Miyakogusa Predicted Gene

Lj0g3v0022809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0022809.1 Non Chatacterized Hit- tr|K4AJV4|K4AJV4_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,38.56,8e-17,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.1287.1
         (161 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05390.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...    60   9e-10
AT5G40830.2 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    53   8e-08
AT5G40830.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    53   8e-08
AT3G27230.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...    50   6e-07

>AT3G05390.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           mitochondrion; EXPRESSED IN: 15 plant structures;
           EXPRESSED DURING: 7 growth stages; CONTAINS InterPro
           DOMAIN/s: Protein of unknown function DUF248,
           methyltransferase putative (InterPro:IPR004159); BEST
           Arabidopsis thaliana protein match is:
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein (TAIR:AT4G01240.1); Has 507 Blast
           hits to 498 proteins in 33 species: Archae - 4; Bacteria
           - 8; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0;
           Other Eukaryotes - 2 (source: NCBI BLink). |
           chr3:1546585-1547976 REVERSE LENGTH=463
          Length = 463

 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 77  DAAANSGEDEEAPLPPEFLAATSAQKLPLGPNR-----NFDSDTVHAPAGAACTLFPDDL 131
           +   NS E EE PL  +FL     Q +    NR      F ++ V+   G AC L   +L
Sbjct: 133 EGIRNSTEKEE-PLINKFLIEEIRQYITPKENRVGKINMFGTERVYNTIGHACALMKMEL 191

Query: 132 RRFMTYPINGSCPDDELLSQKLLLKGCDPL 161
            ++M Y +   C DD  L+QKL+L GCDPL
Sbjct: 192 EKYMDYDVGAYCDDDWNLAQKLMLNGCDPL 221


>AT5G40830.2 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:16354611-16355855 REVERSE LENGTH=414
          Length = 414

 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%)

Query: 87  EAPLPPEFLAATSAQKLPLGPNRNFDSDTVHAPAGAACTLFPDDLRRFMTYPINGSCPDD 146
           +  +P E        +LPLG +       + A  G +C +  D L ++M+Y +   CPDD
Sbjct: 99  QQEVPQELKLFLQQHQLPLGKDSRTGITQMVASVGHSCEMSLDLLSQYMSYNVFEKCPDD 158

Query: 147 ELLSQKLLLKGCDPL 161
             L+QKL+L+ C+PL
Sbjct: 159 WSLAQKLILRACEPL 173


>AT5G40830.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr5:16354611-16355855 REVERSE LENGTH=414
          Length = 414

 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 40/75 (53%)

Query: 87  EAPLPPEFLAATSAQKLPLGPNRNFDSDTVHAPAGAACTLFPDDLRRFMTYPINGSCPDD 146
           +  +P E        +LPLG +       + A  G +C +  D L ++M+Y +   CPDD
Sbjct: 99  QQEVPQELKLFLQQHQLPLGKDSRTGITQMVASVGHSCEMSLDLLSQYMSYNVFEKCPDD 158

Query: 147 ELLSQKLLLKGCDPL 161
             L+QKL+L+ C+PL
Sbjct: 159 WSLAQKLILRACEPL 173


>AT3G27230.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:10054224-10055456 FORWARD LENGTH=410
          Length = 410

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 37/72 (51%)

Query: 90  LPPEFLAATSAQKLPLGPNRNFDSDTVHAPAGAACTLFPDDLRRFMTYPINGSCPDDELL 149
           + PE        +LPLG +       + +  G +C    D L ++M+Y +   CPDD  L
Sbjct: 102 IVPELKLFLQRHQLPLGKDSRTGITEMVSSVGHSCGKSTDLLSQYMSYKVFDRCPDDWSL 161

Query: 150 SQKLLLKGCDPL 161
            QKL+L+ C+PL
Sbjct: 162 GQKLILRACEPL 173