKVPDVD----HYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYG 377
HAGL+E G VF ++ V+ HY C++D+L R G+L EA +I SM M P ++
Sbjct: 320 HAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQ 379
Query: 378 SLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQG 437
SLL A+ I+ VE+ E+A+ ++ + +N ++VLLSN+YA GRWK+VG VR+ M +
Sbjct: 380 SLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQ 439
Query: 438 VKKITAWSWVEHPSHVH 454
VKKI S++E +H
Sbjct: 440 VKKIPGLSYIEAKGTIH 456
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 144/299 (48%), Gaps = 39/299 (13%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
TT++ Y+K+G+L +A FD+MP R V SWNA+++G A E + L+ M + G
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
E T V + +CS LGD E+I + N V A +DM++KCG + A ++
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIFHGYS----NDNVIVSNAAIDMYSKCGFVDKAYQV 263
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
F+Q ++ V+ N MI+ +A G+ A ++F+K+ +
Sbjct: 264 FEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED---------------------- 301
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
N KPD+++ ++ +AC H G + G+ + + ++ ++ Y ++
Sbjct: 302 ----------NGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVD 351
Query: 253 MYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHGHGIECIKLISK-MKEDGIEPD 309
+ SR G + EA I M+ D V + +L+ G + +E ++ S+ +KE G+ D
Sbjct: 352 LLSRAGRLREAHDIICSMSMIPDPVLWQSLL-GASEIYSDVEMAEIASREIKEMGVNND 409
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 119 MHAKC---GNLKAAQEIFDQLGVYRNSVSCNAMIS--AYARLGDLSFARDLFNKMPERDT 173
M KC +K Q F G +++S + ++ A + GDLSFA +F +P+ T
Sbjct: 9 MIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLT 68
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMISTNDS-----KPDELTMVSVFSACGHLGSLSLG 228
WN++I G+A + +A ++ M+ + S + D LT AC S
Sbjct: 69 NDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 229 IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASH 288
+N + L +L+ YS+ G + A +F EM RD+ S+N LI+GL S
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSG 188
Query: 289 GHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMI 348
E ++L +M+ +GI +T + L ACSH G ++EG+ +F +V I
Sbjct: 189 NRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAI 248
Query: 349 DMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQ 388
DM + G +++A ++ + + +++ +H +
Sbjct: 249 DMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGE 288
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 147/461 (31%), Positives = 236/461 (51%), Gaps = 51/461 (11%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQ-----SGAALETVRL 62
++V T ++ YAK+G+LK A F MP ++VV++NAM+SG+ Q A+ E +L
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F DM G EP +T+ V+ +CS+ I + K F S+ F+ +AL+++
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL--- 402
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
YA +G F ++D SW SMI
Sbjct: 403 -----------------------------YALMGSTEDGMQCFASTSKQDIASWTSMIDC 433
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
+ QN + A LF+++ S++ +P+E T+ + SAC +LS G + Y IK
Sbjct: 434 HVQNEQLESAFDLFRQLFSSH-IRPEEYTVSLMMSACADFAALSSG----EQIQGYAIKS 488
Query: 243 SILGYNSL----IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
I + S+ I MY++ G+M A +F E+ D+ +Y+ +IS LA HG E + +
Sbjct: 489 GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIF 548
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGR 353
MK GI+P++ ++G+L AC H GL+ +G K F+ +K P+ H+ C++D+LGR
Sbjct: 549 ESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGR 608
Query: 354 VGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLL 413
G+L +A LI S + H + +LL++ R++K +G+ A +L +EP S +YVLL
Sbjct: 609 TGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLL 668
Query: 414 SNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
NIY +G VR +MR +GVKK A SW+ + H
Sbjct: 669 HNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTH 709
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 177/384 (46%), Gaps = 46/384 (11%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y K L AR FD+MPER+++S+N+++SGY Q G + + LF + + + D+ T+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
+ C D L E + + F+ L+DM++KCG L A +FD+
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD- 210
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
R+ VS N++IS Y R+G +L KM RD ++ + G
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKM-HRDGLNLTTYALG---------------- 253
Query: 199 MISTNDSKPDELTMVSVFSACG---HLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYS 255
SV AC + G + G+ + ++ I+ +L+ MY+
Sbjct: 254 ---------------SVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYA 298
Query: 256 RCGSMEEATLIFQEMATRDLVSYNTLISGLASHGH-----GIECIKLISKMKEDGIEPDR 310
+ GS++EA +F M ++++V+YN +ISG E KL M+ G+EP
Sbjct: 299 KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSP 358
Query: 311 ITYIGILTACSHAGLLEEGQKVFESIKVPDV--DHY--ACMIDMLGRVGKLEEAMKLIHS 366
T+ +L ACS A LE G+++ I + D + + +I++ +G E+ M+ S
Sbjct: 359 STFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFAS 418
Query: 367 MPMEPHAGIYGSLLNATRIHKQVE 390
+ A + S+++ ++Q+E
Sbjct: 419 TSKQDIAS-WTSMIDCHVQNEQLE 441
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 167/407 (41%), Gaps = 82/407 (20%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+ V ++ Y+K G L A FD+ ER VSWN+++SGY + GAA E + L M
Sbjct: 181 QQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKM 240
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPC--LAESIVRK-------LDKVKFHSNYFVKTALL 117
G +V+ +C C L E + K K+ + V+TALL
Sbjct: 241 HRDGLNLTTYALGSVLKAC------CINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALL 294
Query: 118 DMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWN 177
DM+AK G+LK A ++F L +N V+ NAMIS + ++ +++
Sbjct: 295 DMYAKNGSLKEAIKLF-SLMPSKNVVTYNAMISGFLQMDEIT------------------ 335
Query: 178 SMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSIL 235
+ S A KLF +M +P T V AC +L G I A+
Sbjct: 336 --------DEASSEAFKLFMDM-QRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICK 386
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECI 295
N +Q +G ++LI +Y+ GS E+ F + +D+ S+ ++I +
Sbjct: 387 NNFQSD-EFIG-SALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAF 444
Query: 296 KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV-----------FESIKV------ 338
L ++ I P+ T +++AC+ L G+++ F S+K
Sbjct: 445 DLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMY 504
Query: 339 ------------------PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
PDV Y+ MI L + G EA+ + SM
Sbjct: 505 AKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESM 551
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MY +C + A +F M R+++S+N+LISG G + ++L + +E ++ D+ T
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 313 YIGILTACSHAGLLEEGQKVFESIKVPDVDHYA----CMIDMLGRVGKLEEAMKLI 364
Y G L C L+ G+ + + V + +IDM + GKL++AM L
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 242/455 (53%), Gaps = 46/455 (10%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
V T ++ AR F+ M E +V +N+M GY++ LE LF ++L
Sbjct: 63 VAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE 122
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
G PD T+ +++ +C+ + + L++ + +H C ++K
Sbjct: 123 DGILPDNYTFPSLLKACA----------VAKALEEGR------------QLH--CLSMK- 157
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
LG+ N C +I+ Y D+ AR +F+++ E V +N+MI GYA+
Sbjct: 158 -------LGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY- 247
A+ LF+EM KP+E+T++SV S+C LGSL LG W +++Y K S Y
Sbjct: 211 PNEALSLFREM-QGKYLKPNEITLLSVLSSCALLGSLDLGKW----IHKYAKKHSFCKYV 265
Query: 248 ---NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
+LI M+++CGS+++A IF++M +D +++ +I A+HG + + + +M+ +
Sbjct: 266 KVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE 325
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEE 359
++PD IT++G+L ACSH G +EEG+K F + VP + HY M+D+L R G LE+
Sbjct: 326 NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 360 AMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
A + I +P+ P ++ LL A H ++L E + ++F ++ + +YV+LSN+YA
Sbjct: 386 AYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYAR 445
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+W+ V ++R +M+ + K+ S +E + VH
Sbjct: 446 NKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVH 480
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 155/304 (50%), Gaps = 39/304 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
NV T++ Y + ++ +AR FD++ E VV +NAM++GYA+ E + LF +M
Sbjct: 163 NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+P+E T ++V+SSC+ LG L + I + K F V TAL+DM AKCG+L
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLD 282
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A IF+++ Y+++ + +AMI A YA +G
Sbjct: 283 DAVSIFEKMR-YKDTQAWSAMIVA-------------------------------YANHG 310
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQIKLSILG 246
++ ++ +F+ M S N +PDE+T + + +AC H G + G + +++++ I SI
Sbjct: 311 KAEKSMLMFERMRSEN-VQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKH 369
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
Y S++ + SR G++E+A ++ + + + L++ +SH + + L K+ E
Sbjct: 370 YGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNN----LDLAEKVSERI 425
Query: 306 IEPD 309
E D
Sbjct: 426 FELD 429
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 238/458 (51%), Gaps = 38/458 (8%)
Query: 1 MMGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETV 60
++G NV + +V Y K G + A++ D++ E+ VV A++ GY+Q G E V
Sbjct: 193 ILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAV 252
Query: 61 RLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
+ F ML +P+E T+ +V+ SC +L D + I + K F S +T+LL M+
Sbjct: 253 KAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMY 312
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
+C + + +F + + P + VSW S+I
Sbjct: 313 LRCSLVDDSLRVFKCI------------------------------EYP--NQVSWTSLI 340
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
+G QNG MA+ F++M+ + KP+ T+ S C +L G I+ +Y
Sbjct: 341 SGLVQNGREEMALIEFRKMMR-DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF 399
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
+ LI +Y +CG + A L+F ++ D++S NT+I A +G G E + L +
Sbjct: 400 DRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFER 459
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDV----DHYACMIDMLGRVGK 356
M G++P+ +T + +L AC+++ L+EEG ++F+S + + DHYACM+D+LGR G+
Sbjct: 460 MINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGR 519
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
LEEA +++ + + P ++ +LL+A ++H++VE+ E K+ +EP + +L+SN+
Sbjct: 520 LEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNL 578
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
YA G+W V +++ M+ +KK A SWVE H
Sbjct: 579 YASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETH 616
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 170/355 (47%), Gaps = 46/355 (12%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
++ + +V K G++ AR FD M ER +V+WN++++ + + E V ++ M+++
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 70 GNEPDETTWVTVISSCSSLGDPCLAE-----SIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
PDE T +V + S L A+ +++ L+ SN FV +AL+DM+ K G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEV----SNVFVGSALVDMYVKFG 215
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ A+ + D ++ E+D V ++I GY+
Sbjct: 216 KTREAKLVLD--------------------------------RVEEKDVVLITALIVGYS 243
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
Q GE A+K F+ M+ +P+E T SV +CG+L + G ++ + + ++
Sbjct: 244 QKGEDTEAVKAFQSML-VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESAL 302
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
SL+ MY RC ++++ +F+ + + VS+ +LISGL +G + KM D
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD 362
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP--DVDHYA--CMIDMLGRVG 355
I+P+ T L CS+ + EEG+++ + D D YA +ID+ G+ G
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG 417
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 229/452 (50%), Gaps = 49/452 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N + +V+ Y K G + +R +MP R VV+WNA++ GYA+ + + F M
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTAL-LDMHAKCGNL 126
G + T V+V+S+C GD L++ K Y V D H K
Sbjct: 456 VEGVSSNYITVVSVLSACLLPGDL---------LERGKPLHAYIVSAGFESDEHVK---- 502
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
N++I+ YA+ GDLS ++DLFN + R+ ++WN+M+A A +
Sbjct: 503 -------------------NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 543
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G +KL +M S S D+ + SA L L G L+ +KL
Sbjct: 544 GHGEEVLKLVSKMRSFGVS-LDQFSFSEGLSAAAKLAVLEEG----QQLHGLAVKLG-FE 597
Query: 247 YNSLIF-----MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
++S IF MYS+CG + E + R L S+N LIS L HG+ E +M
Sbjct: 598 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 657
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGK 356
E GI+P +T++ +LTACSH GL+++G ++ I P ++H C+ID+LGR G+
Sbjct: 658 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 717
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
L EA I MPM+P+ ++ SLL + +IH ++ G AA L +EP + S YVL SN+
Sbjct: 718 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 777
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
+A GRW++V NVR M + +KK A SWV+
Sbjct: 778 FATTGRWEDVENVRKQMGFKNIKKKQACSWVK 809
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 184/365 (50%), Gaps = 46/365 (12%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
V T++ YA +G A + F +MP + ++SWN++++ + G +L+ + L M+S
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
SG + T+ + +++C F ++F K +L
Sbjct: 356 SGKSVNYVTFTSALAAC--------------------FTPDFFEKGRIL----------- 384
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
+ G++ N + NA++S Y ++G++S +R + +MP RD V+WN++I GYA++ +
Sbjct: 385 -HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSL-----SLGIWAVSILNEYQIKLS 243
A+ F+ M + +T+VSV SAC G L L + VS E +
Sbjct: 444 PDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 502
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
NSLI MY++CG + + +F + R+++++N +++ A HGHG E +KL+SKM+
Sbjct: 503 ----NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 558
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH----YACMIDMLGRVGKLEE 359
G+ D+ ++ L+A + +LEEGQ++ +H + DM + G++ E
Sbjct: 559 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 618
Query: 360 AMKLI 364
+K++
Sbjct: 619 VVKML 623
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 177/365 (48%), Gaps = 37/365 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V T ++ Y G + +R F++MP+R+VVSW +++ GY+ G E + ++ M
Sbjct: 93 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 152
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
G +E + VISSC L D L I+ ++ K S V+
Sbjct: 153 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE-------------- 198
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
N++IS +G++ +A +F++M ERDT+SWNS+ A YAQNG
Sbjct: 199 ------------------NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+ ++F M +D + + T+ ++ S GH+ G ++ + +
Sbjct: 241 HIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N+L+ MY+ G EA L+F++M T+DL+S+N+L++ + G ++ + L+ M G
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYA----CMIDMLGRVGKLEEAMKL 363
+ +T+ L AC E+G+ + + V + + ++ M G++G++ E+ ++
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 364 IHSMP 368
+ MP
Sbjct: 420 LLQMP 424
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 165/354 (46%), Gaps = 36/354 (10%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y K G +K AR FD MP R+ VSWN M+SG + G LE + F M G +P
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
+++++C G S+ R + V+ H + K+ LL ++ + I GV
Sbjct: 62 ASLVTACGRSG------SMFR--EGVQVH-GFVAKSGLLS------DVYVSTAILHLYGV 106
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
Y G +S +R +F +MP+R+ VSW S++ GY+ GE I ++K
Sbjct: 107 Y----------------GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKG 150
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCG 258
M +E +M V S+CG L SLG + + + ++ + NSLI M G
Sbjct: 151 M-RGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 209
Query: 259 SMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILT 318
+++ A IF +M+ RD +S+N++ + A +GH E ++ S M+ E + T +L+
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 269
Query: 319 ACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRV----GKLEEAMKLIHSMP 368
H + G+ + + D C+ + L R+ G+ EA + MP
Sbjct: 270 VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MY++ G ++ A +F M R+ VS+NT++SG+ G +E ++ KM + GI+P
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 313 YIGILTACSHAG-LLEEGQKVF----ESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++TAC +G + EG +V +S + DV ++ + G G + + K+ M
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 368 P 368
P
Sbjct: 121 P 121
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/452 (33%), Positives = 229/452 (50%), Gaps = 49/452 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N + +V+ Y K G + +R +MP R VV+WNA++ GYA+ + + F M
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTAL-LDMHAKCGNL 126
G + T V+V+S+C GD L++ K Y V D H K
Sbjct: 439 VEGVSSNYITVVSVLSACLLPGDL---------LERGKPLHAYIVSAGFESDEHVK---- 485
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
N++I+ YA+ GDLS ++DLFN + R+ ++WN+M+A A +
Sbjct: 486 -------------------NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 526
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G +KL +M S S D+ + SA L L G L+ +KL
Sbjct: 527 GHGEEVLKLVSKMRSFGVS-LDQFSFSEGLSAAAKLAVLEEG----QQLHGLAVKLG-FE 580
Query: 247 YNSLIF-----MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
++S IF MYS+CG + E + R L S+N LIS L HG+ E +M
Sbjct: 581 HDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 640
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGK 356
E GI+P +T++ +LTACSH GL+++G ++ I P ++H C+ID+LGR G+
Sbjct: 641 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 700
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
L EA I MPM+P+ ++ SLL + +IH ++ G AA L +EP + S YVL SN+
Sbjct: 701 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 760
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
+A GRW++V NVR M + +KK A SWV+
Sbjct: 761 FATTGRWEDVENVRKQMGFKNIKKKQACSWVK 792
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 184/365 (50%), Gaps = 46/365 (12%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
V T++ YA +G A + F +MP + ++SWN++++ + G +L+ + L M+S
Sbjct: 279 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 338
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
SG + T+ + +++C F ++F K +L
Sbjct: 339 SGKSVNYVTFTSALAAC--------------------FTPDFFEKGRIL----------- 367
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
+ G++ N + NA++S Y ++G++S +R + +MP RD V+WN++I GYA++ +
Sbjct: 368 -HGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSL-----SLGIWAVSILNEYQIKLS 243
A+ F+ M + +T+VSV SAC G L L + VS E +
Sbjct: 427 PDKALAAFQTM-RVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVK 485
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
NSLI MY++CG + + +F + R+++++N +++ A HGHG E +KL+SKM+
Sbjct: 486 ----NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRS 541
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH----YACMIDMLGRVGKLEE 359
G+ D+ ++ L+A + +LEEGQ++ +H + DM + G++ E
Sbjct: 542 FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGE 601
Query: 360 AMKLI 364
+K++
Sbjct: 602 VVKML 606
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 177/365 (48%), Gaps = 37/365 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V T ++ Y G + +R F++MP+R+VVSW +++ GY+ G E + ++ M
Sbjct: 76 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 135
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
G +E + VISSC L D L I+ ++ K S V+
Sbjct: 136 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE-------------- 181
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
N++IS +G++ +A +F++M ERDT+SWNS+ A YAQNG
Sbjct: 182 ------------------NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 223
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+ ++F M +D + + T+ ++ S GH+ G ++ + +
Sbjct: 224 HIEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N+L+ MY+ G EA L+F++M T+DL+S+N+L++ + G ++ + L+ M G
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYA----CMIDMLGRVGKLEEAMKL 363
+ +T+ L AC E+G+ + + V + + ++ M G++G++ E+ ++
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 364 IHSMP 368
+ MP
Sbjct: 403 LLQMP 407
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 36/338 (10%)
Query: 35 MPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLA 94
MP R+ VSWN M+SG + G LE + F M G +P +++++C G
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG----- 55
Query: 95 ESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYAR 154
S+ R + V+ H + K+ LL ++ + I GVY
Sbjct: 56 -SMFR--EGVQVH-GFVAKSGLLS------DVYVSTAILHLYGVY--------------- 90
Query: 155 LGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVS 214
G +S +R +F +MP+R+ VSW S++ GY+ GE I ++K M +E +M
Sbjct: 91 -GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGM-RGEGVGCNENSMSL 148
Query: 215 VFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRD 274
V S+CG L SLG + + + ++ + NSLI M G+++ A IF +M+ RD
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 208
Query: 275 LVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFE 334
+S+N++ + A +GH E ++ S M+ E + T +L+ H + G+ +
Sbjct: 209 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 268
Query: 335 SIKVPDVDHYACMIDMLGRV----GKLEEAMKLIHSMP 368
+ D C+ + L R+ G+ EA + MP
Sbjct: 269 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 239/457 (52%), Gaps = 41/457 (8%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+ T +V Y K + TAR FD+M E +VVSW +++SGY G + +F M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 68 SSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
P+E T+ +V +CS+L + + ++I +L+ N V ++L+DM+ KC ++
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 127 KAAQEIFDQL-GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+ A+ +FD + G RN VS +MI+A YAQ
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITA-------------------------------YAQ 211
Query: 186 NGESLMAIKLFKEM-ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
N AI+LF+ + + ++ + SV SAC LG L G A ++ + +
Sbjct: 212 NARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNT 271
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
+ SL+ MY++CGS+ A IF + ++SY ++I A HG G +KL +M
Sbjct: 272 VVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAG 331
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEE 359
I P+ +T +G+L ACSH+GL+ EG + + VPD HY C++DMLGR G+++E
Sbjct: 332 RINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDE 391
Query: 360 AMKLIHSMPM--EPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIY 417
A +L ++ + E A ++G+LL+A R+H +VE+ A+ +L +S Y+ LSN Y
Sbjct: 392 AYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAY 451
Query: 418 ALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
A++G W++ ++R M++ G K A SW+E+ V+
Sbjct: 452 AVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVY 488
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 174/351 (49%), Gaps = 45/351 (12%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP--ERSVVSWNAMLSGYAQSG---AALETV 60
+RN+V +++V Y K +++TAR FD M R+VVSW +M++ YAQ+ A+E
Sbjct: 163 RRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELF 222
Query: 61 RLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
R FN L+S + ++ +VIS+CSSLG + + + + SN V T+LLDM+
Sbjct: 223 RSFNAALTS-DRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMY 281
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
AKCG+L A++IF + + C+++I S+ SMI
Sbjct: 282 AKCGSLSCAEKIFLR-------IRCHSVI-------------------------SYTSMI 309
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQ 239
A++G A+KLF EM++ + P+ +T++ V AC H G ++ G+ +S++ E Y
Sbjct: 310 MAKAKHGLGEAAVKLFDEMVAGRIN-PNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYG 368
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEM---ATRDLVSYNTLISGLASHGHGIECIK 296
+ Y ++ M R G ++EA + + + A + + + L+S HG +E +
Sbjct: 369 VVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGR-VEIVS 427
Query: 297 LISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV-FESIKVPDVDHYAC 346
SK + YI + A + +G E+ + + E + +V AC
Sbjct: 428 EASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERAC 478
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 146/295 (49%), Gaps = 27/295 (9%)
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
+LG ++ + N ++ +Y +L +++ AR LF++M E + VSW S+I+GY G+ A+
Sbjct: 57 KLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALS 116
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
+F++M P+E T SVF AC L +G + L ++ +I+ +SL+ MY
Sbjct: 117 MFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMY 176
Query: 255 SRCGSMEEATLIFQEMA--TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
+C +E A +F M R++VS+ ++I+ A + G E I+L + DR
Sbjct: 177 GKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNA-ALTSDRAN 235
Query: 313 YI---GILTACSHAGLLEEGQKV--------FESIKVPDVDHYACMIDMLGRVGKLEEAM 361
+++ACS G L+ G+ +ES V ++DM + G L A
Sbjct: 236 QFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATS----LLDMYAKCGSLSCAE 291
Query: 362 KLIHSMPMEPHAGI-YGSLLNATRIHKQVELGELAAAKLFT--VEPHNSSNYVLL 413
K+ + + H+ I Y S++ A H LGE AA KLF V + NYV L
Sbjct: 292 KIF--LRIRCHSVISYTSMIMAKAKHG---LGE-AAVKLFDEMVAGRINPNYVTL 340
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 97/193 (50%), Gaps = 10/193 (5%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G + N V T+++ YAK G+L A F ++ SV+S+ +M+ A+ G V+L
Sbjct: 265 GGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKL 324
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLG---DPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
F++M++ P+ T + V+ +CS G + S++ + V S ++ T ++DM
Sbjct: 325 FDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHY--TCVVDM 382
Query: 120 HAKCGNLKAAQEIFD--QLGVYRNSVSCNAMISA---YARLGDLSFARDLFNKMPERDTV 174
+ G + A E+ ++G + ++ A++SA + R+ +S A + ++ T
Sbjct: 383 LGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTS 442
Query: 175 SWNSMIAGYAQNG 187
++ ++ YA +G
Sbjct: 443 AYIALSNAYAVSG 455
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 235 bits (599), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 198/313 (63%), Gaps = 6/313 (1%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
++++ Y G++ A +F +MPER+ VSW +MI+G+AQ + +KL+ +M + S
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKST-S 217
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
P++ T ++ SAC G+L G +K + NSLI MY +CG +++A
Sbjct: 218 DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLIS-KMKEDGIEPDRITYIGILTACSHAG 324
IF + + +D+VS+N++I+G A HG ++ I+L M + G +PD ITY+G+L++C HAG
Sbjct: 278 IFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Query: 325 LLEEGQKVF----ESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLL 380
L++EG+K F E P+++HY+C++D+LGR G L+EA++LI +MPM+P++ I+GSLL
Sbjct: 338 LVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 381 NATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKK 440
+ R+H V G AA + +EP ++ +V L+N+YA G WKE VR +M+ +G+K
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKT 457
Query: 441 ITAWSWVEHPSHV 453
SW+E ++V
Sbjct: 458 NPGCSWIEINNYV 470
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 147/283 (51%), Gaps = 33/283 (11%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V +++V Y SG ++ A F++MPER+VVSW AM+SG+AQ ++L++ M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
S ++P++ T+ ++S+C+ G S+ + + S + +L+ M+ KCG+LK
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A IFDQ ++ VS N+MI AGYAQ+G
Sbjct: 274 DAFRIFDQFS-NKDVVSWNSMI-------------------------------AGYAQHG 301
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
++ AI+LF+ M+ + +KPD +T + V S+C H G + G +++ E+ +K + Y
Sbjct: 302 LAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY 361
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHG 289
+ L+ + R G ++EA + + M + + V + +L+ HG
Sbjct: 362 SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHG 404
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 146/454 (32%), Positives = 235/454 (51%), Gaps = 51/454 (11%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERS-VVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
+VT Y+K +++ A+ FD++P+R V WNA+++GY+Q + + +F+ M G
Sbjct: 201 LVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGV 260
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF 133
T +V+S+ + GD SI K S+ V AL+DM+ K L+ A I
Sbjct: 261 SRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSI- 319
Query: 134 DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAI 193
F M ERD +WNS++ + G+ +
Sbjct: 320 -------------------------------FEAMDERDLFTWNSVLCVHDYCGDHDGTL 348
Query: 194 KLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG------- 246
LF+ M+ + +PD +T+ +V CG L SL G ++ Y I +L
Sbjct: 349 ALFERMLCSG-IRPDIVTLTTVLPTCGRLASLRQG----REIHGYMIVSGLLNRKSSNEF 403
Query: 247 -YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
+NSL+ MY +CG + +A ++F M +D S+N +I+G G + + S M G
Sbjct: 404 IHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAG 463
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEA 360
++PD IT++G+L ACSH+G L EG+ ++ +P DHYAC+IDMLGR KLEEA
Sbjct: 464 VKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEA 523
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALA 420
+L S P+ + ++ S+L++ R+H +L +A +L +EP + YVL+SN+Y A
Sbjct: 524 YELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEA 583
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
G+++EV +VR+ MR+Q VKK SW+ + VH
Sbjct: 584 GKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVH 617
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 180/374 (48%), Gaps = 52/374 (13%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T++V YAK G ++ A + F ER V +NA++SG+ +G+ L+ + + +M ++G
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLD----KVKFHSNYFVKTALLDMHAKCGNLKA 128
PD+ T+ +++ G + S V+K+ K+ F S+ +V + L+ ++K +++
Sbjct: 159 PDKYTFPSLLK-----GSDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVED 213
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
AQ++FD+L +SV NA+++ Y+++ A +F+KM E
Sbjct: 214 AQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREE----------------- 256
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGS-LSLGIWAVSILNEYQIKLSILGY 247
+ + + I+ +++S F+ G + + S+ AV + I +S
Sbjct: 257 ---GVGVSRHTIT---------SVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS---- 300
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N+LI MY + +EEA IF+ M RDL ++N+++ G + L +M GI
Sbjct: 301 NALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIR 360
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH--------YACMIDMLGRVGKLEE 359
PD +T +L C L +G+++ + V + + + ++DM + G L +
Sbjct: 361 PDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRD 420
Query: 360 AMKLIHSMPMEPHA 373
A + SM ++ A
Sbjct: 421 ARMVFDSMRVKDSA 434
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 153/342 (44%), Gaps = 44/342 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++V ++ Y KS L+ A F+ M ER + +WN++L + G T+ LF ML
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 68 SSGNEPDETTWVTVISSCSSL-----GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
SG PD T TV+ +C L G IV L K SN F+ +L+DM+ K
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRK-SSNEFIHNSLMDMYVK 414
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CG+L+ A+ +FD + V ++S S N MI+ Y G
Sbjct: 415 CGDLRDARMVFDSMRV-KDSASWNIMINGY-----------------------------G 444
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEYQIK 241
GE +A+ +F M KPDE+T V + AC H G L+ G + + Y I
Sbjct: 445 VQSCGE--LALDMFSCMCRAG-VKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNIL 501
Query: 242 LSILGYNSLIFMYSRCGSMEEA-TLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
+ Y +I M R +EEA L + + V + +++S HG+ + + L++
Sbjct: 502 PTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGN--KDLALVAG 559
Query: 301 MKEDGIEPDRI-TYIGILTACSHAGLLEEGQKVFESIKVPDV 341
+ +EP+ Y+ + AG EE V ++++ +V
Sbjct: 560 KRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNV 601
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%)
Query: 1 MMGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETV 60
++ N +++ Y K G+L+ AR+ FD M + SWN M++GY +
Sbjct: 394 LLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELAL 453
Query: 61 RLFNDMLSSGNEPDETTWVTVISSCSSLG 89
+F+ M +G +PDE T+V ++ +CS G
Sbjct: 454 DMFSCMCRAGVKPDEITFVGLLQACSHSG 482
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 246/452 (54%), Gaps = 14/452 (3%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ V T++V+ Y++ G A F+K+P +SVV++NA +SG ++G +FN
Sbjct: 161 EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNL 220
Query: 66 MLS-SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M S EP++ T+V I++C+SL + + + K +F V TAL+DM++KC
Sbjct: 221 MRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCR 280
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMI 180
K+A +F +L RN +S N++IS G A +LF K+ D+ +WNS+I
Sbjct: 281 CWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLI 340
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
+G++Q G+ + A K F+ M+S P + S+ SAC + +L G + +
Sbjct: 341 SGFSQLGKVIEAFKFFERMLSVV-MVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAA 399
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQ--EMATRDLVSYNTLISGLASHGHGIECIKLI 298
+ I SLI MY +CG A IF E +D V +N +ISG HG I++
Sbjct: 400 ERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIF 459
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGR 353
++E+ +EP T+ +L+ACSH G +E+G ++F ++ P +H CMID+LGR
Sbjct: 460 ELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGR 519
Query: 354 VGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLL 413
G+L EA ++I M + +Y SLL + R H LGE AA KL +EP N + +V+L
Sbjct: 520 SGRLREAKEVIDQMSEP-SSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVIL 578
Query: 414 SNIYALAGRWKEVGNVRNIMRKQGVKKITAWS 445
S+IYA RW++V ++R ++ ++ + K+ S
Sbjct: 579 SSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 165/346 (47%), Gaps = 37/346 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V T T +V+ Y K + A D+MPER + S NA +SG ++G + R+F D
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDAR 124
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SG+ + T +V+ C + M C +K
Sbjct: 125 VSGSGMNSVTVASVLGGCGDIEG---------------------------GMQLHCLAMK 157
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+ E+ +G +++S Y+R G+ A +F K+P + V++N+ I+G +NG
Sbjct: 158 SGFEMEVYVG--------TSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+ +F M + +P+++T V+ +AC L +L G ++ + + + +
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 248 NSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
+LI MYS+C + A ++F E+ TR+L+S+N++ISG+ +G ++L K+ +G+
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFES-IKVPDVDHYACMIDML 351
+PD T+ +++ S G + E K FE + V V C+ +L
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLL 375
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 237/447 (53%), Gaps = 42/447 (9%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ YAK G++ TAR F+ M + VSWN+++SGY QSG +E ++LF M+ + D
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
T++ +IS + L D + + HSN +D+
Sbjct: 408 HITYLMLISVSTRLADLKFGKGL---------HSNGIKSGICIDL--------------- 443
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
SVS NA+I YA+ G++ + +F+ M DTV+WN++I+ + G+ ++
Sbjct: 444 -------SVS-NALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIF 252
+ +M ++ PD T + C L + LG I + Y+ +L I N+LI
Sbjct: 496 VTTQM-RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI--GNALIE 552
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MYS+CG +E ++ +F+ M+ RD+V++ +I +G G + ++ + M++ GI PD +
Sbjct: 553 MYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 313 YIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
+I I+ ACSH+GL++EG FE +K P ++HYAC++D+L R K+ +A + I +M
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVG 427
P++P A I+ S+L A R +E E + ++ + P + +L SN YA +W +V
Sbjct: 673 PIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVS 732
Query: 428 NVRNIMRKQGVKKITAWSWVEHPSHVH 454
+R ++ + + K +SW+E +VH
Sbjct: 733 LIRKSLKDKHITKNPGYSWIEVGKNVH 759
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 191/406 (47%), Gaps = 44/406 (10%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ ++ +V Y++ G L AR FD+MP R +VSWN+++SGY+ G E + ++++
Sbjct: 138 ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
+ +S PD T +V+ P +V K + +H
Sbjct: 198 LKNSWIVPDSFTVSSVL--------PAFGNLLVVKQGQ--------------GLHGFA-- 233
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
LK+ V N +++ Y + + AR +F++M RD+VS+N+MI GY +
Sbjct: 234 LKSGVNS--------VVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLK 285
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
++++F E + + KPD LT+ SV ACGHL LSL + + + + L
Sbjct: 286 LEMVEESVRMFLE--NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
N LI +Y++CG M A +F M +D VS+N++ISG G +E +KL M
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKV----FESIKVPDVDHYACMIDMLGRVGKLEEAM 361
+ D ITY+ +++ + L+ G+ + +S D+ +IDM + G++ +++
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSL 463
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNS 407
K+ SM G ++ T I V G+ A T + S
Sbjct: 464 KIFSSM------GTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 232/432 (53%), Gaps = 39/432 (9%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPER-SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
++++ Y K L A F ++ E + +WN ML GY + ++ + LF + + G E
Sbjct: 371 SLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIE 430
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
D + +VISSCS +G L +S+ Y VKT+L D+
Sbjct: 431 IDSASATSVISSCSHIGAVLLGKSL----------HCYVVKTSL-DLTISV--------- 470
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
N++I Y ++GDL+ A +F + + + ++WN+MIA Y +S A
Sbjct: 471 ------------VNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKA 517
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
I LF M+S N KP +T+V++ AC + GSL G + E + ++++ +LI
Sbjct: 518 IALFDRMVSEN-FKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALID 576
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MY++CG +E++ +F +D V +N +ISG HG I L +M+E ++P T
Sbjct: 577 MYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPT 636
Query: 313 YIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
++ +L+AC+HAGL+E+G+K+F + P++ HY+C++D+L R G LEEA + SMP
Sbjct: 637 FLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696
Query: 369 MEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGN 428
P I+G+LL++ H + E+G A + +P N Y++L+N+Y+ AG+W+E
Sbjct: 697 FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAER 756
Query: 429 VRNIMRKQGVKK 440
R +MR+ GV K
Sbjct: 757 AREMMRESGVGK 768
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 38/320 (11%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G N+ + +++ YA G + F + R + WN+++ + +G ++
Sbjct: 53 GGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCF 112
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F ML SG PD T V+S+C+ L + FH FV +L H
Sbjct: 113 FFSMLLSGQSPDHFTAPMVVSACAEL---------------LWFHVGTFVHGLVLK-HG- 155
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
G RN+ + + Y++ G L A +F++MP+RD V+W ++I+G
Sbjct: 156 --------------GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISG 201
Query: 183 YAQNGESLMAIKLFKEMIS--TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
+ QNGES + +M S ++ KP+ T+ F AC +LG+L G + +
Sbjct: 202 HVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGL 261
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
S +S+ YS+ G+ EA L F+E+ D+ S+ ++I+ LA G E + +
Sbjct: 262 ASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWE 321
Query: 301 MKEDGIEPDRITYIGILTAC 320
M+ G+ PD G++ +C
Sbjct: 322 MQNKGMHPD-----GVVISC 336
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 166/374 (44%), Gaps = 49/374 (13%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G RN + V Y+K G L+ A + FD+MP+R VV+W A++SG+ Q+G + +
Sbjct: 155 GGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGY 214
Query: 63 FNDMLSSG---NEPDETTWVTVISSCSSLG----DPCLAESIVRKLDKVKFHSNYFVKTA 115
M S+G ++P+ T +CS+LG CL V+ S+ FV+++
Sbjct: 215 LCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN----GLASSKFVQSS 270
Query: 116 LLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVS 175
+ ++K GN A F +LG + S ++I++ AR GD+ + D+F +M +
Sbjct: 271 MFSFYSKSGNPSEAYLSFRELG-DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM-- 327
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL 235
PD + + + + G + + G +
Sbjct: 328 ------------------------------HPDGVVISCLINELGKMMLVPQGKAFHGFV 357
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIEC 294
+ L NSL+ MY + + A +F ++ + ++NT++ G ++C
Sbjct: 358 IRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKC 417
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH----YACMIDM 350
I+L K++ GIE D + ++++CSH G + G+ + + +D +ID+
Sbjct: 418 IELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDL 477
Query: 351 LGRVGKLEEAMKLI 364
G++G L A ++
Sbjct: 478 YGKMGDLTVAWRMF 491
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 99/202 (49%), Gaps = 13/202 (6%)
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
G+ N + +IS+YA G + + +F+ + RD WNS+I + NG+ ++ F
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 197 KEMISTNDSKPDELTMVSVFSACG-----HLGSLSLGIWAVSILNEYQIKLSILGYNSLI 251
M+ + S PD T V SAC H+G+ G+ +L + S +
Sbjct: 114 FSMLLSGQS-PDHFTAPMVVSACAELLWFHVGTFVHGL----VLKHGGFDRNTAVGASFV 168
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE---P 308
+ YS+CG +++A L+F EM RD+V++ +ISG +G + + KM G + P
Sbjct: 169 YFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKP 228
Query: 309 DRITYIGILTACSHAGLLEEGQ 330
+ T ACS+ G L+EG+
Sbjct: 229 NPRTLECGFQACSNLGALKEGR 250
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
E + N+ ++ YAK G+L+ +R FD ++ V WN M+SGY G + LF
Sbjct: 563 EHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALF 622
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+ M S +P T++ ++S+C+ G + + K+ + N + L+D+ ++
Sbjct: 623 DQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRS 682
Query: 124 GNLKAAQ 130
GNL+ A+
Sbjct: 683 GNLEEAE 689
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/461 (29%), Positives = 229/461 (49%), Gaps = 52/461 (11%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
Q N + ++ YAK G L TA + + VVSW M++GY Q + + F
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
ML G DE +S+C+ L
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQ-----------------------------------A 606
Query: 126 LKAAQEIFDQLGVYRNSVSC---NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
LK Q+I Q V S NA+++ Y+R G + + F + D ++WN++++G
Sbjct: 607 LKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSG 666
Query: 183 YAQNGESLMAIKLF----KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+ Q+G + A+++F +E I N+ T S A ++ G +++ +
Sbjct: 667 FQQSGNNEEALRVFVRMNREGIDNNN-----FTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
N+LI MY++CGS+ +A F E++T++ VS+N +I+ + HG G E +
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGR 353
+M + P+ +T +G+L+ACSH GL+++G FES+ P +HY C++DML R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 354 VGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLL 413
G L A + I MP++P A ++ +LL+A +HK +E+GE AA L +EP +S+ YVLL
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 414 SNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
SN+YA++ +W R M+++GVKK SW+E + +H
Sbjct: 902 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIH 942
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 205/466 (43%), Gaps = 74/466 (15%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y G+L A FD+MPER++ +WN M+ A E LF M+S P+E T+
Sbjct: 130 YLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTF 189
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
V+ +C +A +V ++ HA+ I Q G+
Sbjct: 190 SGVLEACRG---GSVAFDVVEQI------------------HAR---------ILYQ-GL 218
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
++V CN +I Y+R G + AR +F+ + +D SW +MI+G ++N AI+LF +
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCG 258
M P SV SAC + SL +G ++ + N+L+ +Y G
Sbjct: 279 MYVLG-IMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 259 SMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILT 318
++ A IF M+ RD V+YNTLI+GL+ G+G + ++L +M DG+EPD T ++
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 319 ACSHAGLLEEGQKV-----------------------------------FESIKVPDVDH 343
ACS G L GQ++ F +V +V
Sbjct: 398 ACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVL 457
Query: 344 YACMIDMLGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNATRIHKQVELGELAAAKLF 400
+ M+ G + L + ++ M +E P+ Y S+L +ELGE +++
Sbjct: 458 WNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII 517
Query: 401 TVEPH-NSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWS 445
N+ +L ++YA G+ ++ ++R G K + +W+
Sbjct: 518 KTNFQLNAYVCSVLIDMYAKLGKLDTAWDI--LIRFAG-KDVVSWT 560
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 162/350 (46%), Gaps = 37/350 (10%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+V+ Y GNL +A F M +R V++N +++G +Q G + + LF M G EPD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
T +++ +CS+ G + + K+ F SN ++ ALL+++AKC +++ A + F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
+ V N V N M+ AY L DL + +F +M + V
Sbjct: 449 ETEV-ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV-------------------- 487
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
P++ T S+ C LG L LG S + + +L+ + LI MY
Sbjct: 488 ------------PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
++ G ++ A I A +D+VS+ T+I+G + + + +M + GI D +
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLT 595
Query: 315 GILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEA 360
++AC+ L+EGQ++ V D+ ++ + R GK+EE+
Sbjct: 596 NAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 169/365 (46%), Gaps = 45/365 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+ V ++ Y+++G + AR FD + + SW AM+SG +++ E +RLF DM
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
G P + +V+S+C + + E + + K+ F S+ +V AL+ ++ GNL
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+A+ IF + R++V+ N +I+ G +Q G
Sbjct: 341 SAEHIFSNMS-QRDAVTYNTLIN-------------------------------GLSQCG 368
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
A++LFK M + +PD T+ S+ AC G+L G L+ Y KL
Sbjct: 369 YGEKAMELFKRM-HLDGLEPDSNTLASLVVACSADGTLFRG----QQLHAYTTKLGFASN 423
Query: 248 N----SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
N +L+ +Y++C +E A F E ++V +N ++ ++ +M+
Sbjct: 424 NKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 483
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPD--VDHYAC--MIDMLGRVGKLEE 359
+ I P++ TY IL C G LE G+++ I + ++ Y C +IDM ++GKL+
Sbjct: 484 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDT 543
Query: 360 AMKLI 364
A ++
Sbjct: 544 AWDIL 548
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 128/304 (42%), Gaps = 49/304 (16%)
Query: 124 GNLKAAQEIFDQ---LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
G+L +++ Q LG+ N + Y GDL A +F++MPER +WN MI
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA---VSILNE 237
A LF M+S N + P+E T V AC GS++ + IL
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVT-PNEGTFSGVLEAC-RGGSVAFDVVEQIHARIL-- 214
Query: 238 YQ-IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIK 296
YQ ++ S + N LI +YSR G ++ A +F + +D S+ +ISGL+ + E I+
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 297 LISKMKEDGIEPDRITYIGILTACS----------------------------------- 321
L M GI P + +L+AC
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 322 HAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPHAGIYGS 378
H G L + +F ++ D Y +I+ L + G E+AM+L M +EP + S
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 379 LLNA 382
L+ A
Sbjct: 395 LVVA 398
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/451 (31%), Positives = 241/451 (53%), Gaps = 53/451 (11%)
Query: 8 NVVTWTTMVTGYAKSGNL-KTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
NVV + +V Y+K +L T+ F MP R++ SWN ++ +++SG A +++ LF M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 67 L-SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
S PD+ T ++ +CS+ + + I K+ F S+ FV +AL+ M
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIM------ 178
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
Y +G L AR LF+ MP RD+V + +M GY Q
Sbjct: 179 --------------------------YVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQ 212
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI----WAVSILNEYQIK 241
GE+++ + +F+EM + D + MVS+ ACG LG+L G W + +
Sbjct: 213 QGEAMLGLAMFREM-GYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIR-------R 264
Query: 242 LSILGYN---SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
S LG N ++ MY +C ++ A +F M+ RD++S+++LI G G + KL
Sbjct: 265 CSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRV 354
+M ++GIEP+ +T++G+L+AC+H GL+E+ F ++ VP++ HYA + D + R
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRA 384
Query: 355 GKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLS 414
G LEEA K + MP++P + G++L+ +++ VE+GE A +L ++P +S YV L+
Sbjct: 385 GLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLA 444
Query: 415 NIYALAGRWKEVGNVRNIMRKQGVKKITAWS 445
+Y+ AGR+ E ++R M+++ + K+ S
Sbjct: 445 GLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 233 bits (593), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 236/443 (53%), Gaps = 50/443 (11%)
Query: 11 TWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSG 70
T T +++ YAK G A F+++P + V++NA+ GY Q G A + ++ +M G
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG 497
Query: 71 NEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
PD T V ++ +C+ D + ++ K F S V AL++M KC L AA
Sbjct: 498 VCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAI 557
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
+FD+ G E+ TVSWN M+ GY +G++
Sbjct: 558 VLFDKCGF-------------------------------EKSTVSWNIMMNGYLLHGQAE 586
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSL 250
A+ F++M +P+ +T V++ A L +L +G+ S L + NSL
Sbjct: 587 EAVATFRQM-KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSL 645
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
+ MY++CG +E + F E++ + +VS+NT++S A+HG + L M+E+ ++PD
Sbjct: 646 VDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDS 705
Query: 311 ITYIGILTACSHAGLLEEGQKVFESI----KV-PDVDHYACMIDMLGRVGKLEEAMKLIH 365
++++ +L+AC HAGL+EEG+++FE + K+ +V+HYACM+D+LG+ G EA++++
Sbjct: 706 VSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMR 765
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
M ++ G++G+LLN++R+H + L A +L +EP N S+Y + +
Sbjct: 766 RMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY----------SQDRR 815
Query: 426 VGNVRNIMRKQGVKKITAWSWVE 448
+G V N+ R +KK+ A SW+E
Sbjct: 816 LGEVNNVSR---IKKVPACSWIE 835
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 177/377 (46%), Gaps = 55/377 (14%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ +V T +V Y K+ +L +AR FDKM + VV+WN M+SG AQ+G + + LF+D
Sbjct: 132 ESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHD 191
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDP----CLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
M S + D + +I + S L CL +++K F S L+DM+
Sbjct: 192 MRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSS------GLIDMYC 245
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
C +L AA+ +F++ V+R +D SW +M+A
Sbjct: 246 NCADLYAAESVFEE--VWR------------------------------KDESSWGTMMA 273
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
YA NG ++LF +++ D + +++ S A ++G L GI +++Y ++
Sbjct: 274 AYAHNGFFEEVLELF-DLMRNYDVRMNKVAAASALQAAAYVGDLVKGI----AIHDYAVQ 328
Query: 242 LSILG----YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKL 297
++G SL+ MYS+CG +E A +F + RD+VS++ +I+ G E I L
Sbjct: 329 QGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISL 388
Query: 298 ISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVF-ESIKV---PDVDHYACMIDMLGR 353
M I+P+ +T +L C+ G+ + +IK +++ +I M +
Sbjct: 389 FRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAK 448
Query: 354 VGKLEEAMKLIHSMPME 370
G+ A+K +P++
Sbjct: 449 CGRFSPALKAFERLPIK 465
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/494 (22%), Positives = 208/494 (42%), Gaps = 86/494 (17%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V T++++ Y+K G L+ A F + +R VVSW+AM++ Y Q+G E + LF DM+
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+P+ T +V+ C+ + L +SI K S TA++ M+AKCG
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFS 453
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A + F++L + +++V+ NA+ Y ++GD + A D++ M
Sbjct: 454 PALKAFERLPI-KDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC------------- 499
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
PD TMV + C + G + ++
Sbjct: 500 -------------------PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVA 540
Query: 248 NSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
++LI M+++C ++ A ++F + + VS+N +++G HG E + +MK +
Sbjct: 541 HALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKF 600
Query: 307 EPDRITYIGILTA----------------------CSH-------------AGLLEEGQK 331
+P+ +T++ I+ A CS G++E +K
Sbjct: 601 QPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEK 660
Query: 332 VFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNATRIHKQ 388
F I + + M+ G A+ L SM ++P + + S+L+A R
Sbjct: 661 CFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGL 720
Query: 389 VELGELAAAKLFTV--EPHN----SSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVK-KI 441
VE G+ ++F E H +Y + ++ AG + G +MR+ VK +
Sbjct: 721 VEEGK----RIFEEMGERHKIEAEVEHYACMVDLLGKAGLF---GEAVEMMRRMRVKTSV 773
Query: 442 TAWSWVEHPSHVHC 455
W + + S +HC
Sbjct: 774 GVWGALLNSSRMHC 787
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 198/456 (43%), Gaps = 89/456 (19%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML-SSGNEP 73
++ Y+ +R+ FD + + VV WN+M+ GY ++G E + F M G +P
Sbjct: 39 LINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDP 98
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF 133
D+ ++ + +C+ D I + ++ S+ ++ TAL++M+ K +L +A+++F
Sbjct: 99 DKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVF 158
Query: 134 DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAI 193
D++ V ++ V+ N M+S G AQNG S A+
Sbjct: 159 DKMHV-KDVVTWNTMVS-------------------------------GLAQNGCSSAAL 186
Query: 194 KLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS-ILGYNS-LI 251
LF +M S D +++ ++ A L + L+ IK I ++S LI
Sbjct: 187 LLFHDMRSCC-VDIDHVSLYNLIPAVSKLEKSDV----CRCLHGLVIKKGFIFAFSSGLI 241
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
MY C + A +F+E+ +D S+ T+++ A +G E ++L M+ + +++
Sbjct: 242 DMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKV 301
Query: 312 ---------TYIG--------------------------ILTACSHAGLLEEGQKVFESI 336
Y+G +++ S G LE +++F +I
Sbjct: 302 AAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINI 361
Query: 337 KVPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPHAGIYGSLLN------ATRIHK 387
+ DV ++ MI + G+ +EA+ L M ++P+A S+L A+R+ K
Sbjct: 362 EDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGK 421
Query: 388 QVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRW 423
+ + A +E + ++S +YA GR+
Sbjct: 422 SIHCYAIKA----DIESELETATAVIS-MYAKCGRF 452
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 114 TALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDT 173
T LL M +C N + ++ L + N +I+AY+ +R +F+ + +
Sbjct: 6 TNLLLMLRECKNFRCLLQVHGSL-IVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGV 64
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVS 233
V WNSMI GY + G A+ F M PD+ + AC G+
Sbjct: 65 VLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD 124
Query: 234 ILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIE 293
++ E ++ + +L+ MY + + A +F +M +D+V++NT++SGLA +G
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 294 CIKLISKMKEDGIEPDRITYIGILTACS 321
+ L M+ ++ D ++ ++ A S
Sbjct: 185 ALLLFHDMRSCCVDIDHVSLYNLIPAVS 212
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/315 (36%), Positives = 193/315 (61%), Gaps = 10/315 (3%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N +I + ++G+ A+ + +++ ++WN MI GY +N + A+K K M+S D
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
KP++ + S +AC LG L W S++ + I+L+ + ++L+ +Y++CG + +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGL 325
+F + D+ +N +I+G A+HG E I++ S+M+ + + PD IT++G+LT CSH GL
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 326 LEEGQKVFE------SIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSL 379
LEEG++ F SI+ P ++HY M+D+LGR G+++EA +LI SMP+EP I+ SL
Sbjct: 282 LEEGKEYFGLMSRRFSIQ-PKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSL 340
Query: 380 LNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVK 439
L+++R +K ELGE+A L + S +YVLLSNIY+ +W+ VR +M K+G++
Sbjct: 341 LSSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGIR 397
Query: 440 KITAWSWVEHPSHVH 454
K SW+E +H
Sbjct: 398 KAKGKSWLEFGGMIH 412
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 134/272 (49%), Gaps = 36/272 (13%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN-EP 73
++ K G A+ +++V++WN M+ GY ++ E ++ +MLS + +P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF 133
++ ++ + +++C+ LGD H +V + ++D
Sbjct: 164 NKFSFASSLAACARLGD---------------LHHAKWVHSLMIDS-------------- 194
Query: 134 DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAI 193
G+ N++ +A++ YA+ GD+ +R++F + D WN+MI G+A +G + AI
Sbjct: 195 ---GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAI 251
Query: 194 KLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN-EYQIKLSILGYNSLIF 252
++F EM + + S PD +T + + + C H G L G +++ + I+ + Y +++
Sbjct: 252 RVFSEMEAEHVS-PDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVD 310
Query: 253 MYSRCGSMEEATLIFQEMATR-DLVSYNTLIS 283
+ R G ++EA + + M D+V + +L+S
Sbjct: 311 LLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 42/180 (23%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N + + +V YAK G++ T+R F + V WNAM++G+A G A E +R+F++M
Sbjct: 199 NAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 258
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ PD T++ ++++CS CG L+
Sbjct: 259 AEHVSPDSITFLGLLTTCS-----------------------------------HCGLLE 283
Query: 128 AAQEIFDQLGVYRNSVSCN-----AMISAYARLGDLSFARDLFNKMP-ERDTVSWNSMIA 181
+E F L R S+ AM+ R G + A +L MP E D V W S+++
Sbjct: 284 EGKEYFG-LMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 231 bits (590), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 141/445 (31%), Positives = 241/445 (54%), Gaps = 44/445 (9%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G N++ + +++ YA+ G ++ AR+ FD M ER +VSWNAM+ GY + A + L
Sbjct: 142 GNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSL 201
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F ML+ G +PD C + G A +V+ L+ V ++H
Sbjct: 202 FQLMLTEGKKPD----------CFTFGSLLRASIVVKCLEIVS------------ELHG- 238
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
+ +LG R+S ++++AY + G L+ A L +RD +S ++I G
Sbjct: 239 ---------LAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITG 289
Query: 183 YAQ-NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI-LNEYQI 240
++Q N + A +FK+MI +K DE+ + S+ C + S+++G L QI
Sbjct: 290 FSQQNNCTSDAFDIFKDMIRMK-TKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQI 348
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
+ + NSLI MY++ G +E+A L F+EM +D+ S+ +LI+G HG+ + I L ++
Sbjct: 349 RFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNR 408
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFES------IKVPDVDHYACMIDMLGRV 354
M+ + I+P+ +T++ +L+ACSH G E G K++++ I+ + +H +C+IDML R
Sbjct: 409 MEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEARE-EHLSCIIDMLARS 467
Query: 355 GKLEEAMKLIHSMP--MEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVL 412
G LEEA LI S + + +G+ L+A R H V+L ++AA +L ++EP NY+
Sbjct: 468 GYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYIN 527
Query: 413 LSNIYALAGRWKEVGNVRNIMRKQG 437
L+++YA G W N R +M++ G
Sbjct: 528 LASVYAANGAWDNALNTRKLMKESG 552
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 185/427 (43%), Gaps = 91/427 (21%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ Y K G++K AR FD++ +R VVSW AM+S +++ G + + LF +M + +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 75 ETTWVTVISSCSSLGDPCLAE--SIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
+ T+ +V+ SC LG CL E I ++K N V++ALL ++A+CG ++ A+
Sbjct: 113 QFTYGSVLKSCKDLG--CLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQ 170
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
FD + ERD VSWN+MI GY N + +
Sbjct: 171 FDSM--------------------------------KERDLVSWNAMIDGYTANACADTS 198
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL----SILGYN 248
LF+ M+ T KPD T S+ A + L + VS L+ IKL S
Sbjct: 199 FSLFQLML-TEGKKPDCFTFGSLLRASIVVKCLEI----VSELHGLAIKLGFGRSSALIR 253
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGH----GIECIKLISKMKED 304
SL+ Y +CGS+ A + + RDL+S LI+G + + + K + +MK
Sbjct: 254 SLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMK-- 311
Query: 305 GIEPDRITYIGILTACS------------------------------------HAGLLEE 328
+ D + +L C+ +G +E+
Sbjct: 312 -TKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIED 370
Query: 329 GQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNATRI 385
FE +K DV + +I GR G E+A+ L + M E P+ + SLL+A
Sbjct: 371 AVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSH 430
Query: 386 HKQVELG 392
Q ELG
Sbjct: 431 TGQTELG 437
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
+ +I Y + GD+ AR LF+++ +RD VSW +MI+ +++ G A+ LFKEM D
Sbjct: 51 DMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEM-HREDV 109
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
K ++ T SV +C LG L G+ + + +++ ++L+ +Y+RCG MEEA L
Sbjct: 110 KANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARL 169
Query: 266 IFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTA 319
F M RDLVS+N +I G ++ L M +G +PD T+ +L A
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRA 223
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 231 bits (590), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/302 (39%), Positives = 180/302 (59%), Gaps = 12/302 (3%)
Query: 147 AMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE---SLMAIKLFKEMISTN 203
A++ YA G L AR LF ++ E D +WN+++A YA + E + LF M
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRM---- 210
Query: 204 DSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEA 263
+P+EL++V++ +C +LG G+WA + + + L+ SLI +YS+CG + A
Sbjct: 211 QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFA 270
Query: 264 TLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHA 323
+F EM+ RD+ YN +I GLA HG G E I+L + G+ PD T++ ++ACSH+
Sbjct: 271 RKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHS 330
Query: 324 GLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGS 378
GL++EG ++F S+K P V+HY C++D+LGR G+LEEA + I MP++P+A ++ S
Sbjct: 331 GLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRS 390
Query: 379 LLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGV 438
L +++ H E GE+A L +E NS NYVLLSNIYA RW +V R +M+ V
Sbjct: 391 FLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRV 450
Query: 439 KK 440
K
Sbjct: 451 NK 452
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 41/280 (14%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQS---GAALETVRLFNDMLSSGN 71
+V YA G L+ AR F+++ E + +WN +L+ YA S + E + LF M
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQV--- 212
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
P+E + V +I SC++LG+ + K N FV T+L+D+++KCG L A++
Sbjct: 213 RPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARK 272
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+FD+ M +RD +N+MI G A +G
Sbjct: 273 VFDE--------------------------------MSQRDVSCYNAMIRGLAVHGFGQE 300
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLSILGYNSL 250
I+L+K +IS PD T V SAC H G + G+ + + Y I+ + Y L
Sbjct: 301 GIELYKSLIS-QGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCL 359
Query: 251 IFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHG 289
+ + R G +EEA ++M + + + + + +HG
Sbjct: 360 VDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHG 399
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N T+++ Y+K G L AR FD+M +R V +NAM+ G A G E + L+ ++
Sbjct: 250 NQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLI 309
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKT------ALLDMHA 121
S G PD T+V IS+CS G L + ++ + +K + Y ++ L+D+
Sbjct: 310 SQGLVPDSATFVVTISACSHSG---LVDEGLQIFNSMK--AVYGIEPKVEHYGCLVDLLG 364
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDL 158
+ G L+ A+E ++ V N+ + + + GD
Sbjct: 365 RSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDF 401
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 228/445 (51%), Gaps = 40/445 (8%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++T Y K G + R FD M R+V++ A++SG ++ + +RLF+ M P+
Sbjct: 196 LITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPN 255
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
T+++ +++CS + I L K S +++AL+DM++KCG+++ A I
Sbjct: 256 SVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTI-- 313
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
F E D VS ++ G AQNG AI+
Sbjct: 314 ------------------------------FESTTEVDEVSMTVILVGLAQNGSEEEAIQ 343
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
F M+ + D + +V SL LG S++ + + + N LI MY
Sbjct: 344 FFIRMLQAG-VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMY 402
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
S+CG + ++ +F+ M R+ VS+N++I+ A HGHG+ +KL +M ++P +T++
Sbjct: 403 SKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFL 462
Query: 315 GILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
+L ACSH GL+++G+++ +K P +HY C+IDMLGR G L+EA I S+P+
Sbjct: 463 SLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPL 522
Query: 370 EPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNV 429
+P I+ +LL A H E+GE AA +LF P +SS ++L++NIY+ G+WKE
Sbjct: 523 KPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKT 582
Query: 430 RNIMRKQGVKKITAWS--WVEHPSH 452
M+ GV K T S +EH +H
Sbjct: 583 IKRMKAMGVTKETGISSIEIEHKTH 607
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 194/463 (41%), Gaps = 79/463 (17%)
Query: 6 QRN-VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
RN +V W ++++ YAK G L A FD+MP R V+S N + G+ ++ L
Sbjct: 86 HRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLK 145
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
ML SG D T V+S C + + CL ++ L + S Y D G
Sbjct: 146 RMLGSGGF-DHATLTIVLSVCDT-PEFCLVTKMIHALAIL---SGY-------DKEISVG 193
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
N +I++Y + G R +F+ M R+ ++ ++I+G
Sbjct: 194 N---------------------KLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLI 232
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
+N ++LF ++ P+ +T +S +AC + G ++L +Y I+ +
Sbjct: 233 ENELHEDGLRLFS-LMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESEL 291
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
++L+ MYS+CGS+E+A IF+ D VS ++ GLA +G E I+ +M +
Sbjct: 292 CIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQA 351
Query: 305 GIEPDR--------ITYI---------------------------GILTACSHAGLLEEG 329
G+E D +++I G++ S G L +
Sbjct: 352 GVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDS 411
Query: 330 QKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNATR-- 384
Q VF + + + MI R G A+KL M ++P + SLL+A
Sbjct: 412 QTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHV 471
Query: 385 --IHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
I K EL ++ +EP + +Y + ++ AG KE
Sbjct: 472 GLIDKGRELLN-EMKEVHGIEP-RTEHYTCIIDMLGRAGLLKE 512
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 123/236 (52%), Gaps = 11/236 (4%)
Query: 138 VYRNS-VSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
++RN+ V N+++S YA+ G L A LF++MP RD +S N + G+ +N E+ L
Sbjct: 85 IHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLL 144
Query: 197 KEMISTNDSKPDELTMVSVFSACG--HLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
K M+ + D T+ V S C ++ I A++IL+ Y ++S+ N LI Y
Sbjct: 145 KRMLGSGGF--DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISV--GNKLITSY 200
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
+CG +F M+ R++++ +ISGL + + ++L S M+ + P+ +TY+
Sbjct: 201 FKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYL 260
Query: 315 GILTACSHAGLLEEGQKVFESIKVPDVDHYAC----MIDMLGRVGKLEEAMKLIHS 366
L ACS + + EGQ++ + ++ C ++DM + G +E+A + S
Sbjct: 261 SALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFES 316
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/441 (29%), Positives = 232/441 (52%), Gaps = 37/441 (8%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T ++T Y K G + + + +P + VV W M+SG + G A + + +F++ML SG++
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
+V++SC+ LG L S+ Y ++
Sbjct: 344 LSSEAIASVVASCAQLGSFDLGASV----------HGYVLRH------------------ 375
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
G ++ + N++I+ YA+ G L + +F +M ERD VSWN++I+GYAQN + A
Sbjct: 376 ----GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKA 431
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
+ LF+EM + D T+VS+ AC G+L +G I+ I+ L +L+
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVD 491
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MYS+CG +E A F ++ +D+VS+ LI+G HG G +++ S+ G+EP+ +
Sbjct: 492 MYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVI 551
Query: 313 YIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++ +L++CSH G++++G K+F S+ P+ +H AC++D+L R ++E+A K
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKEN 611
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVG 427
P + G +L+A R + + E+ ++ + ++P ++ +YV L + +A RW +V
Sbjct: 612 FTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVS 671
Query: 428 NVRNIMRKQGVKKITAWSWVE 448
N MR G+KK+ WS +E
Sbjct: 672 ESWNQMRSLGLKKLPGWSKIE 692
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 38/365 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++ +M+ Y K ++ A+ FD+M +R +VSWN M+SGYA G E ++L M
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
G PD+ T+ +S ++ D + + ++ K F + +KTAL+ M+ KCG +
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A+ + + + P +D V W MI+G + G
Sbjct: 298 ASYRVLETI--------------------------------PNKDVVCWTVMISGLMRLG 325
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
+ A+ +F EM+ + E + SV ++C LGS LG + + L
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSE-AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL 384
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
NSLI MY++CG ++++ +IF+ M RDLVS+N +ISG A + + + L +MK ++
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 308 P-DRITYIGILTACSHAGLLEEGQK----VFESIKVPDVDHYACMIDMLGRVGKLEEAMK 362
D T + +L ACS AG L G+ V S P ++DM + G LE A +
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQR 504
Query: 363 LIHSM 367
S+
Sbjct: 505 CFDSI 509
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 164/330 (49%), Gaps = 40/330 (12%)
Query: 43 WNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLD 102
+N+ ++ + G + + F+ ML++ PD T+ +++ +C+SL SI +++
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 103 KVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFAR 162
F S++++ ++L+++ YA+ G L+ AR
Sbjct: 74 VNGFSSDFYISSSLVNL--------------------------------YAKFGLLAHAR 101
Query: 163 DLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHL 222
+F +M ERD V W +MI Y++ G A L EM KP +T++ + S +
Sbjct: 102 KVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEM-RFQGIKPGPVTLLEMLSGVLEI 160
Query: 223 GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLI 282
L + +++ + ++++ NS++ +Y +C + +A +F +M RD+VS+NT+I
Sbjct: 161 TQLQC-LHDFAVIYGFDCDIAVM--NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMI 217
Query: 283 SGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP--D 340
SG AS G+ E +KL+ +M+ DG+ PD+ T+ L+ LE G+ + I D
Sbjct: 218 SGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFD 277
Query: 341 VDHY--ACMIDMLGRVGKLEEAMKLIHSMP 368
VD + +I M + GK E + +++ ++P
Sbjct: 278 VDMHLKTALITMYLKCGKEEASYRVLETIP 307
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 160/360 (44%), Gaps = 42/360 (11%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
+++V YAK G L AR F++M ER VV W AM+ Y+++G E L N+M G +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 73 PDETTWVTVISSCSSLGD-PCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
P T + ++S + CL + V F + V ++L+++ KC ++ A++
Sbjct: 145 PGPVTLLEMLSGVLEITQLQCLHDFAV----IYGFDCDIAVMNSMLNLYCKCDHVGDAKD 200
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+FDQ+ R+ VS N MIS YA +G++S L +M G+ L
Sbjct: 201 LFDQME-QRDMVSWNTMISGYASVGNMSEILKLLYRM-----------------RGDGL- 241
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLI 251
+PD+ T + S G + L +G + + + + +LI
Sbjct: 242 --------------RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALI 287
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
MY +CG E + + + + +D+V + +ISGL G + + + S+M + G +
Sbjct: 288 TMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSE 347
Query: 312 TYIGILTACSHAGLLEEGQKVFESI----KVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
++ +C+ G + G V + D +I M + G L++++ + M
Sbjct: 348 AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 229/412 (55%), Gaps = 10/412 (2%)
Query: 43 WNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLD 102
+N ++ Y +G ++ LF ML+S +P+ T+ ++I + S ++ +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 103 KVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFAR 162
K F + FV+T+ + + + G+L++++++FD + + V+CN+++ A R G++ +A
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDI-LNPCVVACNSLLDACGRNGEMDYAF 172
Query: 163 DLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS--KPDELTMVSVFSACG 220
+ F +MP D VSW ++I G+++ G A+ +F EMI + P+E T VSV S+C
Sbjct: 173 EYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCA 232
Query: 221 HL--GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSY 278
+ G + LG + +I L+ +L+ MY + G +E A IF ++ + + ++
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 279 NTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI-- 336
N +IS LAS+G + +++ MK + P+ IT + ILTAC+ + L++ G ++F SI
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICS 352
Query: 337 ---KVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGE 393
+P +HY C++D++GR G L +A I S+P EP A + G+LL A +IH+ ELG
Sbjct: 353 EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGN 412
Query: 394 LAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWS 445
+L ++P + YV LS AL W E +R M + G++KI A+S
Sbjct: 413 TVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 131/268 (48%), Gaps = 39/268 (14%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
VV +++ ++G + A YF +MP VVSW +++G+++ G + + +F +M+
Sbjct: 152 VVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQ 211
Query: 69 SGN---EPDETTWVTVISSCSSL--GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+ P+E T+V+V+SSC++ G L + I + + + TALLDM+ K
Sbjct: 212 NERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKA 271
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G+L+ A IFDQ+ RD + +WN++I+
Sbjct: 272 GDLEMALTIFDQI-------------------------RD-------KKVCAWNAIISAL 299
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKL 242
A NG A+++F EM+ ++ P+ +T++++ +AC + LGI SI +EY+I
Sbjct: 300 ASNGRPKQALEMF-EMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIP 358
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEM 270
+ Y ++ + R G + +A Q +
Sbjct: 359 TSEHYGCVVDLIGRAGLLVDAANFIQSL 386
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/482 (30%), Positives = 249/482 (51%), Gaps = 49/482 (10%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T+++ Y K G ++ A + FD+M E+ VV+WN ++SGY Q G + + + M +
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLK 372
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
D T T++S+ + + L + + + F S+ + + ++DM+AKCG++ A+++
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKV 432
Query: 133 FD---------------------------------QL-GVYRNSVSCNAMISAYARLGDL 158
FD QL GV N ++ N +I + R G +
Sbjct: 433 FDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQV 492
Query: 159 SFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVS 214
A+D+F +M + +SW +M+ G QNG S AI LF + + +P+ ++
Sbjct: 493 DEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI-LFLRKMQESGLRPNAFSITV 551
Query: 215 VFSACGHLGSLSLG--IWAVSILN-EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
SAC HL SL +G I I N ++ +SI SL+ MY++CG + +A +F
Sbjct: 552 ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSI--ETSLVDMYAKCGDINKAEKVFGSKL 609
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK 331
+L N +IS A +G+ E I L ++ G++PD IT +L+AC+HAG + + +
Sbjct: 610 YSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIE 669
Query: 332 VFESI-----KVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIH 386
+F I P ++HY M+D+L G+ E+A++LI MP +P A + SL+ +
Sbjct: 670 IFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQ 729
Query: 387 KQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSW 446
++ EL + + KL EP NS NYV +SN YA+ G W EV +R +M+ +G+KK SW
Sbjct: 730 RKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSW 789
Query: 447 VE 448
++
Sbjct: 790 IQ 791
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 187/379 (49%), Gaps = 54/379 (14%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
V +++ Y K G L A FD++P+R+ V+WNA++ GY Q+G E +RLF+DM
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 69 SGNEPDETTWVTVISSCSSL-----GDPCLAESIVR--KLDKVKFHSNYFVKTALLDMHA 121
G EP T T +S+ +++ G A +IV +LD + + T+LL+ +
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI-------LGTSLLNFYC 320
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
K G ++ A+ +FD +M E+D V+WN +I+
Sbjct: 321 KVGLIEYAEMVFD--------------------------------RMFEKDVVTWNLIIS 348
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
GY Q G AI + +++ K D +T+ ++ SA +L LG + +
Sbjct: 349 GYVQQGLVEDAIYMC-QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFE 407
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
I+ ++++ MY++CGS+ +A +F +DL+ +NTL++ A G E ++L M
Sbjct: 408 SDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKL 357
+ +G+ P+ IT+ I+ + G ++E + +F ++ +P++ + M++ + + G
Sbjct: 468 QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCS 527
Query: 358 EEAMKLIHSMP---MEPHA 373
EEA+ + M + P+A
Sbjct: 528 EEAILFLRKMQESGLRPNA 546
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 183/386 (47%), Gaps = 50/386 (12%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
RN T +V YAK L+ A + F K+ R+V SW A++ + G + F +M
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
L + PD V +C +L + + K FV ++L DM+ KCG L
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
A ++ F+++P+R+ V+WN+++ GY QN
Sbjct: 225 DDASKV--------------------------------FDEIPDRNAVAWNALMVGYVQN 252
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW--AVSILNEYQIKLSI 244
G++ AI+LF +M +P +T+ + SA ++G + G A++I+N ++ +I
Sbjct: 253 GKNEEAIRLFSDM-RKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELD-NI 310
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
LG SL+ Y + G +E A ++F M +D+V++N +ISG G + I + M+ +
Sbjct: 311 LG-TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE 369
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKV--------FESIKVPDVDHYACMIDMLGRVGK 356
++ D +T +++A + L+ G++V FES D+ + ++DM + G
Sbjct: 370 KLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFES----DIVLASTVMDMYAKCGS 425
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNA 382
+ +A K+ S +E ++ +LL A
Sbjct: 426 IVDAKKVFDS-TVEKDLILWNTLLAA 450
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 228 bits (582), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 255/482 (52%), Gaps = 54/482 (11%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+VT Y + G + AR FD+MP+R + M+ A++G E++ F +M G + D
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
+++ + +L D + I + K + S+ F+ ++L+DM++K G + A+++F
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP------------------------- 169
LG ++ V NAMIS YA A +L M
Sbjct: 177 DLG-EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEE 235
Query: 170 --------------ERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSV 215
+ D VSW S+I+G N ++ A FK+M+ T+ P+ T++++
Sbjct: 236 KVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQML-THGLYPNSATIITL 294
Query: 216 FSACGHLGSLSLG--IWAVSILNEYQIKLSILGY--NSLIFMYSRCGSMEEATLIFQEMA 271
AC L + G I S++ L G+ ++L+ MY +CG + EA ++F++
Sbjct: 295 LPACTTLAYMKHGKEIHGYSVVT----GLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK 331
+ V++N++I A+HG + ++L +M+ G + D +T+ ILTACSHAGL + GQ
Sbjct: 351 KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQN 410
Query: 332 VFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIH 386
+F ++ VP ++HYACM+D+LGR GKL EA ++I +M MEP ++G+LL A R H
Sbjct: 411 LFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNH 470
Query: 387 KQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSW 446
+EL +AA L +EP NS N +LL+++YA AG W+ V ++ +++K+ ++ SW
Sbjct: 471 GNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSW 530
Query: 447 VE 448
VE
Sbjct: 531 VE 532
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 159/337 (47%), Gaps = 43/337 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
++++ Y+K G + AR F + E+ +V +NAM+SGYA + A E + L DM G +
Sbjct: 156 SSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIK 215
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
PD TW +IS S + + I+ + + + T+++ + A +
Sbjct: 216 PDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDA 275
Query: 133 FDQL---GVYRNSVSC-----------------------------------NAMISAYAR 154
F Q+ G+Y NS + +A++ Y +
Sbjct: 276 FKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGK 335
Query: 155 LGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVS 214
G +S A LF K P++ TV++NSMI YA +G + A++LF +M +T + K D LT +
Sbjct: 336 CGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE-KLDHLTFTA 394
Query: 215 VFSACGHLGSLSLGIWAVSIL-NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR 273
+ +AC H G LG ++ N+Y+I + Y ++ + R G + EA + + M
Sbjct: 395 ILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRME 454
Query: 274 -DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
DL + L++ +HG+ +E ++ +K + +EP+
Sbjct: 455 PDLFVWGALLAACRNHGN-MELARIAAKHLAE-LEPE 489
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 4/208 (1%)
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
G+ R + +++ Y G + AR +F++MP+RD MI A+NG ++ F
Sbjct: 46 GIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFF 105
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSR 256
+EM + K D + S+ A +L G ++ ++ + +SLI MYS+
Sbjct: 106 REMYK-DGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSK 164
Query: 257 CGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGI 316
G + A +F ++ +DLV +N +ISG A++ E + L+ MK GI+PD IT+ +
Sbjct: 165 FGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNAL 224
Query: 317 LTACSHAGLLEEGQKVFESIKVPDVDHY 344
++ SH + +KV E +++ +D Y
Sbjct: 225 ISGFSH---MRNEEKVSEILELMCLDGY 249
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 234/438 (53%), Gaps = 39/438 (8%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+V YA+ G L + +R++V+WN+++S YA G ++ + LF M++ +PD
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD 404
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
T + IS+C + G L + I + + S+ FV+ +L+DM
Sbjct: 405 AFTLASSISACENAGLVPLGKQIHGHVIRTDV-SDEFVQNSLIDM--------------- 448
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
Y++ G + A +FN++ R V+WNSM+ G++QNG S+ AI
Sbjct: 449 -----------------YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
LF M + + +E+T ++V AC +GSL G W L +K + +LI MY
Sbjct: 492 LFDYMYHSY-LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMY 549
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
++CG + A +F+ M++R +VS++++I+ HG I ++M E G +P+ + ++
Sbjct: 550 AKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFM 609
Query: 315 GILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPME 370
+L+AC H+G +EEG+ F +K P+ +H+AC ID+L R G L+EA + I MP
Sbjct: 610 NVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFL 669
Query: 371 PHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVR 430
A ++GSL+N RIH+++++ + L + ++ Y LLSNIYA G W+E +R
Sbjct: 670 ADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLR 729
Query: 431 NIMRKQGVKKITAWSWVE 448
+ M+ +KK+ +S +E
Sbjct: 730 SAMKSSNLKKVPGYSAIE 747
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 191/363 (52%), Gaps = 39/363 (10%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G + V T+++ Y ++GNL A FD MP R +V+W+ ++S ++G ++ +R+
Sbjct: 130 GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRM 189
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F M+ G EPD T ++V+ C+ LG +A S+ ++ + F + + +LL M++K
Sbjct: 190 FKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSK 249
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CG+L +++ IF+++ +N+VS AMIS+Y R G+ S E+
Sbjct: 250 CGDLLSSERIFEKIA-KKNAVSWTAMISSYNR-GEFS----------EK----------- 286
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQI 240
A++ F EMI + +P+ +T+ SV S+CG +G + G + ++ E
Sbjct: 287 ---------ALRSFSEMIKSG-IEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDP 336
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
L +L+ +Y+ CG + + + + ++ R++V++N+LIS A G I+ + L +
Sbjct: 337 NYESLSL-ALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQ 395
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDV-DHYA--CMIDMLGRVGKL 357
M I+PD T ++AC +AGL+ G+++ + DV D + +IDM + G +
Sbjct: 396 MVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSV 455
Query: 358 EEA 360
+ A
Sbjct: 456 DSA 458
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 173/374 (46%), Gaps = 48/374 (12%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G +R+ + T ++ YA G+ ++R+ F+ P + ++ + L
Sbjct: 28 GRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDL 87
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
++ ++S + + + +V+ +C+ + H
Sbjct: 88 YHRLVSETTQISKFVFPSVLRACAGSRE-----------------------------HLS 118
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
G + I + GV ++V +++ Y + G+LS A +F+ MP RD V+W+++++
Sbjct: 119 VGGKVHGRII--KGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS 176
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
+NGE + A+++FK M+ + +PD +TM+SV C LG L + + L
Sbjct: 177 CLENGEVVKALRMFKCMVD-DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDL 235
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
NSL+ MYS+CG + + IF+++A ++ VS+ +IS + ++ S+M
Sbjct: 236 DETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI 295
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKV------------FESIKVPDVDHYACMIDM 350
+ GIEP+ +T +L++C GL+ EG+ V +ES+ + V+ YA
Sbjct: 296 KSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYA----E 351
Query: 351 LGRVGKLEEAMKLI 364
G++ E ++++
Sbjct: 352 CGKLSDCETVLRVV 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 87/202 (43%), Gaps = 35/202 (17%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+++ T T ++ YAK G+L A F M RS+VSW++M++ Y G + FN M
Sbjct: 537 KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 596
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
+ SG +P+E ++ V+S+C G +++ K++ N
Sbjct: 597 VESGTKPNEVVFMNVLSACGHSG----------SVEEGKYYFN----------------- 629
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE-RDTVSWNSMIAG--Y 183
+ GV NS I +R GDL A +MP D W S++ G
Sbjct: 630 -----LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRI 684
Query: 184 AQNGESLMAIKLFKEMISTNDS 205
Q + + AIK I T+D+
Sbjct: 685 HQKMDIIKAIKNDLSDIVTDDT 706
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 138/423 (32%), Positives = 214/423 (50%), Gaps = 41/423 (9%)
Query: 37 ERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAES 96
+R + L G +G E V L + SSG + + T+ ++ C + +
Sbjct: 73 QRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKR 129
Query: 97 IVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLG 156
I ++ V F N ++K LL + YA G
Sbjct: 130 IHAQMFVVGFALNEYLKVKLLIL--------------------------------YALSG 157
Query: 157 DLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVF 216
DL A LF + RD + WN+MI+GY Q G + ++ +M N PD+ T SVF
Sbjct: 158 DLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDM-RQNRIVPDQYTFASVF 216
Query: 217 SACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV 276
AC L L G A +++ + IK +I+ ++L+ MY +C S + +F +++TR+++
Sbjct: 217 RACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 277 SYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI 336
++ +LISG HG E +K KMKE+G P+ +T++ +LTAC+H GL+++G + F S+
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSM 336
Query: 337 KV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVEL 391
K P+ HYA M+D LGR G+L+EA + + P + H ++GSLL A RIH V+L
Sbjct: 337 KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKL 396
Query: 392 GELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPS 451
ELAA K ++P N NYV+ +N YA G + VR M GVKK +S +E
Sbjct: 397 LELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQG 456
Query: 452 HVH 454
VH
Sbjct: 457 EVH 459
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 152/367 (41%), Gaps = 56/367 (15%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
YA SG+L+TA I F + R ++ WNAM+SGY Q G E + ++ DM + PD+ T+
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
+V +CS+L + + K SN V +AL+DM+ KC + +FDQL
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
RN ++ ++IS Y G +S F KM E
Sbjct: 273 -RNVITWTSLISGYGYHGKVSEVLKCFEKMKE---------------------------- 303
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGIWA--VSILNEYQIKLSILGYNSLIFMYSR 256
+P+ +T + V +AC H G + G W S+ +Y I+ Y +++ R
Sbjct: 304 ----EGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKRDYGIEPEGQHYAAMVDTLGR 358
Query: 257 CGSMEEA-TLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI---T 312
G ++EA + + + +L+ HG+ +KL+ +E D
Sbjct: 359 AGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN----VKLLELAATKFLELDPTNGGN 414
Query: 313 YIGILTACSHAGLLEEGQKVFESIKVPDV--DHYACMIDMLGRVGKL----------EEA 360
Y+ + GL E KV ++ V D I++ G V + E+
Sbjct: 415 YVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKI 474
Query: 361 MKLIHSM 367
K +H M
Sbjct: 475 YKKVHEM 481
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N++ + +V Y K + FD++ R+V++W +++SGY G E ++ F M
Sbjct: 243 NIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMK 302
Query: 68 SSGNEPDETTWVTVISSCSSLG 89
G P+ T++ V+++C+ G
Sbjct: 303 EEGCRPNPVTFLVVLTACNHGG 324
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 227/449 (50%), Gaps = 36/449 (8%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
Q N VT +++ +SG+++T R F +P+ SV +WNAMLSGY+ E + F
Sbjct: 347 QPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQ 406
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M +PD+TT ++SSC+ L + I + + + N + + L+ ++++C
Sbjct: 407 MQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEK 466
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
++ ++ IFD D N++ D WNSMI+G+
Sbjct: 467 MEISECIFD----------------------------DCINEL---DIACWNSMISGFRH 495
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
N A+ LF+ M T P+E + +V S+C L SL G ++ +
Sbjct: 496 NMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSF 555
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
+L MY +CG ++ A F + ++ V +N +I G +G G E + L KM G
Sbjct: 556 VETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSG 615
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEA 360
+PD IT++ +LTACSH+GL+E G ++ S++ P++DHY C++D LGR G+LE+A
Sbjct: 616 EKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDA 675
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALA 420
KL + P + + ++ LL++ R+H V L A KL ++P +S+ YVLLSN Y+
Sbjct: 676 EKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSL 735
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSWVEH 449
+W + ++ +M K V K SW +
Sbjct: 736 RQWDDSAALQGLMNKNRVHKTPGQSWTTY 764
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 172/379 (45%), Gaps = 53/379 (13%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R+V +W +T K G+L A FD MPER VVSWN M+S + G + + ++ M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 67 LSSGNEPDETTWVTVISSCSSLGD-----PCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
+ G P T +V+S+CS + D C ++ LDK N FV ALL M
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDK-----NIFVGNALLSM-- 182
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDL-SFARDLFNKMPERDTVSWNSMI 180
YA+ G + + +F + + + VS+ ++I
Sbjct: 183 ------------------------------YAKCGFIVDYGVRVFESLSQPNEVSYTAVI 212
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS-ACGHLGSLSLG-IWAVSILNEY 238
G A+ + L A+++F+ M + D + + ++ S + G SL I+ + +
Sbjct: 213 GGLARENKVLEAVQMFRLMCEKG-VQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQI 271
Query: 239 QIKLSILGY-------NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHG 291
LG+ NSL+ +Y++ M A LIF EM ++VS+N +I G
Sbjct: 272 HCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRS 331
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDML 351
+ ++ +++M++ G +P+ +T I +L AC +G +E G+++F SI P V + M+
Sbjct: 332 DKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGY 391
Query: 352 GRVGKLEEAMKLIHSMPME 370
EEA+ M +
Sbjct: 392 SNYEHYEEAISNFRQMQFQ 410
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 121/217 (55%), Gaps = 3/217 (1%)
Query: 103 KVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFAR 162
++ S+ ++ LLD++ +CG+ A+++FD++ V R+ S NA ++ ++GDL A
Sbjct: 34 RMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSV-RDVYSWNAFLTFRCKVGDLGEAC 92
Query: 163 DLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHL 222
++F+ MPERD VSWN+MI+ + G A+ ++K M+ + P T+ SV SAC +
Sbjct: 93 EVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMV-CDGFLPSRFTLASVLSACSKV 151
Query: 223 GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSM-EEATLIFQEMATRDLVSYNTL 281
G+ + + + +I N+L+ MY++CG + + +F+ ++ + VSY +
Sbjct: 152 LDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAV 211
Query: 282 ISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILT 318
I GLA +E +++ M E G++ D + IL+
Sbjct: 212 IGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 150/448 (33%), Positives = 225/448 (50%), Gaps = 56/448 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T++V Y K G + AR F+ + +R +V WNA++S Y +G E L M S N
Sbjct: 181 TSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNR 240
Query: 73 --PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
D T+ +++S+C + I L KV + + V TALL+M+AK +L
Sbjct: 241 FRGDYFTFSSLLSACRIEQ----GKQIHAILFKVSYQFDIPVATALLNMYAKSNHL---- 292
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
S AR+ F M R+ VSWN+MI G+AQNGE
Sbjct: 293 ----------------------------SDARECFESMVVRNVVSWNAMIVGFAQNGEGR 324
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY--- 247
A++LF +M+ N +PDELT SV S+C + IW + + K +
Sbjct: 325 EAMRLFGQMLLEN-LQPDELTFASVLSSCAKFSA----IWEIKQVQAMVTKKGSADFLSV 379
Query: 248 -NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
NSLI YSR G++ EA L F + DLVS+ ++I LASHG E +++ M + +
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-L 438
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFE------SIKVPDVDHYACMIDMLGRVGKLEEA 360
+PD+IT++ +L+ACSH GL++EG + F+ I+ D +HY C+ID+LGR G ++EA
Sbjct: 439 QPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAED-EHYTCLIDLLGRAGFIDEA 497
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALA 420
+++SMP EP + IH++ E + A KL +EP NY +LSN Y
Sbjct: 498 SDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSE 557
Query: 421 GRWKEVGNVRNIMRKQGVK-KITAWSWV 447
G W + +R R+ K SW+
Sbjct: 558 GHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 136/268 (50%), Gaps = 35/268 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
Q ++ T ++ YAKS +L AR F+ M R+VVSWNAM+ G+AQ+G E +RLF
Sbjct: 273 QFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQ 332
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
ML +PDE T+ +V+SSC+ KF + +
Sbjct: 333 MLLENLQPDELTFASVLSSCA------------------KFSAIW--------------E 360
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+K Q + + G N++IS+Y+R G+LS A F+ + E D VSW S+I A
Sbjct: 361 IKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALAS 420
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLSI 244
+G + ++++F+ M+ +PD++T + V SAC H G + G+ + E Y+I+
Sbjct: 421 HGFAEESLQMFESML--QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAED 478
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMAT 272
Y LI + R G ++EA+ + M T
Sbjct: 479 EHYTCLIDLLGRAGFIDEASDVLNSMPT 506
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 191/470 (40%), Gaps = 93/470 (19%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQS----------GAALETVRLFN 64
++ Y K A FD+MP R++V+WN ++ G Q G + LF
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFT 136
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
D+ D +++ +I C+ + + + K S+ F T+L+ + KCG
Sbjct: 137 DV-----SLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCG 191
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ A+ +F+ + +RD V WN++++ Y
Sbjct: 192 LIVEARRVFE--------------------------------AVLDRDLVLWNALVSSYV 219
Query: 185 QNGESLMAIKLFKEMIS-TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
NG A L K M S N + D T S+ SAC + G +IL + +
Sbjct: 220 LNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFD 275
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
I +L+ MY++ + +A F+ M R++VS+N +I G A +G G E ++L +M
Sbjct: 276 IPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLL 335
Query: 304 DGIEPDRITYIGILTAC-----------------------------------SHAGLLEE 328
+ ++PD +T+ +L++C S G L E
Sbjct: 336 ENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSE 395
Query: 329 GQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM--PMEPHAGIYGSLLNATRIH 386
F SI+ PD+ + +I L G EE++++ SM ++P + +L+A
Sbjct: 396 ALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHG 455
Query: 387 KQVELGELAAAKL---FTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIM 433
V+ G ++ + +E + +Y L ++ AG E +V N M
Sbjct: 456 GLVQEGLRCFKRMTEFYKIEAED-EHYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ-NGESLMAIKL 195
G+Y + N ++ AY ++ + A LF++MP R+ V+WN +I G Q +G++ L
Sbjct: 66 GIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHL 125
Query: 196 ---FKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
+ I D D ++ + + C ++ GI ++ + ++ S SL+
Sbjct: 126 GFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVH 185
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG--IEPDR 310
Y +CG + EA +F+ + RDLV +N L+S +G E L+ M D D
Sbjct: 186 FYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDY 245
Query: 311 ITYIGILTACS-------HAGL------------------------LEEGQKVFESIKVP 339
T+ +L+AC HA L L + ++ FES+ V
Sbjct: 246 FTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVR 305
Query: 340 DVDHYACMIDMLGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNA 382
+V + MI + G+ EAM+L M +E P + S+L++
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS 351
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 220/420 (52%), Gaps = 41/420 (9%)
Query: 44 NAMLSGYAQSGAALETVRLFNDMLSSGNEP-DETTWVTVISSCSSLGDPCLAESIVRKLD 102
N M+ ++ S E RLF + + + P + + + C GD I K+
Sbjct: 81 NTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIF 140
Query: 103 KVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFAR 162
F S+ + T L+D+++ C N A ++FD++
Sbjct: 141 SDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEI-------------------------- 174
Query: 163 DLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS--KPDELTMVSVFSACG 220
P+RDTVSWN + + Y +N + + LF +M + D KPD +T + AC
Sbjct: 175 ------PKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACA 228
Query: 221 HLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNT 280
+LG+L G ++E + ++ N+L+ MYSRCGSM++A +F M R++VS+
Sbjct: 229 NLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTA 288
Query: 281 LISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-- 338
LISGLA +G G E I+ ++M + GI P+ T G+L+ACSH+GL+ EG F+ ++
Sbjct: 289 LISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGE 348
Query: 339 ----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGEL 394
P++ HY C++D+LGR L++A LI SM M+P + I+ +LL A R+H VELGE
Sbjct: 349 FKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGER 408
Query: 395 AAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+ L ++ + +YVLL N Y+ G+W++V +R++M+++ + S +E VH
Sbjct: 409 VISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVH 468
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 157/372 (42%), Gaps = 83/372 (22%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN- 71
TT++ Y+ N A FD++P+R VSWN + S Y ++ + + LF+ M + +
Sbjct: 152 TTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDG 211
Query: 72 --EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
+PD T + + +C++LG + + +D+ + L+ M+++CG++ A
Sbjct: 212 CVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKA 271
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
++F Y M ER+ VSW ++I+G A NG
Sbjct: 272 YQVF------------------YG--------------MRERNVVSWTALISGLAMNGFG 299
Query: 190 LMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN--EYQIKLSILGY 247
AI+ F EM+ S P+E T+ + SAC H G ++ G+ + E++IK ++ Y
Sbjct: 300 KEAIEAFNEMLKFGIS-PEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHY 358
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
++ + R +++A + + M ++
Sbjct: 359 GCVVDLLGRARLLDKAYSLIKSME----------------------------------MK 384
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFE---SIKVPDVDHYACMIDMLGRVGKLEEAMKL- 363
PD + +L AC G +E G++V +K + Y +++ VGK E+ +L
Sbjct: 385 PDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELR 444
Query: 364 -------IHSMP 368
IH+ P
Sbjct: 445 SLMKEKRIHTKP 456
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 237/455 (52%), Gaps = 44/455 (9%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
+++ V+ + + +L AR + + +WN + GY+ S + +E++ ++++M
Sbjct: 47 IISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKR 106
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
G +P++ T+ ++ +C+S I ++ K F + +V L+ ++ C
Sbjct: 107 RGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKT-- 164
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
S AR +F++M ER+ VSWNS++ +NG+
Sbjct: 165 ------------------------------SDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
+ + F EMI PDE TMV + SACG G+LSLG S + +++L+
Sbjct: 195 LNLVFECFCEMIGKRFC-PDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGT 251
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK-MKEDGIE 307
+L+ MY++ G +E A L+F+ M +++ +++ +I GLA +G E ++L SK MKE +
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMK 362
P+ +T++G+L ACSH GL+++G K F ++ P + HY M+D+LGR G+L EA
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVE---LGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
I MP EP A ++ +LL+A IH + +GE +L +EP S N V+++N +A
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAE 431
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
A W E VR +M++ +KKI S +E H
Sbjct: 432 ARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFH 466
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 140/286 (48%), Gaps = 42/286 (14%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V ++ Y AR FD+M ER+VVSWN++++ ++G F +M+
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 68 SSGNEPDETTWVTVISSCS---SLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
PDETT V ++S+C SLG ++ +VR+L+ N + TAL+DM+AK G
Sbjct: 207 GKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELE-----LNCRLGTALVDMYAKSG 261
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
L+ YARL +F +M +++ +W++MI G A
Sbjct: 262 GLE------------------------YARL--------VFERMVDKNVWTWSAMIVGLA 289
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLS 243
Q G + A++LF +M+ + +P+ +T + V AC H G + G + + ++IK
Sbjct: 290 QYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPM 349
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASH 288
++ Y +++ + R G + EA ++M D V + TL+S + H
Sbjct: 350 MIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 36/219 (16%)
Query: 1 MMGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETV 60
M+ E + N T +V YAKSG L+ AR+ F++M +++V +W+AM+ G AQ G A E +
Sbjct: 239 MVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEAL 298
Query: 61 RLFNDMLS-SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
+LF+ M+ S P+ T++ V+ +CS G +++K+ K + +
Sbjct: 299 QLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIH-------KIKPMMI 351
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP-ERDTVSWNS 178
H AM+ R G L+ A D KMP E D V W +
Sbjct: 352 HY------------------------GAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRT 387
Query: 179 MIAG---YAQNGESLMAIKLFKEMISTNDSKPDELTMVS 214
+++ + + + K+ K +I + L +V+
Sbjct: 388 LLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVA 426
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 224 bits (572), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 220/405 (54%), Gaps = 14/405 (3%)
Query: 55 AALETVRLFNDMLSSGNEPDETTWVTVISSCSSL--GDPCLAESIVRKLDKVKFHSNYFV 112
++L + R F +M PD T+ V +C++ GD L +++ + + S+ F
Sbjct: 95 SSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFT 154
Query: 113 KTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERD 172
L+ +++ + +A ++FD+ R+ V+ N +I + ++ AR+LF+ MP RD
Sbjct: 155 LNTLIRVYSLIAPIDSALQLFDE-NPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRD 213
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV 232
VSWNS+I+GYAQ AIKLF EM++ KPD + +VS SAC G G
Sbjct: 214 LVSWNSLISGYAQMNHCREAIKLFDEMVALG-LKPDNVAIVSTLSACAQSGDWQKGKAIH 272
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGI 292
++ + L+ Y++CG ++ A IF+ + + L ++N +I+GLA HG+G
Sbjct: 273 DYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGE 332
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-VPDVD----HYACM 347
+ KM GI+PD +T+I +L CSH+GL++E + +F+ ++ + DV+ HY CM
Sbjct: 333 LTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCM 392
Query: 348 IDMLGRVGKLEEAMKLIHSMPME----PHAGIYGSLLNATRIHKQVELGELAAAKLFTVE 403
D+LGR G +EEA ++I MP + + LL RIH +E+ E AA ++ +
Sbjct: 393 ADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALS 452
Query: 404 PHNSSNYVLLSNIYALAGRWKEVGNVRNIM-RKQGVKKITAWSWV 447
P + Y ++ +YA A RW+EV VR I+ R + VKK +S V
Sbjct: 453 PEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 164/368 (44%), Gaps = 77/368 (20%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
PQR+VVT+ ++ G K+ + AR FD MP R +VSWN+++SGYAQ E ++LF+
Sbjct: 179 PQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFD 238
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+M++ G +PD V+ +S+C+ GD ++I + + + F+ T L+D +AKCG
Sbjct: 239 EMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCG 298
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ A EIF +L + + NAMI+ G A
Sbjct: 299 FIDTAMEIF-ELCSDKTLFTWNAMIT-------------------------------GLA 326
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
+G + + F++M+S+ KPD +T +SV C H
Sbjct: 327 MHGNGELTVDYFRKMVSSG-IKPDGVTFISVLVGCSH----------------------- 362
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMAT-----RDLVSYNTLISGLASHGHGIECIKLIS 299
G ++EA +F +M + R++ Y + L G E ++I
Sbjct: 363 ------------SGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIE 410
Query: 300 KMKEDGIEPDR-ITYIGILTACSHAGLLEEGQKVFESIKV---PDVDHYACMIDMLGRVG 355
+M +DG ++ + + G+L C G +E +K +K D Y M++M
Sbjct: 411 QMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAE 470
Query: 356 KLEEAMKL 363
+ EE +K+
Sbjct: 471 RWEEVVKV 478
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 46/270 (17%)
Query: 140 RNSVSCNAMI-------SAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
+NSV N + SA A +S+A +F + T +N++I + S ++
Sbjct: 39 QNSVFANVLFAITSISPSASASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLS 98
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACG-------------HLGSLSLGIW--------- 230
K F + PD T VF AC H +L G+
Sbjct: 99 SKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTL 158
Query: 231 ------------AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSY 278
A+ + +E + ++ YN LI + + A +F M RDLVS+
Sbjct: 159 IRVYSLIAPIDSALQLFDE-NPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSW 217
Query: 279 NTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV 338
N+LISG A H E IKL +M G++PD + + L+AC+ +G ++G+ + + K
Sbjct: 218 NSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 339 PD--VDHYAC--MIDMLGRVGKLEEAMKLI 364
+D + ++D + G ++ AM++
Sbjct: 278 KRLFIDSFLATGLVDFYAKCGFIDTAMEIF 307
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/425 (33%), Positives = 224/425 (52%), Gaps = 21/425 (4%)
Query: 43 WNAMLSGYAQSGAALETVRLFNDM-----LSSGNEP----DETTWVTVISSCSSLGDPCL 93
+N +L Y+ L L++ + LS N+ D T++ ++ + S+ P L
Sbjct: 80 FNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSNPRFPSL 139
Query: 94 AESIVRKLD--KVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
I K+ F S+ +V+TAL+ M+ GN+ A ++FD++ RN V+ N MI+
Sbjct: 140 LLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMP-ERNPVTWNVMITG 198
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
LGD A KMP R VSW ++I GYA+ + AI LF M++ + KP+E+T
Sbjct: 199 LTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEIT 258
Query: 212 MVSVFSACGHLGSLSL-GIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
++++ A +LG L + G + + I NSLI Y++CG ++ A F E+
Sbjct: 259 ILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEI 318
Query: 271 AT--RDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEE 328
++LVS+ T+IS A HG G E + + M+ G++P+R+T I +L ACSH GL EE
Sbjct: 319 PNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEE 378
Query: 329 GQKVFESIKV------PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNA 382
F + V PDV HY C++DML R G+LEEA K+ +P+E A ++ LL A
Sbjct: 379 EFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGA 438
Query: 383 TRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKIT 442
++ EL E KL +E + +YVL+SNI+ GR+ + R M +GV K+
Sbjct: 439 CSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLP 498
Query: 443 AWSWV 447
S V
Sbjct: 499 GHSQV 503
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 35/274 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+RN VTW M+TG G+ + A + +KMP R+VVSW ++ GYA+ E + LF+
Sbjct: 185 PERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFS 244
Query: 65 DMLS-SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKF-HSNYFVKTALLDMHAK 122
M++ +P+E T + ++ + +LGD + S+ + K F + V +L+D +AK
Sbjct: 245 RMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAK 304
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CG +++A + F ++ R ++ VSW +MI+
Sbjct: 305 CGCIQSAFKFFIEIPNGR------------------------------KNLVSWTTMISA 334
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGH--LGSLSLGIWAVSILNEYQI 240
+A +G A+ +FK+M KP+ +TM+SV +AC H L + +++NEY+I
Sbjct: 335 FAIHGMGKEAVSMFKDMERLG-LKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKI 393
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRD 274
+ Y L+ M R G +EEA I E+ +
Sbjct: 394 TPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEE 427
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 82/161 (50%), Gaps = 4/161 (2%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMP--ERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN 71
+++ YAK G +++A +F ++P +++VSW M+S +A G E V +F DM G
Sbjct: 297 SLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGL 356
Query: 72 EPDETTWVTVISSCS--SLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
+P+ T ++V+++CS L + E +++ K + L+DM + G L+ A
Sbjct: 357 KPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEA 416
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE 170
++I ++ + +V ++ A + D A + K+ E
Sbjct: 417 EKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLME 457
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/493 (29%), Positives = 243/493 (49%), Gaps = 56/493 (11%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMP---------------------------- 36
P R+VV WT M+TGYA S A F +M
Sbjct: 72 PDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGA 131
Query: 37 -----------ERSVVSWNAMLSGYAQSGAALETVRL-FNDMLSSGNEPDETTWVTVISS 84
E S+ NAM++ YA +E L F D+ ++ TW T+I+
Sbjct: 132 LVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI----KVKNDVTWTTLITG 187
Query: 85 CSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRN 141
+ LGD + +++ + T + A ++ ++I + G N
Sbjct: 188 FTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSN 247
Query: 142 SVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIS 201
N+++ Y R G LS A+ F++M ++D ++WN++I+ + +S A+ +F+
Sbjct: 248 LPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLMFQR-FE 305
Query: 202 TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSME 261
+ P+ T S+ +AC ++ +L+ G + ++ N+LI MY++CG++
Sbjct: 306 SQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIP 365
Query: 262 EATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTAC 320
++ +F E+ R +LVS+ +++ G SHG+G E ++L KM GI PDRI ++ +L+AC
Sbjct: 366 DSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSAC 425
Query: 321 SHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGI 375
HAGL+E+G K F ++ PD D Y C++D+LGR GK+ EA +L+ MP +P
Sbjct: 426 RHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDEST 485
Query: 376 YGSLLNATRIHKQVEL-GELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMR 434
+G++L A + HK L LAA K+ ++P YV+LS IYA G+W + VR +MR
Sbjct: 486 WGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMR 545
Query: 435 KQGVKKITAWSWV 447
G KK SW+
Sbjct: 546 MMGNKKEAGMSWI 558
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 177/371 (47%), Gaps = 49/371 (13%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
+P+++ + T ++ Y + G ++ AR FD+MP+R VV+W AM++GYA S F
Sbjct: 40 KPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECF 99
Query: 64 NDMLSSGNEPDETTWVTVISSCSS---LGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
++M+ G P+E T +V+ SC + L L +V KL + +V A+++M+
Sbjct: 100 HEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG---MEGSLYVDNAMMNMY 156
Query: 121 AKCG-NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
A C ++AA IF + V +N V+ +I+ + LGD
Sbjct: 157 ATCSVTMEAACLIFRDIKV-KNDVTWTTLITGFTHLGD---------------------- 193
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNE 237
+ +K++K+M+ N ++V A + S++ G I A I
Sbjct: 194 ---------GIGGLKMYKQMLLENAEVTPYCITIAV-RASASIDSVTTGKQIHASVIKRG 243
Query: 238 YQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKL 297
+Q L ++ NS++ +Y RCG + EA F EM +DL+++NTLIS L E + +
Sbjct: 244 FQSNLPVM--NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSDSSEALLM 300
Query: 298 ISKMKEDGIEPDRITYIGILTACSHAGLLEEGQ----KVFESIKVPDVDHYACMIDMLGR 353
+ + G P+ T+ ++ AC++ L GQ ++F +V+ +IDM +
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAK 360
Query: 354 VGKLEEAMKLI 364
G + ++ ++
Sbjct: 361 CGNIPDSQRVF 371
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/464 (29%), Positives = 240/464 (51%), Gaps = 56/464 (12%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP-ERSVVSWNAMLSGYAQSGAALETVRLFN 64
Q + M++ YA G++ A+ FD + + ++SWN+M++G+++ LF
Sbjct: 235 QHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFI 294
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M E D T+ ++S+CS + H G
Sbjct: 295 QMQRHWVETDIYTYTGLLSACSG------------------------------EEHQIFG 324
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARL--GDLSFARDLFNKMPERDTVSWNSMIAG 182
K+ + + G+ + + + NA+IS Y + G + A LF + +D +SWNS+I G
Sbjct: 325 --KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVS-----IL 235
+AQ G S A+K F + S+ + K D+ ++ +C L +L LG I A++ +
Sbjct: 383 FAQKGLSEDAVKFFSYLRSS-EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVS 441
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIEC 294
NE+ I +SLI MYS+CG +E A FQ+++++ V++N +I G A HG G
Sbjct: 442 NEFVI-------SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVS 494
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMID 349
+ L S+M ++ D +T+ ILTACSH GL++EG ++ ++ P ++HYA +D
Sbjct: 495 LDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVD 554
Query: 350 MLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSN 409
+LGR G + +A +LI SMP+ P + + L R ++E+ A L +EP +
Sbjct: 555 LLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFT 614
Query: 410 YVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHV 453
YV LS++Y+ +W+E +V+ +M+++GVKK+ WSW+E + V
Sbjct: 615 YVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQV 658
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 208/473 (43%), Gaps = 76/473 (16%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ Y K G L A + FD+MP+R VSWN M+SGY G + LF M SG++ D
Sbjct: 41 ILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVD 100
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
++ ++ +S+ L E + + K + N +V ++L+DM+AKC ++ A E F
Sbjct: 101 GYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFK 160
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
++ NSVS NA+I+ + ++ D+ A L M + V +M AG +L+
Sbjct: 161 EIS-EPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV---TMDAGTFAPLLTLLDDP 216
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
+F ++ +K +L + + C N++I Y
Sbjct: 217 MFCNLLKQVHAKVLKLGLQHEITIC----------------------------NAMISSY 248
Query: 255 SRCGSMEEATLIFQEM-ATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITY 313
+ CGS+ +A +F + ++DL+S+N++I+G + H +L +M+ +E D TY
Sbjct: 249 ADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTY 308
Query: 314 IGILTACS-------------------------------------HAGLLEEGQKVFESI 336
G+L+ACS G +E+ +FES+
Sbjct: 309 TGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL 368
Query: 337 KVPDVDHYACMIDMLGRVGKLEEAMKL---IHSMPMEPHAGIYGSLLNATRIHKQVELGE 393
K D+ + +I + G E+A+K + S ++ + +LL + ++LG+
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 394 LAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKIT-AWS 445
A + SN ++S++ + + + + R ++ K T AW+
Sbjct: 429 QIHA--LATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWN 479
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N ++ +Y + G L +A LF++MP+RD+VSWN+MI+GY G+ A LF M + S
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM-KRSGS 97
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
D + + + LG ++ + + ++ +SL+ MY++C +E+A
Sbjct: 98 DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFE 157
Query: 266 IFQEMATRDLVSYNTLISGL 285
F+E++ + VS+N LI+G
Sbjct: 158 AFKEISEPNSVSWNALIAGF 177
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 137/436 (31%), Positives = 229/436 (52%), Gaps = 60/436 (13%)
Query: 28 ARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM-LSSGNEPDETTWVTVISSCS 86
AR FD+MPE V+ W A+LS ++++ E + LF M G PD +T+ TV+++C
Sbjct: 217 ARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACG 276
Query: 87 SLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSV 143
+L R+L K +EI +L G+ N V
Sbjct: 277 NL----------RRL-------------------------KQGKEIHGKLITNGIGSNVV 301
Query: 144 SCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTN 203
++++ Y + G + AR +FN M ++++VSW++++ GY QNGE AI++F+EM
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM---- 357
Query: 204 DSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG----YNSLIFMYSRCGS 259
+ D +V AC L ++ LG I +Y ++ G ++LI +Y + G
Sbjct: 358 -EEKDLYCFGTVLKACAGLAAVRLG---KEIHGQY-VRRGCFGNVIVESALIDLYGKSGC 412
Query: 260 MEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTA 319
++ A+ ++ +M+ R+++++N ++S LA +G G E + + M + GI+PD I++I ILTA
Sbjct: 413 IDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTA 472
Query: 320 CSHAGLLEEGQKVF------ESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHA 373
C H G+++EG+ F IK P +HY+CMID+LGR G EEA L+ A
Sbjct: 473 CGHTGMVDEGRNYFVLMAKSYGIK-PGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDA 531
Query: 374 GIYGSLLNATRIHKQV-ELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNI 432
++G LL + + E A ++ +EP +YVLLSN+Y GR + N+R +
Sbjct: 532 SLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKL 591
Query: 433 MRKQGVKKITAWSWVE 448
M ++GV K SW++
Sbjct: 592 MVRRGVAKTVGQSWID 607
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 204/468 (43%), Gaps = 81/468 (17%)
Query: 4 EPQRNVVTWTTMVTGYAKSG-NLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
E RNV ++++ Y K G ++ R FD + +SW +M+SGY ++ + +
Sbjct: 93 ETDRNV--GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEV 150
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F +M+S G + +E T + + +CS LG+ L + F N+F+ + L ++
Sbjct: 151 FVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY-- 208
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
GV R V AR +F++MPE D + W ++++
Sbjct: 209 --------------GVNREPVD----------------ARRVFDEMPEPDVICWTAVLSA 238
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL 242
+++N A+ LF M PD T +V +ACG+L L G L I
Sbjct: 239 FSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGS 298
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+++ +SL+ MY +CGS+ EA +F M+ ++ VS++ L+ G +G + I++ +M+
Sbjct: 299 NVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME 358
Query: 303 EDGIEPDRITYIGILTACS-----------------------------------HAGLLE 327
E D + +L AC+ +G ++
Sbjct: 359 EK----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCID 414
Query: 328 EGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPHAGIYGSLLNATR 384
+V+ + + ++ + M+ L + G+ EEA+ + M ++P + ++L A
Sbjct: 415 SASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACG 474
Query: 385 IHKQVELGE---LAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNV 429
V+ G + AK + ++P + +Y + ++ AG ++E N+
Sbjct: 475 HTGMVDEGRNYFVLMAKSYGIKP-GTEHYSCMIDLLGRAGLFEEAENL 521
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 240/452 (53%), Gaps = 45/452 (9%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
Q +V+ T +V Y K + A FD+M ++ VSW AM+SG + V LF
Sbjct: 182 QESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRA 241
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKF----HSNYFVKTALLDMHA 121
M P+ T ++V+ +C L S+V+++ F H++ + A + M+
Sbjct: 242 MQRENLRPNRVTLLSVLPACVELN---YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
+CGN+ ++ +F+ V R+ V ++MIS YA GD S +L N+M
Sbjct: 299 RCGNVSLSRVLFETSKV-RDVVMWSSMISGYAETGDCSEVMNLLNQMR------------ 345
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
KE I N +T++++ SAC + LS S + +
Sbjct: 346 ---------------KEGIEANS-----VTLLAIVSACTNSTLLSFASTVHSQILKCGFM 385
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
IL N+LI MY++CGS+ A +F E+ +DLVS++++I+ HGHG E +++ M
Sbjct: 386 SHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGM 445
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFES---IKVP-DVDHYACMIDMLGRVGKL 357
+ G E D + ++ IL+AC+HAGL+EE Q +F +P ++HYAC I++LGR GK+
Sbjct: 446 IKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKI 505
Query: 358 EEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVEL-GELAAAKLFTVEPHNSSNYVLLSNI 416
++A ++ +MPM+P A I+ SLL+A H ++++ G++ A +L EP N +NYVLLS I
Sbjct: 506 DDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKI 565
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
+ +G + VR +M+++ + K +S +E
Sbjct: 566 HTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 178/388 (45%), Gaps = 45/388 (11%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+ V ++++ YAK R FD+M R VS+ ++++ Q G E ++L +M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKV--KFHSNYFVKTALLDMHAKCGN 125
G P ++++ C+ +G + L V + + + TAL+DM+ K +
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
AA +FDQ+ V +N VS AMIS G
Sbjct: 201 HAAAFHVFDQMEV-KNEVSWTAMIS-------------------------------GCVA 228
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLG---SLSLGIWAVSILNEYQIKL 242
N M + LF+ M N +P+ +T++SV AC L SL I S +
Sbjct: 229 NQNYEMGVDLFRAMQREN-LRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADE 287
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+ + + MY RCG++ + ++F+ RD+V ++++ISG A G E + L+++M+
Sbjct: 288 RLTA--AFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESI-KVPDVDHYA---CMIDMLGRVGKLE 358
++GIE + +T + I++AC+++ LL V I K + H +IDM + G L
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLS 405
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIH 386
A ++ + + E + S++NA +H
Sbjct: 406 AAREVFYELT-EKDLVSWSSMINAYGLH 432
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 47/293 (16%)
Query: 116 LLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVS 175
LL C LKA + ++V N++IS YA+ R +F++M RDTVS
Sbjct: 64 LLGAQLHCLCLKAGADC--------DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVS 115
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLS--LGIWAVS 233
+ S+I Q+G A+KL KEM EL + S+ + C +GS S ++
Sbjct: 116 YCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSEL-VASLLALCTRMGSSSKVARMFHAL 174
Query: 234 ILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIE 293
+L + +++ S+L +L+ MY + A +F +M ++ VS+ +ISG ++ +
Sbjct: 175 VLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEM 234
Query: 294 CIKLISKMKEDGIEPDRITYIGILTAC---------------------SHA--------- 323
+ L M+ + + P+R+T + +L AC HA
Sbjct: 235 GVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFM 294
Query: 324 ------GLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME 370
G + + +FE+ KV DV ++ MI G E M L++ M E
Sbjct: 295 TMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE 347
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 134/440 (30%), Positives = 222/440 (50%), Gaps = 38/440 (8%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
++ T Y + G ++ F+ M ER VVSW +++ Y + G ++ V F M +S P
Sbjct: 249 SLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPP 308
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF 133
+E T+ ++ S+C+SL E + H N
Sbjct: 309 NEQTFASMFSACASLSRLVWGE---------QLHCNVL---------------------- 337
Query: 134 DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAI 193
LG+ + N+M+ Y+ G+L A LF M RD +SW+++I GY Q G
Sbjct: 338 -SLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGF 396
Query: 194 KLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFM 253
K F M + +KP + + S+ S G++ + G ++ + ++ + +SLI M
Sbjct: 397 KYFSWM-RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 254 YSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITY 313
YS+CGS++EA++IF E D+VS +I+G A HG E I L K + G PD +T+
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTF 515
Query: 314 IGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
I +LTAC+H+G L+ G F ++ P +HY CM+D+L R G+L +A K+I+ M
Sbjct: 516 ISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMS 575
Query: 369 MEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGN 428
+ ++ +LL A + +E G AA ++ ++P ++ V L+NIY+ G +E N
Sbjct: 576 WKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAAN 635
Query: 429 VRNIMRKQGVKKITAWSWVE 448
VR M+ +GV K WS ++
Sbjct: 636 VRKNMKAKGVIKEPGWSSIK 655
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 190/474 (40%), Gaps = 82/474 (17%)
Query: 22 SGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM--LSSGNEPDETTWV 79
+GNL+ AR FDKMP +VSW +++ Y + + E + LF+ M + PD +
Sbjct: 53 AGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS 112
Query: 80 TVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVY 139
V+ +C + ES+ K S+ +V ++LLDM+ + G + + +F +
Sbjct: 113 VVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSE---- 168
Query: 140 RNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEM 199
MP R+ V+W ++I G G + F EM
Sbjct: 169 ----------------------------MPFRNAVTWTAIITGLVHAGRYKEGLTYFSEM 200
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYSRC 257
S ++ D T AC L + G I I+ + L + NSL MY+ C
Sbjct: 201 -SRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVA--NSLATMYTEC 257
Query: 258 GSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGIL 317
G M++ +F+ M+ RD+VS+ +LI G ++ ++ KM+ + P+ T+ +
Sbjct: 258 GEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMF 317
Query: 318 TACSHAGLLEEGQK-----------------------------------VFESIKVPDVD 342
+AC+ L G++ +F+ ++ D+
Sbjct: 318 SACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDII 377
Query: 343 HYACMIDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNATRIHKQVELGEL--AAA 397
++ +I + G EE K M +P SLL+ + +E G A A
Sbjct: 378 SWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALA 437
Query: 398 KLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAW--SWVEH 449
F +E NS+ L N+Y+ G KE + + + +TA + EH
Sbjct: 438 LCFGLE-QNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEH 490
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 13/257 (5%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEM-ISTND 204
N+ + + G+L AR +F+KMP D VSW S+I Y S A+ LF M + +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 205 SKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY----NSLIFMYSRCGSM 260
PD + V ACG +++ G L+ Y +K S+L +SL+ MY R G +
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYG----ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKI 159
Query: 261 EEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTAC 320
+++ +F EM R+ V++ +I+GL G E + S+M D T+ L AC
Sbjct: 160 DKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKAC 219
Query: 321 SHAGLLEEGQKVFESIKVPDVDHYACMID----MLGRVGKLEEAMKLIHSMPMEPHAGIY 376
+ ++ G+ + + V C+ + M G++++ + L +M
Sbjct: 220 AGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWT 279
Query: 377 GSLLNATRIHKQVELGE 393
++ RI ++V+ E
Sbjct: 280 SLIVAYKRIGQEVKAVE 296
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 145/345 (42%), Gaps = 83/345 (24%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R++++W+T++ G Y Q+G E + F+ M
Sbjct: 374 RDIISWSTIIGG-------------------------------YCQAGFGEEGFKYFSWM 402
Query: 67 LSSGNEPDETTWVTVISSCSSL-----GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
SG +P + +++S ++ G A ++ L++ N V+++L++M++
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ-----NSTVRSSLINMYS 457
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
KCG++K A IF + + VS AMI+ YA G A DLF K S+
Sbjct: 458 KCGSIKEASMIFGETD-RDDIVSLTAMINGYAEHGKSKEAIDLFEK----------SLKV 506
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQI 240
G+ +PD +T +SV +AC H G L LG +++ E Y +
Sbjct: 507 GF----------------------RPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNM 544
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHGHGIECIKLIS 299
+ + Y ++ + R G + +A + EM+ +D V + TL+ + G I+
Sbjct: 545 RPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGD----IERGR 600
Query: 300 KMKEDGIEPDRITYIGILTAC---SHAGLLEEGQKVFESIKVPDV 341
+ E +E D ++T S G LEE V +++K V
Sbjct: 601 RAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGV 645
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 106/219 (48%), Gaps = 33/219 (15%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
++N ++++ Y+K G++K A + F + +VS AM++GYA+ G + E + LF
Sbjct: 443 EQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEK 502
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
L G PD T+++V+++C+ G +LD + FH YF +M + N
Sbjct: 503 SLKVGFRPDSVTFISVLTACTHSG----------QLD-LGFH--YF------NMMQETYN 543
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP-ERDTVSWNSMIAGYA 184
++ A+E + M+ R G LS A + N+M ++D V W +++
Sbjct: 544 MRPAKEHY------------GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACK 591
Query: 185 QNGESLMAIKLFKEMISTNDSKPDEL-TMVSVFSACGHL 222
G+ + + ++ + + L T+ +++S+ G+L
Sbjct: 592 AKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNL 630
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 132/456 (28%), Positives = 235/456 (51%), Gaps = 40/456 (8%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
EP++ ++ ++ + K G + AR FD++PER++ S+ +++SG+ G +E LF
Sbjct: 155 EPEQYMMNRILLM--HVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELF 212
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M ++ + T+ ++ + + LG + + + K+ N FV L+DM
Sbjct: 213 KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDM---- 268
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
Y++ GD+ AR F MPE+ TV+WN++IAGY
Sbjct: 269 ----------------------------YSKCGDIEDARCAFECMPEKTTVAWNNVIAGY 300
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
A +G S A+ L +M + S D+ T+ + L L L A + L +
Sbjct: 301 ALHGYSEEALCLLYDMRDSGVS-IDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE 359
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
I+ +L+ YS+ G ++ A +F ++ ++++S+N L+ G A+HG G + +KL KM
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA 419
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLE 358
+ P+ +T++ +L+AC+++GL E+G ++F S+ P HYACMI++LGR G L+
Sbjct: 420 ANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLD 479
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
EA+ I P++ ++ +LLNA R+ + +ELG + A KL+ + P NYV++ N+Y
Sbjct: 480 EAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYN 539
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
G+ E V + +G+ + A +WVE H
Sbjct: 540 SMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTH 575
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 66/309 (21%)
Query: 82 ISSCSSLGDPCLAESIVRKLDKV-------KFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
+S+ +L + C+ +R + +V F ++ +L MH KCG + A+ +FD
Sbjct: 123 VSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFD 182
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
++ PER+ S+ S+I+G+ G + A +
Sbjct: 183 EI--------------------------------PERNLYSYYSIISGFVNFGNYVEAFE 210
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN----SL 250
LFK M+ S + T + A LGS+ +G L+ +KL ++ L
Sbjct: 211 LFK-MMWEELSDCETHTFAVMLRASAGLGSIYVG----KQLHVCALKLGVVDNTFVSCGL 265
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
I MYS+CG +E+A F+ M + V++N +I+G A HG+ E + L+ M++ G+ D+
Sbjct: 266 IDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQ 325
Query: 311 ITY---IGI--------LTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEE 359
T I I LT +HA L+ G FES V + ++D + G+++
Sbjct: 326 FTLSIMIRISTKLAKLELTKQAHASLIRNG---FESEIVAN----TALVDFYSKWGRVDT 378
Query: 360 AMKLIHSMP 368
A + +P
Sbjct: 379 ARYVFDKLP 387
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 221 bits (563), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 247/501 (49%), Gaps = 57/501 (11%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPE----RSVVSWNAMLSGYAQSGAALETVRLFN 64
+VTW ++ GY + G A KM V +W AM+SG +G + + +F
Sbjct: 282 LVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFR 341
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M +G P+ T ++ +S+CS L + K+ F + V +L+DM++KCG
Sbjct: 342 KMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCG 401
Query: 125 NLKAAQEIFDQL---GVYR-------------------------------NSVSCNAMIS 150
L+ A+++FD + VY N ++ N MIS
Sbjct: 402 KLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 151 AYARLGDLSFARDLFNKMP-----ERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
Y + GD A DLF +M +R+T +WN +IAGY QNG+ A++LF++M +
Sbjct: 462 GYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM-QFSRF 520
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY----NSLIFMYSRCGSME 261
P+ +T++S+ AC +L LG V ++ ++ ++ N+L Y++ G +E
Sbjct: 521 MPNSVTILSLLPACANL----LGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 262 EATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS 321
+ IF M T+D++++N+LI G HG + L ++MK GI P+R T I+ A
Sbjct: 577 YSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHG 636
Query: 322 HAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIY 376
G ++EG+KVF SI +P ++H + M+ + GR +LEEA++ I M ++ I+
Sbjct: 637 LMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIW 696
Query: 377 GSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQ 436
S L RIH +++ AA LF++EP N++ ++S IYAL + R
Sbjct: 697 ESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDN 756
Query: 437 GVKKITAWSWVEHPSHVHCET 457
+KK SW+E + +H T
Sbjct: 757 LLKKPLGQSWIEVRNLIHTFT 777
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 199/428 (46%), Gaps = 49/428 (11%)
Query: 1 MMGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETV 60
+ EP +V T +++ YAK G + AR FD M ER++ +W+AM+ Y++ E
Sbjct: 109 LFTEP--DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 61 RLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
+LF M+ G PD+ + ++ C++ GD + I + K+ S V ++L ++
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 121 AKCGNLKAAQEIFDQL----------------------------------GVYRNSVSCN 146
AKCG L A + F ++ G+ V+ N
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 147 AMISAYARLGDLSFARDLFNKMPE----RDTVSWNSMIAGYAQNGESLMAIKLFKEMIST 202
+I Y +LG A DL KM D +W +MI+G NG A+ +F++M
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLA 346
Query: 203 NDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEE 262
P+ +T++S SAC L ++ G SI + +L NSL+ MYS+CG +E+
Sbjct: 347 G-VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 263 ATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSH 322
A +F + +D+ ++N++I+G G+ + +L ++M++ + P+ IT+ +++
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 323 AGLLEEGQKVFESIKVP-----DVDHYACMIDMLGRVGKLEEAMKLIHSMPME---PHAG 374
G E +F+ ++ + + +I + GK +EA++L M P++
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 375 IYGSLLNA 382
SLL A
Sbjct: 526 TILSLLPA 533
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 17/296 (5%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRL 62
++V TW +M+TGY ++G A F +M + ++++WN M+SGY ++G E + L
Sbjct: 416 KDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDL 475
Query: 63 FNDMLSSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
F M G + + TW +I+ G A + RK+ +F N +L +
Sbjct: 476 FQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPN---SVTILSLLP 532
Query: 122 KCGNLKAAQEIFDQLG-VYRNSVSC-----NAMISAYARLGDLSFARDLFNKMPERDTVS 175
C NL A+ + + G V R ++ NA+ YA+ GD+ ++R +F M +D ++
Sbjct: 533 ACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIIT 592
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SI 234
WNS+I GY +G A+ LF +M T P+ T+ S+ A G +G++ G SI
Sbjct: 593 WNSLIGGYVLHGSYGPALALFNQM-KTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSI 651
Query: 235 LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS-YNTLISGLASHG 289
N+Y I ++ ++++++Y R +EEA QEM + + + ++G HG
Sbjct: 652 ANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHG 707
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 236/467 (50%), Gaps = 19/467 (4%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N+ +++ Y + G + AR FD+M ER VSWNA+++ Y E +L + M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SG E TW T+ C G+ A + V + A+++ C ++
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG---SVAMINGLKACSHIG 334
Query: 128 AAQ--EIFDQLGVYRNSVSC------NAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
A + ++F L + S S N++I+ Y+R DL A +F ++ +WNS+
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSI 394
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEY 238
I+G+A N S L KEM+ + P+ +T+ S+ +G+L G + IL
Sbjct: 395 ISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
K ++ +NSL+ MY++ G + A +F M RD V+Y +LI G G G +
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGR 353
M GI+PD +T + +L+ACSH+ L+ EG +F ++ ++HY+CM+D+ R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 354 VGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAK-LFTVEPHNSSNYVL 412
G L++A + H++P EP + + +LL A IH +GE AA K L +P + +Y+L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 413 LSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVHCETIK 459
L+++YA+ G W ++ V+ ++ GV+K ++ +E S + E K
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELDGENNK 680
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 178/395 (45%), Gaps = 44/395 (11%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+VT Y+ L A+ + + WN ++ Y ++ E+V ++ M+S G D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
E T+ +VI +C++L D + ++ N +V AL+ M+ + G + A+ +FD
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM----PERDTVSWNSMIAGYAQNGESL 190
++ R++VS NA+I+ Y L A L ++M E V+WN++ G + G +
Sbjct: 244 RMS-ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQIKLSILGY-N 248
A+ M + N + + M++ AC H+G+L G ++ ++ I N
Sbjct: 303 GALNCVVGMRNCN-VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN 361
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEP 308
SLI MYSRC + A ++FQ++ L ++N++ISG A + E L+ +M G P
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHP 421
Query: 309 DRITYIGILTACSHAGLLEEG------------------------------------QKV 332
+ IT IL + G L+ G ++V
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV 481
Query: 333 FESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
F+S++ D Y +ID GR+GK E A+ M
Sbjct: 482 FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 236/467 (50%), Gaps = 19/467 (4%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N+ +++ Y + G + AR FD+M ER VSWNA+++ Y E +L + M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SG E TW T+ C G+ A + V + A+++ C ++
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIG---SVAMINGLKACSHIG 334
Query: 128 AAQ--EIFDQLGVYRNSVSC------NAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
A + ++F L + S S N++I+ Y+R DL A +F ++ +WNS+
Sbjct: 335 ALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSI 394
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILNEY 238
I+G+A N S L KEM+ + P+ +T+ S+ +G+L G + IL
Sbjct: 395 ISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
K ++ +NSL+ MY++ G + A +F M RD V+Y +LI G G G +
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGR 353
M GI+PD +T + +L+ACSH+ L+ EG +F ++ ++HY+CM+D+ R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 354 VGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAK-LFTVEPHNSSNYVL 412
G L++A + H++P EP + + +LL A IH +GE AA K L +P + +Y+L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 413 LSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVHCETIK 459
L+++YA+ G W ++ V+ ++ GV+K ++ +E S + E K
Sbjct: 634 LADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDSELDGENNK 680
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 178/395 (45%), Gaps = 44/395 (11%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+VT Y+ L A+ + + WN ++ Y ++ E+V ++ M+S G D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
E T+ +VI +C++L D + ++ N +V AL+ M+ + G + A+ +FD
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM----PERDTVSWNSMIAGYAQNGESL 190
++ R++VS NA+I+ Y L A L ++M E V+WN++ G + G +
Sbjct: 244 RMS-ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYI 302
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQIKLSILGY-N 248
A+ M + N + + M++ AC H+G+L G ++ ++ I N
Sbjct: 303 GALNCVVGMRNCN-VRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRN 361
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEP 308
SLI MYSRC + A ++FQ++ L ++N++ISG A + E L+ +M G P
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHP 421
Query: 309 DRITYIGILTACSHAGLLEEG------------------------------------QKV 332
+ IT IL + G L+ G ++V
Sbjct: 422 NHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRV 481
Query: 333 FESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
F+S++ D Y +ID GR+GK E A+ M
Sbjct: 482 FDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM 516
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 230/456 (50%), Gaps = 40/456 (8%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F ER+ NA++ G ++ +VR F ML G +PD T+ V+ S S LG
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQ---------------- 135
L ++ K + FV+ +L+DM+AK G LK A ++F++
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 136 LGVY------------------RNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWN 177
+ Y RNS S + +I Y G+L+ A+ LF MPE++ VSW
Sbjct: 203 INGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWT 262
Query: 178 SMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE 237
++I G++Q G+ AI + EM+ KP+E T+ +V SAC G+L GI + +
Sbjct: 263 TLINGFSQTGDYETAISTYFEMLEKG-LKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 238 YQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKL 297
IKL +L+ MY++CG ++ A +F M +D++S+ +I G A HG + I+
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 298 ISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLG 352
+M G +PD + ++ +LTAC ++ ++ G F+S+++ P + HY ++D+LG
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLG 441
Query: 353 RVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVL 412
R GKL EA +L+ +MP+ P + +L A + HK E + L ++P +Y+
Sbjct: 442 RAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIF 501
Query: 413 LSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
L +A G ++V R ++K+ ++ WS++E
Sbjct: 502 LDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIE 537
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 147/293 (50%), Gaps = 49/293 (16%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+RN +W+T++ GY SG L A+ F+ MPE++VVSW +++G++Q+G + +
Sbjct: 223 PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 65 DMLSSGNEPDETTWVTVISSCS---SLGDPCLAESIVR----KLDKVKFHSNYFVKTALL 117
+ML G +P+E T V+S+CS +LG + KLD+ + TAL+
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRA-------IGTALV 335
Query: 118 DMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWN 177
DM+AKCG L A + F+ M +D +SW
Sbjct: 336 DMYAKCGELDCAATV--------------------------------FSNMNHKDILSWT 363
Query: 178 SMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI-WAVSILN 236
+MI G+A +G AI+ F++M+ + + KPDE+ ++V +AC + + LG+ + S+
Sbjct: 364 AMIQGWAVHGRFHQAIQCFRQMMYSGE-KPDEVVFLAVLTACLNSSEVDLGLNFFDSMRL 422
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASH 288
+Y I+ ++ Y ++ + R G + EA + + M DL ++ L +H
Sbjct: 423 DYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 475
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 136/443 (30%), Positives = 237/443 (53%), Gaps = 49/443 (11%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER--SVVSWNAMLSGYAQSGAALETVRLF 63
+ N+ + +V YA G + A FD+M +R S +WN+++SGYA+ G + + L+
Sbjct: 124 RNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY 183
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M G +PD T+ V+ +C +G + E+I R L K F + +V AL+ M+AKC
Sbjct: 184 FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKC 243
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G++ A+ +FD + +++ VS N+M++ Y G L A D+F M
Sbjct: 244 GDIVKARNVFDMIP-HKDYVSWNSMLTGYLHHGLLHEALDIFRLM--------------- 287
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS-ACGHLGSLSLGIWAVSILNEYQIKL 242
QNG +PD++ + SV + L W + E+++ +
Sbjct: 288 VQNG-----------------IEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSV 330
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
+ N+LI +YS+ G + +A IF +M RD VS+N +IS + + +G +K +M
Sbjct: 331 A----NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMH 383
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKL 357
+PD IT++ +L+ C++ G++E+G+++F + P ++HYACM+++ GR G +
Sbjct: 384 RANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMM 443
Query: 358 EEAMKLI-HSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
EEA +I M +E ++G+LL A +H ++GE+AA +LF +EP N N+ LL I
Sbjct: 444 EEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRI 503
Query: 417 YALAGRWKEVGNVRNIMRKQGVK 439
Y+ A R ++V VR +M +G++
Sbjct: 504 YSKAKRAEDVERVRQMMVDRGLE 526
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 136/454 (29%), Positives = 233/454 (51%), Gaps = 43/454 (9%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N+ T++ Y+K F +M ++ ++SW +++GYAQ+ +E + LF D+
Sbjct: 420 NLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVA 479
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
E DE LG A S+++ + VK + ++ LLD
Sbjct: 480 KKRMEIDEMI----------LGSILRASSVLKSMLIVKEIHCHILRKGLLD--------- 520
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+V N ++ Y + ++ +A +F + +D VSW SMI+ A NG
Sbjct: 521 --------------TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNG 566
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSIL 245
A++LF+ M+ T S D + ++ + SA L +L+ G I + + ++ SI
Sbjct: 567 NESEAVELFRRMVETGLS-ADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIA 625
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
+++ MY+ CG ++ A +F + + L+ Y ++I+ HG G ++L KM+ +
Sbjct: 626 --VAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN 683
Query: 306 IEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEA 360
+ PD I+++ +L ACSHAGLL+EG+ + ++ P +HY C++DMLGR + EA
Sbjct: 684 VSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEA 743
Query: 361 MKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALA 420
+ + M EP A ++ +LL A R H + E+GE+AA +L +EP N N VL+SN++A
Sbjct: 744 FEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQ 803
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
GRW +V VR M+ G++K SW+E VH
Sbjct: 804 GRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVH 837
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 148/307 (48%), Gaps = 35/307 (11%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
+V Y K G+L A FD+MP+R+ +WN M+ Y +G + L+ +M G
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
+++ ++ +C+ L D + L K+ +HS F+ AL+ M+AK +L AA+ +FD
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
+ GD V WNS+++ Y+ +G+SL ++
Sbjct: 242 ----------------GFQEKGD---------------AVLWNSILSSYSTSGKSLETLE 270
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIF 252
LF+EM T + P+ T+VS +AC LG I A S+L + N+LI
Sbjct: 271 LFREMHMTGPA-PNSYTIVSALTACDGFSYAKLGKEIHA-SVLKSSTHSSELYVCNALIA 328
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
MY+RCG M +A I ++M D+V++N+LI G + E ++ S M G + D ++
Sbjct: 329 MYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVS 388
Query: 313 YIGILTA 319
I+ A
Sbjct: 389 MTSIIAA 395
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 116/264 (43%), Gaps = 41/264 (15%)
Query: 111 FVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE 170
F+ L+ M+ KCG+L A+++FD+ MP+
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDE--------------------------------MPD 144
Query: 171 RDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDEL-TMVSVFSACGHLGSLSLGI 229
R +WN+MI Y NGE A+ L+ M + P L + ++ AC L + G
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNM--RVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 230 WAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASH 288
S+L + + N+L+ MY++ + A +F + D V +N+++S ++
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 289 GHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI---KVPDVDHYA 345
G +E ++L +M G P+ T + LTAC + G+++ S+ + Y
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 346 C--MIDMLGRVGKLEEAMKLIHSM 367
C +I M R GK+ +A +++ M
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQM 346
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 183/299 (61%), Gaps = 12/299 (4%)
Query: 161 ARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACG 220
AR +F+++P+ D V W+ ++ GY + G +++F+EM+ +PDE ++ + +AC
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREML-VKGLEPDEFSVTTALTACA 229
Query: 221 HLGSLSLGIWAVSILNEYQ-IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYN 279
+G+L+ G W + + I+ + +L+ MY++CG +E A +F+++ R++ S+
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 280 TLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK- 337
LI G A++G+ + + + ++ +EDGI+PD + +G+L AC+H G LEEG+ + E+++
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 338 ----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGE 393
P +HY+C++D++ R G+L++A+ LI MPM+P A ++G+LLN R HK VELGE
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGE 409
Query: 394 LAAAKLFTVEPHN----SSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
LA L +E N + V LSNIY R E VR ++ ++GV+K WS +E
Sbjct: 410 LAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLE 468
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 135/279 (48%), Gaps = 35/279 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T ++ Y + L AR FD++P+ VV W+ +++GY + G E + +F +ML G E
Sbjct: 156 TGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE 215
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKF-HSNYFVKTALLDMHAKCGNLKAAQE 131
PDE + T +++C+ +G + I + K + S+ FV TAL+DM+AKCG ++ A E
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+F +L R+ SW ++I GYA G +
Sbjct: 276 VFKKL--------------------------------TRRNVFSWAALIGGYAAYGYAKK 303
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN-EYQIKLSILGYNSL 250
A+ + + + KPD + ++ V +AC H G L G + + Y+I Y+ +
Sbjct: 304 AMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCI 363
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVS-YNTLISGLASH 288
+ + R G +++A + ++M + L S + L++G +H
Sbjct: 364 VDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLS----FARDLFNKMPERDTVSWNSMI 180
+K+ +F G++RN+ + + +++A+ L +L+ +A +F+ + ++ +++MI
Sbjct: 26 QIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMI 85
Query: 181 AGYAQNGESLMAIKLFKEMISTN--DSKPDELTMVSVFSACGHLGSLSLG----IWAVS- 233
+++ + + ++ F M+ D P LT + AC S+G W V
Sbjct: 86 RICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKN 145
Query: 234 --ILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHG 291
L++ ++ +L +Y + +A +F E+ D+V ++ L++G G G
Sbjct: 146 GVFLSDSHVQTGVLR------IYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP-----DVDHYAC 346
E +++ +M G+EPD + LTAC+ G L +G+ + E +K DV
Sbjct: 200 SEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTA 259
Query: 347 MIDMLGRVGKLEEAMKLIHSM 367
++DM + G +E A+++ +
Sbjct: 260 LVDMYAKCGCIETAVEVFKKL 280
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ +V T +V YAK G ++TA F K+ R+V SW A++ GYA G A + +
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLER 310
Query: 66 M-LSSGNEPDETTWVTVISSCSSLG----DPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
+ G +PD + V+++C+ G + E++ + + H +Y + ++D+
Sbjct: 311 LEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY---SCIVDLM 367
Query: 121 AKCGNLKAAQEIFDQL 136
+ G L A + +++
Sbjct: 368 CRAGRLDDALNLIEKM 383
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/464 (29%), Positives = 231/464 (49%), Gaps = 55/464 (11%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
++ VT+T M+T Y G + +A F + E++ +++NA+++G+ ++G L+ ++LF DM
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDM 408
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
L G E + + + + +C + + ++E I K N ++TALLDM +C +
Sbjct: 409 LQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERM 468
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
A+E+FDQ +S + + S+I GYA+N
Sbjct: 469 ADAEEMFDQWPSNLDS------------------------------SKATTSIIGGYARN 498
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL- 245
G A+ LF + DE+++ + + CG LG +G YQI L
Sbjct: 499 GLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG---------YQIHCYALK 549
Query: 246 -GY-------NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKL 297
GY NSLI MY++C ++A IF M D++S+N+LIS +G E + L
Sbjct: 550 AGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALAL 609
Query: 298 ISKMKEDGIEPDRITYIGILTACSH--AGLLEEGQKVFESIKV-----PDVDHYACMIDM 350
S+M E I+PD IT +++A + + L + +F S+K P +HY + +
Sbjct: 610 WSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRV 669
Query: 351 LGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNY 410
LG G LEEA I+SMP++P + +LL++ RIH + + A + + +P S Y
Sbjct: 670 LGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEY 729
Query: 411 VLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+L SNIY+ +G W +R MR++G +K A SW+ H + +H
Sbjct: 730 ILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIH 773
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 176/400 (44%), Gaps = 86/400 (21%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSG-NEP 73
+++ Y K G + A + F + +VVS+ A++SG+++ +E +++F M +G +P
Sbjct: 120 LISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQP 179
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF 133
+E T+V ++++C + L I + K F ++ FV +L+ ++ K
Sbjct: 180 NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDK----------- 228
Query: 134 DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAI 193
+ SC+ ++ LF+++P+RD SWN++++ + G+S A
Sbjct: 229 ------DSGSSCDDVLK-------------LFDEIPQRDVASWNTVVSSLVKEGKSHKAF 269
Query: 194 KLFKEMISTNDSKPDELTMVSVFSAC-------------------GHLGSLS-----LGI 229
LF EM D T+ ++ S+C G + LS +G
Sbjct: 270 DLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGF 329
Query: 230 WA-------VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLI 282
++ V L E + + + +I Y G ++ A IF + ++ ++YN L+
Sbjct: 330 YSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALM 389
Query: 283 SGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVD 342
+G +GHG++ +KL + M + G+E + + AC GL+ E +KV E I
Sbjct: 390 AGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVSE-KKVSEQI------ 439
Query: 343 HYAC--------------MIDMLGRVGKLEEAMKLIHSMP 368
H C ++DM R ++ +A ++ P
Sbjct: 440 HGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 161/370 (43%), Gaps = 39/370 (10%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
PQR+V +W T+V+ K G A FD E + V
Sbjct: 245 PQRDVASWNTVVSSLVKEGKSHKA---FDLFYEMNRV----------------------- 278
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
G D T T++SSC+ + + ++ V AL+ ++K
Sbjct: 279 ----EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFW 334
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
++K + +++ + + +++V+ MI+AY G + A ++F + E++T+++N+++AG+
Sbjct: 335 DMKKVESLYEMM-MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFC 393
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
+NG L A+KLF +M+ D ++ S ACG + + ++ +
Sbjct: 394 RNGHGLKALKLFTDMLQRGVELTD-FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNP 452
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNT--LISGLASHGHGIECIKLISK-M 301
+L+ M +RC M +A +F + + S T +I G A +G + + L + +
Sbjct: 453 CIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTL 512
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKV----FESIKVPDVDHYACMIDMLGRVGKL 357
E + D ++ IL C G E G ++ ++ D+ +I M +
Sbjct: 513 CEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDS 572
Query: 358 EEAMKLIHSM 367
++A+K+ ++M
Sbjct: 573 DDAIKIFNTM 582
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 100/190 (52%), Gaps = 3/190 (1%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
NA+IS Y +LG A +F + VS+ ++I+G+++ + A+K+F M
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSR--CGSMEEA 263
+P+E T V++ +AC + SLGI ++ + S+ NSL+ +Y + S ++
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 264 TLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTACSH 322
+F E+ RD+ S+NT++S L G + L +M + +G D T +L++C+
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 323 AGLLEEGQKV 332
+ +L G+++
Sbjct: 298 SSVLLRGREL 307
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 183/299 (61%), Gaps = 12/299 (4%)
Query: 161 ARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACG 220
AR +F+++P+ D V W+ ++ GY + G +++FKEM+ +PDE ++ + +AC
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEML-VRGIEPDEFSVTTALTACA 229
Query: 221 HLGSLSLGIWAVSILNEYQ-IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYN 279
+G+L+ G W + + + I+ + +L+ MY++CG +E A +F+++ R++ S+
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWA 289
Query: 280 TLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK- 337
LI G A++G+ + + ++ +EDGI+PD + +G+L AC+H G LEEG+ + E+++
Sbjct: 290 ALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Query: 338 ----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGE 393
P +HY+C++D++ R G+L++A+ LI MPM+P A ++G+LLN R HK VELGE
Sbjct: 350 RYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGE 409
Query: 394 LAAAKLFTVEPHN----SSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
LA L +E N + V LSNIY R E VR ++ ++G++K WS +E
Sbjct: 410 LAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLE 468
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 134/279 (48%), Gaps = 35/279 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T ++ Y + L AR FD++P+ VV W+ +++GY + G E + +F +ML G E
Sbjct: 156 TGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE 215
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKF-HSNYFVKTALLDMHAKCGNLKAAQE 131
PDE + T +++C+ +G + I + K ++ S+ FV TAL+DM+AKCG ++ A E
Sbjct: 216 PDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVE 275
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+F++L R+ SW ++I GYA G +
Sbjct: 276 VFEKL--------------------------------TRRNVFSWAALIGGYAAYGYAKK 303
Query: 192 AIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN-EYQIKLSILGYNSL 250
A + + KPD + ++ V +AC H G L G + + Y I Y+ +
Sbjct: 304 ATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCI 363
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVS-YNTLISGLASH 288
+ + R G +++A + ++M + L S + L++G +H
Sbjct: 364 VDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 125/261 (47%), Gaps = 24/261 (9%)
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLS----FARDLFNKMPERDTVSWNSMI 180
+K+ +F G++RN+ + + +++A+ L +L+ +A +F+ + ++ +++MI
Sbjct: 26 QIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMI 85
Query: 181 AGYAQNGESLMAIKLFKEMISTN--DSKPDELTMVSVFSACGHLGSLSLG----IWAVS- 233
+++ + + ++ F M+ D P LT + AC S+G W V
Sbjct: 86 RICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKN 145
Query: 234 --ILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHG 291
L++ ++ +L +Y + +A +F E+ D+V ++ L++G G G
Sbjct: 146 GVFLSDGHVQTGVLR------IYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLG 199
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP-----DVDHYAC 346
E +++ +M GIEPD + LTAC+ G L +G+ + E +K DV
Sbjct: 200 SEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTA 259
Query: 347 MIDMLGRVGKLEEAMKLIHSM 367
++DM + G +E A+++ +
Sbjct: 260 LVDMYAKCGCIETAVEVFEKL 280
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 33/179 (18%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ +V T +V YAK G ++TA F+K+ R+V SW A++ GYA G A + +
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDR 310
Query: 66 M-LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+ G +PD + V+++C+ G L E +T L +M A+ G
Sbjct: 311 IEREDGIKPDSVVLLGVLAACAHGG--FLEEG----------------RTMLENMEARYG 352
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVS-WNSMIAG 182
+ E + SC ++ R G L A DL KMP + S W +++ G
Sbjct: 353 -ITPKHEHY----------SC--IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 235/455 (51%), Gaps = 47/455 (10%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G + +V+ TM T Y+ + A F+ + E+ +V+WN M+S Y Q+ + +
Sbjct: 318 GYEKYTLVSNATM-TMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
+ M G +PDE T+ +++++ LD LD+
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLAT---------------SLD--------------LDV--- 404
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
L+ Q + G+ NA+ISAY++ G + A LF + ++ +SWN++I+G
Sbjct: 405 ---LEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISG 461
Query: 183 YAQNGESLMAIKLFKEMISTNDS-KPDELTMVSVFSACGHLGSLSLGIWA-VSILNEYQI 240
+ NG ++ F ++ + PD T+ ++ S C SL LG +L Q
Sbjct: 462 FYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQF 521
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
K +++G N+LI MYS+CG+++ + +F +M+ +D+VS+N+LIS + HG G +
Sbjct: 522 KETLIG-NALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKT 580
Query: 301 MKEDG-IEPDRITYIGILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRV 354
M+++G + PD T+ +L+ACSHAGL+EEG ++F S+ + +VDH++C++D+LGR
Sbjct: 581 MQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRA 640
Query: 355 GKLEEAMKL--IHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVL 412
G L+EA L I + ++ +L +A H ++LG++ A L E + S YV
Sbjct: 641 GHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQ 700
Query: 413 LSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWV 447
LSNIYA AG WKE R + G K SW+
Sbjct: 701 LSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWM 735
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 182/384 (47%), Gaps = 49/384 (12%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN-EPDETTWVTVISSCSSLGDPCLAESI 97
++++ N L+G +SG ++LF D+ PD+ + I++ L D +
Sbjct: 20 TLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQV 79
Query: 98 VRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG---VYRNSVSCNAMISAYAR 154
+ + V LL ++ + GNL + ++ FD++ VY S ++SA +
Sbjct: 80 HCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVY----SWTTLLSASFK 135
Query: 155 LGDLSFARDLFNKMPERDTVS-WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMV 213
LGD+ +A ++F+KMPERD V+ WN+MI G ++G +++LF+EM + D+
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLG-VRHDKFGFA 194
Query: 214 SVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQE--MA 271
++ S C + GSL G S++ + ++ N+LI MY C + +A L+F+E +A
Sbjct: 195 TILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 272 TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEE--- 328
RD V++N +I GLA E + + KM E + P +T++ ++ +CS A + +
Sbjct: 254 VRDQVTFNVVIDGLAGFKRD-ESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHG 312
Query: 329 -----------------------------GQKVFESIKVPDVDHYACMIDMLGRVGKLEE 359
KVFES++ D+ + MI + +
Sbjct: 313 LAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS 372
Query: 360 AM---KLIHSMPMEPHAGIYGSLL 380
AM K +H + ++P +GSLL
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLL 396
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 156/332 (46%), Gaps = 43/332 (12%)
Query: 2 MGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVS-WNAMLSGYAQSGAALETV 60
+ EP +V +WTT+++ K G+++ A FDKMPER V+ WNAM++G +SG +V
Sbjct: 118 IDEP--DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSV 175
Query: 61 RLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
LF +M G D+ + T++S C G + + + K F V AL+ M+
Sbjct: 176 ELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMY 234
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
C + A +F++ V RD V++N +I
Sbjct: 235 FNCQVVVDACLVFEETDV------------------------------AVRDQVTFNVVI 264
Query: 181 AGYA--QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
G A + ESL+ +F++M+ + +P +LT VSV +C ++ + ++I Y
Sbjct: 265 DGLAGFKRDESLL---VFRKMLEAS-LRPTDLTFVSVMGSCS-CAAMGHQVHGLAIKTGY 319
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
+ K +++ N+ + MYS A +F+ + +DLV++NT+IS G + +
Sbjct: 320 E-KYTLVS-NATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVY 377
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQ 330
+M G++PD T+ +L +LE Q
Sbjct: 378 KRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQ 409
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 125/382 (32%), Positives = 204/382 (53%), Gaps = 11/382 (2%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ +V ++ YAK GNL+ +R+ FD + ++++V WNA+LSGYA + + LF
Sbjct: 348 ETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPI-CLSLFLQ 406
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
ML G P E T+ T + SC L IVR + + N +V ++L+ +AK
Sbjct: 407 MLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVR----MGYEDNDYVLSSLMRSYAKNQL 462
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+ A + D + V N + Y+R G + L + + + DTVSWN IA ++
Sbjct: 463 MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR 522
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS-I 244
+ I+LFK M+ +N +PD+ T VS+ S C L L+LG ++ + +
Sbjct: 523 SDYHEEVIELFKHMLQSN-IRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADT 581
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
N LI MY +CGS+ +F+E ++L+++ LIS L HG+G E ++ +
Sbjct: 582 FVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSL 641
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEA 360
G +PDR+++I ILTAC H G+++EG +F+ +K P++DHY C +D+L R G L+EA
Sbjct: 642 GFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEA 701
Query: 361 MKLIHSMPMEPHAGIYGSLLNA 382
LI MP A ++ + L+
Sbjct: 702 EHLIREMPFPADAPVWRTFLDG 723
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 142/308 (46%), Gaps = 34/308 (11%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T ++ Y + L+ A F+ MP +S+ +WN M+S G E + F +++ G
Sbjct: 153 TCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGAS 212
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
E++++ V+ S V+ LD K +H C K +
Sbjct: 213 LTESSFLGVLK----------GVSCVKDLDISK------------QLH--CSATKKGLDC 248
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
++ V N++ISAY + G+ A +F D VSWN++I A++ L A
Sbjct: 249 --EISVV------NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKA 300
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
+KLF M S P++ T VSV + LS G +L + + I+ N+LI
Sbjct: 301 LKLFVSMPEHGFS-PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALID 359
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
Y++CG++E++ L F + +++V +N L+SG A+ G C+ L +M + G P T
Sbjct: 360 FYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQMLQMGFRPTEYT 418
Query: 313 YIGILTAC 320
+ L +C
Sbjct: 419 FSTALKSC 426
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 34/324 (10%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
V +++ Y K G + A FD+MPER+ VS+N ++ GY++ G + +F++M
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
G P+++T V+ + SC+SL + L F ++ FV T LL +
Sbjct: 109 FGYLPNQST-VSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCL--------- 158
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
Y RL L A +F MP + +WN M++ G
Sbjct: 159 -----------------------YGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGF 195
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
+ F+E++ S E + + V + L + + + I N
Sbjct: 196 LKECMFFFRELVRMGASLT-ESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEP 308
SLI Y +CG+ A +FQ+ + D+VS+N +I A + ++ +KL M E G P
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP 314
Query: 309 DRITYIGILTACSHAGLLEEGQKV 332
++ TY+ +L S LL G+++
Sbjct: 315 NQGTYVSVLGVSSLVQLLSCGRQI 338
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 130/292 (44%), Gaps = 50/292 (17%)
Query: 145 CNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTND 204
CN +IS Y +LG++S A +F++MPER+ VS+N++I GY++ G+ A +F EM
Sbjct: 52 CNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEM-RYFG 110
Query: 205 SKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNS-----LIFMYSRCGS 259
P++ T+ G L SL + A + L+ +K + ++ L+ +Y R
Sbjct: 111 YLPNQSTVS------GLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDL 164
Query: 260 MEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTA 319
+E A +F++M + L ++N ++S L G EC+ ++ G +++G+L
Sbjct: 165 LEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG 224
Query: 320 CS-----------HAGLLEEG------------------------QKVFESIKVPDVDHY 344
S H ++G +++F+ D+ +
Sbjct: 225 VSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSW 284
Query: 345 ACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNATRIHKQVELGE 393
+I + +A+KL SMP P+ G Y S+L + + + + G
Sbjct: 285 NAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGR 336
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 148/518 (28%), Positives = 232/518 (44%), Gaps = 78/518 (15%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSG-N 71
+++ Y K AR FD MPER+VVSW AM+ GY SG E ++LF M SG +
Sbjct: 73 NSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGES 132
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
P+E V SCS+ G + K S+ FV+ L+ M++ C A
Sbjct: 133 RPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIR 192
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWN-------------- 177
+ D L SV +A+ S Y G D+ K D V WN
Sbjct: 193 VLDDLPYCDLSVFSSAL-SGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFSNL 250
Query: 178 --------------------------SMIAGYAQNGESLMAIKLFKE------------- 198
++I Y + G+ L A ++F +
Sbjct: 251 RDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIM 310
Query: 199 --------------MISTNDSK---PDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
+ S D+K P+E T + ++ L L G ++ + +
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
++ N+L+ MY++ GS+E+A F M RD+V++NT+ISG + HG G E ++ +M
Sbjct: 371 NHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGK 356
G P+RIT+IG+L ACSH G +E+G F + PD+ HY C++ +L + G
Sbjct: 431 IFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGM 490
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
++A + + P+E + +LLNA + + LG+ A P++S YVLLSNI
Sbjct: 491 FKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNI 550
Query: 417 YALAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
+A + W+ V VR++M +GVKK SW+ + H
Sbjct: 551 HAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTH 588
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 190/316 (60%), Gaps = 18/316 (5%)
Query: 147 AMISAYARLGDLSFARDLFNKMPER-DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
+++ Y+ +GD+ +AR +F++ PE+ + V W +MI+ Y +N S+ AI+LFK M
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM-EAEKI 163
Query: 206 KPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEA 263
+ D + + SAC LG++ +G I++ SI + ++ + + NSL+ MY + G E+A
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 264 TLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK------EDGIEPDRITYIGIL 317
+F E +D+ +Y ++I G A +G E ++L KMK + I P+ +T+IG+L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 318 TACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPH 372
ACSH+GL+EEG++ F+S+ + P H+ CM+D+ R G L++A + I+ MP++P+
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPN 343
Query: 373 AGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNI 432
I+ +LL A +H VELGE ++F ++ + +YV LSNIYA G W E +R+
Sbjct: 344 TVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDR 403
Query: 433 MRKQGVKKITAWSWVE 448
+RK +++ SW+E
Sbjct: 404 VRK---RRMPGKSWIE 416
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 162/336 (48%), Gaps = 45/336 (13%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPER-SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN 71
T++V Y+ G++ AR FD+ PE+ ++V W AM+S Y ++ ++E + LF M +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 72 EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQE 131
E D +S+C+ LG + E I + K K + +D+ +
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRK-------RRLAMDLTLR--------- 207
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
N++++ Y + G+ AR LF++ +D ++ SMI GYA NG++
Sbjct: 208 --------------NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQE 253
Query: 192 AIKLFKEMISTNDSK-----PDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIKLSIL 245
+++LFK+M + + S+ P+++T + V AC H G + G S++ +Y +K
Sbjct: 254 SLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREA 313
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGH---GIECIKLISKM 301
+ ++ ++ R G +++A +M + + V + TL+ + HG+ G E + I ++
Sbjct: 314 HFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFEL 373
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
D + Y+ + + G+ +E K+ + ++
Sbjct: 374 DRDHVGD----YVALSNIYASKGMWDEKSKMRDRVR 405
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 143/478 (29%), Positives = 248/478 (51%), Gaps = 45/478 (9%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
+++ Y S +L+ A FD+MP+ V+SWN+++SGY QSG E + LF ++ S
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHS-NYFVKTALLDMHAKCGNLKAAQE 131
P+E ++ +++C+ L L I KL K+ N V L+DM+ KCG + A
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVL 213
Query: 132 IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLM 191
+F + +++VS NA++++ +R G L F++MP DTV++N +I + ++G+
Sbjct: 214 VFQHME-EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNN 272
Query: 192 AIKLFKEMISTNDS-------------KPDELT--MVSVFSACGHLGSLSLGI------- 229
A ++ +M + N S K E T + S+ SL I
Sbjct: 273 AFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAA 332
Query: 230 -----WAVSILNEYQIKLS----ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNT 280
W S+++ KL ++ ++LI MYS+CG ++ A L+F M ++L+ +N
Sbjct: 333 LAVVPWG-SLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNE 391
Query: 281 LISGLASHGHGIECIKLISKMKEDG-IEPDRITYIGILTACSHAGL-LEEGQKVFE---- 334
+ISG A +G IE IKL +++K++ ++PDR T++ +L CSH + +E FE
Sbjct: 392 MISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMIN 451
Query: 335 --SIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELG 392
IK P V+H +I +G+ G++ +A ++I + +LL A K ++
Sbjct: 452 EYRIK-PSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAA 510
Query: 393 ELAAAKLFTVEPHNSSN--YVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVE 448
+ AAK+ + + Y+++SN+YA RW+EVG +R IMR+ GV K SW++
Sbjct: 511 KTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 146/338 (43%), Gaps = 68/338 (20%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P + VT+ ++ + KSG+ A MP + SWN +L+GY S + E F
Sbjct: 250 PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 65 DMLSSGNEPDETT---------------WVTVISSCSSLGDPCLAESIVRKLDKVKFHSN 109
M SSG DE + W ++I +C+ K+ S
Sbjct: 310 KMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAH---------------KLGLDSR 354
Query: 110 YFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP 169
V +AL+DM Y++ G L A +F MP
Sbjct: 355 VVVASALIDM--------------------------------YSKCGMLKHAELMFWTMP 382
Query: 170 ERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLG---SLS 226
++ + WN MI+GYA+NG+S+ AIKLF ++ KPD T +++ + C H +
Sbjct: 383 RKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVM 442
Query: 227 LGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGL 285
LG + + ++NEY+IK S+ SLI + G + +A + QE D V++ L+
Sbjct: 443 LGYFEM-MINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGAC 501
Query: 286 ASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHA 323
++ + +KM E G + D+ Y+ I+ + +A
Sbjct: 502 SARKDLKAAKTVAAKMIELG-DADKDEYLYIVMSNLYA 538
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 112/247 (45%), Gaps = 38/247 (15%)
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
G N+ N+++ Y L A +F++MP+ D +SWNS+++GY Q+G I LF
Sbjct: 85 GFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLF 144
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI-KLSILGYNSLIFMYS 255
E+ +D P+E + + +AC L LG S L + + K +++ N LI MY
Sbjct: 145 LEL-HRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYG 203
Query: 256 RCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+CG M++A L+FQ M +D VS+N
Sbjct: 204 KCGFMDDAVLVFQHMEEKDTVSWN-----------------------------------A 228
Query: 316 ILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGI 375
I+ +CS G LE G F + PD Y +ID + G A +++ MP P++
Sbjct: 229 IVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMP-NPNSSS 287
Query: 376 YGSLLNA 382
+ ++L
Sbjct: 288 WNTILTG 294
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 108/223 (48%), Gaps = 8/223 (3%)
Query: 175 SWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI 234
SW++++ A+ G S+ ++ E+I+ + KPD +V + G+ G +SL
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGE-KPDASPLVHLLRVSGNYGYVSLCRQLHGY 80
Query: 235 LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIEC 294
+ ++ + NSL+ Y S+E+A +F EM D++S+N+L+SG G E
Sbjct: 81 VTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEG 140
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFES-----IKVPDVDHYACMID 349
I L ++ + P+ ++ L AC+ L G + ++ +V C+ID
Sbjct: 141 ICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLID 200
Query: 350 MLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELG 392
M G+ G +++A+ + M E + +++ + + ++ELG
Sbjct: 201 MYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELG 242
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 138/456 (30%), Positives = 217/456 (47%), Gaps = 76/456 (16%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ N+ + ++ YAK +++AR + M VVSWN+M+ G + G E + +F
Sbjct: 259 KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGR 318
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M + D+ T ++++ C A S ++K S+ A C
Sbjct: 319 MHERDMKIDDFTIPSILN--------CFALSRT----EMKIASS-----------AHCLI 355
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+K + + NA++ YA+ G + A +F M E+D +SW +++ G
Sbjct: 356 VKTGYATYKLVN--------NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTH 407
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLS 243
NG A+KLF M PD++ SV SA L L G + I + + LS
Sbjct: 408 NGSYDEALKLFCNM-RVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLS 466
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
+ NSL+ MY++CGS+E+A +IF M RDL+++ LI G A +G
Sbjct: 467 V--NNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG-------------- 510
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLE 358
LLE+ Q+ F+S++ P +HYACMID+ GR G
Sbjct: 511 ---------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFV 549
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYA 418
+ +L+H M +EP A ++ ++L A+R H +E GE AA L +EP+N+ YV LSN+Y+
Sbjct: 550 KVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYS 609
Query: 419 LAGRWKEVGNVRNIMRKQGVKKITAWSWVEHPSHVH 454
AGR E NVR +M+ + + K SWVE VH
Sbjct: 610 AAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVH 645
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/428 (25%), Positives = 192/428 (44%), Gaps = 71/428 (16%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+R+ TW TM+ Y+ S L A F P ++ +SWNA++SGY +SG+ +E LF
Sbjct: 55 PERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFW 114
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+M S G +P+E T +V+ C+SL E I K F + V LL M+A+C
Sbjct: 115 EMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCK 174
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ A+ +F+ + +N+V +W SM+ GY+
Sbjct: 175 RISEAEYLFETMEGEKNNV-------------------------------TWTSMLTGYS 203
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
QNG + AI+ F+++ ++ ++ T SV +AC + + +G+ + + K +I
Sbjct: 204 QNGFAFKAIECFRDL-RREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNI 262
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
++LI MY++C ME A + + M D+VS+N++I G G E + + +M E
Sbjct: 263 YVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHER 322
Query: 305 GIEPDRITYIGILT------------ACSHA------------------------GLLEE 328
++ D T IL + +H G+++
Sbjct: 323 DMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDS 382
Query: 329 GQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNATRI 385
KVFE + DV + ++ G +EA+KL +M + P + S+L+A+
Sbjct: 383 ALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAE 442
Query: 386 HKQVELGE 393
+E G+
Sbjct: 443 LTLLEFGQ 450
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 125/282 (44%), Gaps = 50/282 (17%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G +++V++WT +VTG +G+ +D E ++L
Sbjct: 389 GMIEKDVISWTALVTGNTHNGS-------YD------------------------EALKL 417
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
F +M G PD+ +V+S+ + L + + K F S+ V +L+ M+ K
Sbjct: 418 FCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTK 477
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM---------PERDT 173
CG+L+ A IF+ + + R+ ++ +I YA+ G L A+ F+ M PE
Sbjct: 478 CGSLEDANVIFNSMEI-RDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEH-- 534
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVS 233
+ MI + ++G+ + +L +M + +PD ++ +A G++ G A
Sbjct: 535 --YACMIDLFGRSGDFVKVEQLLHQM----EVEPDATVWKAILAASRKHGNIENGERAAK 588
Query: 234 ILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL 275
L E + ++ Y L MYS G +EA + + M +R++
Sbjct: 589 TLMELEPNNAV-PYVQLSNMYSAAGRQDEAANVRRLMKSRNI 629
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 222/432 (51%), Gaps = 41/432 (9%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T++V Y++ G L +A + + S+V +++S YA+ G V F+ +
Sbjct: 285 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 344
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
D V ++ C + S+ Y +K+
Sbjct: 345 IDAVALVGILHGCKKSSHIDIGMSL----------HGYAIKS------------------ 376
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
G+ ++ N +I+ Y++ D+ LF ++ E +SWNS+I+G Q+G + A
Sbjct: 377 ----GLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTA 432
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSL 250
++F +M+ T PD +T+ S+ + C L L+LG + ++ N ++ + + +L
Sbjct: 433 FEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVC--TAL 490
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
I MY++CG+ +A +F+ + ++N++ISG + G + +M+E G++PD
Sbjct: 491 IDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDE 550
Query: 311 ITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIH 365
IT++G+L+AC+H G ++EG+ F ++ P + HYA M+ +LGR EA+ LI
Sbjct: 551 ITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIW 610
Query: 366 SMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
M ++P + ++G+LL+A IH+++E+GE A K+F ++ N YVL+SN+YA W +
Sbjct: 611 KMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDD 670
Query: 426 VGNVRNIMRKQG 437
V VRN+M+ G
Sbjct: 671 VVRVRNMMKDNG 682
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 195/452 (43%), Gaps = 86/452 (19%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R V T+++ Y K G + +A++ FD+MPER V WNA++ GY+++G + +LF M
Sbjct: 83 RFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVM 142
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
L G P TT V ++ C G S+ K + VK AL+ ++KC L
Sbjct: 143 LQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAEL 202
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER--------------- 171
+A+ +F ++ +++VS N MI AY++ G A +F M E+
Sbjct: 203 GSAEVLFREMK-DKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Query: 172 ------------------DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMV 213
D S++ Y++ G + A +L+ + DS ++V
Sbjct: 262 HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYAS--AKQDSIVGLTSIV 319
Query: 214 SVFSACGHLG----------SLSLGIWAVSIL---------NEYQIKLSILGY------- 247
S ++ G + L + I AV+++ + I +S+ GY
Sbjct: 320 SCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLC 379
Query: 248 ------NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
N LI MYS+ +E +F+++ L+S+N++ISG G ++ +M
Sbjct: 380 TKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQM 439
Query: 302 K-EDGIEPDRITYIGILTACSHAGLLEEGQKV--------FESIKVPDVDHYAC--MIDM 350
G+ PD IT +L CS L G+++ FE+ +++ C +IDM
Sbjct: 440 MLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN------ENFVCTALIDM 493
Query: 351 LGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNA 382
+ G +A + S+ P + S+++
Sbjct: 494 YAKCGNEVQAESVFKSIK-APCTATWNSMISG 524
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 148/341 (43%), Gaps = 39/341 (11%)
Query: 38 RSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW-VTVISSCSSLGDPCL-AE 95
R + ++++L + + +F D+L S P+ T + + ++ +S L E
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVE 70
Query: 96 SIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARL 155
+ L K +VKT+LL+++ K G + +AQ +FD++ R++V NA+
Sbjct: 71 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMP-ERDTVVWNAL------- 122
Query: 156 GDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSV 215
I GY++NG A KLF M+ S P T+V++
Sbjct: 123 ------------------------ICGYSRNGYECDAWKLFIVMLQQGFS-PSATTLVNL 157
Query: 216 FSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL 275
CG G +S G + + ++L N+LI YS+C + A ++F+EM +
Sbjct: 158 LPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKST 217
Query: 276 VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTA-CSHAGLLEEGQKVFE 334
VS+NT+I + G E I + M E +E +T I +L+A SH L V +
Sbjct: 218 VSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL---HCLVVK 274
Query: 335 SIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGI 375
V D+ ++ R G L A +L S + G+
Sbjct: 275 CGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGL 315
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 202 bits (513), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 133/446 (29%), Positives = 221/446 (49%), Gaps = 45/446 (10%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
+ + +V Y+K+G + A F +P+ + WN M+ GY G + + LFN M
Sbjct: 142 ICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHR 201
Query: 70 GNEPDETTWVTVISSCSSLGDPCL---AESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
G++P+ T V + S L DP L A S+ K+ S+ +V AL++M+++C +
Sbjct: 202 GHQPNCYTMVALTSG---LIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
+A + FN + E D V+ +S+I GY++
Sbjct: 259 ASACSV--------------------------------FNSISEPDLVACSSLITGYSRC 286
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G A+ LF E+ + KPD + + V +C L G S + ++L I
Sbjct: 287 GNHKEALHLFAEL-RMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKV 345
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
++LI MYS+CG ++ A +F + +++VS+N+LI GL HG + +++ E G+
Sbjct: 346 CSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGL 405
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAM 361
PD IT+ +L C H+GLL +GQ++FE +K P +HY M+ ++G GKLEEA
Sbjct: 406 IPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAF 465
Query: 362 KLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNY-VLLSNIYALA 420
+ + S+ +GI G+LL+ +H+ L E+ A + S Y V+LSN+YA
Sbjct: 466 EFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARY 525
Query: 421 GRWKEVGNVRNIMRKQGVKKITAWSW 446
GRW EV +R+ + + K+ SW
Sbjct: 526 GRWDEVERLRDGISESYGGKLPGISW 551
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 176/388 (45%), Gaps = 46/388 (11%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
R+ T + YA + +L +AR FD PERSV WN+++ YA++ + LF+ +
Sbjct: 38 RDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI 97
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
L S PD T+ CLA D L
Sbjct: 98 LRSDTRPDNFTYA------------CLARGFSESFDT--------------------KGL 125
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
+ I G+ + + +A++ AY++ G + A LF +P+ D WN MI GY
Sbjct: 126 RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC 185
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G I LF ++ +P+ TMV++ S SL L W+V + + +K+++
Sbjct: 186 GFWDKGINLFN-LMQHRGHQPNCYTMVALTSGLID-PSLLLVAWSV---HAFCLKINLDS 240
Query: 247 YN----SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
++ +L+ MYSRC + A +F ++ DLV+ ++LI+G + G+ E + L ++++
Sbjct: 241 HSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELR 300
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLE 358
G +PD + +L +C+ G++V + D+ + +IDM + G L+
Sbjct: 301 MSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLK 360
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIH 386
AM L +P E + + SL+ +H
Sbjct: 361 CAMSLFAGIP-EKNIVSFNSLILGLGLH 387
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 206/401 (51%), Gaps = 44/401 (10%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+++ +WT+ ++GYA SG + AR FD MPER++VSWNAML GY + E + M
Sbjct: 327 KDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLM 386
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
D T V +++ CS + D + + + + + +N V ALLDM
Sbjct: 387 RQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDM------- 439
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE-RDTVSWNSMIAGYAQ 185
Y + G L A F +M E RD VSWN+++ G A+
Sbjct: 440 -------------------------YGKCGTLQSANIWFRQMSELRDEVSWNALLTGVAR 474
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLS 243
G S A+ F+ M ++KP + T+ ++ + C ++ +L+LG I I + Y+I +
Sbjct: 475 VGRSEQALSFFEGM--QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVV 532
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
I G +++ MYS+C + A +F+E ATRDL+ +N++I G +G E +L ++
Sbjct: 533 IRG--AMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLEN 590
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLE 358
+G++PD +T++GIL AC G +E G + F S+ P V+HY CMI++ + G L
Sbjct: 591 EGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLH 650
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKL 399
+ + + MP +P + + +A + ++ +LG AA +L
Sbjct: 651 QLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRL 691
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 178/353 (50%), Gaps = 21/353 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
NV T++V Y K + AR FD++ S VSWN ++ Y + G E V +F ML
Sbjct: 196 NVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML 255
Query: 68 SSGNEPDETTWVTVISSCS---SLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
P T +V+ +CS +L + +I KL V ++ V T++ DM+ KC
Sbjct: 256 ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVV---ADTVVSTSVFDMYVKCD 312
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
L++A+ +FDQ ++ S + +S YA G AR+LF+ MPER+ VSWN+M+ GY
Sbjct: 313 RLESARRVFDQTRS-KDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYV 371
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSI 244
E A+ F ++ D +T+V + + C + + +G A + + ++
Sbjct: 372 HAHEWDEALD-FLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNV 430
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMAT-RDLVSYNTLISGLASHGHGIECIKLISKMKE 303
+ N+L+ MY +CG+++ A + F++M+ RD VS+N L++G+A G + + M+
Sbjct: 431 IVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQV 490
Query: 304 DGIEPDRITYIGILTACS-----------HAGLLEEGQKVFESIKVPDVDHYA 345
+ +P + T +L C+ H L+ +G K+ I+ VD Y+
Sbjct: 491 EA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYS 542
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 166/355 (46%), Gaps = 18/355 (5%)
Query: 16 VTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDE 75
+ Y K G + AR F++MPER SWNA+++ AQ+G + E R+F M G E
Sbjct: 103 IEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATE 162
Query: 76 TTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQ 135
T++ V+ SC + D L + + K + N ++T+++D++ KC + A+ +FD+
Sbjct: 163 TSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDE 222
Query: 136 LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKL 195
+ V + VS N ++ Y +G A +F KM E + N ++ +A+++
Sbjct: 223 I-VNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEV 281
Query: 196 FKEM--ISTNDS-KPDELTMVSVFS---ACGHLGSLSLGIWAVSILNEYQIKLSILGYNS 249
K + I+ S D + SVF C L S A + ++ + K + + S
Sbjct: 282 GKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLES------ARRVFDQTRSK-DLKSWTS 334
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
+ Y+ G EA +F M R++VS+N ++ G E + ++ M+++ D
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 310 RITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYA----CMIDMLGRVGKLEEA 360
+T + IL CS ++ G++ I D ++DM G+ G L+ A
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSA 449
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N I AY + G + AR+LF +MPERD SWN++I AQNG S ++F+ M + +
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM-NRDGV 158
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN-------SLIFMYSRCG 258
+ E + V +CG + L L L + + GY+ S++ +Y +C
Sbjct: 159 RATETSFAGVLKSCGLILDLRL-------LRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 259 SMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILT 318
M +A +F E+ VS+N ++ G E + + KM E + P T ++
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVML 271
Query: 319 ACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLI 364
ACS + LE G KV +I V D + DM + +LE A ++
Sbjct: 272 ACSRSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF 321
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 189/330 (57%), Gaps = 20/330 (6%)
Query: 138 VYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ-----NGESLMA 192
+Y + + ++ YA+ GDL +AR +F++MPER +V+WN+MI GY N + A
Sbjct: 143 LYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKA 202
Query: 193 IKLFKEMISTNDS-KPDELTMVSVFSACGHLGSLSLGIWAVSILNE--YQIKLSILGYNS 249
+ LF+ +P + TMV V SA G L +G + + + ++ + +
Sbjct: 203 MVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTA 262
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
L+ MYS+CG + A +F+ M +++ ++ ++ +GLA +G G E L+++M E GI+P+
Sbjct: 263 LVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPN 322
Query: 310 RITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLI 364
IT+ +L+A H GL+EEG ++F+S+K P ++HY C++D+LG+ G+++EA + I
Sbjct: 323 EITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFI 382
Query: 365 HSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSS-------NYVLLSNIY 417
+MP++P A + SL NA I+ + +GE L +E + +YV LSN+
Sbjct: 383 LAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVL 442
Query: 418 ALAGRWKEVGNVRNIMRKQGVKKITAWSWV 447
A G+W EV +R M+++ +K +S+V
Sbjct: 443 AHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 156/343 (45%), Gaps = 52/343 (15%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYA--------QSGAALETVRLFN 64
TT++ YAK+G+L+ AR FD+MPER+ V+WNAM+ GY + A+ R F+
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKF--HSNYFVKTALLDMHAK 122
SG P +TT V V+S+ S G + + ++K+ F + F+ TAL+DM++K
Sbjct: 211 -CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSK 269
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAG 182
CG L A +F+ + V ++ +W SM G
Sbjct: 270 CGCLNNAFSVFELMKV--------------------------------KNVFTWTSMATG 297
Query: 183 YAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SILNEYQIK 241
A NG L M + + KP+E+T S+ SA H+G + GI S+ + +
Sbjct: 298 LALNGRGNETPNLLNRM-AESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVT 356
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISK 300
I Y ++ + + G ++EA M + D + +L + + +G + ++
Sbjct: 357 PVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKA 416
Query: 301 MKEDGIEPDRIT------YIGILTACSHAGLLEEGQKVFESIK 337
+ E E ++++ Y+ + +H G E +K+ + +K
Sbjct: 417 LLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMK 459
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 80/156 (51%), Gaps = 5/156 (3%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+ +V T +V Y+K G L A F+ M ++V +W +M +G A +G ET L N
Sbjct: 253 PEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLN 312
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESI-VRKLDKVKFHSNYFVK--TALLDMHA 121
M SG +P+E T+ +++S+ +G + E I + K K +F ++ ++D+
Sbjct: 313 RMAESGIKPNEITFTSLLSAYRHIG--LVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLG 370
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGD 157
K G ++ A + + + +++ ++ +A + G+
Sbjct: 371 KAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGE 406
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 218/425 (51%), Gaps = 22/425 (5%)
Query: 44 NAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISS-----CSSLGDPCLAESIV 98
N + Y S + + + + D+L G PD T+V++IS C G C ++I
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 99 RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDL 158
D+V V+ +L+ M+ CG L A+++F ++ R+ VS N++I+ R GD+
Sbjct: 147 HGCDQV-----LPVQNSLMHMYTCCGALDLAKKLFVEIP-KRDIVSWNSIIAGMVRNGDV 200
Query: 159 SFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA 218
A LF++MP+++ +SWN MI+ Y ++I LF+EM+ + +E T+V + +A
Sbjct: 201 LAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAG-FQGNESTLVLLLNA 259
Query: 219 CGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSY 278
CG L G + L + S++ +LI MY +C + A IF ++ R+ V++
Sbjct: 260 CGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTW 319
Query: 279 NTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFE---- 334
N +I HG ++L M + PD +T++G+L C+ AGL+ +GQ +
Sbjct: 320 NVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVD 379
Query: 335 --SIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNATRIHKQV 389
IK P+ H CM ++ G EEA + + ++P E P + + +LL+++R
Sbjct: 380 EFQIK-PNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNP 438
Query: 390 ELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWVEH 449
LGE A L +P N Y LL NIY++ GRW++V VR +++++ + +I V+
Sbjct: 439 TLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDL 498
Query: 450 PSHVH 454
VH
Sbjct: 499 KEIVH 503
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 148/310 (47%), Gaps = 34/310 (10%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+R++V+W +++ G ++G++ A FD+MP+++++SWN M+S Y + ++ LF
Sbjct: 180 PKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFR 239
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
+M+ +G + +E+T V ++++C S+ L + +S+ + TAL+DM+ KC
Sbjct: 240 EMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCK 299
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ A+ IFD L + RN V+ WN MI +
Sbjct: 300 EVGLARRIFDSLSI-RNKVT-------------------------------WNVMILAHC 327
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQIKLS 243
+G ++LF+ MI+ +PDE+T V V C G +S G S++ +E+QIK +
Sbjct: 328 LHGRPEGGLELFEAMIN-GMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPN 386
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
+ +YS G EEA + + D+ +T + L S L + +
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 304 DGIEPDRITY 313
IE D + Y
Sbjct: 447 SLIETDPLNY 456
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/439 (28%), Positives = 221/439 (50%), Gaps = 50/439 (11%)
Query: 21 KSGNLKTARIYFDKMPE-RSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGN-EPDETTW 78
K G+L +A + + M E R + SWN+++SG A SG LE++R F M G D T
Sbjct: 525 KLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITL 584
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN---LKAAQEIFDQ 135
+ IS+ +LG L + +C + +K+ +E+ Q
Sbjct: 585 LGTISASGNLG---------------------------LVLQGRCFHGLAIKSLRELDTQ 617
Query: 136 LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKL 195
L N +I+ Y R D+ A +F + + + SWN +I+ +QN +L
Sbjct: 618 LQ--------NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQL 669
Query: 196 FKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYS 255
F+ + +P+E+T V + SA LGS S G+ A L + + +L+ MYS
Sbjct: 670 FRNL----KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYS 725
Query: 256 RCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG-IEPDRITYI 314
CG +E +F+ + ++N++IS HG G + ++L ++ + +EP++ ++I
Sbjct: 726 SCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFI 785
Query: 315 GILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
+L+ACSH+G ++EG ++ ++ P +H ++DMLGR GKL EA + I +
Sbjct: 786 SLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGE 845
Query: 370 EPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNV 429
AG++G+LL+A H +LG+ A LF +EP N+S Y+ L+N Y G W+E +
Sbjct: 846 PQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRL 905
Query: 430 RNIMRKQGVKKITAWSWVE 448
R ++ +KK+ +S ++
Sbjct: 906 RKMVEDNALKKLPGYSVID 924
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 142/545 (26%), Positives = 231/545 (42%), Gaps = 142/545 (26%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
YAK NL +A F M R +VSWN +++ +G ++++ F M SG E D T+
Sbjct: 233 YAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTF 292
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKF--HSNYFVKTALLDMHAKCGNLKAAQEIFDQL 136
VIS+CSS+ + L ES+ + K + ++ V +++ M++KCG+ +AA+ +F++L
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
Query: 137 GVYRNSVSCNAMISAYAR---------------------------------LGDLSFARD 163
V R+ +S NA+++ +A GDLSF+R+
Sbjct: 353 -VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSRE 411
Query: 164 ---------------------------------------LFNKMPERDTVSWNSMIAGYA 184
LF RD VSWNSMI+ ++
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 185 QNGESLMAIKLFKEMISTND-SKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
QNG + A LFKE++S SK T++++ ++C SL G
Sbjct: 472 QNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFG--------------- 516
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHGHGIECIKLISKMK 302
S+ + G + A L + M+ TRDL S+N++ISG AS GH +E ++ M
Sbjct: 517 ----KSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMS 572
Query: 303 EDG-IEPDRITYIGILTACSHAGLLEEGQ------------------------------- 330
+G I D IT +G ++A + GL+ +G+
Sbjct: 573 REGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDI 632
Query: 331 ----KVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIH 386
KVF I P++ + C+I L + E +L ++ +EP+ + LL+A+
Sbjct: 633 ESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEITFVGLLSASTQL 692
Query: 387 KQVELGELAAAKL----FTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKIT 442
G A L F P S+ V ++Y+ G E G + R GV I+
Sbjct: 693 GSTSYGMQAHCHLIRRGFQANPFVSAALV---DMYSSCGML-ETG--MKVFRNSGVNSIS 746
Query: 443 AWSWV 447
AW+ V
Sbjct: 747 AWNSV 751
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 209/477 (43%), Gaps = 107/477 (22%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P+ +V ++++ Y+K G+ + A F+++ R V+S NA+L+G+A +G E + N
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 65 DMLSSGN-EPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYF-VKTALLDMHAK 122
M S +PD T V++ S C L ++ +++ S V +++DM+ K
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYA----------------------------- 153
CG L E+ + +R+ VS N+MISA++
Sbjct: 442 CG-LTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTV 500
Query: 154 ------------------------RLGDLSFARDLFNKMPE-RDTVSWNSMIAGYAQNGE 188
+LGDL+ A M E RD SWNS+I+G A +G
Sbjct: 501 LAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI----WAVSILNEYQIKLSI 244
L +++ F+ M + D +T++ SA G+LG + G A+ L E +L
Sbjct: 561 HLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQ- 619
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
N+LI MY RC +E A +F ++ +L S+N +IS L+ + G E +L +K
Sbjct: 620 ---NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK-- 674
Query: 305 GIEPDRITYIGILTAC-----------------------------------SHAGLLEEG 329
+EP+ IT++G+L+A S G+LE G
Sbjct: 675 -LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETG 733
Query: 330 QKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP----MEPHAGIYGSLLNA 382
KVF + V + + +I G G E+AM+L + MEP+ + SLL+A
Sbjct: 734 MKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSA 790
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 178/362 (49%), Gaps = 41/362 (11%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+++ T + ++T Y ++G L ++ FD++ E+ V+ WN+M++ Q+G + V LF +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 67 LSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNL 126
+ GNE D TT + S+ + L + KC L
Sbjct: 180 IHKGNEFDSTTLLLAASA-----------------------------LSSLHLSRKCSML 210
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
+ + G+ +S CNA+++ YA+ +LS A +F M RD VSWN+++ N
Sbjct: 211 HC---LAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLAN 267
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSI 244
G +++ FK M + + D +T V SAC + L+LG + + I + Y + +
Sbjct: 268 GHPRKSLQYFKSMTGSGQ-EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHV 326
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE- 303
NS+I MYS+CG E A +F+E+ RD++S N +++G A++G E ++++M+
Sbjct: 327 SVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSV 386
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYA-----CMIDMLGRVGKLE 358
D I+PD T + I + C EG+ V ++ A +IDM G+ G
Sbjct: 387 DKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTT 446
Query: 359 EA 360
+A
Sbjct: 447 QA 448
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 106/202 (52%), Gaps = 9/202 (4%)
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
+ G+ ++ + + +++ Y R G+L + LF+++ E+D + WNSMI QNG + A+
Sbjct: 115 KCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVG 174
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG----YNSL 250
LF EMI K +E ++ A S S+L+ I+ ++G N+L
Sbjct: 175 LFIEMI----HKGNEFDSTTLLLA-ASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNAL 229
Query: 251 IFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDR 310
+ +Y++ ++ A +F M RD+VS+NT+++ ++GH + ++ M G E D
Sbjct: 230 MNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADT 289
Query: 311 ITYIGILTACSHAGLLEEGQKV 332
+T+ +++ACS L G+ +
Sbjct: 290 VTFSCVISACSSIEELTLGESL 311
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 216/428 (50%), Gaps = 42/428 (9%)
Query: 19 YAKSGNLKTARIYFDKMPER-SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETT 77
Y G + AR FD+MP+ V+++ +++GY Q + LF M S + +T
Sbjct: 170 YCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVST 229
Query: 78 WVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG 137
++ +S+ S LGD AES K+ LD+H
Sbjct: 230 LLSFLSAISDLGDLSGAESAHVLCIKIGLD---------LDLHL---------------- 264
Query: 138 VYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFK 197
A+I Y + G +S AR +F+ +D V+WN MI YA+ G + L +
Sbjct: 265 -------ITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLR 317
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRC 257
+M KP+ T V + S+C + + +G +L E +I L + +L+ MY++
Sbjct: 318 QM-KYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKV 376
Query: 258 GSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG--IEPDRITYIG 315
G +E+A IF M +D+ S+ +ISG +HG E + L +KM+E+ + P+ IT++
Sbjct: 377 GLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLV 436
Query: 316 ILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME 370
+L ACSH GL+ EG + F+ + P V+HY C++D+LGR G+LEEA +LI ++P+
Sbjct: 437 VLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPIT 496
Query: 371 PHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR-WKEVGNV 429
+ + +LL A R++ +LGE +L + + ++ +LL+ +A+AG K + N
Sbjct: 497 SDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKSLDNE 556
Query: 430 RNIMRKQG 437
N RK+
Sbjct: 557 LNKGRKEA 564
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 135/282 (47%), Gaps = 35/282 (12%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T ++ Y K+G + +AR FD + VV+WN M+ YA++G E V L M +
Sbjct: 266 TALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMK 325
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEI 132
P+ +T+V ++SSC+ + ++ L++ + + + TAL+DM+AK G L+ A EI
Sbjct: 326 PNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEI 385
Query: 133 FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMA 192
FN+M ++D SW +MI+GY +G + A
Sbjct: 386 --------------------------------FNRMKDKDVKSWTAMISGYGAHGLAREA 413
Query: 193 IKLFKEMISTN-DSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE-YQIKLSILGYNSL 250
+ LF +M N +P+E+T + V +AC H G + GI + E Y + Y +
Sbjct: 414 VTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCV 473
Query: 251 IFMYSRCGSMEEATLIFQEMA-TRDLVSYNTLISGLASHGHG 291
+ + R G +EEA + + + T D ++ L++ +G+
Sbjct: 474 VDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNA 515
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 166/358 (46%), Gaps = 56/358 (15%)
Query: 24 NLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVIS 83
+++ A F+ + ++ +N M+ GY+ S +FN + + G D +++T +
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLK 133
Query: 84 SCSSLGDPCLAESIVRKLDKVKFHSNYFV----KTALLDMHAKCGNLKAAQEIFDQLGVY 139
SCS + C+ SI L + S + V + AL+ + CG + A+++FD++
Sbjct: 134 SCSR--ELCV--SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQS 189
Query: 140 RNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEM 199
++V+ + +++ Y ++ + A DLF M + + V S
Sbjct: 190 VDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVS--------------------- 228
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
T++S SA LG LS A + + + L + +LI MY + G
Sbjct: 229 -----------TLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGG 277
Query: 260 MEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTA 319
+ A IF +D+V++N +I A G EC+ L+ +MK + ++P+ T++G+L++
Sbjct: 278 ISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSS 337
Query: 320 CSH----------AGLLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
C++ A LLEE + ++I ++DM +VG LE+A+++ + M
Sbjct: 338 CAYSEAAFVGRTVADLLEEERIALDAIL------GTALVDMYAKVGLLEKAVEIFNRM 389
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 145/337 (43%), Gaps = 49/337 (14%)
Query: 151 AYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDEL 210
A++ + D+ +A +F + + +N+MI GY+ + E A +F ++ + + D
Sbjct: 68 AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLT-LDRF 126
Query: 211 TMVSVFSACGHLGSLSL--GIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQ 268
+ ++ +C +S+ G+ +++ + + + + N+LI Y CG + +A +F
Sbjct: 127 SFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDL--RNALIHFYCVCGKISDARKVFD 184
Query: 269 EM-ATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLL- 326
EM + D V+++TL++G + L M++ + + T + L+A S G L
Sbjct: 185 EMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLS 244
Query: 327 ----------------------------------EEGQKVFESIKVPDVDHYACMIDMLG 352
+++F+ DV + CMID
Sbjct: 245 GAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYA 304
Query: 353 RVGKLEEAMKLIHSM---PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSN 409
+ G LEE + L+ M M+P++ + LL++ + +G A L E + +
Sbjct: 305 KTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLL--EEERIALD 362
Query: 410 YVL---LSNIYALAGRWKEVGNVRNIMRKQGVKKITA 443
+L L ++YA G ++ + N M+ + VK TA
Sbjct: 363 AILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTA 399
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 7/168 (4%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+ + T +V YAK G L+ A F++M ++ V SW AM+SGY G A E V LFN M
Sbjct: 362 DAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKME 421
Query: 68 SSGNE--PDETTWVTVISSCSSLGDPCLAESI---VRKLDKVKFHSNYFVKTALLDMHAK 122
+ P+E T++ V+++CS G + E I R ++ F ++D+ +
Sbjct: 422 EENCKVRPNEITFLVVLNACSHGG--LVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGR 479
Query: 123 CGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE 170
G L+ A E+ L + +S + A+++A G+ + ++ E
Sbjct: 480 AGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAE 527
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/450 (26%), Positives = 233/450 (51%), Gaps = 44/450 (9%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+V +++ Y+K ++ +A FD+ R++VSWN++L+G+ + E + +F+ M+
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
E DE T V+++ C P +SI + + + SN ++L+D + C
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCS--- 377
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+ D G + + M +D VS ++MI+G A G
Sbjct: 378 ----LVDDAGT-------------------------VLDSMTYKDVVSCSTMISGLAHAG 408
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
S AI +F M T P+ +T++S+ +AC L WA I + ++ +
Sbjct: 409 RSDEAISIFCHMRDT----PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISV 464
Query: 248 -NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
S++ Y++CG++E A F ++ ++++S+ +IS A +G + + L +MK+ G
Sbjct: 465 GTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGY 524
Query: 307 EPDRITYIGILTACSHAGLLEEGQKVFESI----KVPDVDHYACMIDMLGRVGKLEEAMK 362
P+ +TY+ L+AC+H GL+++G +F+S+ P + HY+C++DML R G+++ A++
Sbjct: 525 TPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVE 584
Query: 363 LIHSMPMEPHAG--IYGSLLNATRIH-KQVELGELAAAKLFTVEPHNSSNYVLLSNIYAL 419
LI ++P + AG +G++L+ R K++ + A++ +EP SS Y+L S+ +A
Sbjct: 585 LIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAA 644
Query: 420 AGRWKEVGNVRNIMRKQGVKKITAWSWVEH 449
W++V +R +++++ V+ + +S V
Sbjct: 645 EKSWEDVAMMRRLVKERKVRVVAGYSMVRE 674
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 111/414 (26%), Positives = 184/414 (44%), Gaps = 73/414 (17%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTW 78
Y K G+L + FD M R VSWN ++ G G E + F+ + G EP+ +T
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 79 VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGV 138
V VI +C SL D K H Y +++ CG +
Sbjct: 131 VLVIHACRSLW-----------FDGEKIH-GYVIRSGF------CG-----------ISS 161
Query: 139 YRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
+NS+ C YA LS AR LF++M ERD +SW+ +I Y Q+ E ++ +KLFKE
Sbjct: 162 VQNSILC-----MYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKE 215
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYSR 256
M+ ++PD +T+ SV AC + + +G + SI + + + NSLI MYS+
Sbjct: 216 MVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA-DVFVCNSLIDMYSK 274
Query: 257 CGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGI 316
++ A +F E R++VS+N++++G + E +++ M ++ +E D +T + +
Sbjct: 275 GFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSL 334
Query: 317 LTAC-----------------------------------SHAGLLEEGQKVFESIKVPDV 341
L C + L+++ V +S+ DV
Sbjct: 335 LRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDV 394
Query: 342 DHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELA 395
+ MI L G+ +EA+ + M P+A SLLNA + + + A
Sbjct: 395 VSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 448
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 45/270 (16%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ N V ++++ Y + A D M + VVS + M+SG A +G + E + +F
Sbjct: 360 ESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCH 419
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAE-----SIVRKLDKVKFHSNYFVKTALLDMH 120
M + P+ T ++++++CS D ++ +I R L ++ V T+++D +
Sbjct: 420 M---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI----NDISVGTSIVDAY 472
Query: 121 AKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
AKCG ++ A+ FDQ+ +N +S +ISAYA N +P++
Sbjct: 473 AKCGAIEMARRTFDQI-TEKNIISWTVIISAYA-----------INGLPDK--------- 511
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
A+ LF EM P+ +T ++ SAC H G + G+ + E
Sbjct: 512 -----------ALALFDEM-KQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH 559
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEM 270
K S+ Y+ ++ M SR G ++ A + + +
Sbjct: 560 KPSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 18/229 (7%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
N++ Y + GDL F+ M RD+VSWN ++ G G + F ++
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKL-RVWGF 123
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY----NSLIFMYSRCGSME 261
+P+ T+V V AC L + ++ Y I+ G NS++ MY+ S+
Sbjct: 124 EPNTSTLVLVIHACRSLW------FDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL- 176
Query: 262 EATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTAC 320
A +F EM+ RD++S++ +I + +KL +M E EPD +T +L AC
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 321 SHAGLLEEGQKV--FESIKVPDV-DHYAC--MIDMLGRVGKLEEAMKLI 364
+ ++ G+ V F + D+ D + C +IDM + ++ A ++
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVF 285
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 216/445 (48%), Gaps = 46/445 (10%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMP---ERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
+ ++ Y+ G+L A F + SV WN+MLSG+ + + L + S
Sbjct: 277 SALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQS 336
Query: 70 GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAA 129
D T + C + + L + + + +Y V + L+D+HA GN++ A
Sbjct: 337 DLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDA 396
Query: 130 QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGES 189
+ LF+++P +D ++++ +I G ++G +
Sbjct: 397 HK--------------------------------LFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 190 LMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGY 247
+A LF+E+I D+ + ++ C L SL G I + I Y+ + +
Sbjct: 425 SLAFYLFRELIKLG-LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESE--PVTA 481
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
+L+ MY +CG ++ ++F M RD+VS+ +I G +G E + KM GIE
Sbjct: 482 TALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIE 541
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMK 362
P+++T++G+L+AC H+GLLEE + E++K P ++HY C++D+LG+ G +EA +
Sbjct: 542 PNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANE 601
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGR 422
LI+ MP+EP I+ SLL A HK L + A KL P + S Y LSN YA G
Sbjct: 602 LINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGM 661
Query: 423 WKEVGNVRNIMRKQGVKKITAWSWV 447
W ++ VR +K G K+ + SW+
Sbjct: 662 WDQLSKVREAAKKLGAKE-SGMSWI 685
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 181/370 (48%), Gaps = 11/370 (2%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
+NV +++ Y L A FD+M ER++V+W M+SGY G + + L+ M
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
Query: 67 LSSGNE-PDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
L S E +E + V+ +C +GD L + ++ K + + +++DM+ K G
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
L A F ++ + +S S N +IS Y + G + A LF++MP+ + VSWN +I+G+
Sbjct: 158 LIEANSSFKEI-LRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVD 216
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
G S A++ M D + AC G L++G + + ++ S
Sbjct: 217 KG-SPRALEFLVRM-QREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPF 274
Query: 246 GYNSLIFMYSRCGSMEEATLIF--QEMATRDLVS-YNTLISGLASHGHGIECIKLISKMK 302
++LI MYS CGS+ A +F +++A V+ +N+++SG + + L+ ++
Sbjct: 275 AISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIY 334
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP--DVDHY--ACMIDMLGRVGKLE 358
+ + D T G L C + L G +V + V ++D+ + ++D+ VG ++
Sbjct: 335 QSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQ 394
Query: 359 EAMKLIHSMP 368
+A KL H +P
Sbjct: 395 DAHKLFHRLP 404
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 152/333 (45%), Gaps = 46/333 (13%)
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLF 196
G+ +N N +IS Y LS A +F++M ER+ V+W +M++GY +G+ AI+L+
Sbjct: 35 GISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELY 94
Query: 197 KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV----------------SILNEYQ- 239
+ M+ + + +E +V ACG +G + LGI S+++ Y
Sbjct: 95 RRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVK 154
Query: 240 --------------IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGL 285
++ S +N+LI Y + G M+EA +F M ++VS+N LISG
Sbjct: 155 NGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGF 214
Query: 286 ASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH-- 343
G ++ + +M+ +G+ D L ACS GLL G+++ + ++
Sbjct: 215 VDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSP 273
Query: 344 --YACMIDMLGRVGKLEEAMKLIHS--MPMEPHAGIYGSLLNATRIHKQVELGELAAAKL 399
+ +IDM G L A + H + + ++ S+L+ I+++ E AA
Sbjct: 274 FAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENE-----AALW 328
Query: 400 FTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNI 432
++ + S L + Y L+G K N N+
Sbjct: 329 LLLQIYQSD---LCFDSYTLSGALKICINYVNL 358
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 150/334 (44%), Gaps = 36/334 (10%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ + + + +V +A GN++ A F ++P + +++++ ++ G +SG LF +
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
++ G + D+ ++ CSSL + I K + S TAL+DM+ KCG
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+ N ++ LF+ M ERD VSW +I G+ Q
Sbjct: 494 ID------------------NGVV--------------LFDGMLERDVVSWTGIIVGFGQ 521
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL-NEYQIKLSI 244
NG A + F +MI+ +P+++T + + SAC H G L + + +EY ++ +
Sbjct: 522 NGRVEEAFRYFHKMINIG-IEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYL 580
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKE 303
Y ++ + + G +EA + +M D + +L++ +H + + +I++
Sbjct: 581 EHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNA-GLVTVIAEKLL 639
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
G D Y + A + G+ ++ KV E+ K
Sbjct: 640 KGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAK 673
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 222/430 (51%), Gaps = 42/430 (9%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F M +VVSW ++ G G + L +M+ EP+ T V+ +CS L
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKL--- 440
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
R + +V L++HA E+ V N+++ A
Sbjct: 441 -------RHVRRV------------LEIHAYLLRRHVDGEM----------VVGNSLVDA 471
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
YA + +A ++ M RD +++ S++ + + G+ MA+ + M + + D+L+
Sbjct: 472 YASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG-DGIRMDQLS 530
Query: 212 MVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQE 269
+ SA +LG+L G + S+ + + S+L NSL+ MYS+CGS+E+A +F+E
Sbjct: 531 LPGFISASANLGALETGKHLHCYSVKSGFSGAASVL--NSLVDMYSKCGSLEDAKKVFEE 588
Query: 270 MATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEG 329
+AT D+VS+N L+SGLAS+G + +M+ EPD +T++ +L+ACS+ L + G
Sbjct: 589 IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG 648
Query: 330 QKVFESIKV-----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATR 384
+ F+ +K P V+HY ++ +LGR G+LEEA ++ +M ++P+A I+ +LL A R
Sbjct: 649 LEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACR 708
Query: 385 IHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAW 444
+ LGE A K + P + + Y+LL+++Y +G+ + RN+M ++ + K
Sbjct: 709 YRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGK 768
Query: 445 SWVEHPSHVH 454
S VE VH
Sbjct: 769 STVEVQGKVH 778
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 196/465 (42%), Gaps = 107/465 (23%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N+ +++ Y K+ + AR FD+M R+V +W M+S + +S + LF +M+
Sbjct: 57 NLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMM 116
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+SG P+E T+ +V+ SC+ L D + + K F N V ++L D+++KCG K
Sbjct: 117 ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFK 176
Query: 128 AAQEIFDQL----------------------------------GVYRNSVSCNAMISAYA 153
A E+F L GV N + ++ A +
Sbjct: 177 EACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASS 236
Query: 154 RLGDLSFARDL-------------------------FNKMPE----------RDTVSWNS 178
LG L F + + F+KM + +D W S
Sbjct: 237 FLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTS 295
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+++G+ +N + A+ F EM S +P+ T ++ S C + SL G S +
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLG-LQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Query: 239 QIKLSILGYNSLIFMYSRCGSME-EATLIFQEMATRDLVSYNTLISGLASHGHGIECIKL 297
+ S N+L+ MY +C + E EA+ +F M + ++VS+ TLI GL HG +C L
Sbjct: 355 GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGL 414
Query: 298 ISKMKEDGIEPDRITYIGILTACS-----------HAGLLE---EGQ------------- 330
+ +M + +EP+ +T G+L ACS HA LL +G+
Sbjct: 415 LMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYAS 474
Query: 331 --------KVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
V S+K D Y ++ +GK E A+ +I+ M
Sbjct: 475 SRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYM 519
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 127/238 (53%), Gaps = 10/238 (4%)
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
+ G+ N CN ++S Y + + AR LF++M R +W MI+ + ++ E A+
Sbjct: 51 KFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALS 110
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIF 252
LF+EM+++ + P+E T SV +C L +S G + I ++ S++G +SL
Sbjct: 111 LFEEMMASG-THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGN-SVVG-SSLSD 167
Query: 253 MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
+YS+CG +EA +F + D +S+ +IS L E ++ S+M + G+ P+ T
Sbjct: 168 LYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFT 227
Query: 313 YIGILTACSHAGLLEEGQKVFESIKVP----DVDHYACMIDMLGRVGKLEEAMKLIHS 366
++ +L A S G LE G+ + +I V +V ++D + K+E+A+++++S
Sbjct: 228 FVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 84/157 (53%), Gaps = 5/157 (3%)
Query: 14 TMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEP 73
++V Y+K G+L+ A+ F+++ VVSWN ++SG A +G + F +M EP
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEP 627
Query: 74 DETTWVTVISSCSS--LGDPCLAE-SIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
D T++ ++S+CS+ L D L +++K+ ++ ++V L+ + + G L+ A
Sbjct: 628 DSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVH--LVGILGRAGRLEEAT 685
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNK 167
+ + + + N++ ++ A G+LS D+ NK
Sbjct: 686 GVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANK 722
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/438 (26%), Positives = 224/438 (51%), Gaps = 43/438 (9%)
Query: 19 YAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLS-SGNEPDETT 77
Y G+++ A F ++ ++VSWN+++SG +++G + + ++ +L S PDE T
Sbjct: 345 YCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYT 404
Query: 78 WVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLG 137
+ IS+ + + + ++ K+ + + FV T LL M+ K ++AQ++
Sbjct: 405 FSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKV----- 459
Query: 138 VYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFK 197
F+ M ERD V W MI G+++ G S +A++ F
Sbjct: 460 ---------------------------FDVMKERDVVLWTEMIVGHSRLGNSELAVQFFI 492
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLIFMYS 255
EM + + D ++ SV AC + L G ++I + +S+ G +L+ MY
Sbjct: 493 EMYREKN-RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCG--ALVDMYG 549
Query: 256 RCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+ G E A IF + DL +N+++ + HG + + ++ E+G PD +TY+
Sbjct: 550 KNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLS 609
Query: 316 ILTACSHAGLLEEGQKVFESIKVPDV----DHYACMIDMLGRVGKLEEAMKLI-HSMPME 370
+L ACSH G +G+ ++ +K + HY+CM++++ + G ++EA++LI S P
Sbjct: 610 LLAACSHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGN 669
Query: 371 PHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVR 430
A ++ +LL+A + +++G AA ++ ++P +++ ++LLSN+YA+ GRW++V +R
Sbjct: 670 NQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMR 729
Query: 431 NIMRKQGVKKITAWSWVE 448
+R K SW+E
Sbjct: 730 RKIRGLASSKDPGLSWIE 747
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 184/397 (46%), Gaps = 74/397 (18%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQS-GAALETVRLFNDMLSSGNEP 73
+++ Y + G+L+ AR FDKMP R+VVS+NA+ S Y+++ A L M +P
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKP 197
Query: 74 DETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF 133
+ +T+ +++ C+ L D + S+ ++ K+ + N V+T++L M++ CG+L++A+ IF
Sbjct: 198 NSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIF 257
Query: 134 DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAI 193
D + RD V+WN+MI G +N + +
Sbjct: 258 DCVN--------------------------------NRDAVAWNTMIVGSLKNDKIEDGL 285
Query: 194 KLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIKLSILGYNSLI 251
F+ M+ + P + T V + C LGS SLG I A I+++ L + N+L+
Sbjct: 286 MFFRNMLMSG-VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPL--DNALL 342
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK-MKEDGIEPDR 310
MY CG M EA +F + +LVS+N++ISG + +G G + + + + ++ PD
Sbjct: 343 DMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDE 402
Query: 311 ITYIGILTACS------HAGLL-----------------------------EEGQKVFES 335
T+ ++A + H LL E QKVF+
Sbjct: 403 YTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDV 462
Query: 336 IKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPH 372
+K DV + MI R+G E A++ M E +
Sbjct: 463 MKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN 499
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 177/388 (45%), Gaps = 39/388 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
NVV T+++ Y+ G+L++AR FD + R V+WN M+ G ++ + + F +ML
Sbjct: 233 NVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNML 292
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
SG +P + T+ V++ CS LG L + I ++ ++ + ALLDM+ CG+++
Sbjct: 293 MSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMR 352
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
A + F ++ + VSWNS+I+G ++NG
Sbjct: 353 EAFYV--------------------------------FGRIHNPNLVSWNSIISGCSENG 380
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
A+ +++ ++ + +PDE T + SA G + + + S+
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
+L+ MY + E A +F M RD+V + +I G + G+ ++ +M +
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIKVP---DVDHYAC--MIDMLGRVGKLEEAMK 362
D + ++ ACS +L +G+ VF + + D C ++DM G+ GK E A +
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQGE-VFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-E 558
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVE 390
I S+ P + S+L A H VE
Sbjct: 559 TIFSLASNPDLKCWNSMLGAYSQHGMVE 586
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 169/359 (47%), Gaps = 43/359 (11%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAM--LSGYAQSGAAL--ETVRLFNDMLSSG 70
+++ Y + +L+ AR FDKMP+R++V+ + + Y G++L + ++L + +
Sbjct: 28 LISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMIFF 87
Query: 71 NEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQ 130
+E + SS L C++ +++++ ++ H+ L + A G AA
Sbjct: 88 MPLNE-----IASSVVELTRKCVSITVLKRARQI--HA--------LVLTAGAG---AAT 129
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESL 190
E Y N N +IS Y R G L AR +F+KMP R+ VS+N++ + Y++N +
Sbjct: 130 E-----SPYAN----NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFA 180
Query: 191 MAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL----SILG 246
++ KP+ T S+ C L + +G S LN IKL +++
Sbjct: 181 SYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMG----SSLNSQIIKLGYSDNVVV 236
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGI 306
S++ MYS CG +E A IF + RD V++NT+I G + + + M G+
Sbjct: 237 QTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGV 296
Query: 307 EPDRITYIGILTACSHAGLLEEGQ----KVFESIKVPDVDHYACMIDMLGRVGKLEEAM 361
+P + TY +L CS G G+ ++ S + D+ ++DM G + EA
Sbjct: 297 DPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAF 355
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 33/264 (12%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+R+V TT+++ Y K+ ++A+ FD M ER VV W M+ G+++ G + V+ F +
Sbjct: 434 ERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIE 493
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M N D + +VI +CS + E + F V AL+DM+ K G
Sbjct: 494 MYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGK 553
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+ A+ IF S++ N D WNSM+ Y+Q
Sbjct: 554 YETAETIF--------SLASNP------------------------DLKCWNSMLGAYSQ 581
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
+G A+ F++++ N PD +T +S+ +AC H GS G + + + E IK
Sbjct: 582 HGMVEKALSFFEQILE-NGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQGIKAGFK 640
Query: 246 GYNSLIFMYSRCGSMEEATLIFQE 269
Y+ ++ + S+ G ++EA + ++
Sbjct: 641 HYSCMVNLVSKAGLVDEALELIEQ 664
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 123/307 (40%), Gaps = 59/307 (19%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWN--SMIAGYAQNGESLMA--IKL------ 195
N +IS Y R L AR +F+KMP+R+ V+ S + Y G SL + IKL
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 196 ----FKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLI 251
E+ S+ + ++V + +L L A + S N+LI
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATE------SPYANNNLI 139
Query: 252 FMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASH-GHGIECIKLISKMKEDGIEPDR 310
MY RCGS+E+A +F +M R++VSYN L S + + L + M + ++P+
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 311 ITYIGILTAC-----------------------------------SHAGLLEEGQKVFES 335
T+ ++ C S G LE +++F+
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 336 IKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNATRIHKQVELG 392
+ D + MI + K+E+ + +M M +P Y +LN LG
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 393 ELAAAKL 399
+L A++
Sbjct: 320 KLIHARI 326
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 197/356 (55%), Gaps = 9/356 (2%)
Query: 23 GNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN-DMLSSGNEPDETTWVTV 81
G + A + F+++ S +WN M+ + + E + LF M+S ++ D+ T+ V
Sbjct: 66 GETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV 125
Query: 82 ISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRN 141
I +C + L + K F ++ F + L+D++ KCG + +++FD++ R+
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPG-RS 184
Query: 142 SVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMIS 201
VS M+ L A +FN+MP R+ VSW +MI Y +N A +LF+ M
Sbjct: 185 IVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRM-Q 243
Query: 202 TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSME 261
+D KP+E T+V++ A LGSLS+G W ++ L +LI MYS+CGS++
Sbjct: 244 VDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQ 303
Query: 262 EATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG-IEPDRITYIGILTAC 320
+A +F M + L ++N++I+ L HG G E + L +M+E+ +EPD IT++G+L+AC
Sbjct: 304 DARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSAC 363
Query: 321 SHAGLLEEGQKVFES-IKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEP 371
++ G +++G + F I+V P +H ACMI +L + ++E+A L+ SM +P
Sbjct: 364 ANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDP 419
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 112/225 (49%), Gaps = 32/225 (14%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P R++V+WTTM+ G + L +A I F++MP R+VVSW AM++ Y ++ E +LF
Sbjct: 181 PGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFR 240
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
M +P+E T V ++ + + LG + + K F + F+ TAL+DM++KCG
Sbjct: 241 RMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCG 300
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+L+ A+++FD M + +WNSMI
Sbjct: 301 SLQDARKVFD--------------------------------VMQGKSLATWNSMITSLG 328
Query: 185 QNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGI 229
+G A+ LF+EM +PD +T V V SAC + G++ G+
Sbjct: 329 VHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGL 373
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 135/317 (42%), Gaps = 47/317 (14%)
Query: 108 SNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDL 164
++YF++T C N ++I ++ + + + +IS + G+ +A +
Sbjct: 23 ASYFLRT--------CSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLV 74
Query: 165 FNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGS 224
FN++ T +WN MI + N + A+ LF M+ ++ S+ D+ T V AC S
Sbjct: 75 FNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSS 134
Query: 225 LSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISG 284
+ LG + + + N+L+ +Y +CG + +F +M R +VS+ T++ G
Sbjct: 135 IRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 194
Query: 285 LASHGH-------------------------------GIECIKLISKMKEDGIEPDRITY 313
L S+ E +L +M+ D ++P+ T
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTI 254
Query: 314 IGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
+ +L A + G L G+ V + V D +IDM + G L++A K+ M
Sbjct: 255 VNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQG 314
Query: 370 EPHAGIYGSLLNATRIH 386
+ A + S++ + +H
Sbjct: 315 KSLA-TWNSMITSLGVH 330
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 210/442 (47%), Gaps = 61/442 (13%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F+ + +++V+WN+M++ + + + +F M S G D T + + SS D
Sbjct: 218 FEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDL 277
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
E V L +H+ + + G+ + A+I
Sbjct: 278 VPNE----------------VSKCCLQLHS----------LTVKSGLVTQTEVATALIKV 311
Query: 152 YAR-LGDLSFARDLFNKMPE-RDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDE 209
Y+ L D + LF +M RD V+WN +I +A AI LF ++ S PD
Sbjct: 312 YSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPE-RAIHLFGQLRQEKLS-PDW 369
Query: 210 LTMVSVFSACG-----------HLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCG 258
T SV AC H + G A ++LN NSLI Y++CG
Sbjct: 370 YTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLN-----------NSLIHAYAKCG 418
Query: 259 SMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILT 318
S++ +F +M +RD+VS+N+++ + HG + + KM I PD T+I +L+
Sbjct: 419 SLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLS 475
Query: 319 ACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHA 373
ACSHAG +EEG ++F S+ +P ++HYAC+IDML R + EA ++I MPM+P A
Sbjct: 476 ACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDA 535
Query: 374 GIYGSLLNATRIHKQVELGELAAAKLFT-VEPHNSSNYVLLSNIYALAGRWKEVGNVRNI 432
++ +LL + R H LG+LAA KL VEP NS +Y+ +SNIY G + E
Sbjct: 536 VVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKE 595
Query: 433 MRKQGVKKITAWSWVEHPSHVH 454
M V+K SW E + VH
Sbjct: 596 METWRVRKEPDLSWTEIGNKVH 617
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 202/450 (44%), Gaps = 74/450 (16%)
Query: 1 MMGEP---QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAAL 57
M+ P +NV+ ++ YAK GN+ AR FD MPER+VVSW A+++GY Q+G
Sbjct: 85 MLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQ 144
Query: 58 ETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALL 117
E LF+ MLS P+E T +V++SC +P + + K+ H + +V A++
Sbjct: 145 EGFCLFSSMLSHCF-PNEFTLSSVLTSCRY--EP--GKQVHGLALKLGLHCSIYVANAVI 199
Query: 118 DMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWN 177
M+ +C + AA E A +F + ++ V+WN
Sbjct: 200 SMYGRCHDGAAAYE-----------------------------AWTVFEAIKFKNLVTWN 230
Query: 178 SMIAGYAQNGESLMAIKLFKEM--------------ISTNDSKPDELTMVSVFSACGHLG 223
SMIA + AI +F M I ++ K +L V C L
Sbjct: 231 SMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLH 290
Query: 224 SLSLGIWAVSILNEYQIKLSILG-YNSLIFMYSRCGSMEEATLIFQEMA-TRDLVSYNTL 281
SL++ ++ + ++ +++ Y+ ++ Y+ C + F EM+ RD+V++N +
Sbjct: 291 SLTV---KSGLVTQTEVATALIKVYSEMLEDYTDCYKL------FMEMSHCRDIVAWNGI 341
Query: 282 ISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGL------LEEGQKVFES 335
I+ A + I L +++++ + PD T+ +L AC AGL L +V +
Sbjct: 342 ITAFAVYDPE-RAIHLFGQLRQEKLSPDWYTFSSVLKAC--AGLVTARHALSIHAQVIKG 398
Query: 336 IKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELA 395
+ D +I + G L+ M++ M + S+L A +H QV+ L
Sbjct: 399 GFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVS-WNSMLKAYSLHGQVD-SILP 456
Query: 396 AAKLFTVEPHNSSNYVLLSNIYALAGRWKE 425
+ + P +S+ ++ L + + AGR +E
Sbjct: 457 VFQKMDINP-DSATFIALLSACSHAGRVEE 485
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 185 QNGESLMAIKLFKEMISTNDSKPDEL----TMVSVFSACGHLGSLSLGI--WAVSILNEY 238
++G+ A+ LF S P EL ++F AC +L GI + + Y
Sbjct: 38 RSGDIRRAVSLFY-------SAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPY 90
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLI 298
+++ N LI MY++CG++ A +F M R++VS+ LI+G G+ E L
Sbjct: 91 CYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF 150
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
S M P+ T +LT+C + E G++V
Sbjct: 151 SSMLSHCF-PNEFTLSSVLTSCRY----EPGKQV 179
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 215/446 (48%), Gaps = 46/446 (10%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSG---AALET 59
G + N+V W +++ Y + G A F M +R VVSWN ++ + SG AL+
Sbjct: 163 GVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQ 222
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
L +M +PDE T V+S CS L + + + K+ F SN V A +DM
Sbjct: 223 FWLMREM---EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDM 279
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
+KC RL D + LF ++ + D+V NSM
Sbjct: 280 FSKCN-----------------------------RLDD---SVKLFRELEKWDSVLCNSM 307
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQ 239
I Y+ + A++LF + T +PD+ T SV S+ + L G S++ +
Sbjct: 308 IGSYSWHCCGEDALRLFI-LAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLG 365
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLIS 299
L SL+ MY + GS++ A +F + +DL+ +NT+I GLA + +E + + +
Sbjct: 366 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 425
Query: 300 KM-KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-----PDVDHYACMIDMLGR 353
++ ++PDR+T +GIL AC +AG + EG ++F S++ P +HYAC+I++L R
Sbjct: 426 QLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCR 485
Query: 354 VGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLL 413
VG + EA + +P EP + I+ +L A+ L E A + EP +S Y++L
Sbjct: 486 VGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVL 545
Query: 414 SNIYALAGRWKEVGNVRNIMRKQGVK 439
IY + RW+ +R M + +K
Sbjct: 546 IKIYEMTWRWENSVKLRYAMNEHKLK 571
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 158/339 (46%), Gaps = 58/339 (17%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P +N +TW + G K+G L A FD+MPER VVSWN M+SG G +R+F
Sbjct: 66 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 65 DMLSSGNEPDETTWVTVIS--SCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
DM P E T+ + S +C G+ + H N A
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGE--------------QIHGN-----------AI 160
Query: 123 CGNLKAAQEIFDQLGVYR-NSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
C GV R N V N+++ Y RLG +A +F M +RD VSWN +I
Sbjct: 161 CS------------GVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLIL 208
Query: 182 GYAQNGESLMAIKLF---KEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+ +G +A+ F +EM + +PDE T+ V S C L LS G A+++
Sbjct: 209 SCSDSGNKEVALDQFWLMREM----EIQPDEYTVSMVVSICSDLRELSKGKQALALC--- 261
Query: 239 QIKLSILGYNSLIF-----MYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIE 293
IK+ L NS++ M+S+C ++++ +F+E+ D V N++I + H G +
Sbjct: 262 -IKMGFLS-NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGED 319
Query: 294 CIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
++L + PD+ T+ +L++ +A +L+ G V
Sbjct: 320 ALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADV 357
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 225/452 (49%), Gaps = 53/452 (11%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N+ +V Y+ G+L + F+ +PE+ V+SWN+++S A G+ L+++ LF+ M
Sbjct: 248 NIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQ 307
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFH-SNYFVKTALLDMHAKCGNL 126
G P +++ ++ CS D + I + K+ F S+ V++AL+DM+ KC +
Sbjct: 308 FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGI 367
Query: 127 KAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQN 186
+ + ++ L N CN+++++ G +D+
Sbjct: 368 ENSALLYQSLPCL-NLECCNSLMTSLMHCG---ITKDI---------------------- 401
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACG-----HLGSLSLGIWAVSILNEYQIK 241
I++F MI + DE+T+ +V A L S +L + +I + Y
Sbjct: 402 ------IEMFGLMIDEG-TGIDEVTLSTVLKALSLSLPESLHSCTL-VHCCAIKSGYAAD 453
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
+++ SLI Y++ G E + +F E+ T ++ ++I+G A +G G +C+K++ +M
Sbjct: 454 VAV--SCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREM 511
Query: 302 KEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGK 356
+ PD +T + +L+ CSH+GL+EEG+ +F+S++ P YACM+D+LGR G
Sbjct: 512 DRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGL 571
Query: 357 LEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNI 416
+E+A +L+ + + SLL + RIH+ +G AA L +EP N + Y+ +S
Sbjct: 572 VEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKF 631
Query: 417 YALAGRW------KEVGNVRNIMRKQGVKKIT 442
Y G + +E+ R +MR+ G +
Sbjct: 632 YFEIGDFEISRQIREIAASRELMREIGYSSVV 663
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 172/373 (46%), Gaps = 45/373 (12%)
Query: 5 PQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFN 64
P V T + KSGNL +A FD+M R VV++N ++SG ++ G +L + L+
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYA 101
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVR---KLDKVKFHSNYFVKTALLDMHA 121
+M+S G +T+ +V+S CS D ++ ++ + F N FV++AL+ ++A
Sbjct: 102 EMVSCGLRESASTFPSVLSVCS---DELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA 158
Query: 122 KCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIA 181
+ A ++FD++ + RN CN ++ + + G+ +++ +M +
Sbjct: 159 CLRLVDVALKLFDEM-LDRNLAVCNLLLRCFCQTGESKRLFEVYLRME----------LE 207
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
G A+NG LT + C H + G S++ +
Sbjct: 208 GVAKNG----------------------LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWN 245
Query: 242 LS-ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISK 300
+S I N L+ YS CG + + F + +D++S+N+++S A +G ++ + L SK
Sbjct: 246 ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSK 305
Query: 301 MKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVG 355
M+ G P ++ L CS ++ G+++ + V + + +IDM G+
Sbjct: 306 MQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCN 365
Query: 356 KLEEAMKLIHSMP 368
+E + L S+P
Sbjct: 366 GIENSALLYQSLP 378
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 129/291 (44%), Gaps = 37/291 (12%)
Query: 2 MGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVR 61
MG ++ + ++ Y K ++ + + + +P ++ N++++ G + +
Sbjct: 344 MGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIE 403
Query: 62 LFNDMLSSGNEPDETTWVTVISSCS-SLGDPCLAESIVRKLD-KVKFHSNYFVKTALLDM 119
+F M+ G DE T TV+ + S SL + + ++V K + ++ V +L+D
Sbjct: 404 MFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDA 463
Query: 120 HAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
+ K G + ++++FD+L P + S+
Sbjct: 464 YTKSGQNEVSRKVFDELDT------------------------------P--NIFCLTSI 491
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG-IWAVSILNEY 238
I GYA+NG +K+ +EM N PDE+T++SV S C H G + G + S+ ++Y
Sbjct: 492 INGYARNGMGTDCVKMLREMDRMN-LIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKY 550
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEA-TLIFQEMATRDLVSYNTLISGLASH 288
I Y ++ + R G +E+A L+ Q D V++++L+ H
Sbjct: 551 GISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIH 601
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 228/457 (49%), Gaps = 68/457 (14%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
++ T ++ Y+K G+L + F+ + E+ +VSWNA+LSG+ ++G E + +F M
Sbjct: 120 ISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRE 179
Query: 70 GNEPDETTWVTVISSCSSL-----GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
E E T +V+ +C+SL G A +V D V + TA++ ++ G
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLV------VLGTAMISFYSSVG 233
Query: 125 NLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYA 184
+ A ++++ L V+ D V NS+I+G
Sbjct: 234 LINEAMKVYNSLNVH-------------------------------TDEVMLNSLISGCI 262
Query: 185 QNGESLMAIKLFKE-MISTNDSKPDELTMVSVFSACGHLGSLSLG--IWAVSILNEYQIK 241
+N + +KE + + +P+ + S + C L +G I V++ N +
Sbjct: 263 RN-------RNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSD 315
Query: 242 LSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKM 301
+ N L+ MY +CG + +A IF+ + ++ +VS+ ++I A +G G++ +++ +M
Sbjct: 316 SKLC--NGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREM 373
Query: 302 KED--GIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRV 354
E+ G+ P+ +T++ +++AC+HAGL++EG++ F +K VP +HY C ID+L +
Sbjct: 374 CEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKA 433
Query: 355 GKLEEAMKLIHSMPMEPH-----AGIYGSLLNATRIHKQVELGELAAAKLF-TVEPHNSS 408
G+ EE +L+ M ME I+ ++L+A ++ + GE A +L P N+S
Sbjct: 434 GETEEIWRLVERM-MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENAS 492
Query: 409 NYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWS 445
YVL+SN YA G+W V +R ++ +G+ K S
Sbjct: 493 IYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 151/342 (44%), Gaps = 44/342 (12%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
FD++P+R + S N+ LS + +SG +T+ LF + + + T+ V+ +CS L P
Sbjct: 41 FDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYP 100
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISA 151
+ + K + KTAL+DM++K G+L + +F+ +
Sbjct: 101 ETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESV--------------- 145
Query: 152 YARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
E+D VSWN++++G+ +NG+ A+ +F M + E T
Sbjct: 146 -----------------EEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER-VEISEFT 187
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
+ SV C L L G +++ L +LG ++I YS G + EA ++ +
Sbjct: 188 LSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLG-TAMISFYSSVGLINEAMKVYNSLN 246
Query: 272 TR-DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQ 330
D V N+LISG + + E L+S+ + P+ L CS L G+
Sbjct: 247 VHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGK 301
Query: 331 KV----FESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
++ + V D ++DM G+ G++ +A + ++P
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP 343
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 8/227 (3%)
Query: 161 ARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPD--ELTMVSVFSA 218
A LF+++P+RD S NS ++ + ++G + LF + + + PD T V A
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALF---LQIHRASPDLSSHTFTPVLGA 93
Query: 219 CGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSY 278
C L G +++ + + + +LI MYS+ G + ++ +F+ + +DLVS+
Sbjct: 94 CSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSW 153
Query: 279 NTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV 338
N L+SG +G G E + + + M + +E T ++ C+ +L++G++V + V
Sbjct: 154 NALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVV 213
Query: 339 PDVDHY---ACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNA 382
D MI VG + EAMK+ +S+ + + SL++
Sbjct: 214 TGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISG 260
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 191/365 (52%), Gaps = 37/365 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
N++ +++V YA+ G L +A FD M E+ V+SW A++S ++ G ++ + +F ML
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ P+E T +++ +CS + + K ++ FV T+L+DM+AKCG
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG--- 333
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
++S R +F+ M R+TV+W S+IA +A+ G
Sbjct: 334 -----------------------------EISDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
AI LF+ ++ + LT+VS+ ACG +G+L LG + + + I+ ++
Sbjct: 365 FGEEAISLFR-IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIG 423
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
++L+++Y +CG +A + Q++ +RD+VS+ +ISG +S GH E + + +M ++G+E
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVE 483
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKL 363
P+ TY L AC+++ L G+ + K + +V + +I M + G + EA ++
Sbjct: 484 PNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRV 543
Query: 364 IHSMP 368
SMP
Sbjct: 544 FDSMP 548
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 150/322 (46%), Gaps = 33/322 (10%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFND 65
+ +V T+++ YAK G + R FD M R+ V+W ++++ +A+ G E + LF
Sbjct: 316 KTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRI 375
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M + T V+++ +C S+G L + + ++ K N ++ + L+ ++ KCG
Sbjct: 376 MKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGE 435
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+ A + QL P RD VSW +MI+G +
Sbjct: 436 SRDAFNVLQQL--------------------------------PSRDVVSWTAMISGCSS 463
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
G A+ KEMI +P+ T S AC + SL +G SI + ++
Sbjct: 464 LGHESEALDFLKEMIQEG-VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF 522
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDG 305
++LI MY++CG + EA +F M ++LVS+ +I G A +G E +KL+ +M+ +G
Sbjct: 523 VGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG 582
Query: 306 IEPDRITYIGILTACSHAGLLE 327
E D + IL+ C L E
Sbjct: 583 FEVDDYIFATILSTCGDIELDE 604
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 9/243 (3%)
Query: 129 AQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGE 188
A + FD +Y N +IS+ RLGDL +AR +F+ MPE++TV+W +MI GY + G
Sbjct: 108 ALKCFDDQVIYFG----NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 189 SLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYN 248
A LF++ + +E V + + C LG + + + +++ +
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVES 222
Query: 249 SLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEP 308
SL++ Y++CG + A F M +D++S+ +IS + GHGI+ I + M P
Sbjct: 223 SLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP 282
Query: 309 DRITYIGILTACSHAGLLEEGQK----VFESIKVPDVDHYACMIDMLGRVGKLEEAMKLI 364
+ T IL ACS L G++ V + + DV ++DM + G++ + K+
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 365 HSM 367
M
Sbjct: 343 DGM 345
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 200/402 (49%), Gaps = 27/402 (6%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKM----PERSVVSWNAMLSGYAQSGAALET 59
EP ++VT ++++ GY + A D+M + + V++N ++ G A E
Sbjct: 147 EP--DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M++ G +PD T+ TV++ GD LA S+++K++K K ++ + T ++D
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 120 HAKCGNLKAAQEIF---DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
N+ A +F D G+ N V+ N++I G S A L + M ER +
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 324
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLGIWA 231
V+++++I + + G+ + A KL+ EMI + PD T S+ + C H L
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMH-DRLDEAKHM 382
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLAS 287
++ +++ YN+LI + + +EE +F+EM+ R L V+YNTLI GL
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDH 343
G K+ KM DG+ PD ITY +L G LE+ VFE ++ PD+
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 344 YACMIDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNA 382
Y MI+ + + GK+E+ L S+ + +P+ IY ++++
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 166/384 (43%), Gaps = 55/384 (14%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALE 58
G+ + +VV +TT++ N+ A F +M + +VV++N+++ G +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 59 TVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLD 118
RL +DM+ P+ T+ +I + G AE + ++ K + F ++L++
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 119 ---MHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER---- 171
MH + K E+ + N V+ N +I + + + +LF +M +R
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 172 DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA 231
+TV++N++I G Q G+ MA K+FK+M+S D P +
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVS--DGVPPD---------------------- 464
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLAS 287
I+ Y+ L+ + G +E+A ++F+ + D+ +YN +I G+
Sbjct: 465 ------------IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDH 343
G + L + G++P+ I Y +++ GL EE +F +K +P+
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 344 YACMIDMLGRVGKLEEAMKLIHSM 367
Y +I R G + +LI M
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEM 596
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 160/354 (45%), Gaps = 38/354 (10%)
Query: 15 MVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
++ Y K G++ + R F +R+ +SW A++SGYA +G + +R M G PD
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPD 417
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFD 134
T TV+ C+ L + I K F N + T+L+ M++KCG +
Sbjct: 418 VVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPE------- 470
Query: 135 QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIK 194
+ LF+++ +R+ +W +MI Y +N + I+
Sbjct: 471 -------------------------YPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIE 505
Query: 195 LFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMY 254
+F+ M+ + +PD +TM V + C L +L LG + + + + +I MY
Sbjct: 506 VFRLML-LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMY 564
Query: 255 SRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
+CG + A F +A + +++ +I + + I +M G P+ T+
Sbjct: 565 GKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFT 624
Query: 315 GILTACSHAGLLEEGQKVFESI-----KVPDVDHYACMIDMLGRVGKLEEAMKL 363
+L+ CS AG ++E + F + P +HY+ +I++L R G++EEA +L
Sbjct: 625 AVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 166/367 (45%), Gaps = 49/367 (13%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNE 72
T +V Y G++K A+ FD+ +V SWNA+L G SG + + D+LS+ E
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGK-----KRYQDVLSTFTE 204
Query: 73 PDETTWVTVISSCSSLGDPCLAESIVRKLDKVK-------FHSNYFVKTALLDMHAKCGN 125
E + S S++ S +R+ K ++ F+KT+L+DM+ KCG
Sbjct: 205 MRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGK 264
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+ A+ +FD++ ERD V W +MIAG A
Sbjct: 265 VGLARRVFDEI--------------------------------VERDIVVWGAMIAGLAH 292
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA-VSILNEYQIKLSI 244
N A+ LF+ MIS P+ + + ++ G + +L LG +L
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 245 LGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKED 304
++ LI +Y +CG M +F R+ +S+ L+SG A++G + ++ I M+++
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 305 GIEPDRITYIGILTACSHAGLLEEGQKV----FESIKVPDVDHYACMIDMLGRVGKLEEA 360
G PD +T +L C+ +++G+++ +++ +P+V ++ M + G E
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYP 472
Query: 361 MKLIHSM 367
++L +
Sbjct: 473 IRLFDRL 479
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 34/257 (13%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
NV T+++ Y+K G + FD++ +R+V +W AM+ Y ++ + +F ML
Sbjct: 452 NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLML 511
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
S + PD T V++ CS L L + + + K +F S FV ++ M+ KCG+L+
Sbjct: 512 LSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLR 571
Query: 128 AAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNG 187
+A FD + V + +++W ++I Y N
Sbjct: 572 SANFSFDAVAV--------------------------------KGSLTWTAIIEAYGCNE 599
Query: 188 ESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI-LNEYQIKLSILG 246
AI F++M+S + P+ T +V S C G + ++ L Y ++ S
Sbjct: 600 LFRDAINCFEQMVSRGFT-PNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEH 658
Query: 247 YNSLIFMYSRCGSMEEA 263
Y+ +I + +RCG +EEA
Sbjct: 659 YSLVIELLNRCGRVEEA 675
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 107/235 (45%), Gaps = 46/235 (19%)
Query: 106 FHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLF 165
SN F++T L+ M+ CG++K AQ++FD+ S S N
Sbjct: 142 LESNEFLRTKLVHMYTACGSVKDAQKVFDE------STSSNVY----------------- 178
Query: 166 NKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDEL-------TMVSVFSA 218
SWN+++ G +G+ K +++++ST ++ EL ++ +VF +
Sbjct: 179 ---------SWNALLRGTVISGK-----KRYQDVLSTF-TEMRELGVDLNVYSLSNVFKS 223
Query: 219 CGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSY 278
+L G+ ++ + + S+ SL+ MY +CG + A +F E+ RD+V +
Sbjct: 224 FAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVW 283
Query: 279 NTLISGLASHGHGIECIKLISKM-KEDGIEPDRITYIGILTACSHAGLLEEGQKV 332
+I+GLA + E + L M E+ I P+ + IL L+ G++V
Sbjct: 284 GAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 208/456 (45%), Gaps = 28/456 (6%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
++VT+ T+++ Y+ G ++ A + MP + V ++N +++G + G +F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+ML SG PD TT+ +++ GD E + + + ++++ + +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
GNL A F+ + G+ ++V +I Y R G +S A +L N+M ++ D V++
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N+++ G + A KLF EM + PD T+ + LG+L + +
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEM-TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLASHGHGI 292
E +I+L ++ YN+L+ + + G ++ A I+ +M ++++ +SY+ L++ L S GH
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMI 348
E ++ +M I+P + ++ +G +G+ E + VPD Y +I
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 349 DMLGRVGKLEEAMKLIHSMPME-----PHAGIYGSLLNATRIHKQVELGELAAAKLFT-- 401
R + +A L+ M E P Y S+L+ Q++ E+ K+
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 402 VEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQG 437
V P + S Y + N + E + + M ++G
Sbjct: 688 VNP-DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/447 (21%), Positives = 182/447 (40%), Gaps = 75/447 (16%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVS---------------------WNAMLS 48
++ + M+ +SG L A+ +M RS VS ++ ++
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173
Query: 49 GYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHS 108
Y Q+ E F + S G +I S +G LA + +++ +
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 109 NYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLF 165
N + +++ K G ++ Q+ GVY + V+ N +ISAY+ G + A +L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 166 NKMPERD----TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGH 221
N MP + ++N++I G ++G+ A ++F EM+ + S PD T S+
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS-PDSTTYRSLLMEACK 352
Query: 222 LGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIF-------------- 267
G + S + + ++ ++S++ +++R G++++A + F
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 268 -------------------------QEMATRDLVSYNTLISGLASHGHGIECIKLISKMK 302
Q+ D+V+YNT++ GL E KL ++M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDHYACMIDMLGRVGKLE 358
E + PD T ++ G L+ ++F+ +K DV Y ++D G+VG ++
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 359 EAMKL---IHSMPMEPHAGIYGSLLNA 382
A ++ + S + P Y L+NA
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNA 559
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 193/397 (48%), Gaps = 22/397 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
++VT +++ G+ + A D+M E V++ ++ G Q A E V L
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M+ G +PD T+ VI+ G+P LA +++ K++K K ++ + ++D K
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
++ A ++F+++ G+ + + N +IS G S A L + M E+ D V +
Sbjct: 264 KHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFF 323
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N++I + + G+ + A KL+ EM+ + PD + ++ + G+ ++
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ + + + Y +LI + + + A ++F++M + D+++YN L+ GL ++G+
Sbjct: 384 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVE 443
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMI 348
+ + M++ ++ D +TY ++ A AG +E+G +F S+ + P+V Y M+
Sbjct: 444 TALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMM 503
Query: 349 DMLGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNA 382
R G EEA L M + P++G Y +L+ A
Sbjct: 504 SGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 159/373 (42%), Gaps = 51/373 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVR 61
Q ++VT+ ++ G K G A +KM E VV +N ++ G + +
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LFN M + G +PD T+ +IS + G A ++ + + + + AL+D
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 122 KCGNLKAAQEIFDQL----GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DT 173
K G L A++++D++ + + V+ N +I + + + ++F +M +R +T
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMIS-------------------------------- 201
V++ ++I G+ Q + A +FK+M+S
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 202 --TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
D K D +T ++ A G + G L+ +K +++ Y +++ + R G
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGL 511
Query: 260 MEEATLIFQEMATRDLV----SYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
EEA +F EM + +YNTLI G +LI +M+ G D T+ G
Sbjct: 512 KEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-G 570
Query: 316 ILTACSHAGLLEE 328
++T H G L++
Sbjct: 571 LVTNMLHDGRLDK 583
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 192/402 (47%), Gaps = 27/402 (6%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKM----PERSVVSWNAMLSGYAQSGAALET 59
EP N+VT ++++ GY S + A D+M + + V++N ++ G A E
Sbjct: 148 EP--NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA 205
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
+ L + M++ G +PD T+ V++ GD LA +++ K+++ K + ++D
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
K ++ A +F ++ G+ N V+ +++IS G S A L + M ER D
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLGIWA 231
+++++I + + G+ + A KL+ EM+ + P +T S+ + C H L
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRS-IDPSIVTYSSLINGFCMH-DRLDEAKQM 383
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLAS 287
+ ++ YN+LI + + +EE +F+EM+ R L V+YN LI GL
Sbjct: 384 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDH 343
G ++ +M DG+ P+ +TY +L G LE+ VFE ++ P +
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 503
Query: 344 YACMIDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNA 382
Y MI+ + + GK+E+ L ++ + +P Y ++++
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 170/382 (44%), Gaps = 51/382 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVR 61
Q ++VT+ +V G K G+ A +KM E V+ +N ++ G + + +
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M + G P+ T+ ++IS + G A ++ + + K + + F +AL+D
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 122 KCGNLKAAQEIFDQL--------------------------------------GVYRNSV 143
K G L A++++D++ + + V
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 397
Query: 144 SCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEM 199
+ N +I + + + ++F +M +R +TV++N +I G Q G+ MA ++FKEM
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
+S + P+ +T ++ G L + L +++ +I YN +I + G
Sbjct: 458 VS-DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 260 MEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+E+ +F ++ + D+V+YNT+ISG G E L +MKEDG P+ Y
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 316 ILTACSHAGLLEEGQKVFESIK 337
++ A G E ++ + ++
Sbjct: 577 LIRARLRDGDREASAELIKEMR 598
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 194/402 (48%), Gaps = 27/402 (6%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP ++VT ++++ GY + A D+M E +++ ++ G A E
Sbjct: 152 EP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M+ G +P+ T+ V++ GD LA +++ K++ K ++ + ++D
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
K ++ A +F ++ G+ N V+ +++IS G S A L + M E+ +
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLGIWA 231
V++N++I + + G+ + A KL+ +MI + PD T S+ + C H L
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRS-IDPDIFTYNSLVNGFCMH-DRLDKAKQM 387
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLAS 287
+ ++ YN+LI + + +E+ T +F+EM+ R D V+Y TLI GL
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDH 343
G K+ +M DG+ PD +TY +L + G LE+ +VF+ ++ D+
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 344 YACMIDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNA 382
Y MI+ + + GK+++ L S+ + +P+ Y ++++
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 160/364 (43%), Gaps = 51/364 (14%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVR 61
Q N+VT+ +V G K G+ A +KM E VV +N ++ + + +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 281
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M + G P+ T+ ++IS S G A ++ + + K + N AL+D
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 122 KCGNLKAAQEIFDQL--------------------------------------GVYRNSV 143
K G A++++D + + + V
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV 401
Query: 144 SCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEM 199
+ N +I + + + +LF +M R DTV++ ++I G +G+ A K+FK+M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
+S + PD +T + + G L + + + +IKL I Y ++I + G
Sbjct: 462 VS-DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 260 MEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+++ +F ++ + ++V+YNT+ISGL S E L+ KMKEDG P+ TY
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 316 ILTA 319
++ A
Sbjct: 581 LIRA 584
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 190/391 (48%), Gaps = 32/391 (8%)
Query: 11 TWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLFNDM 66
T+TT++ GY + G+L A ++M E S VS N ++ G+ + G + + +M
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 67 LSS-GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
+ G PD+ T+ T+++ G A I+ + + + + + +++ K G
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 126 LKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLS----FARDLFNKMPERDTVSWNS 178
+K A E+ DQ+ N+V+ N +IS + + AR L +K D ++NS
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+I G +A++LF+EM S +PDE T + + G L A+++L +
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKG-CEPDEFTYNMLIDSLCSKGKLD---EALNMLKQM 461
Query: 239 QIK---LSILGYNSLIFMYSRCGSMEEATLIFQEM----ATRDLVSYNTLISGLASHGHG 291
++ S++ YN+LI + + EA IF EM +R+ V+YNTLI GL
Sbjct: 462 ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRV 521
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACM 347
+ +L+ +M +G +PD+ TY +LT G +++ + +++ PD+ Y +
Sbjct: 522 EDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 348 IDMLGRVGKLEEAMKLIHSMPME-----PHA 373
I L + G++E A KL+ S+ M+ PHA
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 176/394 (44%), Gaps = 28/394 (7%)
Query: 12 WTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+ M+ +LK I KM + V ++N ++ ++ + + DM
Sbjct: 157 YNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC--GN 125
S G PDE T+ TV+ GD A I ++ V+F ++ + + +H C G
Sbjct: 217 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM--VEFGCSWSNVSVNVIVHGFCKEGR 274
Query: 126 LKAA----QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWN 177
++ A QE+ +Q G + + + N +++ + G + A ++ + M + D ++N
Sbjct: 275 VEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 178 SMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE 237
S+I+G + GE A+++ +MI T D P+ +T ++ S + +L
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMI-TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS 393
Query: 238 YQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIE 293
I + +NSLI + A +F+EM ++ D +YN LI L S G E
Sbjct: 394 KGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDE 453
Query: 294 CIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH----YACMID 349
+ ++ +M+ G ITY ++ A E +++F+ ++V V Y +ID
Sbjct: 454 ALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLID 513
Query: 350 MLGRVGKLEEAMKLIHSMPME---PHAGIYGSLL 380
L + ++E+A +L+ M ME P Y SLL
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 18/319 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTA----RIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
N VT+ T+++ K ++ A R+ K V ++N+++ G + + LF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+M S G EPDE T+ +I S S G A +++++++ + L+D K
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKM----PERDTVSW 176
+ A+EIFD++ GV RNSV+ N +I + + A L ++M + D ++
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
NS++ + + G+ A + + M S N +PD +T ++ S G + + + +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTS-NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM-----ATRDLVSYNTLISGLASHGHG 291
I L+ YN +I R EA +F+EM A D VSY + GL + G
Sbjct: 603 MKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGP 662
Query: 292 I-ECIKLISKMKEDGIEPD 309
I E + + ++ E G P+
Sbjct: 663 IREAVDFLVELLEKGFVPE 681
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 20/285 (7%)
Query: 172 DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA 231
D ++N +I + + AI + ++M S PDE T +V G L +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYG-LVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRD-----LVSYNTLISGLA 286
+ E+ S + N ++ + + G +E+A QEM+ +D ++NTL++GL
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVD 342
GH I+++ M ++G +PD TY +++ G ++E +V + + P+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 343 HYACMIDMLGRVGKLEEAMKL---IHSMPMEPHAGIYGSLLNA---TRIHK-QVELGELA 395
Y +I L + ++EEA +L + S + P + SL+ TR H+ +EL E
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 396 AAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKK 440
+K EP + Y +L + G+ E N+ M G +
Sbjct: 427 RSK--GCEP-DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCAR 468
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 46/221 (20%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVRL 62
R+V+T+ T++ G+ K+ + A FD+M R+ V++N ++ G +S + +L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
+ M+ G +PD+ T+ +LL +
Sbjct: 528 MDQMIMEGQKPDKYTY-----------------------------------NSLLTHFCR 552
Query: 123 CGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTV----S 175
G++K A +I + G + V+ +IS + G + A L + + +
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVF 216
+N +I G + ++ AI LF+EM+ N++ PD ++ VF
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVF 653
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 186/395 (47%), Gaps = 63/395 (15%)
Query: 13 TTMVTGYAKSGNLKTARIYFDKMPE----RSVVSWNAMLSGYAQSGAALETVRLFNDMLS 68
+ M++ + G + A+ F+ +V +++A++S Y +SG E + +FN M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVK---FHSNYFVKTALLDMHAKCGN 125
G P+ T+ VI +C G + + + D+++ + +LL + ++ G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGG--MEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 126 LKAAQEIFDQLGVYR---NSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNS 178
+AA+ +FD++ R + S N ++ A + G + A ++ +MP + + VS+++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+I G+A+ G A+ LF EM +LG
Sbjct: 415 VIDGFAKAGRFDEALNLFGEM--------------------RYLG--------------- 439
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMAT----RDLVSYNTLISGLASHGHGIEC 294
I L + YN+L+ +Y++ G EEA I +EMA+ +D+V+YN L+ G G E
Sbjct: 440 -IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDM 350
K+ ++MK + + P+ +TY ++ S GL +E ++F K DV Y+ +ID
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 351 LGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNA 382
L + G + A+ LI M E P+ Y S+++A
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDA 593
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 21/215 (9%)
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMA----TRDLVSYNTLISGLASHGHGIECI-KL 297
++ +++LI Y R G EEA +F M +LV+YN +I G + + K
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 298 ISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGR 353
+M+ +G++PDRIT+ +L CS GL E + +F+ + DV Y ++D + +
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 354 VGKLEEAMKLIHSMPME---PHAGIYGSLLN----ATRIHKQVEL-GELAAAKLFTVEPH 405
G+++ A +++ MP++ P+ Y ++++ A R + + L GE+ + +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM---RYLGIALD 443
Query: 406 NSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKK 440
S LLS IY GR +E ++ M G+KK
Sbjct: 444 RVSYNTLLS-IYTKVGRSEEALDILREMASVGIKK 477
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 155/358 (43%), Gaps = 24/358 (6%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVR 61
+++V ++ T++ K G + A +MP + +VVS++ ++ G+A++G E +
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALN 430
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M G D ++ T++S + +G A I+R++ V + ALL +
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 122 KCGNLKAAQEIFDQLG---VYRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERDTV 174
K G +++F ++ V N ++ + +I Y++ G A ++F + D V
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVV 550
Query: 175 SWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI 234
++++I +NG A+ L EM S P+ +T S+ A G ++ +
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMTKEGIS-PNVVTYNSIIDAFGRSATMDR---SADY 606
Query: 235 LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIEC 294
N + S ++L + E + Q S N + C
Sbjct: 607 SNGGSLPFSSSALSAL--------TETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSC 658
Query: 295 I-KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDML 351
I ++ KM + I+P+ +T+ IL ACS E+ + E +++ D Y + +L
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLL 716
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 188/398 (47%), Gaps = 25/398 (6%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
++VT +++ G+ + A D+M E V++ ++ G Q A E V L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M+ G +PD T+ VI+ G+P LA +++ K++K K ++ + + ++D K
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKY 253
Query: 124 GNLKAAQEIF---DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
++ A +F D G+ + + +++IS G S A L + M ER + V++
Sbjct: 254 RHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTF 313
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLGIWAVSIL 235
NS+I +A+ G+ + A KLF EMI + P+ +T S+ + C H L +++
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRS-IDPNIVTYNSLINGFCMH-DRLDEAQQIFTLM 371
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLASHGHG 291
++ YN+LI + + + + +F++M+ R L V+Y TLI G
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACM 347
+ +M DG+ P+ +TY +L G LE+ VFE ++ PD+ Y M
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491
Query: 348 IDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNA 382
+ + + GK+E+ L S+ + +P Y ++++
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 174/407 (42%), Gaps = 57/407 (14%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVR 61
Q ++VT+ ++ G K G A +KM E VV ++ ++ + + +
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M + G PD T+ ++IS + G A ++ + + K + N +L+D A
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERD------ 172
K G L A+++FD++ + N V+ N++I+ + L A+ +F M +D
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 173 ---------------------------------TVSWNSMIAGYAQNGESLMAIKLFKEM 199
TV++ ++I G+ Q + A +FK+M
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
+S + P+ +T ++ G L + L + +++ I YN + + G
Sbjct: 442 VS-DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 260 MEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+E+ +F ++ + D+++YNT+ISG G E L KMKEDG PD TY
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 316 ILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDML--GRVGK 356
++ A G ++ + ++ D Y + DML GR+ K
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDK 607
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 129/287 (44%), Gaps = 20/287 (6%)
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE----RDTVSWNSMIAGYAQN 186
E + LGV N + N MI+ R LSFA + KM + V+ NS++ G+
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
A+ L +M+ +PD +T ++ S + V + + ++
Sbjct: 149 NRISEAVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMAT----RDLVSYNTLISGLASHGHGIECIKLISKMK 302
Y ++I + G + A + +M D+V Y+T+I L + H + + L ++M
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESI---KV-PDVDHYACMIDMLGRVGKLE 358
GI PD TY +++ + G + ++ + K+ P+V + +ID + GKL
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 359 EAMKLIHSM---PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTV 402
EA KL M ++P+ Y SL+N +H +++ A ++FT+
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD----EAQQIFTL 370
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 192/402 (47%), Gaps = 27/402 (6%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP ++VT ++++ GY + A D+M E +++ ++ G A E
Sbjct: 77 EP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M+ G +P+ T+ V++ GD LA +++ K++ K ++ + ++D
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
K ++ A +F ++ G+ N V+ +++IS G S A L + M E+ +
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLGIWA 231
V++N++I + + G+ + A KL +MI + PD T S+ + C H L
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRS-IDPDIFTYNSLINGFCMH-DRLDKAKQM 312
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLAS 287
+ + YN+LI + + +E+ T +F+EM+ R D V+Y TLI GL
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDH 343
G K+ +M DG+ PD +TY +L + G LE+ +VF+ ++ D+
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 344 YACMIDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNA 382
Y MI+ + + GK+++ L S+ + +P+ Y ++++
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 160/364 (43%), Gaps = 51/364 (14%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVR 61
Q N+VT+ +V G K G++ A +KM E VV +N ++ + + +
Sbjct: 147 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALN 206
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M + G P+ T+ ++IS S G A ++ + + K + N AL+D
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 122 KCGNLKAAQEIFD-------------------------------QLGVYRNSVSC----- 145
K G A+++ D Q+ + S C
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLD 326
Query: 146 --NAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEM 199
N +I + + + +LF +M R DTV++ ++I G +G+ A K+FK+M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
+S + PD +T + + G L + + + +IKL I Y ++I + G
Sbjct: 387 VS-DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Query: 260 MEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+++ +F ++ + ++V+YNT+ISGL S E L+ KMKEDG PD TY
Sbjct: 446 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNT 505
Query: 316 ILTA 319
++ A
Sbjct: 506 LIRA 509
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 190/399 (47%), Gaps = 24/399 (6%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP ++VT ++++ GY S + A D+M E ++ ++ G A E
Sbjct: 150 EP--DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M+ G +PD T+ TV++ GD LA +++ K++ + +N + ++D
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
K +++ A ++F ++ G+ N V+ N++I+ G S A L + M E+ +
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPN 327
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLGIWA 231
V++N++I + + G+ + A KL +EMI + PD +T + + C H L
Sbjct: 328 VVTFNALIDAFFKEGKLVEAEKLHEEMIQRS-IDPDTITYNLLINGFCMH-NRLDEAKQM 385
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLAS 287
+ +I YN+LI + +C +E+ +F+EM+ R L V+Y T+I G
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDH---- 343
G + +M + + D +TY +L G L+ +F+ ++ +++
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 344 YACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLNA 382
Y MI+ + + GK+ EA L S+ ++P Y ++++
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 181/404 (44%), Gaps = 54/404 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVR 61
Q ++VT+ T+V G K G++ A +KM + +VV +N ++ + V
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M + G P+ T+ ++I+ + G A ++ + + K + N AL+D
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERD------ 172
K G L A+++ +++ + ++++ N +I+ + L A+ +F M +D
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 173 ---------------------------------TVSWNSMIAGYAQNGESLMAIKLFKEM 199
TV++ ++I G+ Q G+ A +FK+M
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
+S N D +T + G L + L + +++L+I YN++I + G
Sbjct: 460 VS-NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 260 MEEATLIFQEMATR-DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILT 318
+ EA +F ++ + D+V+YNT+ISGL S E L KMKEDG P+ TY ++
Sbjct: 519 VGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIR 578
Query: 319 A----CSHAGLLEEGQKVFESIKVPDVDHYACMIDML--GRVGK 356
A C A E +++ S V D + + +ML GR+ K
Sbjct: 579 ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDK 622
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 189/402 (47%), Gaps = 27/402 (6%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP ++VT ++++ GY + A D+M E +++ ++ G A E
Sbjct: 152 EP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M+ G +P+ T+ V++ GD LA +++ K++ K +N + + ++D
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
K + A +F ++ GV N ++ +++IS S A L + M ER +
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLGIWA 231
V++N++I + + G+ + A KL+ EMI + PD T S+ + C H L
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMH-DRLDEAKHM 387
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV----SYNTLISGLAS 287
++ +++ YN+LI + + ++E +F+EM+ R LV +Y TLI G
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDH 343
+ +M DG+ P+ +TY +L G LE+ VFE ++ P +
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 344 YACMIDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNA 382
Y MI+ + + GK+E+ L S+ + +P IY ++++
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 155/354 (43%), Gaps = 51/354 (14%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVR 61
Q N+VT+ +V G K G++ A +KM E +VV ++ ++ + + +
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALN 281
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M + G P+ T+ ++IS + A ++ + + K + N AL+D
Sbjct: 282 LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFV 341
Query: 122 KCGNLKAAQEIFDQL--------------------------------------GVYRNSV 143
K G L A++++D++ + N V
Sbjct: 342 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 401
Query: 144 SCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEM 199
+ N +I+ + + + +LF +M +R +TV++ ++I G+ Q + A +FK+M
Sbjct: 402 TYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 461
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
+S + P+ +T ++ G L + L +++ +I YN +I + G
Sbjct: 462 VS-DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 260 MEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
+E+ +F ++ + D++ YNT+ISG G E L KM+EDG PD
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 171/356 (48%), Gaps = 23/356 (6%)
Query: 58 ETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALL 117
+ + LF M+ S P + ++S+ + + L S+ K+ ++ N + L+
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 118 DMHAKCGNLKAAQEIFDQ---LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER--- 171
+ + + A + + LG + V+ +++++ Y +S A L ++M E
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 172 -DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
DT+++ ++I G + ++ A+ L M+ +P+ +T V + G + L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFN 246
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLA 286
++ + +I+ +++ Y+++I + ++A +F EM + ++++Y++LIS L
Sbjct: 247 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 306
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVF-ESIKV---PDVD 342
++ + +L+S M E I P+ +T+ ++ A G L E +K++ E IK PD+
Sbjct: 307 NYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 366
Query: 343 HYACMIDMLGRVGKLEEA---MKLIHSMPMEPHAGIYGSLLN----ATRIHKQVEL 391
Y+ +I+ +L+EA +L+ S P+ Y +L+N A RI + VEL
Sbjct: 367 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVEL 422
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 181/401 (45%), Gaps = 33/401 (8%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLFN 64
+VT+ T++ Y K G K A D M + V ++N ++ +S + L
Sbjct: 268 IVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLR 327
Query: 65 DMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCG 124
DM P+E T+ T+I+ S+ G +A ++ ++ N+ AL+D H G
Sbjct: 328 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEG 387
Query: 125 NLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDT----VSWN 177
N K A ++F + G+ + VS ++ + + AR + +M +++
Sbjct: 388 NFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 178 SMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE 237
MI G +NG A+ L EM S + PD +T ++ + +G V +
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI-- 504
Query: 238 YQIKLSILG--YNSLIFMYSRCGSMEEATLIFQEMA----TRDLVSYNTLISGLASHGHG 291
Y++ LS G Y++LI+ R G ++EA I++ M TRD ++N L++ L G
Sbjct: 505 YRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKV 564
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVF----ESIKV---PDVDHY 344
E + + M DGI P+ +++ ++ ++G EG K F E KV P Y
Sbjct: 565 AEAEEFMRCMTSDGILPNTVSFDCLINGYGNSG---EGLKAFSVFDEMTKVGHHPTFFTY 621
Query: 345 ACMIDMLGRVGKLEEA---MKLIHSMPMEPHAGIYGSLLNA 382
++ L + G L EA +K +H++P +Y +LL A
Sbjct: 622 GSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTA 662
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 178/403 (44%), Gaps = 24/403 (5%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVRLFND 65
V++ ++ G K+ AR ++ +M V +++ M+ G ++G E V L N+
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M G +PD T+ +I+ +G A+ IV ++ +V N + + L+ + G
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528
Query: 126 LKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNS 178
LK A I++ + G R+ + N ++++ + G ++ A + M +TVS++
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+I GY +GE L A +F EM P T S+ G L + L+
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVG-HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 647
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIEC 294
+ + YN+L+ + G++ +A +F EM R D +Y +LISGL G +
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Query: 295 IKLISKMKEDG-IEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMID 349
I + + G + P+++ Y + AG + G E + PD+ MID
Sbjct: 708 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 350 MLGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNATRIHKQV 389
R+GK+E+ L+ M + P+ Y LL+ K V
Sbjct: 768 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDV 810
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 170/390 (43%), Gaps = 54/390 (13%)
Query: 8 NVVTWTTMVTGYAKSGNLKTA-----RIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
++VT++ ++ G+ K G KTA RIY + ++ ++ ++ + G E +R+
Sbjct: 477 DIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII-YSTLIYNCCRMGCLKEAIRI 535
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVR----------------------- 99
+ M+ G+ D T+ +++S G AE +R
Sbjct: 536 YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGN 595
Query: 100 ------------KLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYR---NSVS 144
++ KV H +F +LL K G+L+ A++ L ++V
Sbjct: 596 SGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVM 655
Query: 145 CNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMI 200
N +++A + G+L+ A LF +M +R D+ ++ S+I+G + G++++AI KE
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 201 STNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSM 260
+ + P+++ G GI+ ++ I+ N++I YSR G +
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 261 EEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGI 316
E+ + EM + +L +YN L+ G + L + +GI PD++T +
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 317 LTACSHAGLLEEGQKVFESI--KVPDVDHY 344
+ + +LE G K+ ++ + +VD Y
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRY 865
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 163/351 (46%), Gaps = 20/351 (5%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIV 98
SV + NA+L +SG + +ML PD T+ +I+ + G + ++
Sbjct: 197 SVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM 256
Query: 99 RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARL 155
+K++K + +L + K G KAA E+ D + GV + + N +I R
Sbjct: 257 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS 316
Query: 156 GDLS----FARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
++ RD+ +M + V++N++I G++ G+ L+A +L EM+S S P+ +T
Sbjct: 317 NRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS-PNHVT 375
Query: 212 MVSVFSACGHL--GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQE 269
++ GH+ G+ + ++ + S + Y L+ + + A +
Sbjct: 376 FNALID--GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 433
Query: 270 MATRDL----VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGL 325
M + ++Y +I GL +G E + L+++M +DGI+PD +TY ++ G
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 326 LEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPH 372
+ +++ I P+ Y+ +I R+G L+EA+++ +M +E H
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 166/397 (41%), Gaps = 59/397 (14%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
+ V + T++T KSGNL A F +M +RS++
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL-------------------------- 685
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLD-KVKFHSNYFVKTALLDMHAKCGNL 126
PD T+ ++IS G +A ++ + + N + T +D K G
Sbjct: 686 -----PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQW 740
Query: 127 KAA---QEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSM 179
KA +E D LG + V+ NAMI Y+R+G + DL +M + + ++N +
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQ 239
+ GY++ + + L++ +I N PD+LT S+ L +G+ +
Sbjct: 801 LHGYSKRKDVSTSFLLYRSII-LNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 859
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEMA-------TRDLVSYNTLISGLASHGHGI 292
+++ +N LI S+C + E F + + D + + ++S L +
Sbjct: 860 VEVDRYTFNMLI---SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 916
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFE-----SIKVPDVDHYACM 347
E ++ +M + GI P+ YIG++ G ++ V E I P+V A M
Sbjct: 917 ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESA-M 975
Query: 348 IDMLGRVGKLEEA---MKLIHSMPMEPHAGIYGSLLN 381
+ L + GK +EA ++ + M + P + +L++
Sbjct: 976 VRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMH 1012
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 155/338 (45%), Gaps = 42/338 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER-------SVVSWNAMLSGYAQSGAALETV 60
++VT M+ GY++ G ++ D +PE ++ ++N +L GY++ +
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTN---DLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 61 RLFNDMLSSGNEPDETTWVT-VISSCSS----LGDPCLAESIVRKLDKVKFHSNYFVKTA 115
L+ ++ +G PD+ T + V+ C S +G L I R ++ ++ N +
Sbjct: 815 LLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI--- 871
Query: 116 LLDMHAKC---GNLKAAQE---IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMP 169
+KC G + A + + LG+ + +C+AM+S R +R + ++M
Sbjct: 872 -----SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926
Query: 170 ER----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPD--ELTMVSVFSACGHLG 223
++ ++ + +I G + G+ A + +EMI+ P+ E MV + CG
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 224 SLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMAT----RDLVSYN 279
+L + + + ++ +I + +L+ + + G++ EA + M+ DLVSYN
Sbjct: 987 EATL---LLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYN 1043
Query: 280 TLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGIL 317
LI+GL + G +L +MK DG + TY ++
Sbjct: 1044 VLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 121/269 (44%), Gaps = 16/269 (5%)
Query: 107 HSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVS---CNAMISAYARLGD----LS 159
+SN V L+ ++ + G ++ + EIF +G+Y + S CNA++ + + G+ S
Sbjct: 160 NSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219
Query: 160 FARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSAC 219
F +++ + D ++N +I G + L ++M + P +T +V
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM-EKSGYAPTIVTYNTVLHWY 278
Query: 220 GHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL---- 275
G I + + + + YN LI R + + L+ ++M R +
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 276 VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFES 335
V+YNTLI+G ++ G + +L+++M G+ P+ +T+ ++ G +E K+F
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYM 398
Query: 336 IK----VPDVDHYACMIDMLGRVGKLEEA 360
++ P Y ++D L + + + A
Sbjct: 399 MEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 191/402 (47%), Gaps = 27/402 (6%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP ++VT ++++ GY S + A D+M E ++ ++ G A E
Sbjct: 150 EP--DIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M+ G +PD T+ TV++ GD LA S+++K++K K ++ + ++D
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 120 HAKCGNLKAAQEIF---DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
K ++ A +F D G+ + + +++IS G S A L + M ER +
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLGIWA 231
V+++++I + + G+ + A KL+ EMI + PD T S+ + C H L
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMH-DRLDEAKHM 385
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLAS 287
++ +++ Y++LI + + +EE +F+EM+ R L V+Y TLI G
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDH 343
+ +M G+ P+ +TY +L G L + VFE ++ PD+
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 344 YACMIDMLGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNA 382
Y MI+ + + GK+E+ +L ++ ++ P+ Y ++++
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 167/382 (43%), Gaps = 51/382 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVR 61
Q ++VT+ T+V G K G++ A KM E VV +N ++ G + + +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M + G PD T+ ++IS + G A ++ + + K + N +AL+D
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 122 KCGNLKAAQEIFDQL--------------------------------------GVYRNSV 143
K G L A++++D++ + N V
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 144 SCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEM 199
+ + +I + + + +LF +M +R +TV++ ++I G+ Q + A +FK+M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
+S P+ LT + G L+ + L ++ I YN +I + G
Sbjct: 460 VSVG-VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 260 MEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+E+ +F ++ + ++++YNT+ISG G E L+ KMKEDG P+ TY
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 316 ILTACSHAGLLEEGQKVFESIK 337
++ A G E ++ + ++
Sbjct: 579 LIRARLRDGDREASAELIKEMR 600
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 44/415 (10%)
Query: 6 QRNVVTWTTMV---------------TGYAKSGNLKTARIYFDKMPERS----VVSWNAM 46
Q +VVT+ T++ GY A FD+M E V+++N +
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 47 LSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKF 106
++G G LE L N M+ G D T+ T+++ +GD A +++ K+++
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 107 HSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARD 163
+ + +A++D K G+ AQ +F ++ G+ N + N MI + G S A+
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 164 LFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVS-VFSA 218
L M ER D +++N++I+ + G+ A KL EM+ PD +T S ++
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMIYGF 411
Query: 219 CGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV-- 276
C H + + ++ +N++I +Y R ++E + +E++ R LV
Sbjct: 412 CKH-----NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 277 --SYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFE 334
+YNTLI G + L +M G+ PD IT +L LEE ++FE
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 335 SIKVPDVD----HYACMIDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNA 382
I++ +D Y +I + + K++EA L S+P+ EP Y +++
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 165/376 (43%), Gaps = 47/376 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
+VVT+ T+V G K G+ K+A KM E VV ++A++ + G + LF
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
++ML G P+ T+ +I S G A+ ++R + + + + + AL+ K
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
G L A+++ D++ ++ ++V+ N+MI + + A+ +F+ M D V++N++I
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 181 AGYAQ-----NGESLM------------------------------AIKLFKEMISTNDS 205
Y + G L+ A LF+EMIS +
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS-HGV 498
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
PD +T + L + ++ +I L + YN +I + ++EA
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 266 IFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS 321
+F + D+ +YN +ISG + L KMK++G EPD TY ++ C
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 322 HAGLLEEGQKVFESIK 337
AG +++ ++ ++
Sbjct: 619 KAGEIDKSIELISEMR 634
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 151/325 (46%), Gaps = 30/325 (9%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
NV T+ M+ G+ G A+ M ER V+++NA++S + G E +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 64 NDMLSSGNEPDETTWVTVISS-C--SSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
++ML PD T+ ++I C + D ++ D V F++ ++D++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT-------IIDVY 442
Query: 121 AKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DT 173
+ + ++ ++ G+ N+ + N +I + + +L+ A+DLF +M DT
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTM-VSVFSACGHLGSLSLGIWAV 232
++ N ++ G+ +N + A++LF E+I + D + + + C GS W +
Sbjct: 503 ITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCK--GSKVDEAWDL 559
Query: 233 SI-LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLAS 287
L + ++ + YN +I + ++ +A ++F +M D +YNTLI G
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 288 HGHGIECIKLISKMKEDGIEPDRIT 312
G + I+LIS+M+ +G D T
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFT 644
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 155/321 (48%), Gaps = 16/321 (4%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVRLF 63
NVV + T++ G K+ +L A F M ++ + V++N ++SG + SG + RL
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
DM+ +P+ + +I + G+ A ++ +++ + N F +L++
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
G L A+ +FD + G + + V+ N +I+ + + + LF +M + D ++
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N++I GY Q G+ +A K+F M+ S PD +T + + G + + V L
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVS-PDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ ++ + I+ YN +I R ++EA +F+ + + D ++Y T+ISGL G
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 293 ECIKLISKMKEDGIEPDRITY 313
E KL +MKEDG P Y
Sbjct: 482 EADKLCRRMKEDGFMPSERIY 502
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 16/345 (4%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPE----RSVVSWNAMLSGYAQSGAALETVRLF 63
++VT +++ G+ + + A D M +VV +N +++G ++ + +F
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M G D T+ T+IS S+ G A ++R + K K N TAL+D K
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
GNL A+ ++ ++ V N + N++I+ + G L A+ +F+ M + D V++
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N++I G+ ++ +KLF EM + D T ++ G L++ + +
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ + I+ YN L+ G +E+A ++ +++ D+++YN +I GL
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
E L + G++PD I YI +++ GL E K+ +K
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 180/405 (44%), Gaps = 25/405 (6%)
Query: 1 MMGEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPE----RSVVSWNAMLSGYAQSGAA 56
+ P ++V +T ++T AK + KM + S+ ++ + +
Sbjct: 71 LQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRL 130
Query: 57 LETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTAL 116
+ L M+ G P T ++++ A S+V +D F N + +
Sbjct: 131 SLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTV 190
Query: 117 LDMHAKCGNLKAAQEIF---DQLGVYRNSVSCNAMISAYARLGDLSFA----RDLFNKMP 169
++ K +L A E+F ++ G+ ++V+ N +IS + G + A RD+ +
Sbjct: 191 INGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKI 250
Query: 170 ERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLG 228
+ + + + ++I + + G L A L+KEMI + P+ T S+ + C H G L
Sbjct: 251 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS-VVPNVFTYNSLINGFCIH-GCLGDA 308
Query: 229 IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV----SYNTLISG 284
+ ++ ++ YN+LI + + +E+ +F EM + LV +YNTLI G
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 285 LASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVD-- 342
G K+ ++M + G+ PD +TY +L + G +E+ + E ++ ++D
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428
Query: 343 --HYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNA 382
Y +I L R KL+EA L S+ ++P A Y ++++
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 186/415 (44%), Gaps = 44/415 (10%)
Query: 6 QRNVVTWTTMV---------------TGYAKSGNLKTARIYFDKMPERS----VVSWNAM 46
Q +VVT+ T++ GY A FD+M E V+++N +
Sbjct: 173 QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTL 232
Query: 47 LSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKF 106
++G G LE L N M+ G D T+ T+++ +GD A +++ K+++
Sbjct: 233 INGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHI 292
Query: 107 HSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARD 163
+ + +A++D K G+ AQ +F ++ G+ N + N MI + G S A+
Sbjct: 293 KPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQR 352
Query: 164 LFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVS-VFSA 218
L M ER D +++N++I+ + G+ A KL EM+ PD +T S ++
Sbjct: 353 LLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-IFPDTVTYNSMIYGF 411
Query: 219 CGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV-- 276
C H + + ++ +N++I +Y R ++E + +E++ R LV
Sbjct: 412 CKH-----NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 277 --SYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFE 334
+YNTLI G + L +M G+ PD IT +L LEE ++FE
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 335 SIKVPDVD----HYACMIDMLGRVGKLEEAMKLIHSMPM---EPHAGIYGSLLNA 382
I++ +D Y +I + + K++EA L S+P+ EP Y +++
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 169/377 (44%), Gaps = 49/377 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
+VVT+ T+V G K G+ K+A KM E VV ++A++ + G + LF
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
++ML G P+ T+ +I S G A+ ++R + + + + + AL+ K
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMI 180
G L A+++ D++ ++ ++V+ N+MI + + A+ +F+ M D V++N++I
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 181 AGYAQ-----NGESLM------------------------------AIKLFKEMISTNDS 205
Y + G L+ A LF+EMIS +
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS-HGV 498
Query: 206 KPDELTM-VSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEAT 264
PD +T + ++ C + L + ++ +I L + YN +I + ++EA
Sbjct: 499 CPDTITCNILLYGFCEN-EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 265 LIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTAC 320
+F + D+ +YN +ISG + L KMK++G EPD TY ++ C
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 321 SHAGLLEEGQKVFESIK 337
AG +++ ++ ++
Sbjct: 618 LKAGEIDKSIELISEMR 634
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 151/325 (46%), Gaps = 30/325 (9%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
NV T+ M+ G+ G A+ M ER V+++NA++S + G E +L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 64 NDMLSSGNEPDETTWVTVISS-C--SSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
++ML PD T+ ++I C + D ++ D V F++ ++D++
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT-------IIDVY 442
Query: 121 AKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DT 173
+ + ++ ++ G+ N+ + N +I + + +L+ A+DLF +M DT
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTM-VSVFSACGHLGSLSLGIWAV 232
++ N ++ G+ +N + A++LF E+I + D + + + C GS W +
Sbjct: 503 ITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCK--GSKVDEAWDL 559
Query: 233 SI-LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLAS 287
L + ++ + YN +I + ++ +A ++F +M D +YNTLI G
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 288 HGHGIECIKLISKMKEDGIEPDRIT 312
G + I+LIS+M+ +G D T
Sbjct: 620 AGEIDKSIELISEMRSNGFSGDAFT 644
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/420 (24%), Positives = 183/420 (43%), Gaps = 67/420 (15%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVV----SWNAMLSGYAQSGAALETVRLF 63
N +T+TT++ Y K+G A F M E V ++NA+LS + + E +++
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
DM S+G P+ TW T+++ C + G + R++ F + L+ + +C
Sbjct: 445 CDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRC 504
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
G+ A +++ ++ G + NA+++A AR GD ++ + M + S+
Sbjct: 505 GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY 564
Query: 177 NSMIAGYAQNGESL--------------------------------------MAIKLFKE 198
+ M+ YA+ G L A LFK+
Sbjct: 565 SLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKK 624
Query: 199 MISTNDSKPDEL---TMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYS 255
+ KPD + +M+S+F+ ++ + GI + + E + ++ YNSL+ MY
Sbjct: 625 ----HGYKPDMVIFNSMLSIFTR-NNMYDQAEGI--LESIREDGLSPDLVTYNSLMDMYV 677
Query: 256 RCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
R G +A I + + DLVSYNT+I G G E ++++S+M E GI P
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 312 TYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
TY ++ + G+ E + V E + P+ + ++D R GK EAM + +
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 189/456 (41%), Gaps = 103/456 (22%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKM----PERSVVSWNAMLSGYAQSGAALETVR-L 62
+V +TT++ Y+++G + A F++M P ++V++N +L + + G + + +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
++M S G + DE T TV+S+C A+
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSAC-----------------------------------AR 293
Query: 123 CGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVS 175
G L+ A+E F +L G +V+ NA++ + + G + A + +M E D+V+
Sbjct: 294 EGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVT 353
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL 235
+N ++A Y + G S A + EM++ P+ +T +V A
Sbjct: 354 YNELVAAYVRAGFSKEAAGVI-EMMTKKGVMPNAITYTTVIDA----------------- 395
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV----SYNTLISGLASHGHG 291
Y + G +EA +F M V +YN ++S L
Sbjct: 396 ------------------YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACM 347
E IK++ MK +G P+R T+ +L C + G+ + +VF +K PD D + +
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 348 IDMLGRVGKLEEAMKLIHSMPMEPHAGI------YGSLLNATRIHKQVELGE--LAAAKL 399
I GR G +A K+ M AG Y +LLNA GE ++ K
Sbjct: 498 ISAYGRCGSEVDASKMYGEM---TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 400 FTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRK 435
+P +S Y L+ YA G + + + N +++
Sbjct: 555 KGFKPTETS-YSLMLQCYAKGGNYLGIERIENRIKE 589
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 133/303 (43%), Gaps = 29/303 (9%)
Query: 78 WVTVISSCSSLG-DPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL 136
W+ + S+ +L D + E VR L + S Y V LLD QE +
Sbjct: 161 WLVLSSNSGALKLDHQVIEIFVRILGR---ESQYSVAAKLLDKIP-------LQEYLLDV 210
Query: 137 GVYRNSVSCNAMISAYARLGDLSFARDLFNKM----PERDTVSWNSMIAGYAQNGESLMA 192
Y ++ AY+R G A DLF +M P V++N ++ + + G S
Sbjct: 211 RAY------TTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRK 264
Query: 193 IKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIF 252
I + + + K DE T +V SAC G L + L + + YN+L+
Sbjct: 265 ILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQ 324
Query: 253 MYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEP 308
++ + G EA + +EM D V+YN L++ G E +I M + G+ P
Sbjct: 325 VFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMP 384
Query: 309 DRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLI 364
+ ITY ++ A AG +E K+F S+K VP+ Y ++ +LG+ + E +K++
Sbjct: 385 NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Query: 365 HSM 367
M
Sbjct: 445 CDM 447
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 148/352 (42%), Gaps = 53/352 (15%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERS----VVSWNAMLSGYAQSGAALET 59
EP R+ T+ T+++ Y + G+ A + +M V ++NA+L+ A+ G
Sbjct: 488 EPDRD--TFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
+ +DM S G +P ET++ ++ + G+ E I ++ + + ++ + LL
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 120 HAKCGNLKAAQE---IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
+ KC L ++ +F + G + V N+M+S + R A + + E D
Sbjct: 606 NFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPD 665
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV 232
V++NS++ Y + GE A ++ K
Sbjct: 666 LVTYNSLMDMYVRRGECWKAEEILK----------------------------------- 690
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLASH 288
L + Q+K ++ YN++I + R G M+EA + EM R + +YNT +SG +
Sbjct: 691 -TLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM 749
Query: 289 GHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPD 340
G E +I M ++ P+ +T+ ++ AG E IK D
Sbjct: 750 GMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 192/424 (45%), Gaps = 57/424 (13%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP + VT++T++ G G + A D+M E ++++ NA+++G +G +
Sbjct: 139 EP--DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M+ +G +P+E T+ V+ G LA ++RK+++ K + + ++D
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLG----DLSFARDLFNKMPERD 172
K G+L A +F+++ G + + +I + G RD+ + D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVS------------------ 214
V+++++I + + G+ A +L KEMI S PD +T S
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGIS-PDTVTYTSLIDGFCKENQLDKANHML 375
Query: 215 ---VFSACG----HLGSLSLGIWAVSILN---EYQIKLSILG-------YNSLIFMYSRC 257
V CG L G ++++ E K+S+ G YN+LI +
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 258 GSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITY 313
G +E A +FQEM +R D+VSY L+ GL +G + +++ K+++ +E D Y
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIY 495
Query: 314 IGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
I+ +A +++ +F S+ + PDV Y MI L + G L EA L M
Sbjct: 496 NIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 370 EPHA 373
+ H+
Sbjct: 556 DGHS 559
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 166/370 (44%), Gaps = 22/370 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVRLF 63
+ V ++ ++ G K G+L A F++M + ++ + ++ G+ +G + +L
Sbjct: 246 DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLL 305
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
DM+ PD + +I G AE + +++ + + T+L+D K
Sbjct: 306 RDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKE 365
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
L A + D + G N + N +I+ Y + + +LF KM R DTV++
Sbjct: 366 NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTY 425
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N++I G+ + G+ +A +LF+EM+S +PD ++ + G + +
Sbjct: 426 NTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ +++L I YN +I +++A +F + + D+ +YN +I GL G
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMI 348
E L KM+EDG P+ TY ++ A G + K+ E IK D ++
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Query: 349 DML--GRVGK 356
DML GR+ K
Sbjct: 605 DMLSDGRLKK 614
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 177/386 (45%), Gaps = 22/386 (5%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP N +T++T++ G G + A D+M E +++ N +++G SG E
Sbjct: 155 EP--NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEA 212
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
+ L + M+ G +P+ T+ V++ G LA ++RK+++ + + ++D
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLG----DLSFARDLFNKMPERD 172
K G+L A +F+++ G+ N ++ N +I + G RD+ + +
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV 232
V+++ +I + + G+ A +L KEMI + PD +T S+ L V
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA-PDTITYTSLIDGFCKENHLDKANQMV 391
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASH 288
++ +I +N LI Y + +++ +F++M+ R D V+YNTLI G
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 289 GHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDHY 344
G +L +M + P+ +TY +L G E+ ++FE I+ D+ Y
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIY 511
Query: 345 ACMIDMLGRVGKLEEAMKLIHSMPME 370
+I + K+++A L S+P++
Sbjct: 512 NIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/376 (24%), Positives = 173/376 (46%), Gaps = 26/376 (6%)
Query: 6 QRNV----VTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAAL 57
+RN+ V ++ ++ G K G+L A F++M + +++++N ++ G+ +G
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 58 ETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALL 117
+ +L DM+ P+ T+ +I S G AE + +++ + T+L+
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLI 375
Query: 118 DMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER--- 171
D K +L A ++ D + G N + N +I+ Y + + +LF KM R
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 172 -DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
DTV++N++I G+ + G+ +A +LF+EM+S P+ +T + G +
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK-VPPNIVTYKILLDGLCDNGESEKALE 494
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV----SYNTLISGLA 286
+ + +++L I YN +I +++A +F + + + +YN +I GL
Sbjct: 495 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLC 554
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVD 342
G E L KM+EDG PD TY ++ A G + K+ E +K D
Sbjct: 555 KKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAS 614
Query: 343 HYACMIDML--GRVGK 356
+IDML GR+ K
Sbjct: 615 TIKMVIDMLSDGRLKK 630
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 17/225 (7%)
Query: 158 LSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEM----ISTNDSKPDELTMV 213
+ RD+ + P + ++ + + A+ + + + L K+M I+ N M+
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS--IMI 130
Query: 214 SVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA-- 271
+ F C L L A+ + + + + + +++LI G + EA + M
Sbjct: 131 NCFCRCR---KLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 272 --TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAG----L 325
DL++ NTL++GL G E + LI KM E G +P+ +TY +L +G
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 326 LEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME 370
+E +K+ E D Y+ +ID L + G L+ A L + M M+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 189/437 (43%), Gaps = 62/437 (14%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALET 59
EP ++VT +++ G+ + A +M E ++N ++ G + A E
Sbjct: 148 EP--DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEA 205
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M+ G +PD T+ V++ GD LA S+++K+++ K + ++D
Sbjct: 206 VALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 120 HAKCGNLKAAQEIF---DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
N+ A +F D G+ N V+ N++I G S A L + M ER +
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA-CGHLGSLSLGIWA 231
V+++++I + + G+ + A KL+ EMI + PD T S+ + C H L
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMH-DRLDEAKHM 383
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR------------------ 273
++ +++ YN+LI + + ++E +F+EM+ R
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 274 ---------------------DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
D+++Y+ L+ GL ++G + + ++ +EPD T
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 313 YIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
Y ++ AG +E+G +F S+ + P+V Y M+ R G EEA L M
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 369 ME---PHAGIYGSLLNA 382
E P +G Y +L+ A
Sbjct: 564 EEGPLPDSGTYNTLIRA 580
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 189/433 (43%), Gaps = 60/433 (13%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYA------------ 51
N+ T++ ++ + + L A KM E +V+ N++L+G+
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 52 -----------------------QSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSL 88
+ A E V L + M+ G +PD T+ V++
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 89 GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF---DQLGVYRNSVSC 145
GD LA S+++K+++ K + ++D N+ A +F D G+ N V+
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 146 NAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMIS 201
N++I G S A L + M ER + V+++++I + + G+ + A KL+ EMI
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 202 TNDSKPDELTMVSVFSA-CGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSM 260
+ PD T S+ + C H L ++ +++ YN+LI + + +
Sbjct: 355 RS-IDPDIFTYSSLINGFCMH-DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 261 EEATLIFQEMATRDL----VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGI 316
+E +F+EM+ R L V+Y TLI G + +M DG+ PD +TY +
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 317 LTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPM--- 369
L + G +E VFE ++ PD+ Y MI+ + + GK+E+ L S+ +
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 370 EPHAGIYGSLLNA 382
+P+ Y ++++
Sbjct: 533 KPNVVTYTTMMSG 545
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 168/353 (47%), Gaps = 19/353 (5%)
Query: 58 ETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALL 117
+ V LF DM+ S P + ++S+ + + L S+ ++ + N + + L+
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 118 DMHAKCGNLKAAQEIFDQ---LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER--- 171
+ + L A + + LG + V+ N++++ + +S A L +M E
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 172 -DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
D+ ++N++I G ++ + A+ L M+ +PD +T V + G + L +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLA 286
+ + + +I+ ++ YN++I ++ +A +F EM + ++V+YN+LI L
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVF-ESIKV---PDVD 342
++G + +L+S M E I P+ +T+ ++ A G L E +K++ E IK PD+
Sbjct: 303 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 343 HYACMIDMLGRVGKLEEA---MKLIHSMPMEPHAGIYGSLLNATRIHKQVELG 392
Y+ +I+ +L+EA +L+ S P+ Y +L+ K+V+ G
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 174/372 (46%), Gaps = 22/372 (5%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP ++VT +++ G+ + A D+M E V++ ++ G A E
Sbjct: 145 EP--DIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M+ G +PD T+ V++ GD LA +++ K++ K +N + + ++D
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDS 262
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
K + A +F ++ GV N ++ +++IS G S A L + M ER +
Sbjct: 263 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPN 322
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV 232
V+++++I + + G+ + A KL++EMI + P+ T S+ + L L +
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRS-IDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLASH 288
++ +++ YN+LI + + +++ +F+EM+ R L V+Y TLI G
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Query: 289 GHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHY 344
+ +M G+ P+ +TY +L G L + VFE ++ PD+ Y
Sbjct: 442 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
Query: 345 ACMIDMLGRVGK 356
MI+ + + GK
Sbjct: 502 NIMIEGMCKAGK 513
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 175/356 (49%), Gaps = 23/356 (6%)
Query: 58 ETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALL 117
+ + LF M S P + ++S+ + + L S K++ + N + L+
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 118 DMHAKCGNLKAAQEIFDQ---LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER--- 171
+ +C L A + + LG + V+ N++++ + +S A L ++M E
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 172 -DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
DTV++ ++I G + ++ A+ L M+ +PD +T +V + G L +
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG-CQPDLVTYGAVVNGLCKRGDTDLALN 239
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLA 286
++ + +I+ +++ Y+++I + ++A +F EM + ++++Y++LIS L
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFES-IKV---PDVD 342
++G + +L+S M E I P+ +T+ ++ A G L + +K++E IK P++
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 343 HYACMID---MLGRVGKLEEAMKLIHSMPMEPHAGIYGSLLN----ATRIHKQVEL 391
Y+ +I+ ML R+G+ ++ ++L+ P+ Y +L+N A R+ K +EL
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMEL 415
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 181/375 (48%), Gaps = 25/375 (6%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSS 69
+T+ ++ G K G + A+ F ++P+ +V +N ++ G+ G + + +DM++S
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382
Query: 70 -GNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKA 128
G PD T+ ++I G LA ++ + N + T L+D K G +
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 129 AQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIA 181
A + +++ G+ N+V N +ISA+ + + A ++F +MP + D ++NS+I+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 182 GYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIK 241
G + E A+ L ++MIS + +T ++ +A G + A ++NE +
Sbjct: 503 GLCEVDEIKHALWLLRDMISEG-VVANTVTYNTLINAFLRRGEIK---EARKLVNEMVFQ 558
Query: 242 ---LSILGYNSLIFMYSRCGSMEEATLIFQEMATRD-----LVSYNTLISGLASHGHGIE 293
L + YNSLI R G +++A +F++M RD +S N LI+GL G E
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKM-LRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 294 CIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMID 349
++ +M G PD +T+ ++ AG +E+G +F ++ PD + ++
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 350 MLGRVGKLEEAMKLI 364
L + G + +A L+
Sbjct: 678 WLCKGGFVYDACLLL 692
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 151/321 (47%), Gaps = 51/321 (15%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVRLF 63
NV ++T +V G+ K G + A ++M + + V +N ++S + + E V +F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+M G +PD T+ ++IS ++D++K H+ + ++ DM ++
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLC-------------EVDEIK-HALWLLR----DMISE- 523
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM----PERDTVSWNSM 179
GV N+V+ N +I+A+ R G++ AR L N+M D +++NS+
Sbjct: 524 -------------GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQ 239
I G + GE A LF++M+ + P ++ + + G + AV E
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHA-PSNISCNILINGLCRSGMVE---EAVEFQKEMV 626
Query: 240 IKLS---ILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
++ S I+ +NSLI R G +E+ +F+++ D V++NTL+S L G
Sbjct: 627 LRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVY 686
Query: 293 ECIKLISKMKEDGIEPDRITY 313
+ L+ + EDG P+ T+
Sbjct: 687 DACLLLDEGIEDGFVPNHRTW 707
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/377 (18%), Positives = 153/377 (40%), Gaps = 46/377 (12%)
Query: 37 ERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAES 96
E + S+N +L +F DMLS P T+ V+ + ++ + A S
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 97 IVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL-------------------- 136
++R + K N + L+ +KC + A ++ +++
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 137 ------------------GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNS 178
G + ++ +++ ++G + A+DLF ++P+ + V +N+
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+I G+ +G A + +M+++ PD T S+ G + L + + +
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLASHGHGIEC 294
K ++ Y L+ + + G ++EA + EM+ L V +N LIS E
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSHAGLLEEG----QKVFESIKVPDVDHYACMIDM 350
+++ +M G +PD T+ +++ ++ + + V + Y +I+
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 538
Query: 351 LGRVGKLEEAMKLIHSM 367
R G+++EA KL++ M
Sbjct: 539 FLRRGEIKEARKLVNEM 555
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/465 (20%), Positives = 210/465 (45%), Gaps = 31/465 (6%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFD------KMPERSVVSWNAMLSGYAQSGAALETVR 61
+++ TT++ G+ + G + A + +P+ V+++N M+SGY ++G +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD--VITYNVMISGYCKAGEINNALS 193
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
+ + M S PD T+ T++ S G A ++ ++ + + + T L++
Sbjct: 194 VLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERDTV 174
+ + A ++ D++ G + V+ N +++ + G L A N MP + + +
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 175 SWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI 234
+ N ++ G + A KL +M+ S P +T + + G L I +
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFS-PSVVTFNILINFLCRKGLLGRAIDILEK 369
Query: 235 LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGH 290
+ ++ + + L YN L+ + + M+ A + M +R D+V+YNT+++ L G
Sbjct: 370 MPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
Query: 291 GIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYAC 346
+ +++++++ G P ITY ++ + AG + K+ + ++ PD Y+
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 347 MIDMLGRVGKLEEAMKLIHS---MPMEPHAGIYGSLLNATRIHKQVELG-ELAAAKLFTV 402
++ L R GK++EA+K H M + P+A + S++ +Q + + +
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRG 549
Query: 403 EPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVKKITAWSWV 447
N ++Y +L A G KE + N + +G+ K ++ V
Sbjct: 550 CKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 93/160 (58%), Gaps = 5/160 (3%)
Query: 250 LIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPD 309
L+ MYS CG EA +F++M+ ++L ++ +I A +G G + I + S+ KE+G PD
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 310 RITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLI 364
+ GI AC G ++EG FES+ P ++ Y +++M G L+EA++ +
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 365 HSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEP 404
MPMEP+ ++ +L+N +R+H +ELG+ A + ++P
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 98/216 (45%), Gaps = 18/216 (8%)
Query: 109 NYFVK-TALLDMHAKCGNLKAAQEIFDQLGVYRNSVS------CNAMISAYARLGDLSFA 161
NY V + LL + CG + QE G SVS + ++ Y+ G + A
Sbjct: 249 NYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEA 308
Query: 162 RDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGH 221
+F KM E++ +W +I +A+NG AI +F + PD +F ACG
Sbjct: 309 ASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSR-FKEEGNIPDGQLFRGIFYACGM 367
Query: 222 LGSLSLGIWAV-SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS-YN 279
LG + G+ S+ +Y I SI Y SL+ MY+ G ++EA + M V +
Sbjct: 368 LGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWE 427
Query: 280 TLISGLASHGH---GIECIKLISKMKEDGIEPDRIT 312
TL++ HG+ G C +++ + ++P R+
Sbjct: 428 TLMNLSRVHGNLELGDYCAEVV-----EFLDPTRLN 458
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 171/390 (43%), Gaps = 44/390 (11%)
Query: 8 NVVTWTTMVTGYAKSGN----LKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLF 63
VVT+ ++ Y K G L+ +R+ ++ + ++ +++ M++G+ + +F
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
DM+ G +PD + +IS+ +G+ A V+++ K++ ++ +AK
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 124 GNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGY 183
G+++ + E+FD + C + + + ++N +I G
Sbjct: 603 GDMRRSLEVFDMMR------RCGCVPTVH----------------------TFNGLINGL 634
Query: 184 AQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLS 243
+ + A+++ EM S +E T + +G + L + +
Sbjct: 635 VEKRQMEKAVEILDEMTLAGVS-ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD 693
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS----YNTLISGLASHGHGIECIKLIS 299
I Y +L+ + G M+ A + +EM+ R++ YN LI G A G E LI
Sbjct: 694 IFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQ 753
Query: 300 KMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVG 355
+MK++G++PD TY ++ACS AG + + E ++ P++ Y +I R
Sbjct: 754 QMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARAS 813
Query: 356 KLEEAMKL---IHSMPMEPHAGIYGSLLNA 382
E+A+ + +M ++P +Y LL +
Sbjct: 814 LPEKALSCYEEMKAMGIKPDKAVYHCLLTS 843
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/447 (19%), Positives = 193/447 (43%), Gaps = 51/447 (11%)
Query: 12 WTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLFNDML 67
+T+++ YA ++ A KM E S+V+++ ++ G++++G A F++
Sbjct: 347 YTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAK 406
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ + + +I + + AE++VR++++ + + ++D + + K
Sbjct: 407 RIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEK 466
Query: 128 AAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSMI 180
+F +L G V+ +I+ Y ++G +S A ++ M E + +++ MI
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 181 AGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQI 240
G+ + + A +F++M+ KPD + ++ SA +G++ I V + + +
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEG-MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV----SYNTLISGLASHGHGIECIK 296
+ + + +I Y++ G M + +F M V ++N LI+GL + ++
Sbjct: 586 RPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVE 645
Query: 297 LISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP--DVD--HYACMIDMLG 352
++ +M G+ + TY I+ + G + + F ++ DVD Y ++
Sbjct: 646 ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACC 705
Query: 353 RVGKLEEAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVL 412
+ G+++ A+ + M +A I P NS Y +
Sbjct: 706 KSGRMQSALAVTKEM-------------SARNI------------------PRNSFVYNI 734
Query: 413 LSNIYALAGRWKEVGNVRNIMRKQGVK 439
L + +A G E ++ M+K+GVK
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVK 761
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 164/369 (44%), Gaps = 19/369 (5%)
Query: 32 FDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDP 91
F+K+ + S + M+ Y + G F M + G P + ++I + + D
Sbjct: 301 FEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDM 360
Query: 92 CLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRNSVSCN---AM 148
A S VRK+ + + + ++ +K G+ +AA FD+ +++ + +
Sbjct: 361 DEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKI 420
Query: 149 ISAYARLGDLSFARDLFNKMPERDTVS----WNSMIAGYAQNGESLMAIKLFKEMISTND 204
I A+ + ++ A L +M E + +++M+ GY + + +FK +
Sbjct: 421 IYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGF 480
Query: 205 SKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEAT 264
+ P +T + + +G +S + ++ E +K ++ Y+ +I + + A
Sbjct: 481 T-PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 265 LIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTAC 320
+F++M D++ YN +IS G+ I+ + +M++ P T++ I+
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 321 SHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIY 376
+ +G + +VF+ ++ VP V + +I+ L ++E+A++++ M + AG+
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL---AGVS 656
Query: 377 GSLLNATRI 385
+ T+I
Sbjct: 657 ANEHTYTKI 665
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 20/215 (9%)
Query: 241 KLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS----YNTLISGLASHGHGIECIK 296
K S + ++ Y R G M A F+ M R + Y +LI A E +
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 297 LISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESI----KVPDVDHYACMIDMLG 352
+ KMKE+GIE +TY I+ S AG E F+ K + Y +I
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 353 RVGKLEEAMKLIHSMPME----PHAGIYGSLLNATRIHKQVELGELAAAKL----FTVEP 404
+ +E A L+ M E P A IY ++++ + + G + +L FT
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIA-IYHTMMDGYTMVADEKKGLVVFKRLKECGFTP-- 482
Query: 405 HNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVK 439
Y L N+Y G+ + V +M+++GVK
Sbjct: 483 -TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVK 516
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 177/376 (47%), Gaps = 20/376 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
NV T+ ++ G+ +GN+ A FDKM + +VV++N ++ GY + + +L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M G EP+ ++ VI+ G ++ ++++ + + L+ + K
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
GN A + ++ G+ + ++ ++I + + G+++ A + ++M R + ++
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
+++ G++Q G A ++ +EM + N P +T ++ + G + I + +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
E + ++ Y++++ + R ++EA + +EM + D ++Y++LI G
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEG----QKVFESIKVPDVDHYACMI 348
E L +M G+ PD TY ++ A G LE+ ++ E +PDV Y+ +I
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 349 DMLGRVGKLEEAMKLI 364
+ L + + EA +L+
Sbjct: 563 NGLNKQSRTREAKRLL 578
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 166/392 (42%), Gaps = 70/392 (17%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLFND 65
VT+ T++ GY K GN A + +M SV+++ +++ ++G + +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M G P+E T+ T++ S G A ++R+++ F + AL++ H G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 126 LKAAQEIFDQL---GVYRNSVSCNAMISAYARLGD----LSFARDLFNKMPERDTVSWNS 178
++ A + + + G+ + VS + ++S + R D L R++ K + DT++++S
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+I G+ + + A L++EM+ PDE T
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVG-LPPDEFT--------------------------- 522
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIEC 294
Y +LI Y G +E+A + EM + D+V+Y+ LI+GL E
Sbjct: 523 --------YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREA 574
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSH---------------AGLLEEGQKVFESI--- 336
+L+ K+ + P +TY ++ CS+ G++ E +VFES+
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK 634
Query: 337 -KVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
PD Y MI R G + +A L M
Sbjct: 635 NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 156/365 (42%), Gaps = 20/365 (5%)
Query: 93 LAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMI 149
AE++ +++ + + N F L+ GN+ A +FD++ G N V+ N +I
Sbjct: 188 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 150 SAYARLGDLSFARDLFNKMP----ERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
Y +L + L M E + +S+N +I G + G + EM +
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRGY 306
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
DE+T ++ G+ + + + + + S++ Y SLI + G+M A
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 266 IFQEMATRDLV----SYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS 321
+M R L +Y TL+ G + G+ E +++ +M ++G P +TY ++
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 322 HAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAG 374
G +E+ V E +K PDV Y+ ++ R ++EA+++ M ++P
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 375 IYGSLLNA-TRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIM 433
Y SL+ + E +L L P + Y L N Y + G ++ + N M
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 434 RKQGV 438
++GV
Sbjct: 547 VEKGV 551
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 171/379 (45%), Gaps = 40/379 (10%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
N T+TT+V G+++ G + A +M + SVV++NA+++G+ +G + + +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
DM G PD ++ TV+S D A + R++ + + ++L+ +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
K A ++++++ G+ + + A+I+AY GDL A L N+M E+ D V++
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
+ +I G + + A +L ++ +S P ++T ++ C ++ S+ VS++
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLF-YEESVPSDVTYHTLIENCSNIEFKSV----VSLIK 613
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ +K G M EA +F+ M + D +YN +I G G
Sbjct: 614 GFCMK----------------GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIR 657
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQK----VFESIKVPDVDHYACMI 348
+ L +M + G +T I ++ A G + E V S ++ + + ++
Sbjct: 658 KAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLV 717
Query: 349 DMLGRVGKLEEAMKLIHSM 367
++ R G ++ + ++ M
Sbjct: 718 EINHREGNMDVVLDVLAEM 736
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 125/264 (47%), Gaps = 17/264 (6%)
Query: 143 VSCNAMISAYARLG-DLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFK 197
+S NA++ A R ++SFA ++F +M E + ++N +I G+ G +A+ LF
Sbjct: 170 LSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFD 229
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRC 257
+M T P+ +T ++ L + G + + ++ +++ YN +I R
Sbjct: 230 KM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 258 GSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITY 313
G M+E + + EM R D V+YNTLI G G+ + + + ++M G+ P ITY
Sbjct: 289 GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITY 348
Query: 314 IGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMP- 368
++ + AG + + + ++V P+ Y ++D + G + EA +++ M
Sbjct: 349 TSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408
Query: 369 --MEPHAGIYGSLLNATRIHKQVE 390
P Y +L+N + ++E
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKME 432
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 195/436 (44%), Gaps = 60/436 (13%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP + +T++T+V G+ G + A D+M E +V+ + +++G G E
Sbjct: 137 EP--DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
+ L + M+ G +PDE T+ V++ G+ LA + RK+++ ++ + ++D
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVS--------CN---------------------- 146
K G+ A +F+++ G+ + V+ CN
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 147 -----AMISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFK 197
A+I + + G L A++L+N+M R DT+++NS+I G+ + A ++F
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 198 EMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRC 257
M+S +PD +T + ++ + G+ ++ + + + YN+L+ + +
Sbjct: 375 LMVSKG-CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 258 GSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITY 313
G + A +FQEM +R +V+Y L+ GL +G + +++ KM++ + Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 314 IGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPM 369
I+ +A +++ +F S+ PDV Y MI L + G L EA L M
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 370 E---PHAGIYGSLLNA 382
+ P Y L+ A
Sbjct: 554 DGCTPDDFTYNILIRA 569
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 176/400 (44%), Gaps = 55/400 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVR 61
Q + VT+ ++ KSGN A F KM ER SVV ++ ++ + G+ + +
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALS 266
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LFN+M G + D T+ ++I + G ++R++ + +AL+D+
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER------- 171
K G L A+E+++++ G+ ++++ N++I + + L A +F+ M +
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIV 386
Query: 172 --------------------------------DTVSWNSMIAGYAQNGESLMAIKLFKEM 199
+T+++N+++ G+ Q+G+ A +LF+EM
Sbjct: 387 TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM 446
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
+S P +T + G L+ + + + ++ L I YN +I
Sbjct: 447 VSRG-VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 260 MEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+++A +F ++ + D+V+YN +I GL G E L KMKEDG PD TY
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 316 ILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDML 351
++ A L ++ E +KV D +IDML
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 174/364 (47%), Gaps = 19/364 (5%)
Query: 37 ERSVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAES 96
E ++N ++ G G E V L + M+ +G +PD T+ ++++ GD LA
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 97 IVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYA 153
++RK+++ ++ F + ++D + G + AA +F ++ G+ + V+ N+++
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 154 RLGDLSFARDLFNKMPERDTV----SWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDE 209
+ G + L M R+ V ++N ++ + + G+ A +L+KEMI+ S P+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS-PNI 333
Query: 210 LTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQE 269
+T ++ LS + ++ + I+ + SLI Y +++ +F+
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 270 MATRDL----VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGL 325
++ R L V+Y+ L+ G G +L +M G+ PD +TY +L G
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 326 LEEGQKVFESIKVPDVD----HYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGS 378
LE+ ++FE ++ +D Y +I+ + + GK+E+A L S+P ++P+ Y
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 379 LLNA 382
+++
Sbjct: 514 MISG 517
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 171/400 (42%), Gaps = 55/400 (13%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVR 61
Q +VVT+ ++V G +SG+ A KM ER+V +++ ++ + G +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M + G + T+ +++ G +++ + + N LLD+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTV 174
K G L+ A E++ ++ G+ N ++ N ++ Y LS A ++ + M D V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 175 SWNSMIAGYA-----------------------------------QNGESLMAIKLFKEM 199
++ S+I GY Q+G+ +A +LF+EM
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 200 ISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGS 259
+S + PD +T + G L + L + ++ L I+ Y ++I + G
Sbjct: 430 VS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 260 MEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIG 315
+E+A +F + + ++++Y +ISGL G E L+ KM+EDG P+ TY
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 316 ILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDML 351
++ A G L K+ E +K D +IDML
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 163/377 (43%), Gaps = 58/377 (15%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIV 98
++ + N M++ + + + ++ G EPD TT+
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF-------------------- 161
Query: 99 RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARL 155
N +K L+ G + A + D++ G + V+ N++++ R
Sbjct: 162 ----------NTLIKGLFLE-----GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRS 206
Query: 156 GDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELT 211
GD S A DL KM ER D +++++I ++G AI LFKEM T K +T
Sbjct: 207 GDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-ETKGIKSSVVT 265
Query: 212 MVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA 271
S+ G + G + + +I +++ +N L+ ++ + G ++EA +++EM
Sbjct: 266 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 272 TR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLE 327
TR ++++YNTL+ G E ++ M + PD +T+ ++ ++
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 328 EGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLL 380
+G KVF +I V + Y+ ++ + GK++ A +L M + P YG LL
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 381 NAT----RIHKQVELGE 393
+ ++ K +E+ E
Sbjct: 446 DGLCDNGKLEKALEIFE 462
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 177/386 (45%), Gaps = 22/386 (5%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP + V + T++ G + A D+M E ++++ N +++G +G +
Sbjct: 155 EP--DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDA 212
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V L + M+ +G +P+E T+ V++ G LA ++RK+++ + + ++D
Sbjct: 213 VVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGD----LSFARDLFNKMPERD 172
K G+L A +F+++ G + ++ N +I + G RD+ + +
Sbjct: 273 LCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV 232
V+++ +I + + G+ A +L KEM+ + P+ +T S+ L I V
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA-PNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASH 288
++ I+ +N LI Y + +++ +F+EM+ R + V+YNTL+ G
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 289 GHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDHY 344
G KL +M + PD ++Y +L G LE+ ++F I+ D+ Y
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 345 ACMIDMLGRVGKLEEAMKLIHSMPME 370
+I + K+++A L S+P++
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLK 537
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 171/387 (44%), Gaps = 55/387 (14%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVR 61
Q N VT+ ++ KSG A KM ER++ V ++ ++ G + G+
Sbjct: 225 QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN 284
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LFN+M G + D T+ T+I + G ++R + K K N + L+D
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTV 174
K G L+ A ++ ++ G+ N+++ N++I + + L A + + M + D +
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 175 SWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI 234
++N +I GY + ++LF+EM SL G+ A ++
Sbjct: 405 TFNILINGYCKANRIDDGLELFREM------------------------SLR-GVIANTV 439
Query: 235 LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGH 290
YN+L+ + + G +E A +FQEM +R D+VSY L+ GL +G
Sbjct: 440 -----------TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGE 488
Query: 291 GIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDHYAC 346
+ +++ K+++ +E D Y+ I+ +A +++ +F S+ + D Y
Sbjct: 489 LEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNI 548
Query: 347 MIDMLGRVGKLEEAMKLIHSMPMEPHA 373
MI L R L +A L M E HA
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHA 575
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 180/382 (47%), Gaps = 33/382 (8%)
Query: 6 QRNV----VTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAAL 57
+RN+ V ++ ++ G K G+L A F++M + ++++N ++ G+ +G
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWD 315
Query: 58 ETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALL 117
+ +L DM+ P+ T+ +I S G A+ +++++ + N +L+
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 118 DMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER--- 171
D K L+ A ++ D + G + ++ N +I+ Y + + +LF +M R
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 172 -DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
+TV++N+++ G+ Q+G+ +A KLF+EM+S +PD ++ + G L +
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR-VRPDIVSYKILLDGLCDNGELEKALE 494
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLA 286
+ + +++L I Y +I +++A +F + + D +YN +IS L
Sbjct: 495 IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC 554
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITY-------IGILTACSHAGLLEEGQKVFESIKVP 339
+ L KM E+G PD +TY +G A + A L+EE +S P
Sbjct: 555 RKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE----MKSSGFP 610
Query: 340 -DVDHYACMIDMLGRVGKLEEA 360
DV +I+ML G+L+++
Sbjct: 611 ADVSTVKMVINMLSS-GELDKS 631
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 129/301 (42%), Gaps = 37/301 (12%)
Query: 162 RDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTN--DSKPDELTMVSVFSAC 219
RD+ P + +N + + A+ + + + L K+M S S M++ F C
Sbjct: 77 RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRC 136
Query: 220 GHLGSLSLGIWAVSILNEYQIKLSILGY--NSLIF------MYSRCGSMEEATLIFQ--E 269
L +A S + K+ LGY +++IF + C E L+ + E
Sbjct: 137 RKLS------YAFSTMG----KIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 270 MATR-DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAG---- 324
M + L++ NTL++GL +G + + LI +M E G +P+ +TY +L +G
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 325 LLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIHSMPME-------PHAGIYG 377
+E +K+ E D Y+ +ID L + G L+ A L + M ++ + + G
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 378 SLLNATRIHKQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQG 437
NA R +L + + P N + +L + + G+ +E + M ++G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKR--KISP-NVVTFSVLIDSFVKEGKLREADQLLKEMMQRG 363
Query: 438 V 438
+
Sbjct: 364 I 364
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 166/367 (45%), Gaps = 45/367 (12%)
Query: 39 SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIV 98
SV ++N +L ++ LF++M PD T+ T+I+S G A S +
Sbjct: 154 SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 213
Query: 99 RKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARL 155
+K+++ + + + + L+++ + + A IF +L G+ + V+ N+MI+ Y +
Sbjct: 214 QKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKA 273
Query: 156 GDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTN-------- 203
AR L +M E +TVS++++++ Y +N + L A+ +F EM N
Sbjct: 274 KLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTC 333
Query: 204 --------------------------DSKPDELTMVSVFSACGHLGSLSLGIWAVSILNE 237
D +P+ ++ ++ G I ++
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 238 YQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLASHGHGIE 293
I+ +++ YN++I +Y + E+AT + QEM +R + ++Y+T+IS G
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 294 CIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMIDMLGR 353
L K++ G+E D++ Y ++ A GL+ +++ +K+PD I +L +
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 513
Query: 354 VGKLEEA 360
G+ EEA
Sbjct: 514 AGRTEEA 520
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 128/289 (44%), Gaps = 30/289 (10%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVR 61
++NVVT+ TM+ Y K+ + A +M R + ++++ ++S + ++G
Sbjct: 397 EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAAT 456
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF + SSG E D+ + T+I + +G L R L ++K N +TA+ + A
Sbjct: 457 LFQKLRSSGVEIDQVLYQTMIVAYERVG---LMGHAKRLLHELKLPDNIPRETAITIL-A 512
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKM------PERD 172
K G + A +F Q G ++ MI+ Y+R ++F KM P+ +
Sbjct: 513 KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 572
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDE--LTMVSVFSACGHL---GSLSL 227
++ ++ Y + E A +++EM PDE M+S++S+ SL
Sbjct: 573 VIAM--VLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQ 630
Query: 228 GIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLV 276
+ + +N ++ L + +Y R + +A+ + M R ++
Sbjct: 631 RLESDPNVNSKELHLVVAA------LYERADKLNDASRVMNRMRERGIL 673
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 148/318 (46%), Gaps = 18/318 (5%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALET 59
EP NVV + T++ G K+G L A ++M ++ VV++N +L+G SG +
Sbjct: 173 EP--NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
R+ DM+ PD T+ +I G+ A+ + +++ + N ++++
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERD 172
G L A++ FD + G + N V+ N +IS + + + LF +M D
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV 232
++N++I GY Q G+ +A+ +F M+S + PD +T + G + +
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT-PDIITHCILLHGLCVNGEIESALVKF 409
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASH 288
+ E + + I+ YN +I + +E+A +F + D +Y +I GL +
Sbjct: 410 DDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN 469
Query: 289 GHGIECIKLISKMKEDGI 306
G E +LI +MKE+GI
Sbjct: 470 GPRREADELIRRMKEEGI 487
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 20/382 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVRLF 63
++ ++T ++ + + L A KM E S+V++ ++L G+ + L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M+ SG EP+ + T+I G+ +A ++ +++K ++ LL
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
G A + + + + V+ A+I + + G+L A++L+ +M + + V++
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
NS+I G +G A K F +++++ P+ +T ++ S + G+ ++
Sbjct: 285 NSIINGLCMHGRLYDAKKTF-DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
I YN+LI Y + G + A IF M +R D++++ L+ GL +G
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMI 348
+ M+E + Y ++ A +E+ ++F + V PD Y MI
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 349 DMLGRVGKLEEAMKLIHSMPME 370
L + G EA +LI M E
Sbjct: 464 LGLCKNGPRREADELIRRMKEE 485
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 243 SILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLI 298
+++ YN+LI + G + A + EM + D+V+YNTL++GL G + +++
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 299 SKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVD----HYACMIDMLGRV 354
M + I PD +T+ ++ G L+E Q++++ + VD Y +I+ L
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 355 GKLEEAMK---LIHSMPMEPHAGIYGSLLNATRIHKQVELG 392
G+L +A K L+ S P+ Y +L++ + V+ G
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 164/349 (46%), Gaps = 18/349 (5%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALET 59
EP ++VT+T+++ GY ++ A FD++ + +VV++ ++ ++
Sbjct: 150 EP--DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
V LFN M ++G+ P+ T+ +++ +G A ++R + K + N TAL+D
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 120 HAKCGNLKAAQEIFD---QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
K G L A+E+++ Q+ VY + + ++I+ G L AR +F M +
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV 232
V + ++I G+ ++ +K+F EM S + +T + +G +
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEM-SQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLASH 288
+ ++ + I YN L+ G +E+A +IF+ M R++ V+Y +I G+
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 289 GHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
G + L + G++P+ ITY +++ GL+ E +F+ +K
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 154/321 (47%), Gaps = 16/321 (4%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKM----PERSVVSWNAMLSGYAQSGAALETVRLF 63
NVVT+TT++ K+ +L A F++M +VV++NA+++G + G + L
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
DM+ EP+ T+ +I + +G A+ + + ++ + + F +L++
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 124 GNLKAAQEIF---DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
G L A+++F ++ G Y N V +I + + + +F +M ++ +T+++
Sbjct: 307 GLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITY 366
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
+I GY G +A ++F +M S+ + PD T + G + + +
Sbjct: 367 TVLIQGYCLVGRPDVAQEVFNQM-SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ ++ ++I+ Y +I + G +E+A +F + ++ ++++Y T+ISG G
Sbjct: 426 KREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIH 485
Query: 293 ECIKLISKMKEDGIEPDRITY 313
E L KMKEDG P+ Y
Sbjct: 486 EADSLFKKMKEDGFLPNESVY 506
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 155 LGDLSF--ARDLFNKM----PERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPD 208
L +L F A DLF +M P + + +++ A+ + I LF++M
Sbjct: 59 LHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM--------Q 110
Query: 209 ELTMVSVFSACG---HLGSLSLGIWAVSILNEYQIKL----SILGYNSLIFMYSRCGSME 261
L + + C H LS S +KL ++ + SL+ Y +E
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIE 170
Query: 262 EATLIFQEMA----TRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGIL 317
+A +F ++ ++V+Y TLI L + H ++L ++M +G P+ +TY ++
Sbjct: 171 DAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 318 TACSHAG-------LLEEGQKVFESIKVPDVDHYACMIDMLGRVGKLEEAMKLIH---SM 367
T G LL + K I+ P+V + +ID +VGKL EA +L + M
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMK--RRIE-PNVITFTALIDAFVKVGKLMEAKELYNVMIQM 287
Query: 368 PMEPHAGIYGSLLNA 382
+ P YGSL+N
Sbjct: 288 SVYPDVFTYGSLING 302
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 188/380 (49%), Gaps = 20/380 (5%)
Query: 7 RNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVS----WNAMLSGYAQSGAALETVRL 62
RNVVT+T+++ GY K G ++ A F+ + E+ +V+ + ++ GY ++G + VR+
Sbjct: 294 RNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRV 353
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAK 122
++M+ G + T ++I+ G AE I +++ ++ L+D + +
Sbjct: 354 HDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR 413
Query: 123 CGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVS 175
G + A ++ DQ+ V ++ N ++ Y+R+G L+ M +R D +S
Sbjct: 414 AGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSIL 235
++++ + G+ A+KL++ +++ D +T+ + S + ++ + +
Sbjct: 474 CSTLLEALFKLGDFNEAMKLWENVLARG-LLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVS----YNTLISGLASHGHG 291
N ++ K ++ Y +L Y + G+++EA + + M + + YNTLISG + H
Sbjct: 533 NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592
Query: 292 IECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEG-QKVFESIK---VPDVDHYACM 347
+ L+ +++ G+ P TY ++T + G++++ FE I+ +V+ + +
Sbjct: 593 NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKI 652
Query: 348 IDMLGRVGKLEEAMKLIHSM 367
+ L R+ K++EA L+ +
Sbjct: 653 ANSLFRLDKIDEACLLLQKI 672
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 172/384 (44%), Gaps = 24/384 (6%)
Query: 19 YAKSGNLKTARIYFDKMPERSVV----SWNAMLSGYAQSGAALETVRLFNDMLSSGNEPD 74
YA+ G +K A FD M + S N++LS + G + +++ M+S PD
Sbjct: 165 YAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPD 224
Query: 75 ETTWVTVISSCSSLGDPCLAESIVRKLD-KVKFHSNYFVKTALLDMHAKCGNLKAAQEIF 133
T V+++ G+ A ++ + + N +L++ +A G+++ +
Sbjct: 225 VFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVL 284
Query: 134 ---DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVS----WNSMIAGYAQN 186
+ GV RN V+ ++I Y + G + A +F + E+ V+ + ++ GY +
Sbjct: 285 RLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRT 344
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G+ A+++ MI + + S+ + G L S +N++ +K
Sbjct: 345 GQIRDAVRVHDNMIEIG-VRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATRDLV----SYNTLISGLASHGHGIECIKLISKMK 302
YN+L+ Y R G ++EA + +M +++V +YN L+ G + G + + L M
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMML 463
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFESI----KVPDVDHYACMIDMLGRVGKLE 358
+ G+ D I+ +L A G E K++E++ + D MI L ++ K+
Sbjct: 464 KRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVN 523
Query: 359 EAMKLIHSMPM---EPHAGIYGSL 379
EA +++ ++ + +P Y +L
Sbjct: 524 EAKEILDNVNIFRCKPAVQTYQAL 547
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 174/449 (38%), Gaps = 92/449 (20%)
Query: 11 TWTTMVTGYAKSGNLKTARIYFDKMPERSVV----SWNAMLSGYAQSGAALETVRLFNDM 66
T+ T+V GY ++G + A D+M ++ VV ++N +L GY++ GA + + L+ M
Sbjct: 403 TYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 67 LSSGNEPDETTWVTVISSCSSLGD---------PCLAESIVR-------------KLDKV 104
L G DE + T++ + LGD LA ++ K++KV
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 105 K-----------FHSNYFVKT--ALLDMHAKCGNLK---AAQEIFDQLGVYRNSVSCNAM 148
F V+T AL + K GNLK A +E ++ G++ N +
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 582
Query: 149 ISAYARLGDLSFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTND 204
IS + L+ DL ++ R ++ ++I G+ G A EMI
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Query: 205 S-----------------KPDELTMV-----------------SVFSACGHLGSLSLGIW 230
+ K DE ++ F L
Sbjct: 643 TLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKI 702
Query: 231 AVSILNEYQIKLSI---LGYNSLIFMYSRCGSMEEATLIFQEMATRDLV-----SYNTLI 282
A S+ N KL + + YN I + G +E+A +F ++ + D +Y LI
Sbjct: 703 AESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILI 762
Query: 283 SGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----V 338
G A G + L +M GI P+ +TY ++ G ++ Q++ +
Sbjct: 763 HGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGIT 822
Query: 339 PDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
P+ Y +ID L + G + EAM+L M
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 140/320 (43%), Gaps = 26/320 (8%)
Query: 9 VVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVS----WNAMLSGYAQSGAALETVRLFN 64
V T+ + GY K GNLK A + M + + +N ++SG + + L
Sbjct: 541 VQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVI 600
Query: 65 DMLSSGNEPDETTWVTVISSCSSLG--DPCLAESIVRKLDKVKFHSNYFVKTA-----LL 117
++ + G P T+ +I+ ++G D A + + N K A L
Sbjct: 601 ELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLD 660
Query: 118 DMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DT 173
+ C L+ + FD L S+ SA L A + N P++ +
Sbjct: 661 KIDEACLLLQKIVD-FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNN 719
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVS 233
+ +N IAG + G+ A KLF +++S++ PDE T + C G ++ A +
Sbjct: 720 IVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDIN---KAFT 776
Query: 234 ILNEYQIK---LSILGYNSLIFMYSRCGSMEEATLIFQEMA----TRDLVSYNTLISGLA 286
+ +E +K +I+ YN+LI + G+++ A + ++ T + ++YNTLI GL
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 287 SHGHGIECIKLISKMKEDGI 306
G+ E ++L KM E G+
Sbjct: 837 KSGNVAEAMRLKEKMIEKGL 856
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 133/286 (46%), Gaps = 17/286 (5%)
Query: 97 IVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQLGVYRN---SVSCNAMISAYA 153
+VR + F F +L ++A+ G +K A +FD +G Y +SCN+++S
Sbjct: 144 LVRVFKEFSFSPTVF--DMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLV 201
Query: 154 RLGDLSFARDLFNKM----PERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDE 209
R G+ A ++++M D + + ++ Y ++G A+ KE S+ + +
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNV 261
Query: 210 LTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQE 269
+T S+ + +G + + +++E + +++ Y SLI Y + G MEEA +F+
Sbjct: 262 VTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFEL 321
Query: 270 MATRDLVS----YNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGL 325
+ + LV+ Y L+ G G + +++ M E G+ + ++ +G
Sbjct: 322 LKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 326 LEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
L E +++F + PD Y ++D R G ++EA+KL M
Sbjct: 382 LVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 238 YQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR-----DLVSYNTLISGLASHGHGI 292
+++ + + ++ Y R G++++A + +E + ++V+YN+LI+G A G
Sbjct: 219 FEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVE 278
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMI 348
+++ M E G+ + +TY ++ GL+EE + VFE +K V D Y ++
Sbjct: 279 GMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLM 338
Query: 349 DMLGRVGKLEEAMKLIHSM---PMEPHAGIYGSLLNA 382
D R G++ +A+++ +M + + I SL+N
Sbjct: 339 DGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLING 375
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 244 ILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKE 303
I YNS+I MYS CGS+E+A +F M R+L ++ +I A +G G + I S+ K+
Sbjct: 216 ISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQ 275
Query: 304 DGIEPDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLE 358
+G +PD + I AC G + EG FES+ +P ++HY ++ ML G L+
Sbjct: 276 EGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLD 335
Query: 359 EAMKLIHSMPMEPHAGIYGSLLNATRIHKQVELGE 393
EA++ + S MEP+ ++ +L+N +R+H + LG+
Sbjct: 336 EALRFVES--MEPNVDLWETLMNLSRVHGDLILGD 368
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 14/190 (7%)
Query: 123 CGNLKAAQE-------IFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVS 175
CG+ +A QE I +G+ S + N++I Y+ G + A +FN MPER+ +
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDIS-AYNSIIEMYSGCGSVEDALTVFNSMPERNLET 249
Query: 176 WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SI 234
W +I +A+NG+ AI F +KPD +F ACG LG ++ G+ S+
Sbjct: 250 WCGVIRCFAKNGQGEDAIDTFSR-FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESM 308
Query: 235 LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGH---G 291
EY I + Y SL+ M + G ++EA L F E ++ + TL++ HG G
Sbjct: 309 YKEYGIIPCMEHYVSLVKMLAEPGYLDEA-LRFVESMEPNVDLWETLMNLSRVHGDLILG 367
Query: 292 IECIKLISKM 301
C ++ ++
Sbjct: 368 DRCQDMVEQL 377
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 46/83 (55%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRLFNDML 67
++ + +++ Y+ G+++ A F+ MPER++ +W ++ +A++G + + F+
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 68 SSGNEPDETTWVTVISSCSSLGD 90
GN+PD + + +C LGD
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGD 297
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 167/374 (44%), Gaps = 64/374 (17%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVR 61
+R+ T+T M+ + G A F++M +VV +N ++ A+ + ++
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKV----KFHSNYFVKTALL 117
+F+ M+ +G P+E T+ S L + +AE + +LD V K + + + L+
Sbjct: 327 VFSRMVETGCRPNEYTY-------SLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLV 379
Query: 118 DMHAKCGNLKAAQEIFDQL--------------------------------------GVY 139
+K G++ A +F + GV
Sbjct: 380 RTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVV 439
Query: 140 RNSVSCNAMISAYARLGDLSFARDLFNKM----PERDTVSWNSMIAGYAQNGESLMAIKL 195
+++ N + SA +L +S DLF KM P D ++N +IA + + GE AI +
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINI 499
Query: 196 FKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYS 255
F+E+ +D KPD ++ S+ + G G + + E + ++ Y++L+ +
Sbjct: 500 FEEL-ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFG 558
Query: 256 RCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
+ +E A +F+EM + ++V+YN L+ L +G E + L SKMK+ G+ PD I
Sbjct: 559 KTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSI 618
Query: 312 TYIGI--LTACSHA 323
TY + L + SH
Sbjct: 619 TYTVLERLQSVSHG 632
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 170/401 (42%), Gaps = 93/401 (23%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERS----VVSWNAMLSGYAQSGAALETVRLF 63
NV + ++ + K GN+ A+ FD++ +RS VVS+N +++GY + G E RL
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+ M S PD T+ +AL++ K
Sbjct: 299 HQMEKSRTRPDVFTY-----------------------------------SALINALCKE 323
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
+ A +FD++ G+ N V +I ++R G++ ++ + KM + D V +
Sbjct: 324 NKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLY 383
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N+++ G+ +NG+ + A + MI +PD++T
Sbjct: 384 NTLVNGFCKNGDLVAARNIVDGMIRRG-LRPDKIT------------------------- 417
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
Y +LI + R G +E A I +EM D V ++ L+ G+ G I
Sbjct: 418 ----------YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMI 348
+ + + +M GI+PD +TY ++ A G + G K+ + ++ VP V Y ++
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 349 DMLGRVGKLEEAMKLIHSM---PMEPHAGIYGSLLNATRIH 386
+ L ++G+++ A L+ +M + P Y +LL H
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRH 568
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 148/333 (44%), Gaps = 19/333 (5%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTA-RIYFDKMPERS---VVSWNAMLSGYAQSGAALETVR 61
Q VV++ T++ GY K GNL R+ R+ V +++A+++ +
Sbjct: 272 QPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHG 331
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF++M G P++ + T+I S G+ L + +K+ + + L++
Sbjct: 332 LFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFC 391
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERDTV 174
K G+L AA+ I D + G+ + ++ +I + R GD+ A ++ +M E D V
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 175 SWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI 234
+++++ G + G + A + +EM+ KPD++T + A G G +
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAG-IKPDDVTYTMMMDAFCKKGDAQTGFKLLKE 510
Query: 235 LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM----ATRDLVSYNTLISGLASHGH 290
+ S++ YN L+ + G M+ A ++ M D ++YNTL+ G H H
Sbjct: 511 MQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG--HHRH 568
Query: 291 GIECIKLISKMKEDGIEPDRITYIGILTACSHA 323
+ I K E GI D +Y I+ A
Sbjct: 569 ANSSKRYIQK-PEIGIVADLASYKSIVNELDRA 600
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 126/267 (47%), Gaps = 17/267 (6%)
Query: 131 EIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERD----TVSWNSMIAGYAQN 186
EI D G N N +++ + + G++S A+ +F+++ +R VS+N++I GY +
Sbjct: 230 EILDA-GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKV 288
Query: 187 GESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILG 246
G +L K + + ++PD T ++ +A + + + + + +
Sbjct: 289 GNLDEGFRL-KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 247 YNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMK 302
+ +LI +SR G ++ +Q+M ++ D+V YNTL++G +G + ++ M
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 303 EDGIEPDRITYIGILTACSHAGLLEEGQKVFES-----IKVPDVDHYACMIDML--GRVG 355
G+ PD+ITY ++ G +E ++ + I++ V A + M GRV
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 356 KLEEAMKLIHSMPMEPHAGIYGSLLNA 382
E A++ + ++P Y +++A
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDA 494
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 18/338 (5%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALE 58
E + +VVT+T+++ Y+ G ++ R F+ M + ++VS+NA++ YA G +
Sbjct: 182 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 241
Query: 59 TVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLD 118
+ + D+ +G PD ++ +++S P A+ + + K + N AL+D
Sbjct: 242 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 301
Query: 119 MHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER---- 171
+ G L A EIF Q+ G+ N VS +++A +R + + R
Sbjct: 302 AYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINL 361
Query: 172 DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA 231
+T ++NS I Y E AI L++ M K D +T + S + I
Sbjct: 362 NTAAYNSAIGSYINAAELEKAIALYQSM-RKKKVKADSVTFTILISGSCRMSKYPEAISY 420
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM----ATRDLVSYNTLISGL-A 286
+ + + I L+ Y+S++ YS+ G + EA IF +M D+++Y +++ A
Sbjct: 421 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 480
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAG 324
S G C +L +M+ +GIEPD I ++ A + G
Sbjct: 481 SEKWGKAC-ELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 170/377 (45%), Gaps = 22/377 (5%)
Query: 12 WTTMVTGYAKSGNLKTARIYFDKMPERS----VVSWNAMLSGYAQSGAALETVRLFNDML 67
+ M+ +A+ + AR F +M + S +++A+++ + ++G + L +DML
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ P +T+ +I++C S G+ A + +K+ + +L +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 128 AAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER------DTVSWNS 178
A F+ + V ++ + N +I ++LG S A DLFN M E+ D V++ S
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
++ Y+ GE +F+ M++ KP+ ++ ++ A G + + + +
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIF----QEMATRDLVSYNTLISGLASHGHGIEC 294
I ++ Y L+ Y R +A +F +E ++V+YN LI S+G E
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVD----HYACMIDM 350
+++ +M++DGI+P+ ++ +L ACS + V + + ++ Y I
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 372
Query: 351 LGRVGKLEEAMKLIHSM 367
+LE+A+ L SM
Sbjct: 373 YINAAELEKAIALYQSM 389
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 161/349 (46%), Gaps = 18/349 (5%)
Query: 4 EPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPE----RSVVSWNAMLSGYAQSGAALET 59
EP R VT ++V G+ + + A DKM E +V++NA++ ++ +
Sbjct: 152 EPDR--VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 60 VRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDM 119
F ++ G P+ T+ +++ + A ++ + K K N +ALLD
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 120 HAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----D 172
K G + A+E+F+++ + + V+ +++I+ + A +F+ M + D
Sbjct: 270 FVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
Query: 173 TVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV 232
VS+N++I G+ + +KLF+EM S + +T ++ G +
Sbjct: 330 VVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 233 SILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASH 288
S ++ + I I YN L+ G +E+A +IF++M R D+V+Y T+I G+
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKT 448
Query: 289 GHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
G E L + G++PD +TY +++ GLL E + ++ +K
Sbjct: 449 GKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 168/360 (46%), Gaps = 21/360 (5%)
Query: 42 SWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKL 101
++N +++ + + + ML G EPD T ++++ A S+V K+
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 102 DKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDL 158
++ + + A++D K + A + F ++ G+ N V+ A+++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 159 SFARDLFNKMPER----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVS 214
S A L + M ++ + +++++++ + +NG+ L A +LF+EM+ + PD +T S
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSS 300
Query: 215 VFSA-CGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR 273
+ + C H + ++ ++ YN+LI + + +E+ +F+EM+ R
Sbjct: 301 LINGLCLH-DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 274 DLVS----YNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEG 329
LVS YNTLI G G + + S+M GI PD TY +L G LE+
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
Query: 330 QKVFESIKVPDVD----HYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNA 382
+FE ++ ++D Y +I + + GK+EEA L S+ ++P Y ++++
Sbjct: 420 LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 51/320 (15%)
Query: 8 NVVTWTTMVTGYAKSGNL-KTARIYFDKMPER---SVVSWNAMLSGYAQSGAALETVRLF 63
NVVT+T +V G S AR+ D + ++ +V++++A+L + ++G LE LF
Sbjct: 224 NVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+M+ +PD T+ ++I+ CL + I
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGL------CLHDRI-------------------------- 311
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
A ++FD + G + VS N +I+ + + + LF +M +R +TV++
Sbjct: 312 ---DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N++I G+ Q G+ A + F +M S PD T + G L + +
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGIS-PDIWTYNILLGGLCDNGELEKALVIFEDMQ 427
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ ++ L I+ Y ++I + G +EEA +F ++ + D+V+Y T++SGL + G
Sbjct: 428 KREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLH 487
Query: 293 ECIKLISKMKEDGIEPDRIT 312
E L +KMK++G+ + T
Sbjct: 488 EVEALYTKMKQEGLMKNDCT 507
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 154/341 (45%), Gaps = 19/341 (5%)
Query: 58 ETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALL 117
+ + LF+DM+ S P + ++S+ L + S+ +K++ + ++ + ++
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 118 DMHAKCGNLKAAQEIFD---QLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE---- 170
+ C + A I +LG + V+ ++++ + R +S A L +KM E
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 171 RDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIW 230
D V++N++I + A FKE I +P+ +T ++ + + S
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 231 AVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLA 286
+S + + +I +++ Y++L+ + + G + EA +F+EM D+V+Y++LI+GL
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVD 342
H E ++ M G D ++Y ++ A +E+G K+F + V +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 343 HYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLL 380
Y +I + G +++A + M + P Y LL
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 122/265 (46%), Gaps = 16/265 (6%)
Query: 143 VSCNAMISAYARLGDLSFARDLFNKMP----ERDTVSWNSMIAGYAQNGESLMAIKLFKE 198
V N ++SA +L L KM D ++N +I + + +A+ + +
Sbjct: 86 VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 145
Query: 199 MISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCG 258
M+ +PD +T+ S+ + +S + V + E K I+ YN++I +
Sbjct: 146 MLKLG-YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 259 SMEEATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
+ +A F+E+ + ++V+Y L++GL + + +L+S M + I P+ ITY
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 315 GILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPME 370
+L A G + E +++FE + PD+ Y+ +I+ L +++EA ++ M +
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 371 ---PHAGIYGSLLNATRIHKQVELG 392
Y +L+N K+VE G
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDG 349
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 178/386 (46%), Gaps = 23/386 (5%)
Query: 27 TARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVI 82
TA I F + PE +V S+N ++ Q G E L M G PD ++ TV+
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 83 SSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVY 139
+ G+ ++ + + N ++ +++ + + L A+E F ++ G+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 140 RNSVSCNAMISAYARLGDLSFARDLFNKMPERD----TVSWNSMIAGYAQNGESLMAIKL 195
++V +I + + GD+ A F +M RD +++ ++I+G+ Q G+ + A KL
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 196 FKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYS 255
F EM +PD +T + + G + + + + +++ Y +LI
Sbjct: 409 FHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 256 RCGSMEEATLIFQEM----ATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
+ G ++ A + EM ++ +YN++++GL G+ E +KL+ + + G+ D +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 312 TYIGILTACSHAGLLEEGQKVFESI----KVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
TY ++ A +G +++ Q++ + + P + + +++ G LE+ KL++ M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 368 ---PMEPHAGIYGSLLNATRIHKQVE 390
+ P+A + SL+ I ++
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLK 613
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 169/379 (44%), Gaps = 49/379 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERS----VVSWNAMLSGYAQSGAALETVRLF 63
+ V +TT++ G+ K G+++ A +F +M R V+++ A++SG+ Q G +E +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
++M G EPD T+ +I+ G A + + + N T L+D K
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERDTVSW 176
G+L +A E+ ++ G+ N + N++++ + G++ A L + DTV++
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTM-VSVFSACGHLGSLSLGIWAVSIL 235
+++ Y ++GE A ++ KEM+ +P +T V + C H G L G ++ +
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLH-GMLEDGEKLLNWM 587
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECI 295
I + +NSL+ Y +++ AT I+++M +R
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR---------------------- 625
Query: 296 KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDHYACMIDML 351
G+ PD TY ++ A ++E +F+ +K V Y+ +I
Sbjct: 626 ---------GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 352 GRVGKLEEAMKLIHSMPME 370
+ K EA ++ M E
Sbjct: 677 LKRKKFLEAREVFDQMRRE 695
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 153/318 (48%), Gaps = 16/318 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKM----PERSVVSWNAMLSGYAQSGAALETVRLF 63
+V+T+T +++G+ + G++ A F +M E V++ +++GY ++G + R+
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
N M+ +G P+ T+ T+I GD A ++ ++ K+ N F ++++ K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 124 GNLKAAQEI---FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM----PERDTVSW 176
GN++ A ++ F+ G+ ++V+ ++ AY + G++ A+++ +M + V++
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N ++ G+ +G KL M++ + P+ T S+ +L +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIA-PNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ Y +L+ + + +M+EA +FQEM + + +Y+ LI G +
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 293 ECIKLISKMKEDGIEPDR 310
E ++ +M+ +G+ D+
Sbjct: 684 EAREVFDQMRREGLAADK 701
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 178/386 (46%), Gaps = 23/386 (5%)
Query: 27 TARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVI 82
TA I F + PE +V S+N ++ Q G E L M G PD ++ TV+
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 83 SSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLKAAQEIFDQL---GVY 139
+ G+ ++ + + N ++ +++ + + L A+E F ++ G+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 140 RNSVSCNAMISAYARLGDLSFARDLFNKMPERD----TVSWNSMIAGYAQNGESLMAIKL 195
++V +I + + GD+ A F +M RD +++ ++I+G+ Q G+ + A KL
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 196 FKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYS 255
F EM +PD +T + + G + + + + +++ Y +LI
Sbjct: 409 FHEMFCKG-LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 256 RCGSMEEATLIFQEM----ATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRI 311
+ G ++ A + EM ++ +YN++++GL G+ E +KL+ + + G+ D +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 312 TYIGILTACSHAGLLEEGQKVFESI----KVPDVDHYACMIDMLGRVGKLEEAMKLIHSM 367
TY ++ A +G +++ Q++ + + P + + +++ G LE+ KL++ M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 368 ---PMEPHAGIYGSLLNATRIHKQVE 390
+ P+A + SL+ I ++
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLK 613
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 169/379 (44%), Gaps = 49/379 (12%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERS----VVSWNAMLSGYAQSGAALETVRLF 63
+ V +TT++ G+ K G+++ A +F +M R V+++ A++SG+ Q G +E +LF
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
++M G EPD T+ +I+ G A + + + N T L+D K
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERDTVSW 176
G+L +A E+ ++ G+ N + N++++ + G++ A L + DTV++
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 529
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTM-VSVFSACGHLGSLSLGIWAVSIL 235
+++ Y ++GE A ++ KEM+ +P +T V + C H G L G ++ +
Sbjct: 530 TTLMDAYCKSGEMDKAQEILKEMLGKG-LQPTIVTFNVLMNGFCLH-GMLEDGEKLLNWM 587
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECI 295
I + +NSL+ Y +++ AT I+++M +R
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR---------------------- 625
Query: 296 KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVP----DVDHYACMIDML 351
G+ PD TY ++ A ++E +F+ +K V Y+ +I
Sbjct: 626 ---------GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 352 GRVGKLEEAMKLIHSMPME 370
+ K EA ++ M E
Sbjct: 677 LKRKKFLEAREVFDQMRRE 695
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 153/318 (48%), Gaps = 16/318 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKM----PERSVVSWNAMLSGYAQSGAALETVRLF 63
+V+T+T +++G+ + G++ A F +M E V++ +++GY ++G + R+
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
N M+ +G P+ T+ T+I GD A ++ ++ K+ N F ++++ K
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 124 GNLKAAQEI---FDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKM----PERDTVSW 176
GN++ A ++ F+ G+ ++V+ ++ AY + G++ A+++ +M + V++
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N ++ G+ +G KL M++ + P+ T S+ +L +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIA-PNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ Y +L+ + + +M+EA +FQEM + + +Y+ LI G +
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 293 ECIKLISKMKEDGIEPDR 310
E ++ +M+ +G+ D+
Sbjct: 684 EAREVFDQMRREGLAADK 701
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 179/397 (45%), Gaps = 23/397 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
+V + ++ G K + A FD+M R S++++N ++ GY ++G ++ ++
Sbjct: 213 SVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVR 272
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
M + EP T+ T++ G AE++++++ + F + F + L D ++
Sbjct: 273 ERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSN 332
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
+AA +++ GV N+ +C+ +++A + G + A ++ + + + V +
Sbjct: 333 EKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY 392
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N+MI GY + G+ L+ ++ E + KPD L + LG + V+ +
Sbjct: 393 NTMIDGYCRKGD-LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK 451
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
+ S+ YN LI Y R ++ I +EM ++VSY TLI+ L +
Sbjct: 452 LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLL 511
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVD----HYACMI 348
E + M++ G+ P Y ++ C G +E+ + + + ++ Y +I
Sbjct: 512 EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLI 571
Query: 349 DMLGRVGKLEEAMKL---IHSMPMEPHAGIYGSLLNA 382
D L GKL EA L I ++P Y SL++
Sbjct: 572 DGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISG 608
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 155/359 (43%), Gaps = 22/359 (6%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVRLF 63
N V + TM+ GY + G+L AR+ + M ++ + +++N ++ + + G +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 64 NDMLSSGNEPDETTWVTVISSCSSL--GDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
N M G P T+ +I D C I+++++ N L++
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCF--DILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 122 KCGNLKAAQEI---FDQLGVYRNSVSCNAMISAYARLGDLS----FARDLFNKMPERDTV 174
K L AQ + + GV N +I G + F++++ K E + V
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565
Query: 175 SWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI 234
++N++I G + G+ A L E IS KPD T S+ S G G++ I
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLE-ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 235 LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR-DLVSYNTLISGLASHGHGIE 293
+ IK ++ Y+ LI + ++ G +E +F EM+ + DL+ YN ++ A HG +
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEK 683
Query: 294 CIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMI 348
L +M E I D+ TY ++ G L E + + + + P+ D Y ++
Sbjct: 684 AFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIV 742
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 153/345 (44%), Gaps = 27/345 (7%)
Query: 59 TVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLD 118
T+ +F ++L S P + + I + L D + ++ + + + F+ L+D
Sbjct: 163 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLID 222
Query: 119 MHAKCGNLKAAQEIFDQLGVYR---NSVSCNAMISAYARLGDLSFARDLFNKMP----ER 171
K + A+++FD++ R + ++ N +I Y + G+ + + +M E
Sbjct: 223 GLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 172 DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFS--ACGHLGSLSLGI 229
+++N+++ G + G A + KEM PD T +F + +LG+
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMKDLG-FVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 230 WAVSILNEYQIKLSILGYNSLIFMYSRC--GSMEEATLIF-QEMA---TRDLVSYNTLIS 283
+ ++ + +K++ Y I + + C G +E+A I +EMA + V YNT+I
Sbjct: 342 YETAV--DSGVKMN--AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Query: 284 GLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV----P 339
G G + I M++ G++PD + Y ++ G +E +K +K+ P
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457
Query: 340 DVDHYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLN 381
V+ Y +I GR + ++ ++ M P+ YG+L+N
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 18/338 (5%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALE 58
E + +VVT+T+++ Y+ G ++ R F+ M + ++VS+NA++ YA G +
Sbjct: 314 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGT 373
Query: 59 TVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLD 118
+ + D+ +G PD ++ +++S P A+ + + K + N AL+D
Sbjct: 374 ALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALID 433
Query: 119 MHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER---- 171
+ G L A EIF Q+ G+ N VS +++A +R + + R
Sbjct: 434 AYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINL 493
Query: 172 DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA 231
+T ++NS I Y E AI L++ M K D +T + S + I
Sbjct: 494 NTAAYNSAIGSYINAAELEKAIALYQSM-RKKKVKADSVTFTILISGSCRMSKYPEAISY 552
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM----ATRDLVSYNTLISGL-A 286
+ + + I L+ Y+S++ YS+ G + EA IF +M D+++Y +++ A
Sbjct: 553 LKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNA 612
Query: 287 SHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAG 324
S G C +L +M+ +GIEPD I ++ A + G
Sbjct: 613 SEKWGKAC-ELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 170/377 (45%), Gaps = 22/377 (5%)
Query: 12 WTTMVTGYAKSGNLKTARIYFDKMPERS----VVSWNAMLSGYAQSGAALETVRLFNDML 67
+ M+ +A+ + AR F +M + S +++A+++ + ++G + L +DML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 68 SSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGNLK 127
+ P +T+ +I++C S G+ A + +K+ + +L +
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 128 AAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER------DTVSWNS 178
A F+ + V ++ + N +I ++LG S A DLFN M E+ D V++ S
Sbjct: 266 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 325
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
++ Y+ GE +F+ M++ KP+ ++ ++ A G + + + +
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEG-LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIF----QEMATRDLVSYNTLISGLASHGHGIEC 294
I ++ Y L+ Y R +A +F +E ++V+YN LI S+G E
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVD----HYACMIDM 350
+++ +M++DGI+P+ ++ +L ACS + V + + ++ Y I
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 504
Query: 351 LGRVGKLEEAMKLIHSM 367
+LE+A+ L SM
Sbjct: 505 YINAAELEKAIALYQSM 521
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 107/198 (54%), Gaps = 13/198 (6%)
Query: 208 DELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKL----SILGYNSLIFMYSRCGSMEEA 263
D + ++ + CG +L A +++E I L + N++I MYS C S+++A
Sbjct: 118 DLIRLLGLAKLCGKPEALE----AARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDA 173
Query: 264 TLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHA 323
+F+EM + + ++ ++G+G E I L ++ KE+G +P+ + + + C+
Sbjct: 174 LKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLT 233
Query: 324 GLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMKLIHSMPMEPHAGIYGS 378
G ++EG F+++ VP ++HY + ML G L+EA+ + MPMEP ++ +
Sbjct: 234 GDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWET 293
Query: 379 LLNATRIHKQVELGELAA 396
L+N +R+H VELG+ A
Sbjct: 294 LMNLSRVHGDVELGDRCA 311
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 146 NAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDS 205
NA+I Y+ + A +F +MPE ++ + M+ + NG AI LF +
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTR-FKEEGN 216
Query: 206 KPDELTMVSVFSACGHLGSLSLG-IWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEAT 264
KP+ VFS C G + G + ++ EY I S+ Y+S+ M + G ++EA
Sbjct: 217 KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEAL 276
Query: 265 LIFQEMATRDLVS-YNTLISGLASHGH---GIECIKLISKMKEDGIEPDRITYIGIL 317
+ M V + TL++ HG G C +L+ K+ D D+++ G++
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL--DATRLDKVSSAGLV 331
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 190/421 (45%), Gaps = 56/421 (13%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVRLF 63
+V T+TT+++G+ ++G +++A F++M + ++ ++NA + Y G E +++F
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIF 442
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+++ G PD TW T+++ G + +++ + F L+ +++C
Sbjct: 443 DEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE----RDTVSW 176
G+ + A ++ ++ GV + + N +++A AR G + + +M + + +++
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 177 NSMIAGYAQNGE-SLM----------------------------------AIKLFKEMIS 201
S++ YA E LM A + F E+
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 202 TNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSME 261
S PD T+ S+ S G ++ + + E S+ YNSL++M+SR
Sbjct: 623 RGFS-PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 262 EATLIFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGIL 317
++ I +E+ + D++SYNT+I + + ++ S+M+ GI PD ITY +
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Query: 318 TACSHAGLLEEGQKVFES-IK---VPDVDHYACMIDMLGRVGKLEEAMKLIHSMP-MEPH 372
+ + + EE V IK P+ + Y ++D ++ + +EA + + ++PH
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPH 801
Query: 373 A 373
A
Sbjct: 802 A 802
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 157/387 (40%), Gaps = 46/387 (11%)
Query: 10 VTWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVRLFND 65
VT+ ++ Y KS K A ++M S+V++N+++S YA+ G E + L N
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 66 MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
M G +PD T+ T++S G A SI ++ N A + M+ G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 126 LKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSMIAGYAQ 185
+IFD++ V C D V+WN+++A + Q
Sbjct: 435 FTEMMKIFDEINV------CGL----------------------SPDIVTWNTLLAVFGQ 466
Query: 186 NGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSIL 245
NG +FKEM P+ T ++ SA GS + + + + +
Sbjct: 467 NGMDSEVSGVFKEMKRAG-FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLS 525
Query: 246 GYNSLIFMYSRCGSMEEATLIFQEMAT-RDLVSYNTLISGLASHGHGIECIKLISKMKED 304
YN+++ +R G E++ + EM R + T S L ++ +G E I L+ + E+
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE-IGLMHSLAEE 584
Query: 305 ----GIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGR--- 353
IEP + ++ CS LL E ++ F +K PD+ M+ + GR
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQM 644
Query: 354 VGKLEEAMKLIHSMPMEPHAGIYGSLL 380
V K + + P Y SL+
Sbjct: 645 VAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 21/267 (7%)
Query: 116 LLDMHAKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERD 172
++ M K G + +A +F+ L G + S ++ISA+A G A ++F KM E
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 173 T----VSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLG 228
+++N ++ + + G I E + ++ PD T ++ + C GSL
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR-GSLHQ- 296
Query: 229 IWAVSILNEYQ---IKLSILGYNSLIFMYSRCGSMEEATLIFQEMA----TRDLVSYNTL 281
A + E + + YN+L+ +Y + +EA + EM + +V+YN+L
Sbjct: 297 -EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 282 ISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK---- 337
IS A G E ++L ++M E G +PD TY +L+ AG +E +FE ++
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 338 VPDVDHYACMIDMLGRVGKLEEAMKLI 364
P++ + I M G GK E MK+
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIF 442
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 99/458 (21%), Positives = 189/458 (41%), Gaps = 64/458 (13%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
++VT+ ++++ YA+ G L A ++M E+ V ++ +LSG+ ++G + +F
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+M ++G +P+ T+ I + G I +++ + LL + +
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE----RDTVSW 176
G +F ++ G + N +ISAY+R G A ++ +M + D ++
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSA------CGHLGSLSLGIW 230
N+++A A+ G + K+ EM KP+ELT S+ A G + SL+ ++
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 231 -----------------------------AVSILNEYQIKLSILGYNSLIFMYSRCGSME 261
A S L E I NS++ +Y R +
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 262 EATLIFQEMATR----DLVSYNTLI---SGLASHGHGIECIKLISKMKEDGIEPDRITYI 314
+A + M R + +YN+L+ S A G E ++ I GI+PD I+Y
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA---KGIKPDIISYN 703
Query: 315 GILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM--- 367
++ A + + ++F ++ VPDV Y I EEA+ ++ M
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH 763
Query: 368 PMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEPH 405
P+ Y S+++ + + +L L ++PH
Sbjct: 764 GCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPH 801
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 21/293 (7%)
Query: 165 FNKMPERDTVSWNSMIAGYAQNGESLMAIKLFKEMISTND--SKPDELTMVSVFSACGHL 222
F PE + + + G + + +A++ F + D S D + + S G
Sbjct: 127 FKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKE 186
Query: 223 GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM----ATRDLVSY 278
G +S + L E L + Y SLI ++ G EA +F++M L++Y
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 279 NTLISGLASHGHGIECI-KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK 337
N +++ G I L+ KMK DGI PD TY ++T C L +E +VFE +K
Sbjct: 247 NVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMK 306
Query: 338 VPDVDH----YACMIDMLGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNATR----IH 386
+ Y ++D+ G+ + +EAMK+++ M + P Y SL++A +
Sbjct: 307 AAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLD 366
Query: 387 KQVELGELAAAKLFTVEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQGVK 439
+ +EL A K +P + LLS + AG+ + ++ MR G K
Sbjct: 367 EAMELKNQMAEK--GTKPDVFTYTTLLSG-FERAGKVESAMSIFEEMRNAGCK 416
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 7/222 (3%)
Query: 190 LMAIKLFKEMISTND--SKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGY 247
L +L+K+ I D + PD V +F +C +L SL + + +
Sbjct: 215 LCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLN 274
Query: 248 NSLIFMYSRCGSMEEATLIFQEMATRDLVSYNTLISGLASHGHGIECIKLISKMKEDGIE 307
N +I M+ C S+ +A +F M +D+ S++ ++ + +G G + + L +M + G++
Sbjct: 275 NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLK 334
Query: 308 PDRITYIGILTACSHAGLLEEGQKVFESIK-----VPDVDHYACMIDMLGRVGKLEEAMK 362
P+ T++ + AC+ G +EE F+S+K P +HY ++ +LG+ G L EA +
Sbjct: 335 PNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQ 394
Query: 363 LIHSMPMEPHAGIYGSLLNATRIHKQVELGELAAAKLFTVEP 404
I +P EP A + ++ N R+H ++L + + V+P
Sbjct: 395 YIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDP 436
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 44/220 (20%)
Query: 61 RLFND---MLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALL 117
RL+ D +L G PD +V + SC++L + L+ K ++F+++
Sbjct: 219 RLYKDAIELLDKGAMPDRECFVLLFESCANL----------KSLEHSKKVHDHFLQSK-- 266
Query: 118 DMHAKCGNLKAAQEIFDQLGVYRNSVSCNAM-ISAYARLGDLSFARDLFNKMPERDTVSW 176
+R N M IS + ++ A+ +F+ M ++D SW
Sbjct: 267 ---------------------FRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSW 305
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAV-SIL 235
+ M+ Y+ NG A+ LF+EM + + KP+E T ++VF AC +G + S+
Sbjct: 306 HLMMCAYSDNGMGDDALHLFEEM-TKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMK 364
Query: 236 NEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL 275
NE+ I Y ++ + +CG + EA E RDL
Sbjct: 365 NEHGISPKTEHYLGVLGVLGKCGHLVEA-----EQYIRDL 399
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 3 GEPQRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVSWNAMLSGYAQSGAALETVRL 62
G+P+ N +++ + + ++ A+ FD M ++ + SW+ M+ Y+ +G + + L
Sbjct: 269 GDPKLN----NMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHL 324
Query: 63 FNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKT----ALLD 118
F +M G +P+E T++TV +C+++G E D +K KT +L
Sbjct: 325 FEEMTKHGLKPNEETFLTVFLACATVGG---IEEAFLHFDSMKNEHGISPKTEHYLGVLG 381
Query: 119 MHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARL-GDLSF 160
+ KCG+L A++ L + AM + YARL GD+
Sbjct: 382 VLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN-YARLHGDIDL 423
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 168/375 (44%), Gaps = 54/375 (14%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVV----SWNAMLSGYAQSGAALETVRLF 63
+VVT+T +V K+GN A D M ++ ++ ++N ++ G + + + LF
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+M S G +P T++ I D + K
Sbjct: 422 GNMESLGVKPTAYTYIVFI-----------------------------------DYYGKS 446
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE----RDTVSW 176
G+ +A E F+++ G+ N V+CNA + + A+ G A+ +F + + D+V++
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 177 NSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILN 236
N M+ Y++ GE AIKL EM+ N +PD + + S+ + + +
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMME-NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 237 EYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGHGI 292
E ++K +++ YN+L+ + G ++EA +F+ M + + +++NTL L +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 293 ECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK---VPDVDHYACMID 349
+K++ KM + G PD TY I+ G ++E F +K PD ++
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLP 685
Query: 350 MLGRVGKLEEAMKLI 364
+ + +E+A K+I
Sbjct: 686 GVVKASLIEDAYKII 700
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 203/471 (43%), Gaps = 56/471 (11%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPE---RSVVSWNAMLSGYAQSGAALETVRLFN 64
+V T+ T++ G K+G +K A +F +M + V+ +L G ++ + ++
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 65 DML-SSGNEPDETTWVTVISS---------CSSLGDPCLAESIVRKLDKVKFHSNYFVKT 114
+ L + ++P W +I S S + +A I R D +
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSIL--------V 753
Query: 115 ALLDMHAKCGNLKAAQEIFDQ----LGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPE 170
++ K N+ A+ +F++ LGV + N +I + A+D+F ++
Sbjct: 754 PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Query: 171 R----DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSL- 225
D ++N ++ Y ++G+ +L+KEM ST++ + + +T V S G++
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEM-STHECEANTITHNIVISGLVKAGNVD 872
Query: 226 -SLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM----ATRDLVSYNT 280
+L ++ ++++ + Y LI S+ G + EA +F+ M + YN
Sbjct: 873 DALDLY-YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNI 931
Query: 281 LISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKV-- 338
LI+G G L +M ++G+ PD TY ++ G ++EG F+ +K
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 339 --PDVDHYACMIDMLGRVGKLEEAMKLIHSMP----MEPHAGIYGSLLNATRIHKQVELG 392
PDV Y +I+ LG+ +LEEA+ L + M + P Y SL+ I VE
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVE-- 1049
Query: 393 ELAAAKLFT------VEPHNSSNYVLLSNIYALAGRWKEVGNVRNIMRKQG 437
A K++ +EP N + L Y+L+G+ + V M G
Sbjct: 1050 --EAGKIYNEIQRAGLEP-NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 176/405 (43%), Gaps = 25/405 (6%)
Query: 11 TWTTMVTGYAKSGNLKTARIYFDKMP----ERSVVSWNAMLSGYAQSGAALETVRLFNDM 66
T+++++ G K ++ + +M + +V ++ + ++G E + M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 67 LSSGNEPDETTWVTVISS-CSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKCGN 125
G PD T+ +I + C++ C A+ + K+ + + LLD + +
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDC-AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 126 LKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTV----SWNS 178
L + ++ + ++ G + V+ ++ A + G+ A D + M ++ + ++N+
Sbjct: 344 LDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNT 403
Query: 179 MIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEY 238
+I G + A++LF M S KP T + G G + +
Sbjct: 404 LICGLLRVHRLDDALELFGNMESLG-VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 239 QIKLSILGYNSLIFMYSRCGSMEEATLIFQEMA----TRDLVSYNTLISGLASHGHGIEC 294
I +I+ N+ ++ ++ G EA IF + D V+YN ++ + G E
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 295 IKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYACMIDM 350
IKL+S+M E+G EPD I ++ A ++E K+F +K P V Y ++
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 351 LGRVGKLEEAMKLIHSMPME---PHAGIYGSLLNATRIHKQVELG 392
LG+ GK++EA++L M + P+ + +L + + +V L
Sbjct: 583 LGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 157/429 (36%), Gaps = 89/429 (20%)
Query: 42 SWNAMLSGYAQSGAALETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKL 101
+ N ML G E +F+ M + D T++T+ S S G A +RK+
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 102 DKVKFHSNYFVKTALLDMHAKCGNLKAAQEIF---------------------------- 133
+ F N + L+ + K A E++
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 134 ----------DQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSWNSM 179
+ LG+ N + I R G ++ A ++ +M + D V++ +
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSAC-------------------G 220
I + A ++F++M T KPD +T +++ G
Sbjct: 300 IDALCTARKLDCAKEVFEKM-KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 221 HL----------------GSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEAT 264
H+ G+ + ++ + I ++ YN+LI R +++A
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 265 LIFQEMATRDL----VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTAC 320
+F M + + +Y I G + ++ KMK GI P+ + L +
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 321 SHAGLLEEGQKVFESIK----VPDVDHYACMIDMLGRVGKLEEAMKLIHSM---PMEPHA 373
+ AG E +++F +K VPD Y M+ +VG+++EA+KL+ M EP
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 374 GIYGSLLNA 382
+ SL+N
Sbjct: 539 IVVNSLINT 547
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 22/250 (8%)
Query: 206 KPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQIKLSILGYNSLIFMYSRCGSMEEATL 265
K D T +++F + G L +A+ + E+ L+ YN LI + + EA
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAME 209
Query: 266 IFQEMATR----DLVSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRITYIGILTACS 321
+++ M L +Y++L+ GL + L+ +M+ G++P+ T+ +
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269
Query: 322 HAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMPM---EPHAG 374
AG + E ++ + + PDV Y +ID L KL+ A ++ M +P
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329
Query: 375 IYGSLLNATRIHKQVELGELAAAKLFTVEPHNSSN------YVLLSNIYALAGRWKEVGN 428
Y +LL+ ++ +L + K F E + + +L + AG + E +
Sbjct: 330 TYITLLDRFSDNR-----DLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 429 VRNIMRKQGV 438
++MR QG+
Sbjct: 385 TLDVMRDQGI 394
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 211/510 (41%), Gaps = 81/510 (15%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
+V +TT + + K G ++ A F KM E +VV++N ++ G G E
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 64 NDMLSSGNEPDETTW---VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
M+ G EP T+ V ++ +GD A +++++ K F N V L+D
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGD---AYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 121 AKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERDT 173
+ G+L A EI D + G+ S + N +I Y + G A L +M +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGH-LGSLSLGIWAV 232
S+ S+I + A++ EM+ N S L + C H S +L +W
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW-F 494
Query: 233 SILNE-------------------------YQIKLSILG---------YNSLIFMYSRCG 258
LN+ ++I+ ILG YN+LI CG
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI--SGCCG 552
Query: 259 S--MEEATLIFQEMATRDL----VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
++EA + EM R L +Y+ LI GL + E I+ K +G+ PD T
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 313 YIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
Y ++ C A EEGQ+ F+ + P+ Y +I R G+L A++L M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 369 ---MEPHAGIYGSLLNATRIHKQVELGEL--AAAKLFTVEPHNSSNYVLLSNIYALAGRW 423
+ P++ Y SL+ I +VE +L ++ +EP N +Y L + Y G+
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGY---GKL 728
Query: 424 KEVGNVRNIMRKQGVKKITAWSWVEHPSHV 453
++ V ++R+ K + HP+ +
Sbjct: 729 GQMVKVECLLREMHSKNV-------HPNKI 751
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 164/354 (46%), Gaps = 26/354 (7%)
Query: 13 TTMVTGYAKSG-NLKTARIYFDKMPERSVV---SWNAMLSGYAQSGAALETVRLFNDMLS 68
TT+++G K G + K ++F + + VV + NA+L G ++G E R+ ++L
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVK--FHSNYFVKTALLDMHAKCGNL 126
G D ++ T+IS C G L E+ + + VK + + + L+ +
Sbjct: 534 RGCVMDRVSYNTLISGCC--GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 127 KAAQEIFDQL-------GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
+ A + +D VY SV + A F ++ +K + +TV +N +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQ 239
I Y ++G MA++L ++M S P+ T S+ + + +
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGIS-PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLASHGHGIECI 295
++ ++ Y +LI Y + G M + + +EM ++++ ++Y +I G A G+ E
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 296 KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMID 349
+L+++M+E GI PD ITY + G L++G V E+ K D ++YA +I+
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIY-----GYLKQGG-VLEAFKGSDEENYAAIIE 818
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVRLF 63
+V T++ M+ G K+ + + +FD+M ++V V +N ++ Y +SG + L
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
DM G P+ T+ ++I S + A+ + ++ N F TAL+D + K
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
G + + + ++ V+ N ++ MI YAR G+++ A L N+M E+ D++++
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 177 NSMIAGYAQNGESLMAIK 194
I GY + G L A K
Sbjct: 789 KEFIYGYLKQGGVLEAFK 806
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVR 61
Q N V + ++ Y +SG L A + M + + ++ +++ G + E
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M G EP+ + +I LG E ++R++ H N T ++ +A
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLG 156
+ GN+ A + +++ G+ +S++ I Y + G
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 211/510 (41%), Gaps = 81/510 (15%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPER----SVVSWNAMLSGYAQSGAALETVRLF 63
+V +TT + + K G ++ A F KM E +VV++N ++ G G E
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 64 NDMLSSGNEPDETTW---VTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMH 120
M+ G EP T+ V ++ +GD A +++++ K F N V L+D
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGD---AYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 121 AKCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMP----ERDT 173
+ G+L A EI D + G+ S + N +I Y + G A L +M +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 174 VSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGH-LGSLSLGIWAV 232
S+ S+I + A++ EM+ N S L + C H S +L +W
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELW-F 494
Query: 233 SILNE-------------------------YQIKLSILG---------YNSLIFMYSRCG 258
LN+ ++I+ ILG YN+LI CG
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI--SGCCG 552
Query: 259 S--MEEATLIFQEMATRDL----VSYNTLISGLASHGHGIECIKLISKMKEDGIEPDRIT 312
++EA + EM R L +Y+ LI GL + E I+ K +G+ PD T
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYT 612
Query: 313 YIGILTACSHAGLLEEGQKVFESIKV----PDVDHYACMIDMLGRVGKLEEAMKLIHSMP 368
Y ++ C A EEGQ+ F+ + P+ Y +I R G+L A++L M
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMK 672
Query: 369 ---MEPHAGIYGSLLNATRIHKQVELGEL--AAAKLFTVEPHNSSNYVLLSNIYALAGRW 423
+ P++ Y SL+ I +VE +L ++ +EP N +Y L + Y G+
Sbjct: 673 HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGY---GKL 728
Query: 424 KEVGNVRNIMRKQGVKKITAWSWVEHPSHV 453
++ V ++R+ K + HP+ +
Sbjct: 729 GQMVKVECLLREMHSKNV-------HPNKI 751
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 164/354 (46%), Gaps = 26/354 (7%)
Query: 13 TTMVTGYAKSG-NLKTARIYFDKMPERSVV---SWNAMLSGYAQSGAALETVRLFNDMLS 68
TT+++G K G + K ++F + + VV + NA+L G ++G E R+ ++L
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 69 SGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVK--FHSNYFVKTALLDMHAKCGNL 126
G D ++ T+IS C G L E+ + + VK + + + L+ +
Sbjct: 534 RGCVMDRVSYNTLISGCC--GKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 127 KAAQEIFDQL-------GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPERDTVSWNSM 179
+ A + +D VY SV + A F ++ +K + +TV +N +
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHL 651
Query: 180 IAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSILNEYQ 239
I Y ++G MA++L ++M S P+ T S+ + + +
Sbjct: 652 IRAYCRSGRLSMALELREDMKHKGIS-PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 240 IKLSILGYNSLIFMYSRCGSMEEATLIFQEMATRDL----VSYNTLISGLASHGHGIECI 295
++ ++ Y +LI Y + G M + + +EM ++++ ++Y +I G A G+ E
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 296 KLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIKVPDVDHYACMID 349
+L+++M+E GI PD ITY + G L++G V E+ K D ++YA +I+
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIY-----GYLKQGG-VLEAFKGSDEENYAAIIE 818
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 11/198 (5%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVRLF 63
+V T++ M+ G K+ + + +FD+M ++V V +N ++ Y +SG + L
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
DM G P+ T+ ++I S + A+ + ++ N F TAL+D + K
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKL 728
Query: 124 GNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----DTVSW 176
G + + + ++ V+ N ++ MI YAR G+++ A L N+M E+ D++++
Sbjct: 729 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Query: 177 NSMIAGYAQNGESLMAIK 194
I GY + G L A K
Sbjct: 789 KEFIYGYLKQGGVLEAFK 806
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 7/158 (4%)
Query: 6 QRNVVTWTTMVTGYAKSGNLKTARIYFDKMPERSV----VSWNAMLSGYAQSGAALETVR 61
Q N V + ++ Y +SG L A + M + + ++ +++ G + E
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 62 LFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHA 121
LF +M G EP+ + +I LG E ++R++ H N T ++ +A
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 122 KCGNLKAAQEIFDQL---GVYRNSVSCNAMISAYARLG 156
+ GN+ A + +++ G+ +S++ I Y + G
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 173/399 (43%), Gaps = 26/399 (6%)
Query: 8 NVVTWTTMVTGYAKSGNLKTARIYFDKMPERSVVS----WNAMLSGYAQSGAALETVRLF 63
+ +T++ +++ Y K G +A FD+M + + + +L Y + G + + LF
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 64 NDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTALLDMHAKC 123
+M +G P T+ +I G A + + + + L+++ K
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 124 GNLKAAQEIFDQLGVYRNS---VSCNAMISA-YARLGDLSFARDLFNKMPERDTVS---- 175
G ++ +F ++G++R + VS N +I A + +S F+KM + D+VS
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKM-KADSVSPSEF 410
Query: 176 -WNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWAVSI 234
++ +I GY + A+ L +EM P S+ +A G
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEM-DEKGFPPCPAAYCSLINALGKAKRYEAANELFKE 469
Query: 235 LNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEMATR----DLVSYNTLISGLASHGH 290
L E +S Y +I + +CG + EA +F EM + D+ +YN L+SG+ G
Sbjct: 470 LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGM 529
Query: 291 GIECIKLISKMKEDGIEPDRITYIGILTACSHAGLLEEGQKVFESIK----VPDVDHYAC 346
E L+ KM+E+G D ++ IL + G+ ++FE+IK PD Y
Sbjct: 530 INEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNT 589
Query: 347 MIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNA 382
++ G EEA +++ M E A Y S+L+A
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 163/403 (40%), Gaps = 51/403 (12%)
Query: 57 LETVRLFNDMLSSGNEPDETTWVTVISSCSSLGDPCLAESIVRKLDKVKFHSNYFVKTAL 116
LE RL+ +M + E T+V+V P + +V+ L + K S K
Sbjct: 136 LEEARLYGEMYRTIQEVVRNTYVSV--------SPAVLSELVKALGRAKMVS----KALS 183
Query: 117 LDMHAKCGNLKAAQEIFDQLGVYRNSVSCNAMISAYARLGDLSFARDLFNKMPER----- 171
+ AK K + N++I + G +++ +M
Sbjct: 184 VFYQAKGRKCKPTSSTY------------NSVILMLMQEGQHEKVHEVYTEMCNEGDCFP 231
Query: 172 DTVSWNSMIAGYAQNGESLMAIKLFKEMISTNDSKPDELTMVSVFSACGHLGSLSLGIWA 231
DT++++++I+ Y + G + AI+LF EM N +P E ++ +G + +
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEM-KDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 232 VSILNEYQIKLSILGYNSLIFMYSRCGSMEEATLIFQEM----ATRDLVSYNTLISGLAS 287
+ ++ Y LI + G ++EA +++M T D+V N L++ L
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 288 HGHGIECIKLISKMKEDGIEPDRITYIGILTACSHA-GLLEEGQKVFESIKV----PDVD 342
G E + S+M P ++Y ++ A + + E F+ +K P
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 343 HYACMIDMLGRVGKLEEAMKLIHSMP---MEPHAGIYGSLLNATRIHKQVELGELAAAKL 399
Y+ +ID + ++E+A+ L+ M P Y SL+NA K+ E AA +L
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE----AANEL 466
Query: 400 FTVEPHNSSN-----YVLLSNIYALAGRWKEVGNVRNIMRKQG 437
F N N Y ++ + G+ E ++ N M+ QG
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQG 509