Miyakogusa Predicted Gene
- Lj0g3v0020909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0020909.1 Non Chatacterized Hit- tr|I1KWB3|I1KWB3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48640
PE,81.56,0,seg,NULL; no description,Tetratricopeptide-like helical;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,,NODE_65576_length_2075_cov_13.164820.path1.1
(602 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 753 0.0
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 409 e-114
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 406 e-113
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 380 e-105
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 368 e-102
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 366 e-101
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 365 e-101
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 364 e-100
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 7e-99
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 354 9e-98
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 353 3e-97
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 350 2e-96
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 346 3e-95
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 345 4e-95
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 3e-94
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 340 2e-93
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 340 2e-93
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 338 9e-93
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 337 1e-92
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 336 3e-92
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 3e-92
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 5e-92
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 6e-92
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 329 3e-90
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 328 1e-89
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 327 1e-89
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 327 2e-89
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 3e-89
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 4e-89
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 4e-89
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 323 2e-88
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 3e-87
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 320 3e-87
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 4e-87
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 317 1e-86
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 314 9e-86
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 3e-85
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 6e-85
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 7e-85
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 309 3e-84
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 6e-84
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 6e-84
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 1e-83
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 306 4e-83
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 305 5e-83
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 6e-83
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 304 1e-82
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 2e-82
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 3e-82
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 302 4e-82
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 5e-82
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 301 6e-82
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 8e-82
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 301 9e-82
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 301 1e-81
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 1e-81
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 299 4e-81
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 297 2e-80
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 2e-80
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 5e-80
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 7e-80
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 295 7e-80
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 295 8e-80
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 8e-80
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 292 4e-79
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 8e-79
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 1e-78
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 290 3e-78
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 288 6e-78
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 7e-78
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 2e-77
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 5e-77
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 8e-77
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 284 1e-76
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 7e-76
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 1e-75
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 1e-75
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 1e-75
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 2e-74
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 275 7e-74
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 2e-73
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 7e-73
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 7e-73
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 6e-72
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 9e-72
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 3e-71
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 9e-71
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 4e-70
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 3e-69
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 6e-69
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 255 5e-68
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 254 1e-67
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 5e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 252 6e-67
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 251 1e-66
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 3e-66
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 249 5e-66
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 8e-66
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 3e-65
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 8e-65
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 243 2e-64
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 3e-64
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 5e-64
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 7e-63
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 228 1e-59
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 226 5e-59
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 5e-58
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 9e-55
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 210 3e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 3e-48
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 2e-45
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 144 2e-34
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 7e-34
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 136 4e-32
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 9e-31
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 8e-30
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 125 1e-28
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 3e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 4e-28
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 5e-28
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 6e-28
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 122 8e-28
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 1e-27
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 5e-27
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 117 3e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 116 4e-26
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 116 5e-26
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 115 7e-26
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 8e-26
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 4e-24
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 109 5e-24
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 107 2e-23
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 107 4e-23
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 106 4e-23
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 5e-23
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 103 3e-22
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 1e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 96 7e-20
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 8e-20
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 3e-19
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 93 6e-19
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 91 2e-18
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 88 2e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 87 4e-17
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 2e-16
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 80 4e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 78 1e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 78 2e-14
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 77 3e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 77 3e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 70 5e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 70 5e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 2e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 4e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 60 4e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 5e-09
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 56 6e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 51 2e-06
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/591 (59%), Positives = 453/591 (76%), Gaps = 4/591 (0%)
Query: 1 MQVSAGVRIPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAA 60
M S VR P+W S RR+ EE+L L +C+NL+ VKQ+HAQ+++ +LH+DL++APKLI+A
Sbjct: 1 MTSSLPVRAPSWVSSRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISA 60
Query: 61 FSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFT 120
SLCR + AV VFNQV PNVHL NSLIRAHA N S P F F MQR G++ DNFT
Sbjct: 61 LSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN-SQPYQAFFVFSEMQRFGLFADNFT 119
Query: 121 YPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSA 180
YPFLLKAC+G S LP+V+M+H H+EK G DI+VPN+LID YSRCGG+G+ AM+LF
Sbjct: 120 YPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEK 179
Query: 181 MEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELF 240
M ERD V+WNSM+GGLV+ G+L A +LFDEMP+RD++SWNTMLDGYA+ EM+KAFELF
Sbjct: 180 MSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELF 239
Query: 241 DRMLQWNIISWSTMVCGYSRAGDMDMARMLFDK--CPEKNLVLWTTIISGYAEKGFMKEA 298
++M + N +SWSTMV GYS+AGDM+MAR++FDK P KN+V WT II+GYAEKG +KEA
Sbjct: 240 EKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEA 299
Query: 299 TVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDM 358
L D+M +GLK D +ISIL AC ESG+L LG +IH+ ++R + VLNA +DM
Sbjct: 300 DRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDM 359
Query: 359 YAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
YAKCG L AF +F+ + KKDLVSWN+M+HG GVHG G++A+ELFS M EG PDK T
Sbjct: 360 YAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
FI +LC+C HAGL+D+G +YF SMEKVY +VPQ+EHYGC++DLL R G L+EA +++++M
Sbjct: 419 FIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Query: 479 PVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVA 538
P+EPN ++ G LLGACRMHN+V++A+ + ++L KL P DPGN+SLLSNIYA A DW VA
Sbjct: 479 PMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVA 538
Query: 539 SVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVH 589
+R +MK+ G +KPSGASS+ FTVFD SHPKSD IYQM+G L+
Sbjct: 539 DIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 409 bits (1050), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/620 (35%), Positives = 344/620 (55%), Gaps = 47/620 (7%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKL--IAAFSLCRHISSAVNVFNQVPYPNVH 83
+ RC +L +KQ H +++ D Y A KL +AA S + A VF+++P PN
Sbjct: 37 IERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
+N+LIRA+A +G P L+ F M E YP+ +T+PFL+KA SSL L Q +H
Sbjct: 97 AWNTLIRAYA-SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHG 155
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
K D+FV NSLI Y CG +D A ++F+ ++E+D V+WNSMI G V+ G
Sbjct: 156 MAVKSAVGSDVFVANSLIHCYFSCG--DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 203 DGAFKLFDEMPERDMVS---------------------------------------WNTM 223
D A +LF +M D+ + N M
Sbjct: 214 DKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAM 273
Query: 224 LDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWT 283
LD Y K G + A LFD M + + ++W+TM+ GY+ + D + AR + + P+K++V W
Sbjct: 274 LDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWN 333
Query: 284 TIISGYAEKGFMKEATVLYDKME-EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR 342
+IS Y + G EA +++ +++ + +K + L+S L+ACA+ G L LG+ IH+ +++
Sbjct: 334 ALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK 393
Query: 343 CRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALE 402
R + V +A I MY+KCG L+ + +F+ + K+D+ W++MI G +HG G +A++
Sbjct: 394 HGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 403 LFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLL 462
+F M +P+ TF + CAC+H GLVD+ + F+ ME YGIVP+ +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 463 SRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFS 522
R G+LE+A + + +MP+ P+ V G LLGAC++H ++ LA L +L P + G
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 523 LLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQ 582
LLSNIYA+ G W NV+ +R M+ G +K G SSI F D++HP S+ +Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 583 MIGRLVHDLRQVGYVPGIYQ 602
+ ++ L+ GY P I Q
Sbjct: 633 KLHEVMEKLKSNGYEPEISQ 652
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 406 bits (1043), Expect = e-113, Method: Compositional matrix adjust.
Identities = 229/621 (36%), Positives = 349/621 (56%), Gaps = 50/621 (8%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISS---AVNVFNQVPY 79
L LH C L ++ IHAQ++K LH Y KLI L H A++VF +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
PN+ ++N++ R HAL+ S P + M G+ P+++T+PF+LK+C + Q
Sbjct: 97 PNLLIWNTMFRGHALS-SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
IH HV K G D++V SLI Y + G ++ A ++F RD V++ ++I G
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGR--LEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 200 GDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI-ISWSTMV--- 255
G ++ A KLFDE+P +D+VSWN M+ GYA+ G +A ELF M++ N+ STMV
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273
Query: 256 --CG---------------------------------YSRAGDMDMARMLFDKCPEKNLV 280
C YS+ G+++ A LF++ P K+++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
W T+I GY KEA +L+ +M +G P+D ++SIL ACA G + +G+ IH +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 341 QRCRFRCSTK---VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQG 397
+ R + T + + IDMYAKCG ++AA +F+ + K L SWN+MI GF +HG+
Sbjct: 394 DK-RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL-HKSLSSWNAMIFGFAMHGRA 451
Query: 398 EKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC 457
+ + +LFS M G +PD TF+GLL AC+H+G++D GR+ F +M + Y + P++EHYGC
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 511
Query: 458 MIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSD 517
MIDLL G +EA E++ M +EP+ ++ +LL AC+MH +VEL + +E+L K+ P +
Sbjct: 512 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 571
Query: 518 PGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKS 577
PG++ LLSNIYA AG W VA R + + G +K G SSI F + D HP++
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 631
Query: 578 DDIYQMIGRLVHDLRQVGYVP 598
+IY M+ + L + G+VP
Sbjct: 632 REIYGMLEEMEVLLEKAGFVP 652
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 325/559 (58%), Gaps = 10/559 (1%)
Query: 42 LLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY-PNVHLYNSLIRAHALNGSHPS 100
+L+ + ++ + K + + I A +F+Q P + L NS+I+A+ +P
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 101 LTFSTFFHMQREGVY-PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSL 159
+F+ + +++E + PDNFT+ L K+C+ + +H+ + +FGF D++V +
Sbjct: 61 -SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 160 IDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE-RDMV 218
+D Y++ G +G A F M R V+W ++I G +R G+LD A KLFD+MP +D+V
Sbjct: 120 VDMYAKFGKMGC--ARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVV 177
Query: 219 SWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKN 278
+N M+DG+ K+G+M A LFD M +I+W+TM+ GY D+D AR LFD PE+N
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERN 237
Query: 279 LVLWTTIISGYAEKGFMKEATVLYDKME-EAGLKPDDGVLISILTACAESGMLGLGKKIH 337
LV W T+I GY + +E L+ +M+ L PDD ++S+L A +++G L LG+ H
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 338 ASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQG 397
VQR + KV A +DMY+KCG ++ A IF +M +K + SWN+MIHG+ ++G
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNA 356
Query: 398 EKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC 457
AL+LF +M+ E +PD+ T + ++ AC H GLV++GR +F+ M ++ G+ +IEHYGC
Sbjct: 357 RAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGC 414
Query: 458 MIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSD 517
M+DLL R G L+EA +L+ +MP EPN I++ + L AC + D+E A + + +L P +
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQN 474
Query: 518 PGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKS 577
GN+ LL N+YA W + V+ M+ +K G S I F D +HP
Sbjct: 475 DGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHR 534
Query: 578 DDIYQMIGRLVHDLRQVGY 596
I+ ++G L+ + + Y
Sbjct: 535 RSIHLVLGDLLMHMNEEKY 553
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 186/453 (41%), Gaps = 93/453 (20%)
Query: 7 VRIPTWFSPRRLLEEKL---CTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSL 63
+R T F+P L C+L C L Q+H+Q+ + D+YV+ ++ ++
Sbjct: 68 LRKETCFAPDNFTFTTLTKSCSLSMCVYQGL--QLHSQIWRFGFCADMYVSTGVVDMYAK 125
Query: 64 CRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPF 123
+ A N F+++P+ + + +LI + G
Sbjct: 126 FGKMGCARNAFDEMPHRSEVSWTALISGYIRCGE-------------------------- 159
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE 183
+S QM H +D+ + N+++D + + G + A RLF M
Sbjct: 160 -----LDLASKLFDQMPHV--------KDVVIYNAMMDGFVKSG--DMTSARRLFDEMTH 204
Query: 184 RDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM 243
+ +TW +MI G D+D A KLFD MPER++VSWNTM+ GY + + + LF M
Sbjct: 205 KTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEM 264
Query: 244 -----------------------------------LQWNIISWSTMVCG-----YSRAGD 263
+Q + VC YS+ G+
Sbjct: 265 QATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGE 324
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM--EEAGLKPDDGVLISIL 321
++ A+ +FD+ PEK + W +I GYA G + A L+ M EE KPD+ +++++
Sbjct: 325 IEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE---KPDEITMLAVI 381
Query: 322 TACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDL 381
TAC G++ G+K ++ + +D+ + G L A + + M + +
Sbjct: 382 TACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNG 441
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEP 414
+ +S + G + E+A + V EP
Sbjct: 442 IILSSFLSACGQYKDIERAERILKKAVE--LEP 472
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/588 (35%), Positives = 324/588 (55%), Gaps = 35/588 (5%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
++ +L +DL +I + R++ A +F +P +V +N+++ +A NG
Sbjct: 112 ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF--------- 147
S F M + ++ ++ LL A S + M+ E +
Sbjct: 172 CVDDAR-SVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLL 226
Query: 148 -GFYE-----------------DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTW 189
GF + D+ N++I Y++ G ID A +LF +D TW
Sbjct: 227 GGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK--IDEARQLFDESPVQDVFTW 284
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNII 249
+M+ G ++ ++ A +LFD+MPER+ VSWN ML GY + M A ELFD M N+
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS 344
Query: 250 SWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
+W+TM+ GY++ G + A+ LFDK P+++ V W +I+GY++ G EA L+ +ME G
Sbjct: 345 TWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
+ + S L+ CA+ L LGK++H + + + V NA + MY KCG ++ A
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAN 464
Query: 370 GIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHA 429
+F +M GK D+VSWN+MI G+ HG GE AL F SM EG +PD T + +L AC+H
Sbjct: 465 DLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 430 GLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGT 489
GLVDKGR YF +M + YG++P +HY CM+DLL R G LE+A L+++MP EP+A + GT
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 490 LLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGG 549
LLGA R+H + ELA ++ +F + P + G + LLSN+YA +G W +V +R++M++ G
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 550 QKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYV 597
+K G S I F+V D HP+ D+I+ + L +++ GYV
Sbjct: 644 KKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 240/509 (47%), Gaps = 37/509 (7%)
Query: 25 TLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHL 84
+L R + + K LLK D+ I+++ + A+ VF ++P +
Sbjct: 39 SLKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVS 97
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
YN +I + NG L F M D ++ ++K +L + + +
Sbjct: 98 YNGMISGYLRNGEF-ELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIM 152
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDG 204
+ D+ N+++ Y++ G V D A +F M E++ V+WN+++ V+ ++
Sbjct: 153 PE----RDVCSWNTMLSGYAQNGCV--DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE 206
Query: 205 AFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDM 264
A LF +VSWN +L G+ K ++ +A + FD M +++SW+T++ GY+++G +
Sbjct: 207 ACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKI 266
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
D AR LFD+ P +++ WT ++SGY + ++EA L+DKM E ++ ++L
Sbjct: 267 DEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE----RNEVSWNAMLAGY 322
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
+ + + K++ V CR + N I YA+CG + A +F KM K+D VSW
Sbjct: 323 VQGERMEMAKELF-DVMPCR---NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSW 377
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
+MI G+ G +AL LF M EG ++ +F L C ++ G+ +
Sbjct: 378 AAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGK-------Q 430
Query: 445 VYG-IVPQIEHYGCMID-----LLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
++G +V GC + + + G +EEA +L + M + + + T++ H
Sbjct: 431 LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHG 489
Query: 499 DVELARALSEHLFK--LVPSDPGNFSLLS 525
E+A E + + L P D ++LS
Sbjct: 490 FGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 175/366 (47%), Gaps = 22/366 (6%)
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML 244
D WN I +R G + A ++F MP VS+N M+ GY + GE A +LFD M
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
+ +++SW+ M+ GY R ++ AR LF+ PE+++ W T++SGYA+ G + +A ++D+
Sbjct: 123 ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDR 182
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
M E +D ++L+A ++ + + S R + N + + K
Sbjct: 183 MPE----KNDVSWNALLSAYVQNSKMEEACMLFKS----RENWALVSWNCLLGGFVKKKK 234
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
+ A F M +D+VSWN++I G+ G+ ++A +LF E D +T+ ++
Sbjct: 235 IVEARQFFDSMN-VRDVVSWNTIITGYAQSGKIDEARQLFD----ESPVQDVFTWTAMVS 289
Query: 425 ACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNA 484
+V++ R F+ M + + + M+ +G +E A EL MP N
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEV-----SWNAMLAGYVQGERMEMAKELFDVMPCR-NV 343
Query: 485 IVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQM 544
T++ + A+ L + K+ DP +++ + Y+Q+G + +QM
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFD---KMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 545 KNAGGQ 550
+ GG+
Sbjct: 401 EREGGR 406
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/559 (37%), Positives = 305/559 (54%), Gaps = 45/559 (8%)
Query: 27 HRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLI--AAFSLCRHISSAVNVFNQVPYPNVHL 84
C N+ +KQIHA ++ L +L V +LI A+ S+ + A +F+++P P+V +
Sbjct: 20 QNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSI 79
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
N ++R A P T S + M++ GV PD +T+ F+LKAC+ H V
Sbjct: 80 CNHVLRGSA-QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDG 204
+ GF + +V N+LI ++ CG +GI A LF + V W+SM G + G +D
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGI--ASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 205 AFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDM 264
A +LFDEMP +D V+WN M+ G K EM+ A ELFDR + ++++W+ M
Sbjct: 197 AMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAM---------- 246
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
ISGY G+ KEA ++ +M +AG PD ++S+L+AC
Sbjct: 247 ---------------------ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 325 AESGMLGLGKKIH------ASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
A G L GK++H ASV + T + NA IDMYAKCG +D A +F +
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIY-VGTPIWNALIDMYAKCGSIDRAIEVF-RGVKD 343
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY 438
+DL +WN++I G +H E ++E+F M P++ TFIG++ AC+H+G VD+GR Y
Sbjct: 344 RDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKY 402
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
F+ M +Y I P I+HYGCM+D+L R G LEEAF + SM +EPNAIV TLLGAC+++
Sbjct: 403 FSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYG 462
Query: 499 DVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
+VEL + +E L + + G++ LLSNIYA G W V VR + +KP+G S I
Sbjct: 463 NVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLI 522
Query: 559 XXXXXXXXFTVFDHSHPKS 577
S P+S
Sbjct: 523 EEDDDKLMMRYLLSSEPES 541
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 368 bits (945), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/576 (35%), Positives = 334/576 (57%), Gaps = 21/576 (3%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
+KQIHA+LL L ++ KLI A S I+ A VF+ +P P + +N++IR ++
Sbjct: 37 LKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSR 96
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
N +H + +MQ V PD+FT+P LLKAC+G S L + + +HA V + GF D+F
Sbjct: 97 N-NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAME--ERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
V N LI Y++C +G A +F + ER V+W +++ + G+ A ++F +M
Sbjct: 156 VQNGLIALYAKCRRLG--SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 213 PERDM----VSWNTMLDGYAKAGEMNKAFELFDRMLQWNI-------ISWSTMVCGYSRA 261
+ D+ V+ ++L+ + ++ + + +++ + IS +TM Y++
Sbjct: 214 RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTM---YAKC 270
Query: 262 GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL 321
G + A++LFDK NL+LW +ISGYA+ G+ +EA ++ +M ++PD + S +
Sbjct: 271 GQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAI 330
Query: 322 TACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDL 381
+ACA+ G L + ++ V R +R + +A IDM+AKCG ++ A +F + T +D+
Sbjct: 331 SACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR-TLDRDV 389
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNS 441
V W++MI G+G+HG+ +A+ L+ +M G P+ TF+GLL AC H+G+V +G +FN
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNR 449
Query: 442 MEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVE 501
M + I PQ +HY C+IDLL R GHL++A+E+++ MPV+P V G LL AC+ H VE
Sbjct: 450 MAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Query: 502 LARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXX 561
L ++ LF + PS+ G++ LSN+YA A W VA VR++MK G K G S +
Sbjct: 509 LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVR 568
Query: 562 XXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYV 597
F V D SHP+ ++I + + + L++ G+V
Sbjct: 569 GRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 188/390 (48%), Gaps = 17/390 (4%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHL--YNS 87
S+L + + +HAQ+ + D++V LIA ++ CR + SA VF +P P + + +
Sbjct: 133 SHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTA 192
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
++ A+A NG P F M++ V PD +L A T L + IHA V K
Sbjct: 193 IVSAYAQNGE-PMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKM 251
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
G + + SL Y++CG V A LF M+ + + WN+MI G + G A
Sbjct: 252 GLEIEPDLLISLNTMYAKCGQVAT--AKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 208 LFDEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYS 259
+F EM +D+ +S + + A+ G + +A +++ + + ++ S ++ ++
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
+ G ++ AR++FD+ ++++V+W+ +I GY G +EA LY ME G+ P+D +
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 320 ILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK 379
+L AC SGM+ G + + + ID+ + G LD A+ + M +
Sbjct: 430 LLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQP 489
Query: 380 DLVSWNSMIHGFGVHGQGE----KALELFS 405
+ W +++ H E A +LFS
Sbjct: 490 GVTVWGALLSACKKHRHVELGEYAAQQLFS 519
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/582 (34%), Positives = 318/582 (54%), Gaps = 38/582 (6%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLI--AAFSLCRHISSAVNVFNQVPYP 80
L L+ C NL + QIH +K + D Y KLI A S+ + A + P P
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEP 68
Query: 81 NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLPLVQM 139
+ ++N+L+R ++ P + + F M R+G V+PD+F++ F++KA SL
Sbjct: 69 DAFMFNTLVRGYS-ESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
+H K G +FV +LI Y CG V
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCV------------------------------ 157
Query: 200 GDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYS 259
+ A K+FDEM + ++V+WN ++ + ++ A E+FD+ML N SW+ M+ GY
Sbjct: 158 ---EFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYI 214
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
+AG+++ A+ +F + P ++ V W+T+I G A G E+ + + +++ AG+ P++ L
Sbjct: 215 KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 320 ILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK 379
+L+AC++SG GK +H V++ + V NA IDMY++CG + A +F M K+
Sbjct: 275 VLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKR 334
Query: 380 DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYF 439
+VSW SMI G +HGQGE+A+ LF+ M G PD +FI LL AC+HAGL+++G +YF
Sbjct: 335 CIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYF 394
Query: 440 NSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHND 499
+ M++VY I P+IEHYGCM+DL R G L++A++ + MP+ P AIV TLLGAC H +
Sbjct: 395 SEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN 454
Query: 500 VELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIX 559
+ELA + + L +L P++ G+ LLSN YA AG W +VAS+R M +K + S +
Sbjct: 455 IELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVE 514
Query: 560 XXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLR-QVGYVPGI 600
FT + + ++ + ++ L+ + GY P +
Sbjct: 515 VGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEV 556
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/634 (31%), Positives = 334/634 (52%), Gaps = 79/634 (12%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI----- 89
V+ +HA ++K+ ++++ +LI A+S C + VF+++P N++ +NS++
Sbjct: 39 VRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK 98
Query: 90 -----RAHALNGSHPSLTFST--------------------FFHMQREGVYPDNFTYPFL 124
A +L S P T F M +EG + +++ +
Sbjct: 99 LGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASV 158
Query: 125 LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER 184
L AC+G + + +H+ + K F D+++ ++L+D YS+CG V + A R+F M +R
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNV--NDAQRVFDEMGDR 216
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEMPE------------------------------ 214
+ V+WNS+I + G A +F M E
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 215 ----------RDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDM 264
D++ N +D YAK + +A +FD M N+I+ ++M+ GY+ A
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
AR++F K E+N+V W +I+GY + G +EA L+ ++ + P +IL AC
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTK------VLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
A+ L LG + H V + F+ + V N+ IDMY KCGC++ + +F KM +
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM-E 455
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY 438
+D VSWN+MI GF +G G +ALELF M+ G +PD T IG+L AC HAG V++GR+Y
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
F+SM + +G+ P +HY CM+DLL R G LEEA ++ MP++P++++ G+LL AC++H
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHR 575
Query: 499 DVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
++ L + ++E L ++ PS+ G + LLSN+YA+ G W +V +VR M+ G K G S I
Sbjct: 576 NITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWI 635
Query: 559 XXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLR 592
F V D SHP+ I+ ++ L+ ++R
Sbjct: 636 KIQGHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 216/454 (47%), Gaps = 82/454 (18%)
Query: 115 YPDNFTYPFLLKACTGPS-SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDG 173
+ D+ + LL +C S V+ +HA V K GF +IF+ N LID+YS+CG ++
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGS--LED 73
Query: 174 AMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAK---- 229
++F M +R+ TWNS++ GL + G LD A LF MPERD +WN+M+ G+A+
Sbjct: 74 GRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 230 -------------------------------AGEMNKAFELFDRMLQWNIIS----WSTM 254
+MNK ++ + + +S S +
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL 193
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
V YS+ G+++ A+ +FD+ ++N+V W ++I+ + + G EA ++ M E+ ++PD+
Sbjct: 194 VDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDE 253
Query: 315 GVLISILTACAESGMLGLGKKIHAS-VQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFS 373
L S+++ACA + +G+++H V+ + R + NAF+DMYAKC + A IF
Sbjct: 254 VTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFD 313
Query: 374 KM------------------------------TGKKDLVSWNSMIHGFGVHGQGEKALEL 403
M ++++VSWN++I G+ +G+ E+AL L
Sbjct: 314 SMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSL 373
Query: 404 FSSMVHEGFEPDKYTFIGLLCACT-----HAGLVDKGRNYFNSMEKVYGIVPQIEHYGCM 458
F + E P Y+F +L AC H G+ + + G I +
Sbjct: 374 FCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSL 433
Query: 459 IDLLSRGGHLEEAFELLRSM----PVEPNAIVVG 488
ID+ + G +EE + + R M V NA+++G
Sbjct: 434 IDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIG 467
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/575 (34%), Positives = 310/575 (53%), Gaps = 43/575 (7%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
++ ++ +H++++ L + + KL+ A++ + ++SA VF+++P NV + N +IR
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 91 AHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY 150
++ NG + F M V PD++T+P +LKAC+ ++ + + IH K G
Sbjct: 114 SYVNNGFYGE-GVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
+FV N L+ Y +CG L A + D
Sbjct: 173 STLFVGNGLVSMYGKCGF---------------------------------LSEARLVLD 199
Query: 211 EMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI-------ISWSTMVCGYSRAGD 263
EM RD+VSWN+++ GYA+ + A E+ M I S V +
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
M + M F K +K+LV W +I Y + EA LY +ME G +PD + S+L A
Sbjct: 260 MYVKDMFF-KMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
C ++ L LGKKIH ++R + + + NA IDMYAKCGCL+ A +F M + D+VS
Sbjct: 319 CGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVVS 377
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
W +MI +G G+G A+ LFS + G PD F+ L AC+HAGL+++GR+ F M
Sbjct: 378 WTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMT 437
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
Y I P++EH CM+DLL R G ++EA+ ++ M +EPN V G LLGACR+H+D ++
Sbjct: 438 DHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIG 497
Query: 504 RALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXX 563
++ LF+L P G + LLSNIYA+AG W V ++R MK+ G +K GAS++
Sbjct: 498 LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRI 557
Query: 564 XXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F V D SHP+SD+IY+ + LV ++++GYVP
Sbjct: 558 IHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVP 592
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/533 (37%), Positives = 318/533 (59%), Gaps = 7/533 (1%)
Query: 29 CSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVN-VFNQVPYPNVHLYNS 87
C + + QIHA++++ L QD + I++ S S + VF +VP P +L+N
Sbjct: 20 CKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNH 79
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGV-YPDNFTYPFLLKACTGPSSLPLVQMIHAHVEK 146
LI+ ++ N T S M R G+ PD +T+P ++K C+ + + +H V +
Sbjct: 80 LIKGYS-NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLR 138
Query: 147 FGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAF 206
GF +D+ V S +D Y +C + A ++F M ER+AV+W +++ V+ G+L+ A
Sbjct: 139 IGFDKDVVVGTSFVDFYGKCKD--LFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAK 196
Query: 207 KLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDM 266
+FD MPER++ SWN ++DG K+G++ A +LFD M + +IIS+++M+ GY++ GDM
Sbjct: 197 SMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVS 256
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
AR LF++ ++ W+ +I GYA+ G EA ++ +M +KPD+ +++ +++AC++
Sbjct: 257 ARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQ 316
Query: 327 SGMLGLGKKIHASV-QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
G L +K+ + + QR S V+ A IDM AKCG +D A +F +M ++DLVS+
Sbjct: 317 MGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMP-QRDLVSYC 375
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
SM+ G +HG G +A+ LF MV EG PD+ F +L C + LV++G YF M K
Sbjct: 376 SMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKK 435
Query: 446 YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARA 505
Y I+ +HY C+++LLSR G L+EA+EL++SMP E +A G+LLG C +H + E+A
Sbjct: 436 YSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEV 495
Query: 506 LSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
++ HLF+L P G++ LLSNIYA W +VA +R +M G K G S I
Sbjct: 496 VARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/610 (34%), Positives = 329/610 (53%), Gaps = 44/610 (7%)
Query: 29 CSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHL-YNS 87
C +L+ +KQ+HA +L+ ++ L ++ S ++S A+NVF+ +P P + +N
Sbjct: 22 CKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNP 81
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
+R + S P T + ++ G D F++ +LKA + S+L +H K
Sbjct: 82 FLRDLS-RSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKI 140
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
D FV +D Y+ CG I+ A +F M RD VTWN+MI R G +D AFK
Sbjct: 141 ATLCDPFVETGFMDMYASCGR--INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFK 198
Query: 208 LFDEMPER-----DMVSWN----------------------------------TMLDGYA 228
LF+EM + +M+ N ++ YA
Sbjct: 199 LFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYA 258
Query: 229 KAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISG 288
AG M+ A E F +M N+ + MV GYS+ G +D A+++FD+ +K+LV WTT+IS
Sbjct: 259 GAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISA 318
Query: 289 YAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCS 348
Y E + +EA ++++M +G+KPD + S+++ACA G+L K +H+ +
Sbjct: 319 YVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESE 378
Query: 349 TKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMV 408
+ NA I+MYAKCG LDA +F KM ++++VSW+SMI+ +HG+ AL LF+ M
Sbjct: 379 LSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMK 437
Query: 409 HEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHL 468
E EP++ TF+G+L C+H+GLV++G+ F SM Y I P++EHYGCM+DL R L
Sbjct: 438 QENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLL 497
Query: 469 EEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIY 528
EA E++ SMPV N ++ G+L+ ACR+H ++EL + ++ + +L P G L+SNIY
Sbjct: 498 REALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIY 557
Query: 529 AQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLV 588
A+ W +V ++R M+ K G S I F + D H +S++IY + +V
Sbjct: 558 AREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVV 617
Query: 589 HDLRQVGYVP 598
L+ GYVP
Sbjct: 618 SKLKLAGYVP 627
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 358 bits (919), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 200/616 (32%), Positives = 327/616 (53%), Gaps = 54/616 (8%)
Query: 29 CSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAF--SLCRHISSAVNVFNQVPYPNVHLYN 86
C D KQ+H+Q + + + KL + L H+S A +F ++P P+V ++N
Sbjct: 44 CKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWN 103
Query: 87 SLIRAHA---LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS-SLPLVQMIHA 142
++I+ + +G L + +M +EGV PD+ T+PFLL +L + +H
Sbjct: 104 NMIKGWSKVDCDGEGVRL----YLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
HV KFG +++V N+L+ YS CG +D A +F + D +WN MI G R +
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLCGL--MDMARGVFDRRCKEDVFSWNLMISGYNRMKEY 217
Query: 203 DGAFKLFDEMPERDMVS----------------------------------------WNT 222
+ + +L EM ER++VS N
Sbjct: 218 EESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENA 276
Query: 223 MLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLW 282
+++ YA GEM+ A +F M ++ISW+++V GY G++ +AR FD+ P ++ + W
Sbjct: 277 LVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISW 336
Query: 283 TTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR 342
T +I GY G E+ ++ +M+ AG+ PD+ ++S+LTACA G L +G+ I + +
Sbjct: 337 TIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDK 396
Query: 343 CRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALE 402
+ + V NA IDMY KCGC + A +F M ++D +W +M+ G +GQG++A++
Sbjct: 397 NKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMD-QRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 403 LFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLL 462
+F M +PD T++G+L AC H+G+VD+ R +F M + I P + HYGCM+D+L
Sbjct: 456 VFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDML 515
Query: 463 SRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFS 522
R G ++EA+E+LR MP+ PN+IV G LLGA R+HND +A ++ + +L P + ++
Sbjct: 516 GRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYA 575
Query: 523 LLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQ 582
LL NIYA W ++ VR ++ + +K G S I F D SH +S++IY
Sbjct: 576 LLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYM 635
Query: 583 MIGRLVHDLRQVGYVP 598
+ L + Y+P
Sbjct: 636 KLEELAQESTFAAYLP 651
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 151/342 (44%), Gaps = 47/342 (13%)
Query: 23 LCTLHRCSNL---DLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY 79
L L CS + DL K++H + + L + L+ A++ C + AV +F +
Sbjct: 240 LLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA 299
Query: 80 PNVHLYNSLIRAHALNGSHP------------------------------SLTFSTFFHM 109
+V + S+++ + G+ + + F M
Sbjct: 300 RDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREM 359
Query: 110 QREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV 169
Q G+ PD FT +L AC SL + + I +++K D+ V N+LID Y +CG
Sbjct: 360 QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCS 419
Query: 170 GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLD 225
+ A ++F M++RD TW +M+ GL G A K+F +M + D +++ +L
Sbjct: 420 --EKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Query: 226 GYAKAGEMNKAFELFDRM-----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCP-EKNL 279
+G +++A + F +M ++ +++ + MV RAG + A + K P N
Sbjct: 478 ACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNS 537
Query: 280 VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL 321
++W ++ A + K+ E L+PD+G + ++L
Sbjct: 538 IVWGALLGASRLHNDEPMAELAAKKILE--LEPDNGAVYALL 577
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 354 bits (909), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 189/527 (35%), Positives = 290/527 (55%), Gaps = 39/527 (7%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLC---RHISSAVNVFNQVPY 79
L R +L ++Q HA +LK L D + A KL+A + + +S A ++ N++
Sbjct: 43 LSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGS 102
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
PN +NS+IRA+A N S P + + F M V+PD +++ F+LKAC +
Sbjct: 103 PNGFTHNSVIRAYA-NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
IH K G D+FV N+L++ Y R G I
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEI---------------------------- 193
Query: 200 GDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYS 259
A K+ D MP RD VSWN++L Y + G +++A LFD M + N+ SW+ M+ GY+
Sbjct: 194 -----ARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYA 248
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM-EEAGLKPDDGVLI 318
AG + A+ +FD P +++V W +++ YA G E +++KM +++ KPD L+
Sbjct: 249 AAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLV 308
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
S+L+ACA G L G+ +H + + + A +DMY+KCG +D A +F + T K
Sbjct: 309 SVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF-RATSK 367
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY 438
+D+ +WNS+I VHG G+ ALE+FS MV+EGF+P+ TFIG+L AC H G++D+ R
Sbjct: 368 RDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKL 427
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
F M VY + P IEHYGCM+DLL R G +EEA EL+ +P + +I++ +LLGAC+
Sbjct: 428 FEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFG 487
Query: 499 DVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMK 545
+E A ++ L +L D ++ +SN+YA G W V R M+
Sbjct: 488 QLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 353 bits (905), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 206/603 (34%), Positives = 297/603 (49%), Gaps = 74/603 (12%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
+KQIH L+ HLH D ++ L+ R + +F+ +PN+ LYNSLI +
Sbjct: 29 LKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF-V 87
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
N T F +++ G+Y FT+P +LKACT SS L +H+ V K GF D+
Sbjct: 88 NNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVA 147
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
SL+ YS G L+ A KLFDE+P+
Sbjct: 148 AMTSLLSIYSG---------------------------------SGRLNDAHKLFDEIPD 174
Query: 215 RDMVSWNTMLDGYAKAGEMNKAFELFDRM------------------------------- 243
R +V+W + GY +G +A +LF +M
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 244 --------LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFM 295
+Q N +T+V Y++ G M+ AR +FD EK++V W+T+I GYA F
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 296 KEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
KE L+ +M + LKPD ++ L++CA G L LG+ + + R F + + NA
Sbjct: 295 KEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANAL 354
Query: 356 IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
IDMYAKCG + F +F +M +KD+V N+ I G +G + + +F G PD
Sbjct: 355 IDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 416 KYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
TF+GLLC C HAGL+ G +FN++ VY + +EHYGCM+DL R G L++A+ L+
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 476 RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWM 535
MP+ PNAIV G LL CR+ D +LA + + L L P + GN+ LSNIY+ G W
Sbjct: 474 CDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWD 533
Query: 536 NVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVG 595
A VR M G +K G S I F D SHP SD IY + L +++R +G
Sbjct: 534 EAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMG 593
Query: 596 YVP 598
+VP
Sbjct: 594 FVP 596
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 177/379 (46%), Gaps = 16/379 (4%)
Query: 22 KLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
K CT R S+ L +H+ ++K + D+ L++ +S ++ A +F+++P +
Sbjct: 119 KACT--RASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS 176
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
V + +L + +G H F M GV PD++ +L AC L + I
Sbjct: 177 VVTWTALFSGYTTSGRHRE-AIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
++E+ ++ FV +L++ Y++CG ++ A +F +M E+D VTW++MI G
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCG--KMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 202 LDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNK---AFELFDRM-LQWNIISWST 253
+LF +M + D S L A G ++ L DR N+ +
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
++ Y++ G M +F + EK++V+ ISG A+ G +K + ++ + E+ G+ PD
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 314 DGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGI 371
+ +L C +G++ G + ++ C + V +D++ + G LD A+ +
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAIS-CVYALKRTVEHYGCMVDLWGRAGMLDDAYRL 472
Query: 372 FSKMTGKKDLVSWNSMIHG 390
M + + + W +++ G
Sbjct: 473 ICDMPMRPNAIVWGALLSG 491
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/583 (33%), Positives = 307/583 (52%), Gaps = 57/583 (9%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLC----RHISSAVNVFNQVPYPN 81
++ C + + QIHA +K+ +D A +++ + R + A +FNQ+P N
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRN 89
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFH--MQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
+N++IR + + +L T F+ M E V P+ FT+P +LKAC + +
Sbjct: 90 CFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQ 149
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
IH K+GF D FV ++L+ Y CG +
Sbjct: 150 IHGLALKYGFGGDEFVMSNLVRMYVMCGFMK----------------------------- 180
Query: 200 GDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYS 259
D + + E+DMV M D + GE I+ W+ M+ GY
Sbjct: 181 ---DARVLFYKNIIEKDMV---VMTDRRKRDGE---------------IVLWNVMIDGYM 219
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
R GD ARMLFDK ++++V W T+ISGY+ GF K+A ++ +M++ ++P+ L+S
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 320 ILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK 379
+L A + G L LG+ +H + R + +A IDMY+KCG ++ A +F ++ ++
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLP-RE 338
Query: 380 DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYF 439
++++W++MI+GF +HGQ A++ F M G P +I LL AC+H GLV++GR YF
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYF 398
Query: 440 NSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHND 499
+ M V G+ P+IEHYGCM+DLL R G L+EA E + +MP++P+ ++ LLGACRM +
Sbjct: 399 SQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGN 458
Query: 500 VELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIX 559
VE+ + ++ L +VP D G + LSN+YA G+W V+ +RL+MK +K G S I
Sbjct: 459 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLID 518
Query: 560 XXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGIYQ 602
F V D SHPK+ +I M+ + LR GY P Q
Sbjct: 519 IDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ 561
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 104/239 (43%), Gaps = 24/239 (10%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L + R +L+L + +H + + D + LI +S C I A++VF ++P NV
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGP----------S 132
++++I A++G F M++ GV P + Y LL AC+ S
Sbjct: 341 ITWSAMINGFAIHGQAGD-AIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
+ V + +E +G D+ + L+D + + + + D V W ++
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLD----------EAEEFILNMPIKPDDVIWKAL 449
Query: 193 IGGLVRGGDLDGAFKLFD---EMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI 248
+G G+++ ++ + +M D ++ + + YA G ++ E+ RM + +I
Sbjct: 450 LGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 346 bits (887), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 316/614 (51%), Gaps = 48/614 (7%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIA--AFSLCRHISSAVNVFNQVPYP 80
L L +C L +KQI AQ++ L D + + +LIA A S R++ +V + + P
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 81 NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGV---YPDNFTYPFLLKACTGPSSLPLV 137
N+ +N IR + +P +F + M R G PD+FTYP L K C L
Sbjct: 117 NIFSWNVTIRGFS-ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLV 197
MI HV K V N+ I ++ CG ++ A ++F RD V+WN +I G
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGD--MENARKVFDESPVRDLVSWNCLINGYK 233
Query: 198 RGGDLDGAFKLF----------DEMPERDMVS---------------------------- 219
+ G+ + A ++ D++ +VS
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293
Query: 220 -WNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKN 278
N ++D ++K G++++A +FD + + I+SW+TM+ GY+R G +D++R LFD EK+
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 279 LVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA 338
+VLW +I G + ++A L+ +M+ + KPD+ +I L+AC++ G L +G IH
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+++ + + + +DMYAKCG + A +F + + L ++ ++I G +HG
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSL-TYTAIIGGLALHGDAS 472
Query: 399 KALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCM 458
A+ F+ M+ G PD+ TFIGLL AC H G++ GR+YF+ M+ + + PQ++HY M
Sbjct: 473 TAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIM 532
Query: 459 IDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDP 518
+DLL R G LEEA L+ SMP+E +A V G LL CRMH +VEL ++ L +L PSD
Sbjct: 533 VDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDS 592
Query: 519 GNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSD 578
G + LL +Y +A W + R M G +K G SSI F V D S P+S+
Sbjct: 593 GIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 652
Query: 579 DIYQMIGRLVHDLR 592
IY + L +R
Sbjct: 653 KIYDRLHCLGRHMR 666
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 195/423 (46%), Gaps = 50/423 (11%)
Query: 22 KLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
K+C R S+L I +LK L +V I F+ C + +A VF++ P +
Sbjct: 164 KVCADLRLSSLG--HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD 221
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
+ +N LI + G + + M+ EGV PD+ T L+ +C+ L + +
Sbjct: 222 LVSWNCLINGYKKIGEAEKAIY-VYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFY 280
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
+V++ G I + N+L+D +S+CG I A R+F +E+R V+W +MI G R G
Sbjct: 281 EYVKENGLRMTIPLVNALMDMFSKCG--DIHEARRIFDNLEKRTIVSWTTMISGYARCGL 338
Query: 202 LDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM------------------ 243
LD + KLFD+M E+D+V WN M+ G +A A LF M
Sbjct: 339 LDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSA 398
Query: 244 ---------------------LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLW 282
L N+ +++V Y++ G++ A +F +N + +
Sbjct: 399 CSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY 458
Query: 283 TTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR 342
T II G A G A +++M +AG+ PD+ I +L+AC GM+ G+ + S +
Sbjct: 459 TAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRD-YFSQMK 517
Query: 343 CRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQ---G 397
RF + ++ + +D+ + G L+ A + M + D W +++ G +HG G
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELG 577
Query: 398 EKA 400
EKA
Sbjct: 578 EKA 580
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 191/573 (33%), Positives = 312/573 (54%), Gaps = 38/573 (6%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
+ +CS L++ A ++K L+QD + + I A + + + AV+ Q+ PNV +Y
Sbjct: 780 IKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVY 839
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
N+L + + SHP + + M R+ V P ++TY L+KA + S + + AH+
Sbjct: 840 NALFKGF-VTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFG--ESLQAHIW 896
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
KFGF + + +LID YS G + R+A
Sbjct: 897 KFGFGFHVKIQTTLIDFYSATGRI--------------REAR------------------ 924
Query: 206 FKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMD 265
K+FDEMPERD ++W TM+ Y + +M+ A L ++M + N + + ++ GY G+++
Sbjct: 925 -KVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLE 983
Query: 266 MARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA 325
A LF++ P K+++ WTT+I GY++ +EA ++ KM E G+ PD+ + ++++ACA
Sbjct: 984 QAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACA 1043
Query: 326 ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
G+L +GK++H + F + +A +DMY+KCG L+ A +F + KK+L WN
Sbjct: 1044 HLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP-KKNLFCWN 1102
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
S+I G HG ++AL++F+ M E +P+ TF+ + ACTHAGLVD+GR + SM
Sbjct: 1103 SIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDD 1162
Query: 446 YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARA 505
Y IV +EHYG M+ L S+ G + EA EL+ +M EPNA++ G LL CR+H ++ +A
Sbjct: 1163 YSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEI 1222
Query: 506 LSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKP-SGASSIXXXXXX 564
L L P + G + LL ++YA+ W +VA +R +M+ G +K G SSI
Sbjct: 1223 AFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRD 1282
Query: 565 XXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYV 597
F D SH SD++ ++ + + GYV
Sbjct: 1283 HLFAAADKSHSASDEVCLLLDEIYDQMGLAGYV 1315
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 193/444 (43%), Gaps = 82/444 (18%)
Query: 69 SAVNVFNQVPYPNVHLY--------NSLIRAHALN-GSHPSLTFSTFFHMQREGVYPDNF 119
S V +F ++HLY N+ H+L SH FS + P N
Sbjct: 722 SLVQIFQPKATNSLHLYRQSQILYMNAFANVHSLRVPSHHLRDFSASLSLA-----PPNL 776
Query: 120 TYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLID---SYSRCGGVGIDGAMR 176
++K C+ P L++ A + K +D + N I S+ R +D A+
Sbjct: 777 KK--IIKQCSTPK---LLESALAAMIKTSLNQDCRLMNQFITACTSFKR-----LDLAVS 826
Query: 177 LFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVS-----WNTMLDGYAKAG 231
+ M+E + +N++ G V + +L+ M RD VS +++++ + A
Sbjct: 827 TMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRML-RDSVSPSSYTYSSLVKASSFAS 885
Query: 232 EMNKAFE--LFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGY 289
++ + ++ +++ +T++ YS G + AR +FD+ PE++ + WTT++S Y
Sbjct: 886 RFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY 945
Query: 290 AEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCST 349
M A L ++M E + C +G +GLG
Sbjct: 946 RRVLDMDSANSLANQMSEKN---------EATSNCLINGYMGLGN--------------- 981
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
L+ A +F++M KD++SW +MI G+ + + +A+ +F M+
Sbjct: 982 ---------------LEQAESLFNQMP-VKDIISWTTMIKGYSQNKRYREAIAVFYKMME 1025
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRN-YFNSMEKVYGIVPQIEHYGCMIDLLSRGGHL 468
EG PD+ T ++ AC H G+++ G+ + +++ G V + ++D+ S+ G L
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQN--GFVLDVYIGSALVDMYSKCGSL 1083
Query: 469 EEAFELLRSMPVEP----NAIVVG 488
E A + ++P + N+I+ G
Sbjct: 1084 ERALLVFFNLPKKNLFCWNSIIEG 1107
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 254/419 (60%), Gaps = 3/419 (0%)
Query: 171 IDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKA 230
I A ++F M E++ V W SMI G + DL A + FD PERD+V WNTM+ GY +
Sbjct: 44 IASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEM 103
Query: 231 GEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
G M +A LFD+M +++SW+T++ GY+ GDM+ +FD PE+N+ W +I GYA
Sbjct: 104 GNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYA 163
Query: 291 EKGFMKEATVLYDKM-EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRF-RCS 348
+ G + E + +M +E + P+D + +L+ACA+ G GK +H + + +
Sbjct: 164 QNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVD 223
Query: 349 TKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMV 408
V NA IDMY KCG ++ A +F K ++DL+SWN+MI+G HG G +AL LF M
Sbjct: 224 VNVKNALIDMYGKCGAIEIAMEVF-KGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMK 282
Query: 409 HEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHL 468
+ G PDK TF+G+LCAC H GLV+ G YFNSM + I+P+IEH GC++DLLSR G L
Sbjct: 283 NSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFL 342
Query: 469 EEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIY 528
+A E + MPV+ +A++ TLLGA +++ V++ E L KL P +P NF +LSNIY
Sbjct: 343 TQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIY 402
Query: 529 AQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRL 587
AG + + A +++ M++ G +K +G S I F HP+++++ +++ L
Sbjct: 403 GDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 131/316 (41%), Gaps = 75/316 (23%)
Query: 231 GEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
G + A ++F M++ N++ W++M+ GY D+ AR FD PE+++VLW T+ISGY
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
E G M EA L+D+M CR S
Sbjct: 102 EMGNMLEARSLFDQMP------------------------------------CRDVMS-- 123
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
N ++ YA G ++A +F M ++++ SWN +I G+ +G+ + L F MV E
Sbjct: 124 -WNTVLEGYANIGDMEACERVFDDMP-ERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDE 181
Query: 411 G-FEPDKYTFIGLLCACTHAGLVDKGR----------------NYFNSMEKVYGIVPQIE 453
G P+ T +L AC G D G+ N N++ +YG IE
Sbjct: 182 GSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIE 241
Query: 454 ---------------HYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGACR 495
+ MI+ L+ GH EA L M + P+ + +L AC+
Sbjct: 242 IAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACK 301
Query: 496 MHNDVELARALSEHLF 511
VE A +F
Sbjct: 302 HMGLVEDGLAYFNSMF 317
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 15/226 (6%)
Query: 73 VFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGP 131
VF+ +P NV +N LI+ +A NG S +F M EG V P++ T +L AC
Sbjct: 143 VFDDMPERNVFSWNGLIKGYAQNG-RVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 132 SSLPLVQMIHAHVEKFGFYE-DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWN 190
+ + +H + E G+ + D+ V N+LID Y +CG + I AM +F ++ RD ++WN
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEI--AMEVFKGIKRRDLISWN 259
Query: 191 SMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW 246
+MI GL G A LF EM D V++ +L G + F+ M
Sbjct: 260 TMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTD 319
Query: 247 NIISWSTMVCG-----YSRAGDMDMARMLFDKCPEK-NLVLWTTII 286
I CG SRAG + A +K P K + V+W T++
Sbjct: 320 FSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 313/605 (51%), Gaps = 45/605 (7%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
QIH ++K +DL+V L+ ++ C + SA VF+++ NV + S+I +A
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR- 213
Query: 97 SHPSLTFSTFFHMQR-EGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
FF M R E V P++ T ++ AC L + ++A + G + +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM--- 212
++L+D Y +C ID A RLF + N+M VR G A +F+ M
Sbjct: 274 VSALVDMYMKCNA--IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 213 ---PER-----------------------------DMVSW----NTMLDGYAKAGEMNKA 236
P+R SW N ++D Y K + A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 237 FELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
F +FDRM +++W+++V GY G++D A F+ PEKN+V W TIISG + +
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 297 EATVLYDKME-EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
EA ++ M+ + G+ D ++SI +AC G L L K I+ +++ + ++
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 356 IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
+DM+++CG ++A IF+ +T +D+ +W + I + G E+A+ELF M+ +G +PD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLT-NRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 416 KYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
F+G L AC+H GLV +G+ F SM K++G+ P+ HYGCM+DLL R G LEEA +L+
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 476 RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWM 535
MP+EPN ++ +LL ACR+ +VE+A +E + L P G++ LLSN+YA AG W
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 536 NVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVG 595
++A VRL MK G +KP G SSI FT D SHP+ +I M+ + +G
Sbjct: 691 DMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLG 750
Query: 596 YVPGI 600
+VP +
Sbjct: 751 HVPDL 755
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 157/559 (28%), Positives = 237/559 (42%), Gaps = 116/559 (20%)
Query: 1 MQVSAGVRIPTWFSPRRLLEEKLCT------LHRCSNLDLVKQIHAQLLKAHLHQDLYVA 54
+ +S V T + LL + CT L C +D +K H L K L D+
Sbjct: 8 LHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTI 67
Query: 55 PKLIA---AFSLCRHISSAVNVF-NQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQ 110
KL+A +S A VF N Y +YNSLIR +A +G F M
Sbjct: 68 TKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL-LFLRMM 126
Query: 111 REGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVG 170
G+ PD +T+PF L AC + IH + K G+ +D+FV NSL+ Y+ CG
Sbjct: 127 NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG--- 183
Query: 171 IDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKA 230
+LD A K+FDEM ER++VSW +M+ GYA+
Sbjct: 184 ------------------------------ELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 231 GEMNKAFELFDRMLQWNIISWS--TMVC-------------------------------- 256
A +LF RM++ ++ + TMVC
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 257 ------GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
Y + +D+A+ LFD+ NL L + S Y +G +EA +++ M ++G+
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
+PD ++S +++C++ + GK H V R F + NA IDMY KC D AF
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 371 IFSKMTGK------------------------------KDLVSWNSMIHGFGVHGQGEKA 400
IF +M+ K K++VSWN++I G E+A
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 401 LELFSSM-VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMI 459
+E+F SM EG D T + + AC H G +D + + +EK GI + ++
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLV 512
Query: 460 DLLSRGGHLEEAFELLRSM 478
D+ SR G E A + S+
Sbjct: 513 DMFSRCGDPESAMSIFNSL 531
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 198/605 (32%), Positives = 314/605 (51%), Gaps = 45/605 (7%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
QIH ++K +DL+V L+ ++ C + SA VF+++ NV + S+I +A
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARR- 213
Query: 97 SHPSLTFSTFFHMQR-EGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
FF M R E V P++ T ++ AC L + ++A + G + +
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM--- 212
++L+D Y +C ID A RLF + N+M VR G A +F+ M
Sbjct: 274 VSALVDMYMKCNA--IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 213 ---PERDMV-----------------------------SW----NTMLDGYAKAGEMNKA 236
P+R + SW N ++D Y K + A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 237 FELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
F +FDRM +++W+++V GY G++D A F+ PEKN+V W TIISG + +
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFE 451
Query: 297 EATVLYDKME-EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
EA ++ M+ + G+ D ++SI +AC G L L K I+ +++ + ++
Sbjct: 452 EAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL 511
Query: 356 IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
+DM+++CG ++A IF+ +T + D+ +W + I + G E+A+ELF M+ +G +PD
Sbjct: 512 VDMFSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 416 KYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
F+G L AC+H GLV +G+ F SM K++G+ P+ HYGCM+DLL R G LEEA +L+
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 476 RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWM 535
MP+EPN ++ +LL ACR+ +VE+A +E + L P G++ LLSN+YA AG W
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 536 NVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVG 595
++A VRL MK G +KP G SSI FT D SHP+ +I M+ + +G
Sbjct: 691 DMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLG 750
Query: 596 YVPGI 600
+VP +
Sbjct: 751 HVPDL 755
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 157/559 (28%), Positives = 237/559 (42%), Gaps = 116/559 (20%)
Query: 1 MQVSAGVRIPTWFSPRRLLEEKLCT------LHRCSNLDLVKQIHAQLLKAHLHQDLYVA 54
+ +S V T + LL + CT L C +D +K H L K L D+
Sbjct: 8 LHLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTI 67
Query: 55 PKLIA---AFSLCRHISSAVNVF-NQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQ 110
KL+A +S A VF N Y +YNSLIR +A +G F M
Sbjct: 68 TKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAIL-LFLRMM 126
Query: 111 REGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVG 170
G+ PD +T+PF L AC + IH + K G+ +D+FV NSL+ Y+ CG
Sbjct: 127 NSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG--- 183
Query: 171 IDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKA 230
+LD A K+FDEM ER++VSW +M+ GYA+
Sbjct: 184 ------------------------------ELDSARKVFDEMSERNVVSWTSMICGYARR 213
Query: 231 GEMNKAFELFDRMLQWNIISWS--TMVC-------------------------------- 256
A +LF RM++ ++ + TMVC
Sbjct: 214 DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLM 273
Query: 257 ------GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
Y + +D+A+ LFD+ NL L + S Y +G +EA +++ M ++G+
Sbjct: 274 VSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV 333
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
+PD ++S +++C++ + GK H V R F + NA IDMY KC D AF
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 371 IFSKMTGK------------------------------KDLVSWNSMIHGFGVHGQGEKA 400
IF +M+ K K++VSWN++I G E+A
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 401 LELFSSM-VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMI 459
+E+F SM EG D T + + AC H G +D + + +EK GI + ++
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK-NGIQLDVRLGTTLV 512
Query: 460 DLLSRGGHLEEAFELLRSM 478
D+ SR G E A + S+
Sbjct: 513 DMFSRCGDPESAMSIFNSL 531
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 338 bits (866), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 200/585 (34%), Positives = 312/585 (53%), Gaps = 20/585 (3%)
Query: 25 TLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHL 84
L C + +IH LK D+YVA LI +S + + +A +F+++P ++
Sbjct: 159 VLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS 218
Query: 85 YNSLIRAHALNG-SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+N++I + +G + +LT S D+ T LL ACT IH++
Sbjct: 219 WNAMISGYCQSGNAKEALTLSNGLRAM------DSVTVVSLLSACTEAGDFNRGVTIHSY 272
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
K G ++FV N LID Y+ G + ++F M RD ++WNS+I
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGR--LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 204 GAFKLFDEM------PE-RDMVSWNTMLD--GYAKAGEMNKAFELFDRMLQWNIISWSTM 254
A LF EM P+ ++S ++L G +A + F L +I + +
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG-LKPD 313
V Y++ G +D AR +F+ P +++ W TIISGYA+ GF EA +Y+ MEE G + +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 314 DGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFS 373
G +S+L AC+++G L G K+H + + V+ + DMY KCG L+ A +F
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 374 KMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVD 433
++ + + V WN++I G HG GEKA+ LF M+ EG +PD TF+ LL AC+H+GLVD
Sbjct: 511 QIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 434 KGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGA 493
+G+ F M+ YGI P ++HYGCM+D+ R G LE A + ++SM ++P+A + G LL A
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 494 CRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPS 553
CR+H +V+L + SEHLF++ P G LLSN+YA AG W V +R G +K
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Query: 554 GASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
G SS+ F + +HP +++Y+ + L L+ +GYVP
Sbjct: 690 GWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVP 734
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/516 (26%), Positives = 252/516 (48%), Gaps = 16/516 (3%)
Query: 25 TLHR-CSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVH 83
TL R C+NL K +HA+L+ + Q++ ++ KL+ + +++ A + F+ + +V+
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVY 118
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+N +I + G+ + M G+ PD T+P +LKAC ++ IH
Sbjct: 119 AWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCL 175
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
KFGF D++V SLI YSR VG A LF M RD +WN+MI G + G+
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVG--NARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 204 GAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFEL----FDRMLQWNIISWSTMVCGYS 259
A L + + D V+ ++L +AG+ N+ + L+ + + ++ Y+
Sbjct: 234 EALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
G + + +FD+ ++L+ W +II Y A L+ +M + ++PD LIS
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 320 ILTACAESGMLGLGKKIHA-SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
+ + ++ G + + + ++++ F + NA + MYAK G +D+A +F+ +
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-N 412
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRN 437
D++SWN++I G+ +G +A+E+++ M EG ++ T++ +L AC+ AG + +G
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 438 YFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMH 497
+ K G+ + + D+ + G LE+A L +P N++ TL+ H
Sbjct: 473 LHGRLLK-NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFH 530
Query: 498 NDVELARAL-SEHLFKLVPSDPGNFSLLSNIYAQAG 532
E A L E L + V D F L + + +G
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 566
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 311/584 (53%), Gaps = 58/584 (9%)
Query: 25 TLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCR---------------HISS 69
L C D V QIH +L+K + ++ + +++ AF+ R H+ S
Sbjct: 18 VLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCS 77
Query: 70 AVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACT 129
F +V P L+N++I++H+ +G P M GV D F+ +LKAC+
Sbjct: 78 FS--FGEVEDP--FLWNAVIKSHS-HGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACS 132
Query: 130 GPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTW 189
+ IH ++K G + D+F+ N LI Y +CG +G+ + ++F M +RD+V++
Sbjct: 133 RLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGL--SRQMFDRMPKRDSVSY 190
Query: 190 NSMIGGLVRGG----------------------------------DLDGAFKLFDEMPER 215
NSMI G V+ G +D A KLF +MPE+
Sbjct: 191 NSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEK 250
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCP 275
D++SWN+M+DGY K G + A LFD M + ++++W+TM+ GY++ G + A+ LFD+ P
Sbjct: 251 DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMP 310
Query: 276 EKNLVLWTTIISGYAEKGFMKEATVLYDKME-EAGLKPDDGVLISILTACAESGMLGLGK 334
+++V + ++++GY + + EA ++ ME E+ L PDD L+ +L A A+ G L
Sbjct: 311 HRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 335 KIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVH 394
+H + +F K+ A IDMY+KCG + A +F + K + WN+MI G +H
Sbjct: 371 DMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS-IDHWNAMIGGLAIH 429
Query: 395 GQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEH 454
G GE A ++ + +PD TF+G+L AC+H+GLV +G F M + + I P+++H
Sbjct: 430 GLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQH 489
Query: 455 YGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLV 514
YGCM+D+LSR G +E A L+ MPVEPN ++ T L AC H + E +++HL
Sbjct: 490 YGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQA 549
Query: 515 PSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
+P ++ LLSN+YA G W +V VR MK +K G S I
Sbjct: 550 GYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 202/583 (34%), Positives = 306/583 (52%), Gaps = 74/583 (12%)
Query: 21 EKLCTL-HRCSNLDLVKQIHAQLLKAHL--HQDLYVAP-KLIAAFSLCRHISSAVNVFNQ 76
EKL L + ++D V QIHA +L+ +L H V KL A++ I ++ +F+Q
Sbjct: 30 EKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQ 89
Query: 77 VPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPL 136
P++ L+ + I ++NG F + + + P+ FT+ LLK+C+ S
Sbjct: 90 TIDPDLFLFTAAINTASINGLKDQ-AFLLYVQLLSSEINPNEFTFSSLLKSCSTKSG--- 145
Query: 137 VQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGL 196
++IH HV KFG D +V L+D Y++
Sbjct: 146 -KLIHTHVLKFGLGIDPYVATGLVDVYAK------------------------------- 173
Query: 197 VRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVC 256
GGD+ A K+FD MPER +VS M+ YAK G + A LFD M + +I+SW+ M+
Sbjct: 174 --GGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMID 231
Query: 257 GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
GY++ G + A MLF K + E KPD+
Sbjct: 232 GYAQHGFPNDALMLFQKL------------------------------LAEGKPKPDEIT 261
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
+++ L+AC++ G L G+ IH V+ R R + KV IDMY+KCG L+ A +F+ T
Sbjct: 262 VVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND-T 320
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH-EGFEPDKYTFIGLLCACTHAGLVDKG 435
+KD+V+WN+MI G+ +HG + AL LF+ M G +P TFIG L AC HAGLV++G
Sbjct: 321 PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEG 380
Query: 436 RNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACR 495
F SM + YGI P+IEHYGC++ LL R G L+ A+E +++M ++ ++++ ++LG+C+
Sbjct: 381 IRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCK 440
Query: 496 MHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGA 555
+H D L + ++E+L L + G + LLSNIYA GD+ VA VR MK G K G
Sbjct: 441 LHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGI 500
Query: 556 SSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
S+I F D H KS +IY M+ ++ ++ GYVP
Sbjct: 501 STIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVP 543
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/569 (34%), Positives = 302/569 (53%), Gaps = 10/569 (1%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+ IH Q + +L + ++ + + A VF+++P + L+N++I + N
Sbjct: 139 RVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKN 198
Query: 96 GSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
+ + F + E D T +L A L L IH+ K G Y +
Sbjct: 199 EMYVE-SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE-MP 213
V I YS+CG + + A LF + D V +N+MI G G+ + + LF E M
Sbjct: 258 VLTGFISLYSKCGKIKMGSA--LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG----YSRAGDMDMARM 269
+ +T++ +G + + + L+ N +S +++ YS+ +++ AR
Sbjct: 316 SGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARK 375
Query: 270 LFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGM 329
LFD+ PEK+L W +ISGY + G ++A L+ +M+++ P+ + IL+ACA+ G
Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGA 435
Query: 330 LGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIH 389
L LGK +H V+ F S V A I MYAKCG + A +F MT KK+ V+WN+MI
Sbjct: 436 LSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEVTWNTMIS 494
Query: 390 GFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIV 449
G+G+HGQG++AL +F M++ G P TF+ +L AC+HAGLV +G FNSM YG
Sbjct: 495 GYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Query: 450 PQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEH 509
P ++HY CM+D+L R GHL+ A + + +M +EP + V TLLGACR+H D LAR +SE
Sbjct: 555 PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEK 614
Query: 510 LFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTV 569
LF+L P + G LLSNI++ ++ A+VR K K G + I FT
Sbjct: 615 LFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTS 674
Query: 570 FDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
D SHP+ +IY+ + +L +R+ GY P
Sbjct: 675 GDQSHPQVKEIYEKLEKLEGKMREAGYQP 703
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 218/480 (45%), Gaps = 19/480 (3%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
R +++ + Q HAQ++ D+ + KL S I A ++F V P+V L+N
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 88 LIRAHALNGSHPSLTFSTFFHMQRE-GVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEK 146
L+R ++N S P + S F H+++ + P++ TY F + A +G ++IH
Sbjct: 89 LMRGFSVNES-PHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVV 147
Query: 147 FGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAF 206
G ++ + ++++ Y + V + A ++F M E+D + WN+MI G + +
Sbjct: 148 DGCDSELLLGSNIVKMYFKFWRV--EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 207 KLFDEMPERDMVSWNT-----MLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG---- 257
++F ++ +T +L A+ E+ ++ + S ++ G
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISL 265
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
YS+ G + M LF + + ++V + +I GY G + + L+ ++ +G + L
Sbjct: 266 YSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTL 325
Query: 318 ISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG 377
+S++ SG L L IH + F V A +Y+K +++A +F + +
Sbjct: 326 VSLVPV---SGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE-SP 381
Query: 378 KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN 437
+K L SWN+MI G+ +G E A+ LF M F P+ T +L AC G + G+
Sbjct: 382 EKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK- 440
Query: 438 YFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMH 497
+ + + + I +I + ++ G + EA L M + N + T++ +H
Sbjct: 441 WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TKKNEVTWNTMISGYGLH 499
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 179/450 (39%), Positives = 252/450 (56%), Gaps = 4/450 (0%)
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
D F N ++ Y R V + A F M +DA +WN+MI G R G+++ A +LF
Sbjct: 123 DTFSYNIMLSCYVR--NVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYS 180
Query: 212 MPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLF 271
M E++ VSWN M+ GY + G++ KA F +++W+ M+ GY +A +++A +F
Sbjct: 181 MMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMF 240
Query: 272 -DKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGML 330
D KNLV W +ISGY E ++ L+ M E G++P+ L S L C+E L
Sbjct: 241 KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSAL 300
Query: 331 GLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHG 390
LG++IH V + L + I MY KCG L A+ +F M KKD+V+WN+MI G
Sbjct: 301 QLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISG 359
Query: 391 FGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP 450
+ HG +KAL LF M+ PD TF+ +L AC HAGLV+ G YF SM + Y + P
Sbjct: 360 YAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEP 419
Query: 451 QIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHL 510
Q +HY CM+DLL R G LEEA +L+RSMP P+A V GTLLGACR+H +VELA +E L
Sbjct: 420 QPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKL 479
Query: 511 FKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVF 570
+L + + L+NIYA W +VA VR +MK + K G S I F
Sbjct: 480 LQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSS 539
Query: 571 DHSHPKSDDIYQMIGRLVHDLRQVGYVPGI 600
D HP+ D I++ + L ++ GY P +
Sbjct: 540 DRIHPELDSIHKKLKELEKKMKLAGYKPEL 569
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 165/363 (45%), Gaps = 32/363 (8%)
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAK-AGEMNKAFELFDRMLQWNI 248
N +I VR GD+DGA ++F M ++ ++WN++L G +K M +A +LFD + + +
Sbjct: 65 NKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDT 124
Query: 249 ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEA 308
S++ M+ Y R + + A+ FD+ P K+ W T+I+GYA +G M++A L+ M E
Sbjct: 125 FSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK 184
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIH-ASVQRCRFRCSTKVLNAFIDMYAKCGCLDA 367
+ +IS C + L K H V R A I Y K ++
Sbjct: 185 N-EVSWNAMISGYIECGD-----LEKASHFFKVAPVR---GVVAWTAMITGYMKAKKVEL 235
Query: 368 AFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
A +F MT K+LV+WN+MI G+ + + E L+LF +M+ EG P+ L C+
Sbjct: 236 AEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCS 295
Query: 428 HAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVV 487
+ GR + K + + +I + + G L +A++L M + + +
Sbjct: 296 ELSALQLGRQIHQIVSKS-TLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAW 353
Query: 488 GTLLGACRMHNDVELARALSEHLF--KLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMK 545
++ H + + A L + K+ P DW+ +V L
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRP-----------------DWITFVAVLLACN 396
Query: 546 NAG 548
+AG
Sbjct: 397 HAG 399
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 81 NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
N+ +N++I + N S P F M EG+ P++ L C+ S+L L + I
Sbjct: 248 NLVTWNAMISGYVEN-SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI 306
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
H V K D+ SLI Y +CG +G A +LF M+++D V WN+MI G + G
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELG--DAWKLFEVMKKKDVVAWNAMISGYAQHG 364
Query: 201 DLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-----W 251
+ D A LF EM + D +++ +L AG +N F+ M++ + +
Sbjct: 365 NADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY 424
Query: 252 STMVCGYSRAGDMDMARMLFDKCP 275
+ MV RAG ++ A L P
Sbjct: 425 TCMVDLLGRAGKLEEALKLIRSMP 448
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 335 bits (859), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 199/616 (32%), Positives = 317/616 (51%), Gaps = 60/616 (9%)
Query: 39 HAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSH 98
HA L +++V L+A +S CR +S A VF+++ +V +NS+I ++A G
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGK- 208
Query: 99 PSLTFSTFFHMQRE-GVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPN 157
P + F M E G PDN T +L C + L + +H +++FV N
Sbjct: 209 PKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN 268
Query: 158 SLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER-- 215
L+D Y++CG +D A +FS M +D V+WN+M+ G + G + A +LF++M E
Sbjct: 269 CLVDMYAKCGM--MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 216 --DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----ISWSTMVCG------------ 257
D+V+W+ + GYA+ G +A + +ML I ++ +++ G
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 258 ------------------------------YSRAGDMDMARMLFDKCP--EKNLVLWTTI 285
Y++ +D AR +FD E+++V WT +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 286 ISGYAEKGFMKEATVLYDKM--EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRC 343
I GY++ G +A L +M E+ +P+ + L ACA L +GK+IHA R
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 344 RFRCSTK-VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALE 402
+ V N IDMYAKCG + A +F M K + V+W S++ G+G+HG GE+AL
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHGYGEEALG 565
Query: 403 LFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLL 462
+F M GF+ D T + +L AC+H+G++D+G YFN M+ V+G+ P EHY C++DLL
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 463 SRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFS 522
R G L A L+ MP+EP +V L CR+H VEL +E + +L + G+++
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYT 685
Query: 523 LLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQ 582
LLSN+YA AG W +V +R M++ G +K G S + F V D +HP + +IYQ
Sbjct: 686 LLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ 745
Query: 583 MIGRLVHDLRQVGYVP 598
++ + ++ +GYVP
Sbjct: 746 VLLDHMQRIKDIGYVP 761
Score = 219 bits (559), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 160/545 (29%), Positives = 260/545 (47%), Gaps = 63/545 (11%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
+H+C + VK IH +LL + L + LI+ + +S AV++ + P + +Y
Sbjct: 35 IHKCKTISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVY 93
Query: 86 --NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
NSLIR++ NG + F M PDN+T+PF+ KAC SS+ + HA
Sbjct: 94 HWNSLIRSYGDNGCANKCLY-LFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHAL 152
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
GF ++FV N+L+ YSRC + A ++F M D V+WNS+I + G
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCR--SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 204 GAFKLFDEMPE----------------------------------------RDMVSWNTM 223
A ++F M ++M N +
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 224 LDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NL 279
+D YAK G M++A +F M +++SW+ MV GYS+ G + A LF+K E+ ++
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 280 VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA- 338
V W+ ISGYA++G EA + +M +G+KP++ LIS+L+ CA G L GK+IH
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 339 ------SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK-KDLVSWNSMIHGF 391
+++ V+N IDMYAKC +D A +F ++ K +D+V+W MI G+
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 392 GVHGQGEKALELFSSMVHEGFE--PDKYTFIGLLCACTHAGLVDKGRN-YFNSMEKVYGI 448
HG KALEL S M E + P+ +T L AC + G+ + ++
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 449 VPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSE 508
VP C+ID+ ++ G + +A + +M + N + +L+ MH E A + +
Sbjct: 511 VPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHGYGEEALGIFD 568
Query: 509 HLFKL 513
+ ++
Sbjct: 569 EMRRI 573
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 301/565 (53%), Gaps = 20/565 (3%)
Query: 35 VKQIHAQLLKA---HLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
+KQIH LL + + +DL+++ L + A + Q+ ++ L++SLI
Sbjct: 17 LKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI-G 75
Query: 92 HALNGS--HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF 149
H G + L+F + HM+R GV P T+P LLKA Q HAH+ KFG
Sbjct: 76 HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGL 134
Query: 150 YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
D FV NSLI YS G D A RLF E++D VTW +MI G VR G A F
Sbjct: 135 DSDPFVRNSLISGYSSSGL--FDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYF 192
Query: 210 DEMPERDMVSWNTMLDGYAKA---------GEMNKAFELFDRMLQWNIISWSTMVCGYSR 260
EM + + + + KA G L ++ ++ S++V Y +
Sbjct: 193 VEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGK 252
Query: 261 AGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISI 320
D A+ +FD+ P +N+V WT +I+GY + + +++++M ++ + P++ L S+
Sbjct: 253 CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 321 LTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKD 380
L+ACA G L G+++H + + +T ID+Y KCGCL+ A +F ++ +K+
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL-HEKN 371
Query: 381 LVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFN 440
+ +W +MI+GF HG A +LF +M+ P++ TF+ +L AC H GLV++GR F
Sbjct: 372 VYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFL 431
Query: 441 SMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDV 500
SM+ + + P+ +HY CM+DL R G LEEA L+ MP+EP +V G L G+C +H D
Sbjct: 432 SMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDY 491
Query: 501 ELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXX 560
EL + + + KL PS G ++LL+N+Y+++ +W VA VR QMK+ K G S I
Sbjct: 492 ELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEV 551
Query: 561 XXXXXXFTVFDHSHP-KSDDIYQMI 584
F FD P +SDD+Y+ +
Sbjct: 552 KGKLCEFIAFDDKKPLESDDLYKTL 576
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 195/565 (34%), Positives = 300/565 (53%), Gaps = 81/565 (14%)
Query: 35 VKQIHAQLLKA------HLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSL 88
+KQ+HA L+ L Q L + P L+ A L H ++ LYN L
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLIPNLVYARKLFDHHQNSCTF----------LYNKL 53
Query: 89 IRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFG 148
I+A+ ++ P + + + +G+ P + T+ F+ A SS ++++H+ + G
Sbjct: 54 IQAYYVH-HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSG 112
Query: 149 FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKL 208
F D F +LI +Y++ G L A ++
Sbjct: 113 FESDSFCCTTLITAYAKLGA---------------------------------LCCARRV 139
Query: 209 FDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMAR 268
FDEM +RD+ WN M+ GY + G+M A ELFD M + N+ SW+T++ G+S+ G+ A
Sbjct: 140 FDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEAL 199
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG 328
+F C EK + +KP+ ++S+L ACA G
Sbjct: 200 KMF-LCMEK-----------------------------DKSVKPNHITVVSVLPACANLG 229
Query: 329 MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
L +G+++ + F + V NA I+MY+KCG +D A +F ++ +++L SWNSMI
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGI 448
HG+ ++AL LF+ M+ EG +PD TF+GLL AC H G+V KG+ F SME+V+ I
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKI 349
Query: 449 VPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSE 508
P++EHYGCMIDLL R G L+EA++L+++MP++P+A+V GTLLGAC H +VE+A SE
Sbjct: 350 SPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASE 409
Query: 509 HLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASS-IXXXXXXXXF 567
LFKL P++PGN ++SNIYA W V +R MK K +G S + F
Sbjct: 410 ALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKF 469
Query: 568 TVFDHSHPKSDDIYQMIGRLVHDLR 592
TV D SHP+S +IYQ++ + ++
Sbjct: 470 TVEDKSHPRSYEIYQVLEEIFRRMK 494
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/556 (33%), Positives = 302/556 (54%), Gaps = 24/556 (4%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLC---RHISSAVNVFNQVPY 79
L L C +L + Q+H ++K+ + +++ +LI + C ++S A +VF +
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P+V+++NS+IR ++ N +P + M R+G PD FT+P++LKAC+G +
Sbjct: 70 PSVYIWNSMIRGYS-NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
+H V K GF +++V L+ Y CG V + +R+F + + + V W S+I G V
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEV--NYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 200 GDLDGAFKLFDEMPERDMVSWNT-MLD-----GYAKAGEMNKAFE----------LFDRM 243
A + F EM + + T M+D G K K F F
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 244 LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYD 303
+ +N+I ++++ Y++ GD+ AR LFD PE+ LV W +II+GY++ G +EA ++
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 304 KMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
M + G+ PD +S++ A G LG+ IHA V + F ++ A ++MYAK G
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTG 366
Query: 364 CLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG-FEPDKYTFIGL 422
++A F + KKD ++W +I G HG G +AL +F M +G PD T++G+
Sbjct: 367 DAESAKKAFEDLE-KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGV 425
Query: 423 LCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEP 482
L AC+H GLV++G+ YF M ++G+ P +EHYGCM+D+LSR G EEA L+++MPV+P
Sbjct: 426 LYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP 485
Query: 483 NAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRL 542
N + G LL C +H ++EL + + + G + LLSNIYA+AG W +V +R
Sbjct: 486 NVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRE 545
Query: 543 QMKNAGGQKPSGASSI 558
MK+ K G SS+
Sbjct: 546 SMKSKRVDKVLGHSSV 561
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 296/549 (53%), Gaps = 48/549 (8%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P++ +YN ++++ A +G + + F ++ +G+YPDNFT P +LK+ + +
Sbjct: 9 PSLLMYNKMLKSLA-DGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEK 67
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
+H + K G D +V NSL+ Y+ G + I ++F M +RD V+WN +I V
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEI--THKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 200 GDLDGAFKLFDEMPERDMVSW--------------------------------------- 220
G + A +F M + + +
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIG 185
Query: 221 NTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
N ++D + K G ++KA +FD M N+ W++MV GY G +D AR+LF++ P K++V
Sbjct: 186 NALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVV 245
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
LWT +++GY + EA L+ M+ AG++PD+ VL+S+LT CA++G L GK IH +
Sbjct: 246 LWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYI 305
Query: 341 QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
R V A +DMYAKCGC++ A +F ++ ++D SW S+I+G ++G +A
Sbjct: 306 NENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMNGMSGRA 364
Query: 401 LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMID 460
L+L+ M + G D TF+ +L AC H G V +GR F+SM + + + P+ EH C+ID
Sbjct: 365 LDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLID 424
Query: 461 LLSRGGHLEEAFELLRSMPVEPNAIVV---GTLLGACRMHNDVELARALSEHLFKLVPSD 517
LL R G L+EA EL+ M E + +V +LL A R + +V++A ++E L K+ SD
Sbjct: 425 LLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSD 484
Query: 518 PGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDH--SHP 575
+LL+++YA A W +V +VR +MK+ G +K G SSI F V D SHP
Sbjct: 485 SSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHP 544
Query: 576 KSDDIYQMI 584
K D+I M+
Sbjct: 545 KMDEINSML 553
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 175/386 (45%), Gaps = 45/386 (11%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+++H +KA L D YV+ L+ ++ I VF+++P +V +N LI ++ N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 96 GSHPSLTFSTFFHMQREGVYP-DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
G F M +E D T L AC+ +L + + I+ V F +
Sbjct: 126 GRFED-AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFEMSVR 183
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
+ N+L+D + +CG +D A +F +M +++ W SM+ G V G +D A LF+ P
Sbjct: 184 IGNALVDMFCKCGC--LDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPV 241
Query: 215 RDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI-------------------------- 248
+D+V W M++GY + ++A ELF M I
Sbjct: 242 KDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWI 301
Query: 249 -------------ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFM 295
+ + +V Y++ G ++ A +F + E++ WT++I G A G
Sbjct: 302 HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMS 361
Query: 296 KEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKI-HASVQRCRFRCSTKVLNA 354
A LY +ME G++ D +++LTAC G + G+KI H+ +R + ++ +
Sbjct: 362 GRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSC 421
Query: 355 FIDMYAKCGCLDAAFGIFSKMTGKKD 380
ID+ + G LD A + KM G+ D
Sbjct: 422 LIDLLCRAGLLDEAEELIDKMRGESD 447
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 189/544 (34%), Positives = 291/544 (53%), Gaps = 14/544 (2%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
L++ + I A VF+ +P NV + +L++ + NG + S F+ M +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGK-VDVAESLFWKMPEKNKVS 143
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
L+ + L +MI +D S+I + G V D A
Sbjct: 144 WTVMLIGFLQDGRIDDACKLYEMIPD--------KDNIARTSMIHGLCKEGRV--DEARE 193
Query: 177 LFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKA 236
+F M ER +TW +M+ G + +D A K+FD MPE+ VSW +ML GY + G + A
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDA 253
Query: 237 FELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
ELF+ M +I+ + M+ G + G++ AR +FD E+N W T+I + GF
Sbjct: 254 EELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFEL 313
Query: 297 EATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFI 356
EA L+ M++ G++P LISIL+ CA L GK++HA + RC+F V + +
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 357 DMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG-FEPD 415
MY KCG L + IF + KD++ WNS+I G+ HG GE+AL++F M G +P+
Sbjct: 374 TMYIKCGELVKSKLIFDRFPS-KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPN 432
Query: 416 KYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
+ TF+ L AC++AG+V++G + SME V+G+ P HY CM+D+L R G EA E++
Sbjct: 433 EVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Query: 476 RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWM 535
SM VEP+A V G+LLGACR H+ +++A ++ L ++ P + G + LLSN+YA G W
Sbjct: 493 DSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWA 552
Query: 536 NVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFD-HSHPKSDDIYQMIGRLVHDLRQV 594
+VA +R MK +K G S FT +SHP+ + I +++ L LR+
Sbjct: 553 DVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREA 612
Query: 595 GYVP 598
GY P
Sbjct: 613 GYNP 616
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 169/344 (49%), Gaps = 29/344 (8%)
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERD 216
N I SR G I A +LF + + + +WNSM+ G A KLFDEMP+R+
Sbjct: 21 NVRITHLSRIGK--IHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 217 MVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPE 276
++SWN ++ GY K GE+++A ++FD M + N++SW+ +V GY G +D+A LF K PE
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 277 KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKI 336
KN V WT ++ G+ + G + +A LY+ + + D+ S++ + G + ++I
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEAREI 194
Query: 337 HASV-QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHG 395
+ +R +T V Y + +D A IF M K + VSW SM+ G+ +G
Sbjct: 195 FDEMSERSVITWTTMVTG-----YGQNNRVDDARKIFDVMPEKTE-VSWTSMLMGYVQNG 248
Query: 396 QGEKALELFSSMVHEGFEPDKYTFI--GLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIE 453
+ E A ELF M P K ++ G + K R F+SM++
Sbjct: 249 RIEDAEELFEVM------PVKPVIACNAMISGLGQKGEIAKARRVFDSMKE-----RNDA 297
Query: 454 HYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLLGAC 494
+ +I + R G EA F L++ V P + ++L C
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 144/299 (48%), Gaps = 22/299 (7%)
Query: 188 TWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWN 247
T N I L R G + A KLFD + + SWN+M+ GY A +LFD M N
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
IISW+ +V GY + G++D AR +FD PE+N+V WT ++ GY G + A L+ KM E
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDA 367
+LI L + G + K++ + T +++ K G +D
Sbjct: 139 KNKVSWTVMLIGFL----QDGRIDDACKLYEMIPDKDNIARTSMIHGL----CKEGRVDE 190
Query: 368 AFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
A IF +M+ ++ +++W +M+ G+G + + + A ++F M E + ++ +L
Sbjct: 191 AREIFDEMS-ERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSML---- 241
Query: 428 HAGLVDKGRNYFNSMEKVYGIVPQIEHYGC--MIDLLSRGGHLEEAFELLRSMPVEPNA 484
G V GR E+++ ++P C MI L + G + +A + SM +A
Sbjct: 242 -MGYVQNGR--IEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 10/186 (5%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
KQ+HAQL++ D+YVA L+ + C + + +F++ P ++ ++NS+I +A +
Sbjct: 351 KQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 96 GSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEK-FGFYEDI 153
G F M G P+ T+ L AC+ + I+ +E FG
Sbjct: 411 GLGEE-ALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPIT 469
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAME-ERDAVTWNSMIGGLVRGGDLD----GAFKL 208
++D R G + AM + +M E DA W S++G LD A KL
Sbjct: 470 AHYACMVDMLGRAG--RFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKL 527
Query: 209 FDEMPE 214
+ PE
Sbjct: 528 IEIEPE 533
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 193/592 (32%), Positives = 319/592 (53%), Gaps = 19/592 (3%)
Query: 22 KLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
++CT S D Q+H LLK+ +L + LI + CR A VF+ +P N
Sbjct: 14 RVCTRKGLS--DQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
V +++L+ H LNG + S F M R+G+YP+ FT+ LKAC ++L IH
Sbjct: 72 VVSWSALMSGHVLNGDLKG-SLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
K GF + V NSL+D YS+CG I+ A ++F + +R ++WN+MI G V G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGR--INEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 202 LDGAFKLFDEMPER------DMVSWNTMLDGYAKAGEMNKAFELFDRMLQ--WNIISWST 253
A F M E D + ++L + G + ++ +++ ++ S +T
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 254 ----MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
+V Y + G + AR FD+ EK ++ W+++I GYA++G EA L+ +++E
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
+ D L SI+ A+ +L GK++ A + T VLN+ +DMY KCG +D A
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAE 368
Query: 370 GIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHA 429
F++M KD++SW +I G+G HG G+K++ +F M+ EPD+ ++ +L AC+H+
Sbjct: 369 KCFAEMQ-LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 430 GLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGT 489
G++ +G F+ + + +GI P++EHY C++DLL R G L+EA L+ +MP++PN + T
Sbjct: 428 GMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQT 487
Query: 490 LLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGG 549
LL CR+H D+EL + + + L ++ +P N+ ++SN+Y QAG W + R G
Sbjct: 488 LLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGL 547
Query: 550 QKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLR-QVGYVPGI 600
+K +G S + F + SHP + I + + LR ++GYV G+
Sbjct: 548 KKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGL 599
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 6/176 (3%)
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
L+SIL C G+ G ++H + + + N IDMY KC A+ +F M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
++++VSW++++ G ++G + +L LFS M +G P+++TF L AC ++KG
Sbjct: 69 -ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP----VEPNAIVVG 488
K+ G +E ++D+ S+ G + EA ++ R + + NA++ G
Sbjct: 128 QIHGFCLKI-GFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 326 bits (835), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 202/640 (31%), Positives = 316/640 (49%), Gaps = 78/640 (12%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q HA++LK+ D Y++ KLIA++S + A V +P P ++ ++SLI A
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYA-LTKA 94
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
+ + F M G+ PD+ P L K C S+ + + IH G D FV
Sbjct: 95 KLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQ 154
Query: 157 NSLIDSYSRCGGVG-----------------------------IDGAMRLFSAME----E 183
S+ Y RCG +G ++ +R+ S ME E
Sbjct: 155 GSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIE 214
Query: 184 RDAVTWNSMIGGLVRGGDLDGAFKLFDEM------PERDMVS------------------ 219
+ V+WN ++ G R G A +F ++ P++ VS
Sbjct: 215 ANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLI 274
Query: 220 ---------------WNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDM 264
+ M+D Y K+G + LF++ + + G SR G +
Sbjct: 275 HGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLV 334
Query: 265 DMARMLFD----KCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISI 320
D A +F+ + E N+V WT+II+G A+ G EA L+ +M+ AG+KP+ + S+
Sbjct: 335 DKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 321 LTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKD 380
L AC LG G+ H R + V +A IDMYAKCG ++ + +F+ M K+
Sbjct: 395 LPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP-TKN 453
Query: 381 LVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFN 440
LV WNS+++GF +HG+ ++ + +F S++ +PD +F LL AC GL D+G YF
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513
Query: 441 SMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDV 500
M + YGI P++EHY CM++LL R G L+EA++L++ MP EP++ V G LL +CR+ N+V
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNV 573
Query: 501 ELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXX 560
+LA +E LF L P +PG + LLSNIYA G W V S+R +M++ G +K G S I
Sbjct: 574 DLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Query: 561 XXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGI 600
D SHP+ D I + + + ++R+ G+ P +
Sbjct: 634 KNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNL 673
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 325 bits (834), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 208/637 (32%), Positives = 316/637 (49%), Gaps = 113/637 (17%)
Query: 56 KLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSH-PSLTFSTFFHMQREGV 114
+ + F+ R + A+ +F+++ + L+N +I+ G + ++ F + M GV
Sbjct: 69 RALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQF--YSRMVFAGV 126
Query: 115 YPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGA 174
D FTYPF++K+ G SSL + IHA V K GF D++V NSLI Y + G A
Sbjct: 127 KADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW--DA 184
Query: 175 MRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM------PER------------- 215
++F M ERD V+WNSMI G + GD + LF EM P+R
Sbjct: 185 EKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 216 ---------------------DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTM 254
D++ ++LD Y+K GE++ A +F+ M+Q NI++W+ M
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 255 VCGYSRAGDMDMARMLFDKCPEKN------------------------------------ 278
+ Y+R G + A + F K E+N
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPH 364
Query: 279 LVLWTTIISGYAEKGFMKEATVLYDKMEE------------------------------- 307
+VL T +I Y E G +K A V++D+M E
Sbjct: 365 MVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWD 424
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDA 367
+ L PD + SIL A AES L G++IHA + + R+ +T +LN+ + MYA CG L+
Sbjct: 425 SSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLED 484
Query: 368 AFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
A F+ + KD+VSWNS+I + VHG G ++ LFS M+ P+K TF LL AC+
Sbjct: 485 ARKCFNHIL-LKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACS 543
Query: 428 HAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVV 487
+G+VD+G YF SM++ YGI P IEHYGCM+DL+ R G+ A L MP P A +
Sbjct: 544 ISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIW 603
Query: 488 GTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNA 547
G+LL A R H D+ +A +E +FK+ + G + LL N+YA+AG W +V ++L M++
Sbjct: 604 GSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESK 663
Query: 548 GGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMI 584
G + S S++ FT D SH ++ IY+++
Sbjct: 664 GISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL 700
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 325 bits (834), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 307/578 (53%), Gaps = 40/578 (6%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
+H C + ++ +HAQ+L+ + VA +L++ SL + ++++F N +
Sbjct: 36 IHACKDTASLRHVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSIFRNSEERNPFVL 94
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
N+LIR N S + F M R GV PD T+PF+LK+ + L + +HA
Sbjct: 95 NALIRGLTENARFES-SVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATL 153
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
K D FV SL+D Y++ G L A
Sbjct: 154 KNFVDCDSFVRLSLVDMYAKTG---------------------------------QLKHA 180
Query: 206 FKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRA 261
F++F+E P+R ++ WN +++GY +A +M+ A LF M + N SWST++ GY +
Sbjct: 181 FQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDS 240
Query: 262 GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL 321
G+++ A+ LF+ PEKN+V WTT+I+G+++ G + A Y +M E GLKP++ + ++L
Sbjct: 241 GELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVL 300
Query: 322 TACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDL 381
+AC++SG LG G +IH + + + A +DMYAKCG LD A +FS M KD+
Sbjct: 301 SACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMN-HKDI 359
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNS 441
+SW +MI G+ VHG+ +A++ F M++ G +PD+ F+ +L AC ++ VD G N+F+S
Sbjct: 360 LSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDS 419
Query: 442 MEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVE 501
M Y I P ++HY ++DLL R G L EA EL+ +MP+ P+ L AC+ H
Sbjct: 420 MRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYR 479
Query: 502 LARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXX 561
A ++S++L +L P G++ L +A G+ +V RL ++ ++ G S I
Sbjct: 480 RAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELD 539
Query: 562 XXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPG 599
F+ D+SH + +I + ++ Q GY PG
Sbjct: 540 GQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPG 577
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/572 (32%), Positives = 309/572 (54%), Gaps = 13/572 (2%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+Q+H +LK+ + V L+A + + + SA VF+++ +V +NS+I + N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
G S F M G+ D T + C + L + +H+ K F +
Sbjct: 275 GLAEK-GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF 333
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
N+L+D YS+CG +D A +F M +R V++ SMI G R G A KLF+EM E
Sbjct: 334 CNTLLDMYSKCGD--LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 391
Query: 216 ----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMA 267
D+ + +L+ A+ +++ + + + L ++I + ++ Y++ G M A
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 268 RMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM-EEAGLKPDDGVLISILTACAE 326
++F + K+++ W TII GY++ + EA L++ + EE PD+ + +L ACA
Sbjct: 452 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 511
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS 386
G++IH + R + V N+ +DMYAKCG L A +F + K DLVSW
Sbjct: 512 LSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTV 570
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
MI G+G+HG G++A+ LF+ M G E D+ +F+ LL AC+H+GLVD+G +FN M
Sbjct: 571 MIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHEC 630
Query: 447 GIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARAL 506
I P +EHY C++D+L+R G L +A+ + +MP+ P+A + G LL CR+H+DV+LA +
Sbjct: 631 KIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKV 690
Query: 507 SEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXX 566
+E +F+L P + G + L++NIYA+A W V +R ++ G +K G S I
Sbjct: 691 AEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNI 750
Query: 567 FTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F D S+P++++I + ++ + + GY P
Sbjct: 751 FVAGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/403 (30%), Positives = 205/403 (50%), Gaps = 27/403 (6%)
Query: 50 DLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHM 109
D + KL ++ C + A VF++V +N L+ A +G S + F M
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF-SGSIGLFKKM 186
Query: 110 QREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV 169
GV D++T+ + K+ + S+ + +H + K GF E V NSL+ Y +
Sbjct: 187 MSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK--NQ 244
Query: 170 GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM----PERDMVSWNTMLD 225
+D A ++F M ERD ++WNS+I G V G + +F +M E D+ + ++
Sbjct: 245 RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFA 304
Query: 226 GYAKAGEMN-----------KAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKC 274
G A + ++ F DR +T++ YS+ GD+D A+ +F +
Sbjct: 305 GCADSRLISLGRAVHSIGVKACFSREDRFC-------NTLLDMYSKCGDLDSAKAVFREM 357
Query: 275 PEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGK 334
++++V +T++I+GYA +G EA L+++MEE G+ PD + ++L CA +L GK
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 335 KIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVH 394
++H ++ V NA +DMYAKCG + A +FS+M KD++SWN++I G+ +
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR-VKDIISWNTIIGGYSKN 476
Query: 395 GQGEKALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGR 436
+AL LF+ ++ E F PD+ T +L AC DKGR
Sbjct: 477 CYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/402 (27%), Positives = 195/402 (48%), Gaps = 15/402 (3%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
+ L + +H+ +KA ++ L+ +S C + SA VF ++ +V Y S+I
Sbjct: 312 ISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAG 371
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
+A G F M+ EG+ PD +T +L C L + +H +++
Sbjct: 372 YAREGLAGE-AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGF 430
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
DIFV N+L+D Y++CG + A +FS M +D ++WN++IGG + + A LF+
Sbjct: 431 DIFVSNALMDMYAKCG--SMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNL 488
Query: 212 MPER-----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS----WSTMVCGYSRAG 262
+ E D + +L A +K E+ +++ S +++V Y++ G
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCG 548
Query: 263 DMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILT 322
+ +A MLFD K+LV WT +I+GY GF KEA L+++M +AG++ D+ +S+L
Sbjct: 549 ALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLY 608
Query: 323 ACAESGMLGLGKKIHASVQ-RCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDL 381
AC+ SG++ G + ++ C+ + + +DM A+ G L A+ M D
Sbjct: 609 ACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDA 668
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL 423
W +++ G +H K E + V E EP+ + L+
Sbjct: 669 TIWGALLCGCRIH-HDVKLAEKVAEKVFE-LEPENTGYYVLM 708
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 192/385 (49%), Gaps = 15/385 (3%)
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
D T +L+ C SL + + + GF D + + L Y+ CG + A R
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGD--LKEASR 150
Query: 177 LFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM----PERDMVSWNTMLDGYAK--- 229
+F ++ A+ WN ++ L + GD G+ LF +M E D +++ + ++
Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210
Query: 230 --AGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIIS 287
GE F L + N + +++V Y + +D AR +FD+ E++++ W +II+
Sbjct: 211 VHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 269
Query: 288 GYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRC 347
GY G ++ ++ +M +G++ D ++S+ CA+S ++ LG+ +H+ + F
Sbjct: 270 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 329
Query: 348 STKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSM 407
+ N +DMY+KCG LD+A +F +M+ + +VS+ SMI G+ G +A++LF M
Sbjct: 330 EDRFCNTLLDMYSKCGDLDSAKAVFREMS-DRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388
Query: 408 VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGH 467
EG PD YT +L C L+D+G+ + K + I ++D+ ++ G
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDMYAKCGS 447
Query: 468 LEEAFELLRSMPVEPNAIVVGTLLG 492
++EA + M V+ + I T++G
Sbjct: 448 MQEAELVFSEMRVK-DIISWNTIIG 471
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 300/574 (52%), Gaps = 12/574 (2%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+Q+HA K + + L+ ++ C I +A++ F + NV L+N ++ A+ L
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
+ +F F MQ E + P+ +TYP +LK C L L + IH+ + K F + +V
Sbjct: 469 DDLRN-SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
+ LID Y++ G +D A + +D V+W +MI G + D A F +M +R
Sbjct: 528 CSVLIDMYAKLGK--LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR 585
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS--------WSTMVCGYSRAGDMDMA 267
+ S L A +A + ++ +S + +V YSR G ++ +
Sbjct: 586 GIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEES 645
Query: 268 RMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAES 327
+ F++ + + W ++SG+ + G +EA ++ +M G+ ++ S + A +E+
Sbjct: 646 YLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASET 705
Query: 328 GMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSM 387
+ GK++HA + + + T+V NA I MYAKCG + A F +++ K + VSWN++
Sbjct: 706 ANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAI 764
Query: 388 IHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYG 447
I+ + HG G +AL+ F M+H P+ T +G+L AC+H GLVDKG YF SM YG
Sbjct: 765 INAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYG 824
Query: 448 IVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALS 507
+ P+ EHY C++D+L+R G L A E ++ MP++P+A+V TLL AC +H ++E+ +
Sbjct: 825 LSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAA 884
Query: 508 EHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXF 567
HL +L P D + LLSN+YA + W R +MK G +K G S I F
Sbjct: 885 HHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSF 944
Query: 568 TVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGIY 601
V D +HP +D+I++ L ++GYV +
Sbjct: 945 YVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCF 978
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 233/476 (48%), Gaps = 17/476 (3%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L + +L++ +Q+H +LK D YV L++ + ++ SA ++F+ + +
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDA 354
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
YN+LI + G + F M +G+ PD+ T L+ AC+ +L Q +HA
Sbjct: 355 VTYNTLINGLSQCG-YGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
+ K GF + + +L++ Y++C I+ A+ F E + V WN M+ DL
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCA--DIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 203 DGAFKLFDEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDRML----QWNIISWSTM 254
+F++F +M ++V ++ ++L + G++ ++ +++ Q N S +
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
+ Y++ G +D A + + K++V WTT+I+GY + F +A + +M + G++ D+
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDE 591
Query: 315 GVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSK 374
L + ++ACA L G++IHA F NA + +Y++CG ++ ++ F +
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 375 MTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDK 434
T D ++WN+++ GF G E+AL +F M EG + + +TF + A + + +
Sbjct: 652 -TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 435 GRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA----FELLRSMPVEPNAIV 486
G+ + K G + E +I + ++ G + +A E+ V NAI+
Sbjct: 711 GKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAII 765
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 230/457 (50%), Gaps = 20/457 (4%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
+LD +++H+Q+LK L + ++ KL + + A VF+++P + +N +I+
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIK 159
Query: 91 AHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS-SLPLVQMIHAHVEKFGF 149
A + + F F M E V P+ T+ +L+AC G S + +V+ IHA + G
Sbjct: 160 ELA-SRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 150 YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
+ V N LID YSR G V D A R+F + +D +W +MI GL + A +LF
Sbjct: 219 RDSTVVCNPLIDLYSRNGFV--DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 210 DEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG-----YSR 260
+M ++ +++++L K + +L +L+ S T VC Y
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS-DTYVCNALVSLYFH 335
Query: 261 AGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISI 320
G++ A +F +++ V + T+I+G ++ G+ ++A L+ +M GL+PD L S+
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 321 LTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKD 380
+ AC+ G L G+++HA + F + K+ A +++YAKC ++ A F + T ++
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE-TEVEN 454
Query: 381 LVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFN 440
+V WN M+ +G+ + +F M E P++YT+ +L C G ++ G +
Sbjct: 455 VVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHS 514
Query: 441 SMEKVYGIVPQIEHYGC--MIDLLSRGGHLEEAFELL 475
+ K Q+ Y C +ID+ ++ G L+ A+++L
Sbjct: 515 QIIKTNF---QLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 104/231 (45%), Gaps = 15/231 (6%)
Query: 303 DKMEEAGLKPDDGVLISILTACAES-GMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAK 361
D +E G++P+ L +L C ++ G L G+K+H+ + + + + D Y
Sbjct: 73 DSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLF 132
Query: 362 CGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIG 421
G L AF +F +M ++ + +WN MI + LF MV E P++ TF G
Sbjct: 133 KGDLYGAFKVFDEMP-ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 191
Query: 422 LLCACTHAGLVDKGRNYFNSMEKVY------GIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
+L AC + F+ +E+++ G+ +IDL SR G ++ A +
Sbjct: 192 VLEACRGGSVA------FDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 476 RSMPVEPNAIVVGTLLGACRMHNDVELARALSE-HLFKLVPSDPGNFSLLS 525
+ ++ ++ V + G + + E R + ++ ++P+ S+LS
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/557 (31%), Positives = 299/557 (53%), Gaps = 16/557 (2%)
Query: 53 VAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQRE 112
+A LI ++ + A ++F+++P +V + ++I +A + ++ + + F M ++
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYA-SSNYNARAWECFHEMVKQ 105
Query: 113 GVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGID 172
G P+ FT +LK+C L ++H V K G ++V N++++ Y+ C V ++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS-VTME 164
Query: 173 GAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDM----------VSWNT 222
A +F ++ ++ VTW ++I G GD G K++ +M + V +
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASA 224
Query: 223 MLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLW 282
+D +++ + + R Q N+ ++++ Y R G + A+ F + +K+L+ W
Sbjct: 225 SIDSVTTGKQIHAS--VIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITW 282
Query: 283 TTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR 342
T+IS E+ EA +++ + E G P+ S++ ACA L G+++H + R
Sbjct: 283 NTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR 341
Query: 343 CRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALE 402
F + ++ NA IDMYAKCG + + +F ++ +++LVSW SM+ G+G HG G +A+E
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 403 LFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLL 462
LF MV G PD+ F+ +L AC HAGLV+KG YFN ME YGI P + Y C++DLL
Sbjct: 402 LFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLL 461
Query: 463 SRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVEL-ARALSEHLFKLVPSDPGNF 521
R G + EA+EL+ MP +P+ G +LGAC+ H L +R + + +L P G +
Sbjct: 462 GRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTY 521
Query: 522 SLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIY 581
+LS IYA G W++ A VR M+ G +K +G S I F V D P + +Y
Sbjct: 522 VMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVY 581
Query: 582 QMIGRLVHDLRQVGYVP 598
++G L+ + R+ GYVP
Sbjct: 582 SVLGLLIEETREAGYVP 598
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 38/308 (12%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
KQIHA ++K +L V ++ + C ++S A + F+++ ++ +N+LI L
Sbjct: 233 KQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI--SELE 290
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
S S F + +G P+ +T+ L+ AC ++L Q +H + + GF +++ +
Sbjct: 291 RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVEL 350
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAM-EERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
N+LID Y++CG I + R+F + + R+ V+W SM+ G G A +LFD+M
Sbjct: 351 ANALIDMYAKCG--NIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVS 408
Query: 215 R----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARML 270
D + + +L AG + K + F+ M Y D D
Sbjct: 409 SGIRPDRIVFMAVLSACRHAGLVEKGLKYFN-----------VMESEYGINPDRD----- 452
Query: 271 FDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGML 330
++ ++ G + EA Y+ +E KPD+ +IL AC
Sbjct: 453 ----------IYNCVVDLLGRAGKIGEA---YELVERMPFKPDESTWGAILGACKAHKHN 499
Query: 331 GLGKKIHA 338
GL ++ A
Sbjct: 500 GLISRLAA 507
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 204/697 (29%), Positives = 334/697 (47%), Gaps = 111/697 (15%)
Query: 10 PTWFSPRRLLEEKLCT------LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSL 63
P S LLE LCT +++ + + +H +++K+ L +Y+ L+ +S
Sbjct: 4 PVPLSLSTLLE--LCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSK 61
Query: 64 CRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG-------------SHPSLTFSTF---- 106
+ A +F+++P +N+++ A++ G S++++T
Sbjct: 62 TGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGY 121
Query: 107 -----FH--------MQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
+H M +EG+ P FT +L + + + +H+ + K G ++
Sbjct: 122 KNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNV 181
Query: 154 FVPNSLIDSYSRCGG----------------------------VG-IDGAMRLFSAMEER 184
V NSL++ Y++CG VG +D AM F M ER
Sbjct: 182 SVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER 241
Query: 185 DAVTWNSMIGGL-VRGGDLDGAFKLFDEMPERDMVS------------------------ 219
D VTWNSMI G RG DL A +F +M ++S
Sbjct: 242 DIVTWNSMISGFNQRGYDLR-ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 220 ----------------WNTMLDGYAKAGEMNKAFELFDR--MLQWNIISWSTMVCGYSRA 261
N ++ Y++ G + A L ++ I ++ ++ GY +
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 262 GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL 321
GDM+ A+ +F ++++V WT +I GY + G EA L+ M G +P+ L ++L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 322 TACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDL 381
+ + L GK+IH S + S V NA I MYAK G + +A F + ++D
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNS 441
VSW SMI HG E+ALELF +M+ EG PD T++G+ ACTHAGLV++GR YF+
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 442 MEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVE 501
M+ V I+P + HY CM+DL R G L+EA E + MP+EP+ + G+LL ACR+H +++
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 502 LARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXX 561
L + +E L L P + G +S L+N+Y+ G W A +R MK+ +K G S I
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 562 XXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F V D +HP+ ++IY + ++ +++++GYVP
Sbjct: 661 HKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVP 697
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 319 bits (817), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 290/559 (51%), Gaps = 13/559 (2%)
Query: 41 QLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPS 100
QL +++ L++ + R I A NVF +P NV + ++++ + G
Sbjct: 69 QLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGE 128
Query: 101 LTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLI 160
S F+ M + L+ + L M+ +D+ ++I
Sbjct: 129 AE-SLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPV--------KDVVASTNMI 179
Query: 161 DSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSW 220
R G V D A +F M ER+ VTW +MI G + +D A KLF+ MPE+ VSW
Sbjct: 180 GGLCREGRV--DEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSW 237
Query: 221 NTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
+ML GY +G + A E F+ M +I+ + M+ G+ G++ AR +FD +++
Sbjct: 238 TSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNA 297
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
W +I Y KGF EA L+ +M++ G++P LISIL+ CA L G+++HA +
Sbjct: 298 TWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357
Query: 341 QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
RC+F V + + MY KCG L A +F + + K D++ WNS+I G+ HG GE+A
Sbjct: 358 VRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-DIIMWNSIISGYASHGLGEEA 416
Query: 401 LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMID 460
L++F M G P+K T I +L AC++AG +++G F SME + + P +EHY C +D
Sbjct: 417 LKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVD 476
Query: 461 LLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGN 520
+L R G +++A EL+ SM ++P+A V G LLGAC+ H+ ++LA ++ LF+ P + G
Sbjct: 477 MLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGT 536
Query: 521 FSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFD-HSHPKSDD 579
+ LLS+I A W +VA VR M+ K G S I FT +HP+
Sbjct: 537 YVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAM 596
Query: 580 IYQMIGRLVHDLRQVGYVP 598
I M+ + LR+ GY P
Sbjct: 597 ILMMLEKTDGLLREAGYSP 615
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 170/380 (44%), Gaps = 28/380 (7%)
Query: 160 IDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVS 219
I SR G I+ A + F +++ + +WNS++ G G A +LFDEM ER++VS
Sbjct: 24 ISRLSRIGK--INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVS 81
Query: 220 WNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL 279
WN ++ GY K + +A +F+ M + N++SW+ MV GY + G + A LF + PE+N
Sbjct: 82 WNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNE 141
Query: 280 VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS--ILTACAESGMLGLGKKIH 337
V WT + G + G + +A LYD M P V+ S ++ G + + I
Sbjct: 142 VSWTVMFGGLIDDGRIDKARKLYDMM------PVKDVVASTNMIGGLCREGRVDEARLIF 195
Query: 338 ASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQG 397
++ T ++ Y + +D A +F M K + VSW SM+ G+ + G+
Sbjct: 196 DEMRERNVVTWTTMITG----YRQNNRVDVARKLFEVMPEKTE-VSWTSMLLGYTLSGRI 250
Query: 398 EKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC 457
E A E F M + +G G + K R F+ ME +
Sbjct: 251 EDAEEFFEVMPMKPVIACNAMIVGF----GEVGEISKARRVFDLMEDRDNAT-----WRG 301
Query: 458 MIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGACRMHNDVELARALSEHLFKL- 513
MI R G EA +L M V P+ + ++L C ++ R + HL +
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 514 VPSDPGNFSLLSNIYAQAGD 533
D S+L +Y + G+
Sbjct: 362 FDDDVYVASVLMTMYVKCGE 381
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
++L +Q+HA L++ D+YVA L+ + C + A VF++ ++ ++NS+I
Sbjct: 345 ASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSII 404
Query: 90 RAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPL-VQMIHAHVEKFG 148
+A +G F M G P+ T +L AC+ L +++ + KF
Sbjct: 405 SGYASHGLGEE-ALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFC 463
Query: 149 FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER-DAVTWNSMIGGLVRGGDLD---- 203
+ + +D R G V D AM L +M + DA W +++G LD
Sbjct: 464 VTPTVEHYSCTVDMLGRAGQV--DKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEV 521
Query: 204 GAFKLFDEMPE 214
A KLF+ P+
Sbjct: 522 AAKKLFENEPD 532
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 193/595 (32%), Positives = 303/595 (50%), Gaps = 75/595 (12%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
R +++ + +HA L+K+ D++V + F C + A VF ++P + +N+
Sbjct: 64 RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNA 123
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
++ +G H FS F M+ + PD+ T L+++ + SL L++ +HA +
Sbjct: 124 MLSGFCQSG-HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL 182
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
G + V N+ I +Y +CG +D A +F A++ D
Sbjct: 183 GVDVQVTVANTWISTYGKCGD--LDSAKLVFEAIDRGD---------------------- 218
Query: 208 LFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ---------------------- 245
R +VSWN+M Y+ GE AF L+ ML+
Sbjct: 219 -------RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPET 271
Query: 246 -----------------WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISG 288
+I + +T + YS++ D AR+LFD + V WT +ISG
Sbjct: 272 LTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 289 YAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKI--HASVQRCRFR 346
YAEKG M EA L+ M ++G KPD L+S+++ C + G L GK I A + C+ R
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCK-R 390
Query: 347 CSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSS 406
+ + NA IDMY+KCG + A IF T +K +V+W +MI G+ ++G +AL+LFS
Sbjct: 391 DNVMICNALIDMYSKCGSIHEARDIFDN-TPEKTVVTWTTMIAGYALNGIFLEALKLFSK 449
Query: 407 MVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGG 466
M+ ++P+ TF+ +L AC H+G ++KG YF+ M++VY I P ++HY CM+DLL R G
Sbjct: 450 MIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKG 509
Query: 467 HLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSN 526
LEEA EL+R+M +P+A + G LL AC++H +V++A +E LF L P + ++N
Sbjct: 510 KLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMAN 569
Query: 527 IYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIY 581
IYA AG W A +R MK +K G S I FTV +H H +++ IY
Sbjct: 570 IYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIY 624
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 121/423 (28%), Positives = 210/423 (49%), Gaps = 17/423 (4%)
Query: 81 NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
+V+ +N IR A+N + P + F M+R G P+NFT+PF+ KAC + + +M+
Sbjct: 16 SVNAWNLQIR-EAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMV 74
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
HAH+ K F+ D+FV + +D + +C V D A ++F M ERDA TWN+M+ G + G
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSV--DYAAKVFERMPERDATTWNAMLSGFCQSG 132
Query: 201 DLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM--------LQWNIISWS 252
D AF LF EM ++ + + ++ K+ +L + M + + +
Sbjct: 133 HTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVAN 192
Query: 253 TMVCGYSRAGDMDMARMLFDKCP--EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
T + Y + GD+D A+++F+ ++ +V W ++ Y+ G +A LY M
Sbjct: 193 TWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
KPD I++ +C L G+ IH+ + +N FI MY+K +A
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 371 IFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG 430
+F MT + VSW MI G+ G ++AL LF +M+ G +PD T + L+ C G
Sbjct: 313 LFDIMTSRT-CVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 431 LVDKGRNYFNSMEKVYGIV-PQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGT 489
++ G+ + ++ +YG + +ID+ S+ G + EA ++ + P E + T
Sbjct: 372 SLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTT 429
Query: 490 LLG 492
++
Sbjct: 430 MIA 432
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 314 bits (805), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 180/582 (30%), Positives = 305/582 (52%), Gaps = 17/582 (2%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
DL +Q+H ++K ++YV L+ ++ C + A F ++ PN +N+LI
Sbjct: 117 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 176
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
+ + + V D T+ LL P L++ +HA V K G
Sbjct: 177 FVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQH 236
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAME-ERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
+I + N++I SY+ CG V A R+F + +D ++WNSMI G + + AF+LF
Sbjct: 237 EITICNAMISSYADCGSVS--DAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFI 294
Query: 211 EMP----ERDMVSWNTMLDGYAKAGEMNKAF------ELFDRMLQWNIISWSTMVCGYSR 260
+M E D+ ++ +L A +GE ++ F + + L+ + + ++ Y +
Sbjct: 295 QMQRHWVETDIYTYTGLLS--ACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ 352
Query: 261 --AGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLI 318
G M+ A LF+ K+L+ W +II+G+A+KG ++A + + + +K DD
Sbjct: 353 FPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFS 412
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
++L +C++ L LG++IHA + F + V+++ I MY+KCG +++A F +++ K
Sbjct: 413 ALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSK 472
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY 438
V+WN+MI G+ HG G+ +L+LFS M ++ + D TF +L AC+H GL+ +G
Sbjct: 473 HSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
N ME VY I P++EHY +DLL R G + +A EL+ SMP+ P+ +V+ T LG CR
Sbjct: 533 LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACG 592
Query: 499 DVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
++E+A ++ HL ++ P D + LS++Y+ W ASV+ MK G +K G S I
Sbjct: 593 EIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWI 652
Query: 559 XXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGI 600
F D S+P DIY MI L +++ + G+
Sbjct: 653 EIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQWLDSDNGV 694
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 219/467 (46%), Gaps = 22/467 (4%)
Query: 39 HAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSH 98
H +K D+YV+ +++ ++ + A +F+++P + +N++I + G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 99 PSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNS 158
+ F M+R G D +++ LLK L + +H V K G+ +++V +S
Sbjct: 83 ED-AWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 159 LIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMV 218
L+D Y++C V + A F + E ++V+WN++I G V+ D+ AF L M + V
Sbjct: 142 LVDMYAKCERV--EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAV 199
Query: 219 SWN--------TMLDGYAKAGEMNKAFELFDRM-LQWNIISWSTMVCGYSRAGDMDMARM 269
+ + T+LD + + ++ LQ I + M+ Y+ G + A+
Sbjct: 200 TMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 270 LFDKC-PEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG 328
+FD K+L+ W ++I+G+++ + A L+ +M+ ++ D +L+AC+
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEE 319
Query: 329 MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAK--CGCLDAAFGIFSKMTGKKDLVSWNS 386
GK +H V + T NA I MY + G ++ A +F + KDL+SWNS
Sbjct: 320 HQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS-KDLISWNS 378
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
+I GF G E A++ FS + + D Y F LL +C+ + G+ +++
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQ-IHALATKS 437
Query: 447 GIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM-----PVEPNAIVVG 488
G V +I + S+ G +E A + + + V NA+++G
Sbjct: 438 GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILG 484
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/381 (31%), Positives = 181/381 (47%), Gaps = 46/381 (12%)
Query: 137 VQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGL 196
+ + H + K G DI+V N ++DSY + G +G A LF M +RD+V+WN+MI G
Sbjct: 19 LSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGY--ANMLFDEMPKRDSVSWNTMISGY 76
Query: 197 VRGGDLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELFDRM--------L 244
G L+ A+ LF M + D S++ +L G A K F+L +++
Sbjct: 77 TSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASV----KRFDLGEQVHGLVIKGGY 132
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
+ N+ S++V Y++ ++ A F + E N V W +I+G+ + +K A L
Sbjct: 133 ECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGL 192
Query: 305 ME-EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
ME +A + D G +LT + L K++HA V + + + NA I YA CG
Sbjct: 193 MEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCG 252
Query: 364 CLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL 423
+ A +F + G KDL+SWNSMI GF H E A ELF M E D YT+ GLL
Sbjct: 253 SVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLL 312
Query: 424 CACT-----------HAGLVDKG----RNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHL 468
AC+ H ++ KG + N++ +Y P G M D LS
Sbjct: 313 SACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPT----GTMEDALS----- 363
Query: 469 EEAFELLRSMP-VEPNAIVVG 488
FE L+S + N+I+ G
Sbjct: 364 --LFESLKSKDLISWNSIITG 382
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 17/174 (9%)
Query: 337 HASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQ 396
H +C V N +D Y K G L A +F +M K+D VSWN+MI G+ G+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMP-KRDSVSWNTMISGYTSCGK 81
Query: 397 GEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYG 456
E A LF+ M G + D Y+F LL G+ R F+ E+V+G+V + Y
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLL-----KGIASVKR--FDLGEQVHGLVIK-GGYE 133
Query: 457 C-------MIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
C ++D+ ++ +E+AFE + + EPN++ L+ D++ A
Sbjct: 134 CNVYVGSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTA 186
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 184/595 (30%), Positives = 310/595 (52%), Gaps = 47/595 (7%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
+LV+ I++ + + Q + LI I+ A +F+ +P +V + +I
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEW----LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITG 86
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
+ G F R + T+ ++ L + +M+ + +
Sbjct: 87 YIKLGDMREA--RELF--DRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPE----R 138
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
++ N++ID Y++ G ID A+ LF M ER+ V+WNSM+ LV+ G +D A LF+
Sbjct: 139 NVVSWNTMIDGYAQSGR--IDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFER 196
Query: 212 MPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYS------------ 259
MP RD+VSW M+DG AK G++++A LFD M + NIISW+ M+ GY+
Sbjct: 197 MPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLF 256
Query: 260 -------------------RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATV 300
R +M+ A LFD+ PEKN++ WTT+I+GY E +EA
Sbjct: 257 QVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALN 316
Query: 301 LYDKM-EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMY 359
++ KM + +KP+ G +SIL+AC++ L G++IH + + + + V +A ++MY
Sbjct: 317 VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMY 376
Query: 360 AKCGCLDAAFGIFSK-MTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
+K G L AA +F + ++DL+SWNSMI + HG G++A+E+++ M GF+P T
Sbjct: 377 SKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVT 436
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
++ LL AC+HAGLV+KG +F + + + + EHY C++DL R G L++ +
Sbjct: 437 YLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCD 496
Query: 479 PVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVA 538
+ G +L AC +HN+V +A+ + + + + D G + L+SNIYA G A
Sbjct: 497 DARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAA 556
Query: 539 SVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQ 593
+R++MK G +K G S + F V D SHP+ + + ++ L + +R+
Sbjct: 557 EMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKMRK 611
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 199/625 (31%), Positives = 325/625 (52%), Gaps = 58/625 (9%)
Query: 17 RLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLI--AAFSLCRHISSAVNVF 74
+L + L L C++ + KQ+ AQ+++ +L D + +LI +A + ++ A +F
Sbjct: 32 QLNHQSLVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLF 91
Query: 75 -NQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSS 133
N P PNV +YN++I A + S + F + M R V PD T+ +L+KA S
Sbjct: 92 LNFTPNPNVFVYNTMISAVS---SSKNECFGLYSSMIRHRVSPDRQTFLYLMKA---SSF 145
Query: 134 LPLVQMIHAHVEKFGFYE-DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
L V+ IH H+ G ++ NSL+ Y G G+ A ++F+ M D ++N M
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGV--AEKVFARMPHPDVSSFNVM 203
Query: 193 IGGLVRGGDLDGAFKLFDEM------PER------------------------------- 215
I G + G A KL+ +M P+
Sbjct: 204 IVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGP 263
Query: 216 ----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLF 271
+++ N +LD Y K E A FD M + ++ SW+TMV G+ R GDM+ A+ +F
Sbjct: 264 VYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVF 323
Query: 272 DKCPEKNLVLWTTIISGYAEKGFMKEAT--VLYDKMEEAGLKPDDGVLISILTACAESGM 329
D+ P+++LV W +++ GY++KG + + Y+ +KPD ++S+++ A +G
Sbjct: 324 DQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGE 383
Query: 330 LGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIH 389
L G+ +H V R + + + +A IDMY KCG ++ AF +F T +KD+ W SMI
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT-EKDVALWTSMIT 442
Query: 390 GFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIV 449
G HG G++AL+LF M EG P+ T + +L AC+H+GLV++G + FN M+ +G
Sbjct: 443 GLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFD 502
Query: 450 PQIEHYGCMIDLLSRGGHLEEAFELL-RSMPVEPNAIVVGTLLGACRMHNDVELARALSE 508
P+ EHYG ++DLL R G +EEA +++ + MP+ P+ + G++L ACR D+E A
Sbjct: 503 PETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALT 562
Query: 509 HLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFT 568
L KL P G + LLSNIYA G W R M+N G +K +G SS+ F
Sbjct: 563 ELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFV 622
Query: 569 VFD-HSHPKSDDIYQMIGRLVHDLR 592
+ +HP+ +I +++ L ++++
Sbjct: 623 AAEKQNHPRWTEIKRILQHLYNEMK 647
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 188/584 (32%), Positives = 305/584 (52%), Gaps = 19/584 (3%)
Query: 25 TLHRCSNLDLV---KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
L CS L + KQIHA +L+ L D + LI ++ C + +A +FN +P N
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
+ + +L+ + N H F M + G+ PD + +L +C +L +H
Sbjct: 315 IISWTTLLSGYKQNALHKE-AMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVH 373
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG- 200
A+ K D +V NSLID Y++C + A ++F D V +N+MI G R G
Sbjct: 374 AYTIKANLGNDSYVTNSLIDMYAKCDC--LTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 201 --DLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIIS 250
+L A +F +M R ++++ ++L A + + ++ M ++ +I +
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 251 WSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
S ++ YS + +R++FD+ K+LV+W ++ +GY ++ +EA L+ +++ +
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
+PD+ +++TA + LG++ H + + C+ + NA +DMYAKCG + A
Sbjct: 552 RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHK 611
Query: 371 IFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG 430
F +D+V WNS+I + HG+G+KAL++ M+ EG EP+ TF+G+L AC+HAG
Sbjct: 612 AFDS-AASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAG 670
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTL 490
LV+ G F M + +GI P+ EHY CM+ LL R G L +A EL+ MP +P AIV +L
Sbjct: 671 LVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 491 LGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQ 550
L C +VELA +E P D G+F++LSNIYA G W VR +MK G
Sbjct: 730 LSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVV 789
Query: 551 KPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQV 594
K G S I F D SH K++ IY+++ L+ +R V
Sbjct: 790 KEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIRGV 833
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 145/520 (27%), Positives = 242/520 (46%), Gaps = 27/520 (5%)
Query: 38 IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGS 97
+H Q++ L D Y++ LI +S + A VF ++P N+ +++++ A +G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 98 HPS--LTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLP--LVQMIHAHVEKFGFYEDI 153
+ + F F+ +++ P+ + ++AC+G +V + + + K GF D+
Sbjct: 126 YEESLVVFLEFWRTRKDS--PNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
+V LID Y + G ID A +F A+ E+ VTW +MI G V+ G + +LF ++
Sbjct: 184 YVGTLLIDFYLKDG--NIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFE--------LFDRMLQWNIISWSTMVCGYSRAGDMD 265
E ++V +L A + E + L+ + + ++ Y + G +
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 266 MARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA 325
A LF+ P KN++ WTT++SGY + KEA L+ M + GLKPD SILT+CA
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361
Query: 326 ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
LG G ++HA + + V N+ IDMYAKC CL A +F + D+V +N
Sbjct: 362 SLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFD-IFAAADVVLFN 420
Query: 386 SMIHGF---GVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSM 442
+MI G+ G + +AL +F M P TF+ LL A + + M
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480
Query: 443 EKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVEL 502
K YG+ I +ID+ S L+++ + M V+ I G + + E
Sbjct: 481 FK-YGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEA 539
Query: 503 ARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRL 542
E +L P F+ +N+ AG N+ASV+L
Sbjct: 540 LNLFLE--LQLSRERPDEFT-FANMVTAAG---NLASVQL 573
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 159/310 (51%), Gaps = 26/310 (8%)
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLV 197
++H + +G D ++ N LI+ YSR GG+ A ++F M ER+ V+W++M+
Sbjct: 64 NVVHGQIIVWGLELDTYLSNILINLYSRAGGMVY--ARKVFEKMPERNLVSWSTMVSACN 121
Query: 198 RGGDLDGAFKLF--------DEMPERDMVSWNTMLDGYAKAGEMNKAFEL--------FD 241
G + + +F D E + S+ G G F+L FD
Sbjct: 122 HHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRW-MVFQLQSFLVKSGFD 180
Query: 242 RMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVL 301
R ++ + ++ Y + G++D AR++FD PEK+ V WTT+ISG + G + L
Sbjct: 181 R----DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236
Query: 302 YDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAK 361
+ ++ E + PD +L ++L+AC+ L GK+IHA + R ++N ID Y K
Sbjct: 237 FYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVK 296
Query: 362 CGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIG 421
CG + AA +F+ M K+++SW +++ G+ + ++A+ELF+SM G +PD Y
Sbjct: 297 CGRVIAAHKLFNGMPN-KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSS 355
Query: 422 LL--CACTHA 429
+L CA HA
Sbjct: 356 ILTSCASLHA 365
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 184/531 (34%), Positives = 290/531 (54%), Gaps = 54/531 (10%)
Query: 71 VNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTG 130
+N+ + H+ N LI+ H GS P + ++R GVY + P +L+AC
Sbjct: 1 MNLEEHLSLGEFHVSN-LIKNHISRGS-PIQALVLYGGIRRRGVYFPGWV-PLILRACAC 57
Query: 131 P-SSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTW 189
+ L +++H+ KFG D+ V +SLI Y +CG V A ++F M ER+ TW
Sbjct: 58 VVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCV--VSARKVFDEMPERNVATW 115
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPE-RDMVSWNTMLDGYAKAGEMNKAFELFDRM----- 243
N+MIGG + GD A LF+E+ R+ V+W M+ GY K E+ KA ELF+RM
Sbjct: 116 NAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK 175
Query: 244 --LQWNII--------------------------SWSTMVCGYSRAGDMDMARMLFDKCP 275
W+++ WS M+ GY R GD+ AR +F +
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 276 EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKK 335
++LV+W T+I+GYA+ G+ +A + M+ G +PD + SIL+ACA+SG L +G++
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 336 IHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHG 395
+H+ + + V NA IDMYAKCG L+ A +F ++ + + NSMI +HG
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESIS-VRSVACCNSMISCLAIHG 354
Query: 396 QGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHY 455
+G++ALE+FS+M +PD+ TFI +L AC H G + +G F+ M K + P ++H+
Sbjct: 355 KGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHF 413
Query: 456 GCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVP 515
GC+I LL R G L+EA+ L++ M V+PN V+G LLGAC++H D E+A E + K++
Sbjct: 414 GCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMA----EQVMKIIE 469
Query: 516 S--------DPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
+ + + +SN+YA W ++R++M+ G +K G SS+
Sbjct: 470 TAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 293/568 (51%), Gaps = 10/568 (1%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q+H ++K L + + V+ LI + C ++ A +F++ +V +NS+I +A NG
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANG 274
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
F+ M+ V ++ ++K C L + +H V K+GF D +
Sbjct: 275 LDLE-ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAME-ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
+L+ +YS+C + A+RLF + + V+W +MI G ++ + A LF EM +
Sbjct: 334 TALMVAYSKC--TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWST----MVCGYSRAGDMDMARMLF 271
+ A + E+ ++++ N ST ++ Y + G ++ A +F
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 272 DKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGM-L 330
+K++V W+ +++GYA+ G + A ++ ++ + G+KP++ SIL CA + +
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 331 GLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHG 390
G GK+ H + R S V +A + MYAK G +++A +F K +KDLVSWNSMI G
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF-KRQREKDLVSWNSMISG 570
Query: 391 FGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP 450
+ HGQ KAL++F M + D TFIG+ ACTHAGLV++G YF+ M + I P
Sbjct: 571 YAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAP 630
Query: 451 QIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHL 510
EH CM+DL SR G LE+A +++ +MP + + T+L ACR+H EL R +E +
Sbjct: 631 TKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKI 690
Query: 511 FKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVF 570
+ P D + LLSN+YA++GDW A VR M +K G S I F
Sbjct: 691 IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 750
Query: 571 DHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
D SHP D IY + L L+ +GY P
Sbjct: 751 DRSHPLKDQIYMKLEDLSTRLKDLGYEP 778
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 220/462 (47%), Gaps = 41/462 (8%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+Q+H Q +K D+ V L+ + + VF+++ NV + +LI +A N
Sbjct: 113 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
+ + + F MQ EG P++FT+ L +H V K G + I V
Sbjct: 173 SMNDEV-LTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG-DLDGAFKLFDEMP- 213
NSLI+ Y +CG V A LF E + VTWNSMI G G DL+ A +F M
Sbjct: 232 SNSLINLYLKCGNV--RKARILFDKTEVKSVVTWNSMISGYAANGLDLE-ALGMFYSMRL 288
Query: 214 ---ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISW---------STMVCGYSRA 261
S+ +++ A E+ F L +++ + + ++ YS+
Sbjct: 289 NYVRLSESSFASVIKLCANLKELR-----FTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 262 GDM-DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISI 320
M D R+ + N+V WT +ISG+ + +EA L+ +M+ G++P++ I
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 321 LTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKD 380
LTA + ++HA V + + S+ V A +D Y K G ++ A +FS + KD
Sbjct: 404 LTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI-DDKD 458
Query: 381 LVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL--CACTHAGLVDKGRNY 438
+V+W++M+ G+ G+ E A+++F + G +P+++TF +L CA T+A + +G+ +
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM-GQGKQF 517
Query: 439 FNSMEKVYGIVPQIEHYGC----MIDLLSRGGHLEEAFELLR 476
+ I +++ C ++ + ++ G++E A E+ +
Sbjct: 518 HG-----FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 209/467 (44%), Gaps = 40/467 (8%)
Query: 69 SAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKAC 128
+A N+F++ P + Y SL+ + +G F ++ R G+ D + +LK
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAK-RLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 129 TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVT 188
+ +H KFGF +D+ V SL+D+Y + G ++F M+ER+ VT
Sbjct: 104 ATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK--GSNFKDGRKVFDEMKERNVVT 161
Query: 189 WNSMIGGLVRGGDLDGAFKLF----DEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM- 243
W ++I G R D LF +E + + ++ L A+ G + ++ +
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 244 ---LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATV 300
L I ++++ Y + G++ AR+LFDK K++V W ++ISGYA G EA
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 301 LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYA 360
++ M ++ + S++ CA L +++H SV + F + A + Y+
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 361 KCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFI 420
KC + A +F ++ ++VSW +MI GF + E+A++LFS M +G P+++T+
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYS 401
Query: 421 GLLCAC-------THAGLV----DKGRNYFNSMEKVYGIVPQIEH--------------- 454
+L A HA +V ++ ++ Y + ++E
Sbjct: 402 VILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 455 YGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGACRMHN 498
+ M+ ++ G E A ++ + ++PN ++L C N
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 198/400 (49%), Gaps = 28/400 (7%)
Query: 17 RLLEEKLCTLHR-CSNLD---LVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVN 72
RL E ++ + C+NL +Q+H ++K D + L+ A+S C + A+
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 73 VFNQVP-YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGP 131
+F ++ NV + ++I N F M+R+GV P+ FTY +L A
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEE-AVDLFSEMKRKGVRPNEFTYSVILTA---- 406
Query: 132 SSLPLV--QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTW 189
LP++ +HA V K + V +L+D+Y + G V + A ++FS ++++D V W
Sbjct: 407 --LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKV--EEAAKVFSGIDDKDIVAW 462
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKA------GEMNKAFEL 239
++M+ G + G+ + A K+F E+ + + +++++L+ A G+ F +
Sbjct: 463 SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAI 522
Query: 240 FDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEAT 299
R L ++ S ++ Y++ G+++ A +F + EK+LV W ++ISGYA+ G +A
Sbjct: 523 KSR-LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKAL 581
Query: 300 VLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKK-IHASVQRCRFRCSTKVLNAFIDM 358
++ +M++ +K D I + AC +G++ G+K V+ C+ + + + +D+
Sbjct: 582 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDL 641
Query: 359 YAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
Y++ G L+ A + M W +++ VH + E
Sbjct: 642 YSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTE 681
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 191/568 (33%), Positives = 302/568 (53%), Gaps = 12/568 (2%)
Query: 34 LVKQIHAQLLKAHLHQ-DLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAH 92
L K+IHA +LK+ H +LYV LIA ++ C + A + Q+ +V +NSLI+ +
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 93 ALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYED 152
N + F M G D + ++ A S+L +HA+V K G+ +
Sbjct: 362 VQNLMYKE-ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 420
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
+ V N+LID YS+C G R F M ++D ++W ++I G + A +LF ++
Sbjct: 421 LQVGNTLIDMYSKCNLTCYMG--RAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 213 PERDMVSWNTMLDGYAKAGEMNKAF----ELFDRMLQ---WNIISWSTMVCGYSRAGDMD 265
++ M +L +A + K+ E+ +L+ + + + +V Y + +M
Sbjct: 479 AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMG 538
Query: 266 MARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA 325
A +F+ K++V WT++IS A G EA L+ +M E GL D L+ IL+A A
Sbjct: 539 YATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAA 598
Query: 326 ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
L G++IH + R F + A +DMYA CG L +A +F ++ +K L+ +
Sbjct: 599 SLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE-RKGLLQYT 657
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
SMI+ +G+HG G+ A+ELF M HE PD +F+ LL AC+HAGL+D+GR + ME
Sbjct: 658 SMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHE 717
Query: 446 YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARA 505
Y + P EHY C++D+L R + EAFE ++ M EP A V LL ACR H++ E+
Sbjct: 718 YELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEI 777
Query: 506 LSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXX 565
++ L +L P +PGN L+SN++A+ G W +V VR +MK +G +K G S I
Sbjct: 778 AAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVH 837
Query: 566 XFTVFDHSHPKSDDIYQMIGRLVHDLRQ 593
FT D SHP+S +IY+ + + L +
Sbjct: 838 KFTARDKSHPESKEIYEKLSEVTRKLER 865
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 114/403 (28%), Positives = 194/403 (48%), Gaps = 15/403 (3%)
Query: 36 KQIHAQLLKAHLHQDL-YVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
+Q+H+++ K +L ++A KL+ + C + A VF+++P +N++I A+
Sbjct: 100 RQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
NG P+ + +++M+ EGV ++P LLKAC + +H+ + K G++ F
Sbjct: 160 NG-EPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEER-DAVTWNSMIGGLVRGGDLDGAFKLFDEM- 212
+ N+L+ Y++ + A RLF +E+ DAV WNS++ G +LF EM
Sbjct: 219 IVNALVSMYAK--NDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276
Query: 213 ------PERDMVSWNTMLDG--YAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDM 264
+VS T DG YAK G+ A L + + ++ Y+R G M
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKM 336
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
A + + ++V W ++I GY + KEA + M AG K D+ + SI+ A
Sbjct: 337 PQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAAS 396
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
L G ++HA V + + + +V N IDMY+KC F +M KDL+SW
Sbjct: 397 GRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMH-DKDLISW 455
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
++I G+ + +ALELF + + E D+ +L A +
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 13/380 (3%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
R SNL ++HA ++K +L V LI +S C F ++ ++ + +
Sbjct: 398 RLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTT 457
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
+I +A N H F + ++ + D +L+A + S+ +V+ IH H+ +
Sbjct: 458 VIAGYAQNDCHVE-ALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK 516
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
G D + N L+D Y +C +G A R+F +++ +D V+W SMI G+ A +
Sbjct: 517 GLL-DTVIQNELVDVYGKCRNMGY--ATRVFESIKGKDVVSWTSMISSSALNGNESEAVE 573
Query: 208 LFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG----YS 259
LF M E D V+ +L A +NK E+ +L+ ++ Y+
Sbjct: 574 LFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYA 633
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
GD+ A+ +FD+ K L+ +T++I+ Y G K A L+DKM + PD ++
Sbjct: 634 CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693
Query: 320 ILTACAESGMLGLGKKIHASVQ-RCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
+L AC+ +G+L G+ ++ + +DM + C+ AF M +
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753
Query: 379 KDLVSWNSMIHGFGVHGQGE 398
W +++ H + E
Sbjct: 754 PTAEVWCALLAACRSHSEKE 773
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 108/234 (46%), Gaps = 3/234 (1%)
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
+V Y + G +D A +FD+ P++ W T+I Y G A LY M G+
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 314 DGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFS 373
++L ACA+ + G ++H+ + + + + ++NA + MYAK L AA +F
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 374 KMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVD 433
K D V WNS++ + G+ + LELF M G P+ YT + L AC
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 434 KGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVV 487
G+ S+ K ++ +I + +R G + +A +LR M NA VV
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM---NNADVV 352
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 194/635 (30%), Positives = 307/635 (48%), Gaps = 76/635 (11%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
VK IH +++A + + ++ ++ A++L + + A VF+++P PN+ +N+L+ A++
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84
Query: 95 NGSHPSLTFSTFFHM-QREGV----------------------------YPDNFTYPFL- 124
G + STF + R+GV + N T L
Sbjct: 85 AGLISEME-STFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 125 --LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
LK + + L + IH V K GF + V + L+ Y+ G I A ++F ++
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGC--ISDAKKVFYGLD 201
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDR 242
+R+ V +NS++GGL+ G ++ A +LF M E+D VSW M+ G A+ G +A E F
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 243 M---------------------------------------LQWNIISWSTMVCGYSRAGD 263
M Q +I S ++ Y +
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+ A+ +FD+ +KN+V WT ++ GY + G +EA ++ M+ +G+ PD L ++A
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
CA L G + H V N+ + +Y KCG +D + +F++M +D VS
Sbjct: 381 CANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN-VRDAVS 439
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
W +M+ + G+ + ++LF MV G +PD T G++ AC+ AGLV+KG+ YF M
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT 499
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
YGIVP I HY CMIDL SR G LEEA + MP P+AI TLL ACR ++E+
Sbjct: 500 SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Query: 504 RALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXX 563
+ +E L +L P P ++LLS+IYA G W +VA +R M+ +K G S I
Sbjct: 560 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGK 619
Query: 564 XXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F+ D S P D IY + L + + GY P
Sbjct: 620 LHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKP 654
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/521 (22%), Positives = 226/521 (43%), Gaps = 113/521 (21%)
Query: 121 YPFLLKACTG---PSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRL 177
Y +K C G + V+MIH ++ + Y + F+ N+++ +Y+ A R+
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTY--ARRV 63
Query: 178 FSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAF 237
F + + + +WN+++ + G + F+++P+RD V+WN +++GY+ +G + A
Sbjct: 64 FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAV 123
Query: 238 ELFDRML----------------------------------------QWNIISWSTMVCG 257
+ ++ M+ + ++ S ++
Sbjct: 124 KAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYM 183
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTII------------------------------S 287
Y+ G + A+ +F ++N V++ +++
Sbjct: 184 YANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIK 243
Query: 288 GYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRC 347
G A+ G KEA + +M+ GLK D S+L AC G + GK+IHA + R F+
Sbjct: 244 GLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQD 303
Query: 348 STKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSM 407
V +A IDMY KC CL A +F +M +K++VSW +M+ G+G G+ E+A+++F M
Sbjct: 304 HIYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362
Query: 408 VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYF---------------NSMEKVYGIVPQI 452
G +PD YT + AC + +++G + NS+ +YG I
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422
Query: 453 E---------------HYGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIVVGTLLGAC 494
+ + M+ ++ G E +L M ++P+ + + ++ AC
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482
Query: 495 RMHNDVELAR---ALSEHLFKLVPSDPGNFSLLSNIYAQAG 532
VE + L + +VPS G++S + ++++++G
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPS-IGHYSCMIDLFSRSG 522
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 308 bits (789), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 280/511 (54%), Gaps = 44/511 (8%)
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
+L ++ IH HV + G + ++ LI + ++ G A R+ ++ R+ W ++
Sbjct: 61 NLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAV 120
Query: 193 IGGLVRGGDLDGAFKLFDEMPERDM--VSW------------------------------ 220
I G G D A ++ M + ++ VS+
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRG 180
Query: 221 -------NTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDK 273
NTM+D Y K ++ A ++FD M + ++ISW+ ++ Y+R G+M+ A LF+
Sbjct: 181 FCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFES 240
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
P K++V WT +++G+A+ +EA +D+ME++G++ D+ + ++ACA+ G
Sbjct: 241 LPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYA 300
Query: 334 KKIHASVQRCRFRCSTKVL--NAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGF 391
+ Q+ + S V+ +A IDMY+KCG ++ A +F M K ++ +++SMI G
Sbjct: 301 DRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNK-NVFTYSSMILGL 359
Query: 392 GVHGQGEKALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP 450
HG+ ++AL LF MV + +P+ TF+G L AC+H+GLVD+GR F+SM + +G+ P
Sbjct: 360 ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQP 419
Query: 451 QIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHL 510
+HY CM+DLL R G L+EA EL+++M VEP+ V G LLGACR+HN+ E+A +EHL
Sbjct: 420 TRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHL 479
Query: 511 FKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQK-PSGASSIXXXXXXXXFTV 569
F+L P GN+ LLSN+YA AGDW V VR +K G +K P+ + + F
Sbjct: 480 FELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFP 539
Query: 570 FDHSHPKSDDIYQMIGRLVHDLRQVGYVPGI 600
+ +HP S+ I + LV L +GY P +
Sbjct: 540 GNLNHPMSNKIQDKLEELVERLTVLGYQPDL 570
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 203/443 (45%), Gaps = 50/443 (11%)
Query: 18 LLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSL--CRHISSAVNVFN 75
L+ + L C NL+ +KQIH +L+ L Q Y+ KLI + A V
Sbjct: 48 LVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 76 QVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLP 135
V + N L+ ++IR +A+ G + + M++E + P +FT+ LLKAC L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDE-AIAMYGCMRKEEITPVSFTFSALLKACGTMKDLN 166
Query: 136 LVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGG 195
L + HA + + ++V N++ID Y +C ID A ++F M ERD ++W +I
Sbjct: 167 LGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCES--IDCARKVFDEMPERDVISWTELIAA 224
Query: 196 LVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMV 255
R G+++ A +LF+ +P +DMV+W M+ G+A+ + +A E FDRM + I + V
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 256 CG-----------------------------------------YSRAGDMDMARMLFDKC 274
G YS+ G+++ A +F
Sbjct: 285 AGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Query: 275 PEKNLVLWTTIISGYAEKGFMKEATVLYDKM-EEAGLKPDDGVLISILTACAESGMLGLG 333
KN+ ++++I G A G +EA L+ M + +KP+ + L AC+ SG++ G
Sbjct: 345 NNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQG 404
Query: 334 KKIHASV-QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFG 392
+++ S+ Q + + +D+ + G L A + M+ + W +++
Sbjct: 405 RQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACR 464
Query: 393 VHGQGEKALELFSSMVHEGFEPD 415
+H E A E+ + + E EPD
Sbjct: 465 IHNNPEIA-EIAAEHLFE-LEPD 485
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 190/591 (32%), Positives = 309/591 (52%), Gaps = 18/591 (3%)
Query: 24 CTLHRCSN---LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYP 80
C L C++ +DL Q+H ++ + + + + L++ +S C A +F +
Sbjct: 244 CVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA 303
Query: 81 NVHLYNSLIRAHALNG-SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
+ +N +I + +G SLTF F+ M GV PD T+ LL + + +L +
Sbjct: 304 DTVTWNCMISGYVQSGLMEESLTF--FYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQ 361
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
IH ++ + DIF+ ++LID+Y +C GV + A +FS D V + +MI G +
Sbjct: 362 IHCYIMRHSISLDIFLTSALIDAYFKCRGVSM--AQNIFSQCNSVDVVVFTAMISGYLHN 419
Query: 200 GDLDGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMV 255
G + ++F + + + ++ ++L + EL +++ + +
Sbjct: 420 GLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIG 479
Query: 256 CG----YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
C Y++ G M++A +F++ ++++V W ++I+ A+ A ++ +M +G+
Sbjct: 480 CAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGIC 539
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
D + + L+ACA GK IH + + + IDMYAKCG L AA +
Sbjct: 540 YDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNV 599
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE-GFEPDKYTFIGLLCACTHAG 430
F M +K++VSWNS+I G HG+ + +L LF MV + G PD+ TF+ ++ +C H G
Sbjct: 600 FKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVG 658
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTL 490
VD+G +F SM + YGI PQ EHY C++DL R G L EA+E ++SMP P+A V GTL
Sbjct: 659 DVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTL 718
Query: 491 LGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQ 550
LGACR+H +VELA S L L PS+ G + L+SN +A A +W +V VR MK Q
Sbjct: 719 LGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQ 778
Query: 551 KPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGIY 601
K G S I F D +HP+S IY ++ L+ +LR GY+P Y
Sbjct: 779 KIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEGYIPQPY 829
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/484 (25%), Positives = 227/484 (46%), Gaps = 14/484 (2%)
Query: 52 YVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQR 111
+VA LI A+ I +F++V + ++N ++ +A G+ S+ F M+
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV-IKGFSVMRM 232
Query: 112 EGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGI 171
+ + P+ T+ +L C + L +H V G + + NSL+ YS+CG
Sbjct: 233 DQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR--F 290
Query: 172 DGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGY 227
D A +LF M D VTWN MI G V+ G ++ + F EM D ++++++L
Sbjct: 291 DDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV 350
Query: 228 AKAGEMNKAFEL----FDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWT 283
+K + ++ + +I S ++ Y + + MA+ +F +C ++V++T
Sbjct: 351 SKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFT 410
Query: 284 TIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRC 343
+ISGY G ++ ++ + + + P++ L+SIL L LG+++H + +
Sbjct: 411 AMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKK 470
Query: 344 RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALEL 403
F + A IDMYAKCG ++ A+ IF +++ K+D+VSWNSMI A+++
Sbjct: 471 GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 404 FSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLS 463
F M G D + L AC + G+ M K + + + +ID+ +
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYA 588
Query: 464 RGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSL 523
+ G+L+ A + ++M E N + +++ AC H ++ + L + + P +
Sbjct: 589 KCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITF 647
Query: 524 LSNI 527
L I
Sbjct: 648 LEII 651
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 152/583 (26%), Positives = 253/583 (43%), Gaps = 60/583 (10%)
Query: 17 RLLEEKL-----CTLHRCSNLDLV---KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHIS 68
R LEE + L CSN +L+ KQ+HA L+ + D Y +++ +++C S
Sbjct: 28 RFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFS 87
Query: 69 SAVNVFNQVPY--PNVHLYNSLIRAHALNGS-HPSLTFSTFFHMQREGVYPDNFTYPFLL 125
+F ++ ++ +NS+I + NG + +L F +F M GV PD T+P L+
Sbjct: 88 DCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAF--YFKMLCFGVSPDVSTFPCLV 145
Query: 126 KACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERD 185
KAC + + + V G + FV +SLI +Y G ID +LF + ++D
Sbjct: 146 KACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYG--KIDVPSKLFDRVLQKD 203
Query: 186 AVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTM-LDGYAKAGEMNKAFELFDRML 244
V WN M+ G + G LD K F M D +S N + D +L ++
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVM-RMDQISPNAVTFDCVLSVCASKLLIDLGVQLH 262
Query: 245 QWNIIS--------WSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
++S ++++ YS+ G D A LF + V W +ISGY + G M+
Sbjct: 263 GLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLME 322
Query: 297 EATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFI 356
E+ + +M +G+ PD S+L + ++ L K+IH + R + +A I
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALI 382
Query: 357 DMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDK 416
D Y KC + A IFS+ D+V + +MI G+ +G +LE+F +V P++
Sbjct: 383 DAYFKCRGVSMAQNIFSQ-CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNE 441
Query: 417 YTF------IGLLCACT-----HAGLVDKG-RNYFN-------------SMEKVYGIVPQ 451
T IG+L A H ++ KG N N M Y I +
Sbjct: 442 ITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFER 501
Query: 452 -----IEHYGCMIDLLSRGGHLEEAFELLRSMPVEP---NAIVVGTLLGACRMHNDVELA 503
I + MI ++ + A ++ R M V + + + L AC
Sbjct: 502 LSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFG 561
Query: 504 RALSEHLFK-LVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMK 545
+A+ + K + SD + S L ++YA+ G+ +V MK
Sbjct: 562 KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK 604
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 186/395 (47%), Gaps = 27/395 (6%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L ++ + NL+ KQIH +++ + D+++ LI A+ CR +S A N+F+Q +V
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDV 406
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
++ ++I + NG + + F + + + P+ T +L +L L + +H
Sbjct: 407 VVFTAMISGYLHNGLYID-SLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHG 465
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
+ K GF + ++ID Y++CG + + A +F + +RD V+WNSMI + +
Sbjct: 466 FIIKKGFDNRCNIGCAVIDMYAKCGRMNL--AYEIFERLSKRDIVSWNSMITRCAQSDNP 523
Query: 203 DGAFKLFDEMPER----DMVSWNTMLDGYAK--AGEMNKAFELF--DRMLQWNIISWSTM 254
A +F +M D VS + L A + KA F L ++ S ST+
Sbjct: 524 SAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTL 583
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM-EEAGLKPD 313
+ Y++ G++ A +F EKN+V W +II+ G +K++ L+ +M E++G++PD
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 314 DGVLISILTACAESGMLGLGKKIHASV--------QRCRFRCSTKVLNAFIDMYAKCGCL 365
+ I+++C G + G + S+ Q+ + C +D++ + G L
Sbjct: 644 QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYAC-------VVDLFGRAGRL 696
Query: 366 DAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
A+ M D W +++ +H E A
Sbjct: 697 TEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELA 731
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 186/590 (31%), Positives = 299/590 (50%), Gaps = 20/590 (3%)
Query: 25 TLHRCSNLDLV---KQIHAQLLKA-HLHQDLYVAPKLIAAFSLCRH-ISSAVNVFNQVPY 79
+ CSN D V + L+K H D+ V LI F + +A VF+++
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
NV + +I + P F M G D FT + AC +L L +
Sbjct: 232 LNVVTWTLMI-TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQ 290
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVG-IDGAMRLFSAMEERDAVTWNSMIGGLVR 198
+H+ + G +D V SL+D Y++C G +D ++F ME+ ++W ++I G ++
Sbjct: 291 LHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMK 348
Query: 199 GGDL-DGAFKLFDEMPERDMVSWN--TMLDGYAKAGEMNKAF-------ELFDRMLQWNI 248
+L A LF EM + V N T + G ++ + F R L N
Sbjct: 349 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 408
Query: 249 ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEA 308
++++ + ++ M+ A+ F+ EKNLV + T + G ++A L ++ E
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 468
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAA 368
L S+L+ A G + G++IH+ V + C+ V NA I MY+KCG +D A
Sbjct: 469 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 528
Query: 369 FGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTH 428
+F+ M + +++SW SMI GF HG + LE F+ M+ EG +P++ T++ +L AC+H
Sbjct: 529 SRVFNFMENR-NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSH 587
Query: 429 AGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVG 488
GLV +G +FNSM + + I P++EHY CM+DLL R G L +AFE + +MP + + +V
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWR 647
Query: 489 TLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAG 548
T LGACR+H++ EL + + + +L P++P + LSNIYA AG W +R +MK
Sbjct: 648 TFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERN 707
Query: 549 GQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
K G S I F V D +HP + IY + RL+ ++++ GYVP
Sbjct: 708 LVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVP 757
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 213/481 (44%), Gaps = 36/481 (7%)
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP-DNFTYPFLLKACTGPSSLPLVQMI 140
+++ + LI H LN S M R+G+ P D+ T+ LLK+C L +++
Sbjct: 26 INVADRLILRH-LNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLV 84
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME---ERDAVTWNSMIGGLV 197
HA + +F D + NSLI YS+ G A +F M +RD V+W++M+
Sbjct: 85 HARLIEFDIEPDSVLYNSLISLYSKSGDSA--KAEDVFETMRRFGKRDVVSWSAMMACYG 142
Query: 198 RGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKA---------GEMNKAFELFDRMLQWNI 248
G A K+F E E +V + +A G + F + + ++
Sbjct: 143 NNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV 202
Query: 249 ISWSTMVCGYSRA-GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
+++ + + + A +FDK E N+V WT +I+ + GF +EA + M
Sbjct: 203 CVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVL 262
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKC---GC 364
+G + D L S+ +ACAE L LGK++H+ R V + +DMYAKC G
Sbjct: 263 SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGS 320
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQ-GEKALELFSSMVHEG-FEPDKYTFIGL 422
+D +F +M ++SW ++I G+ + +A+ LFS M+ +G EP+ +TF
Sbjct: 321 VDDCRKVFDRME-DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSA 379
Query: 423 LCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEP 482
AC + G+ K G+ +I + + +E+A S+ E
Sbjct: 380 FKACGNLSDPRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EK 437
Query: 483 NAIVVGTLL-GACRMHNDVELARALSEHLFKLVPSDPGNF-SLLSNIYAQAGDWMNVASV 540
N + T L G CR N + + LSE + + F SLLS + NV S+
Sbjct: 438 NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGV-------ANVGSI 490
Query: 541 R 541
R
Sbjct: 491 R 491
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/466 (22%), Positives = 209/466 (44%), Gaps = 19/466 (4%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY---PNVHL 84
R + L K +HA+L++ + D + LI+ +S + A +VF + +V
Sbjct: 74 RARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVS 133
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
+++++ + NG F G+ P+++ Y +++AC+ + + ++ +
Sbjct: 134 WSAMMACYGNNGRELD-AIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192
Query: 145 EKFGFYE-DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
K G +E D+ V SLID + + G + A ++F M E + VTW MI ++ G
Sbjct: 193 MKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 204 GAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNII-----SWSTM 254
A + F +M E D + +++ A+ ++ +L ++ ++ S M
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDM 311
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEK-GFMKEATVLYDKMEEAG-LKP 312
S G +D R +FD+ + +++ WT +I+GY + EA L+ +M G ++P
Sbjct: 312 YAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEP 371
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
+ S AC +GK++ + ++ V N+ I M+ K ++ A F
Sbjct: 372 NHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
++ +K+LVS+N+ + G + E+A +L S + +TF LL + G +
Sbjct: 432 ESLS-EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 433 DKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
KG + + K+ G+ +I + S+ G ++ A + M
Sbjct: 491 RKGEQIHSQVVKL-GLSCNQPVCNALISMYSKCGSIDTASRVFNFM 535
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 199/584 (34%), Positives = 303/584 (51%), Gaps = 19/584 (3%)
Query: 30 SNLDLVKQIHAQLLKA-HLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSL 88
S++ L + +HA+++K ++A LI +S H SA V P NV + SL
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSL 79
Query: 89 IRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV-QMIHAHVEKF 147
I A NG H S FF M+REGV P++FT+P KA LP+ + IHA K
Sbjct: 80 ISGLAQNG-HFSTALVEFFEMRREGVVPNDFTFPCAFKA-VASLRLPVTGKQIHALAVKC 137
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
G D+FV S D Y C D A +LF + ER+ TWN+ I V G A +
Sbjct: 138 GRILDVFVGCSAFDMY--CKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 208 LFDEMPERD----MVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG----YS 259
F E D +++ L+ + +N +L +L+ + ++ G Y
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
+ + + ++F + KN V W ++++ Y + ++A+VLY + + ++ D ++ S
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 315
Query: 320 ILTACAESGMLGLGKKIHA-SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
+L+ACA L LG+ IHA +V+ C R + V +A +DMY KCGC++ + F +M +
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVER-TIFVGSALVDMYGKCGCIEDSEQAFDEMP-E 373
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGF--EPDKYTFIGLLCACTHAGLVDKGR 436
K+LV+ NS+I G+ GQ + AL LF M G P+ TF+ LL AC+ AG V+ G
Sbjct: 374 KNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGM 433
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRM 496
F+SM YGI P EHY C++D+L R G +E A+E ++ MP++P V G L ACRM
Sbjct: 434 KIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRM 493
Query: 497 HNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
H +L +E+LFKL P D GN LLSN +A AG W +VR ++K G +K +G S
Sbjct: 494 HGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYS 553
Query: 557 SIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGI 600
I F D SH + +I + +L +++ GY P +
Sbjct: 554 WITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDL 597
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 197/663 (29%), Positives = 318/663 (47%), Gaps = 84/663 (12%)
Query: 13 FSPRRLLEEKLCTLH-RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAV 71
F PR + +L ++ + S L+ +Q+ ++ + D +++ + I+ A
Sbjct: 45 FQPRAHILNRLIDVYCKSSELNYARQLFDEISEP----DKIARTTMVSGYCASGDITLAR 100
Query: 72 NVFNQVPY--PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLK--A 127
VF + P + +YN++I + N S + F M+ EG PDNFT+ +L A
Sbjct: 101 GVFEKAPVCMRDTVMYNAMITGFSHNNDGYS-AINLFCKMKHEGFKPDNFTFASVLAGLA 159
Query: 128 CTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVG--IDGAMRLFSAMEERD 185
VQ HA K G V N+L+ YS+C + A ++F + E+D
Sbjct: 160 LVADDEKQCVQ-FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKD 218
Query: 186 AVTW--------------------------------NSMIGGLVRGGDLDGAFKLFDEMP 213
+W N+MI G V G A ++ M
Sbjct: 219 ERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMV 278
Query: 214 ----ERDMVSW----------------------------------NTMLDGYAKAGEMNK 235
E D ++ N+++ Y K G+ ++
Sbjct: 279 SSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDE 338
Query: 236 AFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFM 295
A +F++M +++SW+ ++ GY +G + A+++F + EKN++ W +ISG AE GF
Sbjct: 339 ARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFG 398
Query: 296 KEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
+E L+ M+ G +P D + +CA G G++ HA + + F S NA
Sbjct: 399 EEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNAL 458
Query: 356 IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
I MYAKCG ++ A +F M D VSWN++I G HG G +A++++ M+ +G PD
Sbjct: 459 ITMYAKCGVVEEARQVFRTMPCL-DSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPD 517
Query: 416 KYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
+ T + +L AC+HAGLVD+GR YF+SME VY I P +HY +IDLL R G +A ++
Sbjct: 518 RITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVI 577
Query: 476 RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWM 535
S+P +P A + LL CR+H ++EL ++ LF L+P G + LLSN++A G W
Sbjct: 578 ESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWE 637
Query: 536 NVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVG 595
VA VR M++ G +K S I F V D SHP+++ +Y + L ++R++G
Sbjct: 638 EVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLG 697
Query: 596 YVP 598
YVP
Sbjct: 698 YVP 700
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 137/554 (24%), Positives = 226/554 (40%), Gaps = 150/554 (27%)
Query: 132 SSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNS 191
+SL L + +H ++ FGF + N LID Y C ++ A +LF + E D + +
Sbjct: 28 TSLQLARAVHGNIITFGFQPRAHILNRLIDVY--CKSSELNYARQLFDEISEPDKIARTT 85
Query: 192 MIGGLVRGGDLDGAFKLFDEMP--ERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQ 245
M+ G GD+ A +F++ P RD V +N M+ G++ + A LF +M +
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 246 WNIISWSTMVCGYSRAGD----------------------------------------MD 265
+ ++++++ G + D +
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLH 205
Query: 266 MARMLFDKCPEKNLVLWTT--------------------------------IISGYAEKG 293
AR +FD+ EK+ WTT +ISGY +G
Sbjct: 206 SARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRG 265
Query: 294 FMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLN 353
F +EA + +M +G++ D+ S++ ACA +G+L LGK++HA V R R S N
Sbjct: 266 FYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR-REDFSFHFDN 324
Query: 354 AFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS--------------------------- 386
+ + +Y KCG D A IF KM KDLVSWN+
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPA-KDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 387 ----MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSM 442
MI G +G GE+ L+LFS M EGFEP Y F G + +C G G+ Y +
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443
Query: 443 EKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP----------------------- 479
K+ G + +I + ++ G +EEA ++ R+MP
Sbjct: 444 LKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 480 -----------VEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPG--NFSLLSN 526
+ P+ I + T+L AC V+ R + + + PG +++ L +
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 527 IYAQAGDWMNVASV 540
+ ++G + + SV
Sbjct: 563 LLCRSGKFSDAESV 576
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/455 (36%), Positives = 252/455 (55%), Gaps = 44/455 (9%)
Query: 186 AVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDG--------------- 226
V+W S I L R G L A K F +M E + +++ +L G
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 227 -----------------------YAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGD 263
Y+K G KA +FD M N ++W+TM+ GY R+G
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+D A +FDK PE++L+ WT +I+G+ +KG+ +EA + + +M+ +G+KPD +I+ L A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
C G L G +H V F+ + +V N+ ID+Y +CGC++ A +F M K+ +VS
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME-KRTVVS 274
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
WNS+I GF +G ++L F M +GF+PD TF G L AC+H GLV++G YF M+
Sbjct: 275 WNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMH-NDVEL 502
Y I P+IEHYGC++DL SR G LE+A +L++SMP++PN +V+G+LL AC H N++ L
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIVL 394
Query: 503 ARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXX 562
A L +HL L N+ +LSN+YA G W + +R +MK G +K G SSI
Sbjct: 395 AERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDD 454
Query: 563 XXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYV 597
F D++H ++ I +++ + DLR G V
Sbjct: 455 CMHVFMAGDNAHVETTYIREVLELISSDLRLQGCV 489
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 167/375 (44%), Gaps = 48/375 (12%)
Query: 66 HISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLL 125
H + + NQ + S I NG F M GV P++ T+ LL
Sbjct: 20 HANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAA-KEFSDMTLAGVEPNHITFIALL 78
Query: 126 KACTG--PSSLPLVQMIHAHVEKFGFYED-IFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
C S L ++H + K G + + V ++I YS+ G A +F ME
Sbjct: 79 SGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGR--FKKARLVFDYME 136
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDR 242
++++VTWN+MI G +R G +D A K+FD+MPERD++SW M++G+ K G +A F
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 243 M---------------------------------------LQWNIISWSTMVCGYSRAGD 263
M + N+ ++++ Y R G
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
++ AR +F ++ +V W ++I G+A G E+ V + KM+E G KPD LTA
Sbjct: 257 VEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTA 316
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKKDL 381
C+ G++ G + + + +C +R S ++ +D+Y++ G L+ A + M K +
Sbjct: 317 CSHVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNE 375
Query: 382 VSWNSMIHGFGVHGQ 396
V S++ HG
Sbjct: 376 VVIGSLLAACSNHGN 390
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 13/247 (5%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
+I + + +A +F+++P ++ + ++I G + F MQ GV P
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKG-YQEEALLWFREMQISGVKP 204
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
D L ACT +L +H +V F ++ V NSLID Y RCG V + A +
Sbjct: 205 DYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCV--EFARQ 262
Query: 177 LFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGE 232
+F ME+R V+WNS+I G G+ + F +M E+ D V++ L + G
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
Query: 233 MNKAFELF-----DRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK-NLVLWTTII 286
+ + F D + I + +V YSRAG ++ A L P K N V+ +++
Sbjct: 323 VEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLL 382
Query: 287 SGYAEKG 293
+ + G
Sbjct: 383 AACSNHG 389
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 184/628 (29%), Positives = 321/628 (51%), Gaps = 49/628 (7%)
Query: 14 SPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDL--YVAPKLIAAFSLCRHISSAV 71
S + L++ + R + KQ+HAQ ++ Q L A +I+ ++ + + A+
Sbjct: 3 SSKALIKTLIKNPTRIKSKSQAKQLHAQFIRT---QSLSHTSASIVISIYTNLKLLHEAL 59
Query: 72 NVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGP 131
+F + P V + S+IR + S S ++F M+ G PD+ +P +LK+CT
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFT-DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMM 118
Query: 132 SSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVG--------------------- 170
L + +H + + G D++ N+L++ Y++ G+G
Sbjct: 119 MDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGD 178
Query: 171 -------------IDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDM 217
ID R+F M +D V++N++I G + G + A ++ EM D+
Sbjct: 179 EDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238
Query: 218 ----VSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS----WSTMVCGYSRAGDMDMARM 269
+ +++L +++ ++ K E+ +++ I S S++V Y+++ ++ +
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 270 LFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGM 329
+F + ++ + W ++++GY + G EA L+ +M A +KP S++ ACA
Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 330 LGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIH 389
L LGK++H V R F + + +A +DMY+KCG + AA IF +M D VSW ++I
Sbjct: 359 LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN-VLDEVSWTAIIM 417
Query: 390 GFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIV 449
G +HG G +A+ LF M +G +P++ F+ +L AC+H GLVD+ YFNSM KVYG+
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477
Query: 450 PQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEH 509
++EHY + DLL R G LEEA+ + M VEP V TLL +C +H ++ELA ++E
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537
Query: 510 LFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTV 569
+F + + G + L+ N+YA G W +A +RL+M+ G +K S I F
Sbjct: 538 IFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVS 597
Query: 570 FDHSHPKSDDIYQMIGRLVHDLRQVGYV 597
D SHP D I + + ++ + + GYV
Sbjct: 598 GDRSHPSMDKINEFLKAVMEQMEKEGYV 625
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 304 bits (778), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/588 (32%), Positives = 299/588 (50%), Gaps = 20/588 (3%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L T + +L L +Q+H LK L L V+ LI + R A VF+ + ++
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDL 381
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTG-PSSLPLVQMIH 141
+NS+I A NG F + R G+ PD +T +LKA + P L L + +H
Sbjct: 382 ISWNSVIAGIAQNGLEVE-AVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH 440
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER---DAVTWNSMIGGLVR 198
H K D FV +LID+YSR + M+ + ER D V WN+M+ G +
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSR------NRCMKEAEILFERHNFDLVAWNAMMAGYTQ 494
Query: 199 GGDLDGAFKLFDEMPER----DMVSWNTMLD--GYAKAGEMNKAFELFDRMLQWNIISW- 251
D KLF M ++ D + T+ G+ A K + +++ W
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 252 -STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
S ++ Y + GDM A+ FD P + V WTT+ISG E G + A ++ +M G+
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV 614
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
PD+ + ++ A + L G++IHA+ + V + +DMYAKCG +D A+
Sbjct: 615 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 371 IFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG 430
+F ++ ++ +WN+M+ G HG+G++ L+LF M G +PDK TFIG+L AC+H+G
Sbjct: 675 LFKRIE-MMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTL 490
LV + + SM YGI P+IEHY C+ D L R G +++A L+ SM +E +A + TL
Sbjct: 734 LVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTL 793
Query: 491 LGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQ 550
L ACR+ D E + ++ L +L P D + LLSN+YA A W + R MK +
Sbjct: 794 LAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVK 853
Query: 551 KPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
K G S I F V D S+ +++ IY+ + ++ D++Q GYVP
Sbjct: 854 KDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVP 901
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 177/409 (43%), Gaps = 45/409 (11%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
S+L L K HA++L + + ++ LI+ +S C ++ A VF+++P ++ +NS++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 90 RAHALNGS----HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
A+A + + F F ++++ VY T +LK C + + H +
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
K G D FV +L++ Y + G V + G +
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKV----------------------------KEGKV--- 201
Query: 206 FKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTM--VCGY- 258
LF+EMP RD+V WN ML Y + G +A +L L N I+ + + G
Sbjct: 202 --LFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDD 259
Query: 259 SRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLI 318
S AG + D ++ +S Y G + M E+ ++ D I
Sbjct: 260 SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFI 319
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
+L + L LG+++H + V N+ I+MY K A +F M+ +
Sbjct: 320 LMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS-E 378
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
+DL+SWNS+I G +G +A+ LF ++ G +PD+YT +L A +
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 80/242 (33%)
Query: 121 YPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSA 180
+ FL A T S L L + HA + F + F+ N+LI YS+CG
Sbjct: 43 FGFLRNAITS-SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGS------------ 89
Query: 181 MEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGE-----MNK 235
L A ++FD+MP+RD+VSWN++L YA++ E + +
Sbjct: 90 ---------------------LTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQ 128
Query: 236 AFELFDRMLQWNIISWSTMVCG-------------------------------------- 257
AF LF R+L+ +++ S M
Sbjct: 129 AFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALV 187
Query: 258 --YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDG 315
Y + G + ++LF++ P +++VLW ++ Y E GF +EA L +GL P++
Sbjct: 188 NIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEI 247
Query: 316 VL 317
L
Sbjct: 248 TL 249
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 190/599 (31%), Positives = 306/599 (51%), Gaps = 56/599 (9%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLI---AAFSLCRHISSAVNVFNQV-PYPNVHLYNSLIRAH 92
Q+HA + + + + PKL+ +AF+L S + + + P P +N LI ++
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLP----WNVLIASY 119
Query: 93 ALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYED 152
A N + + + M +G+ PD FTYP +LKAC + +++H +E +
Sbjct: 120 AKNELFEEV-IAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSS 178
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
++V N+LI Y R +GI A RLF M ERDAV+WN++I G AF+LFD+M
Sbjct: 179 LYVCNALISMYKRFRNMGI--ARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
Query: 213 ----PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWN--------IISW--------- 251
E +++WN + G + G A L RM + II
Sbjct: 237 WFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAI 296
Query: 252 ----------------------STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGY 289
+T++ YS+ D+ A ++F + E +L W +IISGY
Sbjct: 297 RLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGY 356
Query: 290 AEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCR-FRCS 348
A+ +EA+ L +M AG +P+ L SIL CA L GK+ H + R + F+
Sbjct: 357 AQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDY 416
Query: 349 TKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMV 408
T + N+ +D+YAK G + AA + S + K+D V++ S+I G+G G+G AL LF M
Sbjct: 417 TMLWNSLVDVYAKSGKIVAAKQV-SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMT 475
Query: 409 HEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHL 468
G +PD T + +L AC+H+ LV +G F M+ YGI P ++H+ CM+DL R G L
Sbjct: 476 RSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFL 535
Query: 469 EEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIY 528
+A +++ +MP +P+ TLL AC +H + ++ + +E L ++ P +PG + L++N+Y
Sbjct: 536 AKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMY 595
Query: 529 AQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRL 587
A AG W +A VR M++ G +K G + I F+V D S P++ + Y ++ L
Sbjct: 596 AAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGL 654
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 137/572 (23%), Positives = 215/572 (37%), Gaps = 123/572 (21%)
Query: 84 LYNSLIRAHALNGSHPSLTFSTF--FHMQREGVYPDNF---TYPFLLKACTGPSSLPLVQ 138
L+ SL H + H F TF +Q D+ + LL AC +
Sbjct: 6 LFKSL--GHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGV 63
Query: 139 MIHAHVEKFGF-YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERD---AVTWNSMIG 194
+HAH G Y + VP L+ YS + S +E D + WN +I
Sbjct: 64 QVHAHCISSGVEYHSVLVPK-LVTFYS-----AFNLHNEAQSIIENSDILHPLPWNVLIA 117
Query: 195 GLVRGGDLDGAFKLFDEM--PERDMVSWNTMLDGYAKAGEMNKAFELFD----RMLQWNI 248
+ +LF+E+ + MVS D + + E D R++ +I
Sbjct: 118 SYAKN-------ELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSI 170
Query: 249 ----ISWSTMVCG-----YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEAT 299
S VC Y R +M +AR LFD+ E++ V W +I+ YA +G EA
Sbjct: 171 EVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAF 230
Query: 300 VLYDKMEEAGLKP-----------------------------------DDGVLISILTAC 324
L+DKM +G++ D +I L AC
Sbjct: 231 ELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKAC 290
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
+ G + LGK+IH + V N I MY+KC L A +F + T + L +W
Sbjct: 291 SLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVF-RQTEENSLCTW 349
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY------ 438
NS+I G+ + E+A L M+ GF+P+ T +L C + G+ +
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 439 ----------FNSMEKVYGIVPQIEHYGCMIDLLSR------------------GGHLEE 470
+NS+ VY +I + DL+S+ GG
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALA 469
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPG------NFSLL 524
F+ + ++P+ + V +L AC V E LF + + G +FS +
Sbjct: 470 LFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEG----ERLFMKMQCEYGIRPCLQHFSCM 525
Query: 525 SNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
++Y +AG + M KPSGA+
Sbjct: 526 VDLYGRAGFLAKAKDIIHNMP----YKPSGAT 553
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 154/338 (45%), Gaps = 32/338 (9%)
Query: 10 PTWFSP-RRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHIS 68
PT P ++ K C+L + L K+IH + + V LI +S C+ +
Sbjct: 275 PTSLDPVAMIIGLKACSL--IGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLR 332
Query: 69 SAVNVFNQVPYPNVHLYNSLIRAHA-LNGSHPSLTFSTFFHMQRE----GVYPDNFTYPF 123
A+ VF Q ++ +NS+I +A LN S + H+ RE G P++ T
Sbjct: 333 HALIVFRQTEENSLCTWNSIISGYAQLNKSEEA------SHLLREMLVAGFQPNSITLAS 386
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGFYED-IFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
+L C ++L + H ++ + ++D + NSL+D Y++ G I A ++ M
Sbjct: 387 ILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSG--KIVAAKQVSDLMS 444
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFE 238
+RD VT+ S+I G G+ A LF EM D V+ +L + + +++
Sbjct: 445 KRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGER 504
Query: 239 LFDRM-----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK-NLVLWTTIISGYAEK 292
LF +M ++ + +S MV Y RAG + A+ + P K + W T+++
Sbjct: 505 LFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIH 564
Query: 293 GFMKEATVLYDKMEEAGLKPDDG---VLISILTACAES 327
G + +K+ E +KP++ VLI+ + A A S
Sbjct: 565 GNTQIGKWAAEKLLE--MKPENPGYYVLIANMYAAAGS 600
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 186/552 (33%), Positives = 298/552 (53%), Gaps = 32/552 (5%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLI---------AAFS--LCRHISSAVNVF 74
+ RCS+L + KQI QL+ L +D + K++ A++S + I S ++ F
Sbjct: 13 ISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSVLSSF 72
Query: 75 NQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSL 134
+ YN+L+ ++A+ P +T + G PD FT+P + KAC S +
Sbjct: 73 S---------YNTLLSSYAVC-DKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGI 122
Query: 135 PLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIG 194
+ IH V K GFY+DI+V NSL+ Y CG A ++F M RD V+W +I
Sbjct: 123 REGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGES--RNACKVFGEMPVRDVVSWTGIIT 180
Query: 195 GLVRGGDLDGAFKLFDEMP-ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW-NIISWS 252
G R G A F +M E ++ ++ +L + G ++ + +L+ ++IS
Sbjct: 181 GFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLE 240
Query: 253 T---MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME-EA 308
T ++ Y + + A +F + +K+ V W ++ISG KEA L+ M+ +
Sbjct: 241 TGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSS 300
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAA 368
G+KPD +L S+L+ACA G + G+ +H + + T + A +DMYAKCG ++ A
Sbjct: 301 GIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETA 360
Query: 369 FGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTH 428
IF+ + K ++ +WN+++ G +HG G ++L F MV GF+P+ TF+ L AC H
Sbjct: 361 LEIFNGIRSK-NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCH 419
Query: 429 AGLVDKGRNYFNSME-KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVV 487
GLVD+GR YF+ M+ + Y + P++EHYGCMIDLL R G L+EA EL+++MPV+P+ +
Sbjct: 420 TGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRIC 479
Query: 488 GTLLGACRMHNDV-ELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKN 546
G +L AC+ + EL + + + + D G + LLSNI+A W +VA +R MK
Sbjct: 480 GAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKV 539
Query: 547 AGGQKPSGASSI 558
G K G+S I
Sbjct: 540 KGISKVPGSSYI 551
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 187/577 (32%), Positives = 294/577 (50%), Gaps = 84/577 (14%)
Query: 71 VNVFNQ-VPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACT 129
+FN+ V +V +NS+I A +G + F M++ +YP ++P +KAC+
Sbjct: 29 TTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLA-FSSMRKLSLYPTRSSFPCAIKACS 87
Query: 130 GPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTW 189
+ + H FG+ DIFV ++LI YS CG
Sbjct: 88 SLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCG---------------------- 125
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELF--------- 240
L+ A K+FDE+P+R++VSW +M+ GY G A LF
Sbjct: 126 -----------KLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEND 174
Query: 241 -------DRMLQWNIISW-----------------------------STMVCGYSRAGD- 263
D M ++IS +T++ Y++ G+
Sbjct: 175 DDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEG 234
Query: 264 -MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS-IL 321
+ +AR +FD+ +K+ V + +I+S YA+ G EA ++ ++ + + + + +S +L
Sbjct: 235 GVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVL 294
Query: 322 TACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDL 381
A + SG L +GK IH V R V + IDMY KCG ++ A F +M K ++
Sbjct: 295 LAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK-NV 353
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNS 441
SW +MI G+G+HG KALELF +M+ G P+ TF+ +L AC+HAGL +G +FN+
Sbjct: 354 RSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNA 413
Query: 442 MEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVE 501
M+ +G+ P +EHYGCM+DLL R G L++A++L++ M ++P++I+ +LL ACR+H +VE
Sbjct: 414 MKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVE 473
Query: 502 LARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXX 561
LA LF+L S+ G + LLS+IYA AG W +V VR+ MKN G KP G S +
Sbjct: 474 LAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELN 533
Query: 562 XXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F + D HP+ + IY+ + L L + GYV
Sbjct: 534 GEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVS 570
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 209/412 (50%), Gaps = 26/412 (6%)
Query: 24 CTLHRCSNL-DLV--KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYP 80
C + CS+L D+ KQ H Q D++V+ LI +S C + A VF+++P
Sbjct: 81 CAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR 140
Query: 81 NVHLYNSLIRAHALNGSHPSLTFSTFF-------HMQREGVYPDNFTYPFLLKACTGPSS 133
N+ + S+IR + LNG+ +L + F + + ++ D+ ++ AC+ +
Sbjct: 141 NIVSWTSMIRGYDLNGN--ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPA 198
Query: 134 LPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMI 193
L + IH+ V K GF + V N+L+D+Y++ G G+ A ++F + ++D V++NS++
Sbjct: 199 KGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIM 258
Query: 194 GGLVRGGDLDGAFKLFDEMPERDMVSWN-----TMLDGYAKAGEMNKAFELFDRM----L 244
+ G + AF++F + + +V++N T+L + +G + + D++ L
Sbjct: 259 SVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL 318
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
+ ++I ++++ Y + G ++ AR FD+ KN+ WT +I+GY G +A L+
Sbjct: 319 EDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPA 378
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLG-KKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
M ++G++P+ +S+L AC+ +G+ G + +A R + +D+ + G
Sbjct: 379 MIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAG 438
Query: 364 CLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
L A+ + +M K D + W+S++ +H K +EL V FE D
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAACRIH----KNVELAEISVARLFELD 486
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 292/580 (50%), Gaps = 25/580 (4%)
Query: 35 VKQIHAQLLKAHLHQD--LYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAH 92
V Q+HA +K + L V+ L+ ++ R + A +F ++P + +N+LI +
Sbjct: 166 VGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGY 225
Query: 93 ALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYED 152
+G + + F M++ G P +FT+ +LKA G L Q +HA GF D
Sbjct: 226 EKDGLYTE-SIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRD 284
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
V N ++D YS+ V ++ M LF M E D V++N +I + + + F EM
Sbjct: 285 ASVGNQILDFYSKHDRV-LETRM-LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREM 342
Query: 213 P----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISW----STMVCGYSRAGDM 264
+R + TML A + +L + L S +++V Y++
Sbjct: 343 QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMF 402
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
+ A ++F P++ V WT +ISGY +KG L+ KM + L+ D ++L A
Sbjct: 403 EEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKAS 462
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAF-----IDMYAKCGCLDAAFGIFSKMTGKK 379
A L LGK++HA + R S + N F +DMYAKCG + A +F +M +
Sbjct: 463 ASFASLLLGKQLHAFIIR-----SGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DR 516
Query: 380 DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYF 439
+ VSWN++I +G GE A+ F+ M+ G +PD + +G+L AC+H G V++G YF
Sbjct: 517 NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYF 576
Query: 440 NSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHND 499
+M +YGI P+ +HY CM+DLL R G EA +L+ MP EP+ I+ ++L ACR+H +
Sbjct: 577 QAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKN 636
Query: 500 VELARALSEHLFKLVP-SDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
LA +E LF + D + +SNIYA AG+W V V+ M+ G +K S +
Sbjct: 637 QSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWV 696
Query: 559 XXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F+ D +HP D+I + I L ++ + GY P
Sbjct: 697 EVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKP 736
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 177/394 (44%), Gaps = 49/394 (12%)
Query: 130 GPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTW 189
P++ + + A + K GF D N +++ R G V A +++ M ++ V+
Sbjct: 25 SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVS--AARKVYDEMPHKNTVST 82
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI- 248
N+MI G V+ GD+ A LFD MP+R +V+W ++ YA+ ++AF+LF +M + +
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 249 -----ISWSTMVCG-------------------------------------YSRAGDMDM 266
++++T++ G Y +D+
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
A +LF++ PEK+ V + T+I+GY + G E+ L+ KM ++G +P D +L A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS 386
LG+++HA F V N +D Y+K + +F +M + D VS+N
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNV 321
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
+I + Q E +L F M GF+ + F +L + + GR + +
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLH--CQALL 379
Query: 447 GIVPQIEHYG-CMIDLLSRGGHLEEAFELLRSMP 479
I H G ++D+ ++ EEA + +S+P
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP 413
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 211/471 (44%), Gaps = 24/471 (5%)
Query: 48 HQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFF 107
H++ +I+ +SSA ++F+ +P V + L+ +A N SH F F
Sbjct: 76 HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARN-SHFDEAFKLFR 134
Query: 108 HMQREG--VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF--VPNSLIDSY 163
M R PD+ T+ LL C V +HA K GF + F V N L+ SY
Sbjct: 135 QMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 164 SRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTM 223
C +D A LF + E+D+VT+N++I G + G + LF +M + +
Sbjct: 195 --CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFT 252
Query: 224 LDGYAKAGEMNKAFELFDRMLQWNIIS--------WSTMVCGYSRAGDMDMARMLFDKCP 275
G KA F L ++ ++ + + ++ YS+ + RMLFD+ P
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Query: 276 EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKK 335
E + V + +IS Y++ + + + +M+ G + ++L+ A L +G++
Sbjct: 313 ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQ 372
Query: 336 IHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGF---G 392
+H V N+ +DMYAKC + A IF + ++ VSW ++I G+ G
Sbjct: 373 LHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALISGYVQKG 431
Query: 393 VHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQI 452
+HG G L+LF+ M D+ TF +L A + G+ + + G + +
Sbjct: 432 LHGAG---LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIR-SGNLENV 487
Query: 453 EHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
++D+ ++ G +++A ++ MP + NA+ L+ A + D E A
Sbjct: 488 FSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAA 537
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 21/231 (9%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
++L L KQ+HA ++++ ++++ L+ ++ C I AV VF ++P N +N+LI
Sbjct: 466 ASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALI 525
Query: 90 RAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACT-------GPSSLPLVQMIHA 142
AHA NG + F M G+ PD+ + +L AC+ G + I+
Sbjct: 526 SAHADNGDGEA-AIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYG 584
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME-ERDAVTWNSMIGG--LVRG 199
K Y ++D R G A +L M E D + W+S++ + +
Sbjct: 585 ITPKKKHYA------CMLDLLGRNGRFA--EAEKLMDEMPFEPDEIMWSSVLNACRIHKN 636
Query: 200 GDL--DGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI 248
L A KLF RD ++ +M + YA AGE K ++ M + I
Sbjct: 637 QSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 180/608 (29%), Positives = 292/608 (48%), Gaps = 74/608 (12%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
+ L + K+IH L+K+ DL+ L ++ CR ++ A VF+++P ++ +N+++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 90 RAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF 149
++ NG + M E + P T +L A + + + + IH + + GF
Sbjct: 209 AGYSQNGM-ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGF 267
Query: 150 YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
+ + +L+D Y++CG L+ A +LF
Sbjct: 268 DSLVNISTALVDMYAKCGS---------------------------------LETARQLF 294
Query: 210 DEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ------------------------ 245
D M ER++VSWN+M+D Y + +A +F +ML
Sbjct: 295 DGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLE 354
Query: 246 ---------------WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
N+ ++++ Y + ++D A +F K + LV W +I G+A
Sbjct: 355 RGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFA 414
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
+ G +A + +M +KPD +S++TA AE + K IH V R +
Sbjct: 415 QNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
V A +DMYAKCG + A IF M+ ++ + +WN+MI G+G HG G+ ALELF M
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG 533
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
+P+ TF+ ++ AC+H+GLV+ G F M++ Y I ++HYG M+DLL R G L E
Sbjct: 534 TIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNE 593
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQ 530
A++ + MPV+P V G +LGAC++H +V A +E LF+L P D G LL+NIY
Sbjct: 594 AWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRA 653
Query: 531 AGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHD 590
A W V VR+ M G +K G S + F +HP S IY + +L+
Sbjct: 654 ASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICH 713
Query: 591 LRQVGYVP 598
+++ GYVP
Sbjct: 714 IKEAGYVP 721
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 301 bits (771), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 190/620 (30%), Positives = 308/620 (49%), Gaps = 41/620 (6%)
Query: 2 QVSAGVRIPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAF 61
+V+AGV + S R + S L L Q+HA LK+ D V + +
Sbjct: 274 KVNAGVSQSIYASVLR-------SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 62 SLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTY 121
+ C ++ A +F+ N YN++I ++ H F + G+ D +
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYS-QEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 122 PFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAM 181
+ +AC L I+ K D+ V N+ ID Y +C + A R+F M
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA--EAFRVFDEM 443
Query: 182 EERDAVTWNSMIGGLVRGGDLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAF 237
RDAV+WN++I + G LF M E D ++ ++L G +
Sbjct: 444 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGM 502
Query: 238 ELFDRMLQWNIISWSTMVCG----YSRAGDMDMARML----------------FDKCPEK 277
E+ +++ + S S++ C YS+ G ++ A + +K K
Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 562
Query: 278 NL----VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
L V W +IISGY K ++A +L+ +M E G+ PD ++L CA GLG
Sbjct: 563 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLG 622
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGV 393
K+IHA V + + + + +DMY+KCG L + +F K + ++D V+WN+MI G+
Sbjct: 623 KQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLRRDFVTWNAMICGYAH 681
Query: 394 HGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIE 453
HG+GE+A++LF M+ E +P+ TFI +L AC H GL+DKG YF M++ YG+ PQ+
Sbjct: 682 HGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLP 741
Query: 454 HYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMH-NDVELARALSEHLFK 512
HY M+D+L + G ++ A EL+R MP E + ++ TLLG C +H N+VE+A + L +
Sbjct: 742 HYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLR 801
Query: 513 LVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDH 572
L P D ++LLSN+YA AG W V+ +R M+ +K G S + F V D
Sbjct: 802 LDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDK 861
Query: 573 SHPKSDDIYQMIGRLVHDLR 592
+HP+ ++IY+ +G + +++
Sbjct: 862 AHPRWEEIYEELGLIYSEMK 881
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 228/459 (49%), Gaps = 18/459 (3%)
Query: 49 QDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFH 108
+D+ K+I +S + A + FN +P +V +NS++ + NG + F
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLK-SIEVFVD 170
Query: 109 MQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGG 168
M REG+ D T+ +LK C+ L IH V + G D+ ++L+D Y++ G
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK--G 228
Query: 169 VGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDM-VS---WNTML 224
++R+F + E+++V+W+++I G V+ L A K F EM + + VS + ++L
Sbjct: 229 KRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVL 288
Query: 225 DGYAKAGEMNKAFELFDRMLQWNI----ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
A E+ +L L+ + I + + Y++ +M A++LFD N
Sbjct: 289 RSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ 348
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
+ +I+GY+++ +A +L+ ++ +GL D+ L + ACA L G +I+
Sbjct: 349 SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLA 408
Query: 341 QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
+ V NA IDMY KC L AF +F +M ++D VSWN++I +G+G +
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYET 467
Query: 401 LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC-MI 459
L LF SM+ EPD++TF +L ACT G + G +S+ K G+ GC +I
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKS-GMASN-SSVGCSLI 524
Query: 460 DLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
D+ S+ G +EEA ++ N V GT+ +MHN
Sbjct: 525 DMYSKCGMIEEAEKIHSRFFQRAN--VSGTMEELEKMHN 561
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 187/439 (42%), Gaps = 61/439 (13%)
Query: 99 PSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNS 158
PS ++ T F Q V NF++ F K C +L L + HAH+ GF FV N
Sbjct: 31 PSFSYFTDFLNQVNSVSTTNFSFVF--KECAKQGALELGKQAHAHMIISGFRPTTFVLNC 88
Query: 159 LIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMV 218
L+ Y+ A +F M RD V+WN MI G + D+ A F+ MP RD+V
Sbjct: 89 LLQVYT--NSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 219 SWNTMLDGYAKAGEMNKAFELFDRM----------------------------------- 243
SWN+ML GY + GE K+ E+F M
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 244 ----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEAT 299
++++ S ++ Y++ + +F PEKN V W+ II+G + + A
Sbjct: 207 VRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLAL 266
Query: 300 VLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMY 359
+ +M++ + S+L +CA L LG ++HA + F V A +DMY
Sbjct: 267 KFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMY 326
Query: 360 AKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTF 419
AKC + A +F + + S+N+MI G+ G KAL LF ++ G D+ +
Sbjct: 327 AKCDNMQDAQILFDN-SENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 420 IGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQ------IEHYGCMIDLLSRGGHLEEAF- 472
G+ AC + +G ++YG+ + + ID+ + L EAF
Sbjct: 386 SGVFRACALVKGLSEGL-------QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFR 438
Query: 473 ---ELLRSMPVEPNAIVVG 488
E+ R V NAI+
Sbjct: 439 VFDEMRRRDAVSWNAIIAA 457
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 224/500 (44%), Gaps = 42/500 (8%)
Query: 22 KLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
K+C+ ++L + QIH +++ D+ A L+ ++ + ++ VF +P N
Sbjct: 188 KVCSFLEDTSLGM--QIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 245
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
++++I A + + SL F MQ+ Y +L++C S L L +H
Sbjct: 246 SVSWSAII-AGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
AH K F D V + +D Y++C + A LF E + ++N+MI G +
Sbjct: 305 AHALKSDFAADGIVRTATLDMYAKCD--NMQDAQILFDNSENLNRQSYNAMITGYSQEEH 362
Query: 202 LDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELF----DRMLQWNIISWST 253
A LF + D +S + + A +++ +++ L ++ +
Sbjct: 363 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
+ Y + + A +FD+ ++ V W II+ + + G E L+ M + ++PD
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482
Query: 314 DGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFS 373
+ SIL AC G LG G +IH+S+ + ++ V + IDMY+KCG ++ A I S
Sbjct: 483 EFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 374 KMTGKKDL-------------------VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEP 414
+ + ++ VSWNS+I G+ + Q E A LF+ M+ G P
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITP 601
Query: 415 DKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC--MIDLLSRGGHLEEA- 471
DK+T+ +L C + G+ +V Q + Y C ++D+ S+ G L ++
Sbjct: 602 DKFTYATVLDTCANLASAGLGKQIH---AQVIKKELQSDVYICSTLVDMYSKCGDLHDSR 658
Query: 472 --FEL-LRSMPVEPNAIVVG 488
FE LR V NA++ G
Sbjct: 659 LMFEKSLRRDFVTWNAMICG 678
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 108/249 (43%), Gaps = 56/249 (22%)
Query: 320 ILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK- 378
+ CA+ G L LGK+ HA + FR +T VLN + +Y +A +F KM +
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 379 -----------------------------KDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
+D+VSWNSM+ G+ +G+ K++E+F M
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC---------MID 460
EG E D TF +L C+ G +++GIV ++ GC ++D
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGM-------QIHGIVVRV---GCDTDVVAASALLD 223
Query: 461 LLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGN 520
+ ++G E+ + + +P E N++ ++ C +N + LA + + K+ N
Sbjct: 224 MYAKGKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV------N 276
Query: 521 FSLLSNIYA 529
+ +IYA
Sbjct: 277 AGVSQSIYA 285
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 194/584 (33%), Positives = 299/584 (51%), Gaps = 20/584 (3%)
Query: 24 CTLHRCSNL-DLV--KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYP 80
C L C + DL K++H +++ D+ V LI + C + SA +F+++P
Sbjct: 201 CVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR 260
Query: 81 NVHLYNSLIRAHALNG-SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
++ +N++I + NG H L FF M+ V PD T ++ AC L +
Sbjct: 261 DIISWNAMISGYFENGMCHEGLEL--FFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
IHA+V GF DI V NSL Y G A +LFS ME +D V+W +MI G
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGS--WREAEKLFSRMERKDIVSWTTMISGYEYN 376
Query: 200 GDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISW---- 251
D A + M + D ++ +L A G+++ EL ++ +IS+
Sbjct: 377 FLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVA 436
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
+ ++ YS+ +D A +F P KN++ WT+II+G EA + +M+ L+
Sbjct: 437 NNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQ 495
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
P+ L + L ACA G L GK+IHA V R + NA +DMY +CG ++ A+
Sbjct: 496 PNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQ 555
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGL 431
F+ + KKD+ SWN ++ G+ GQG +ELF MV PD+ TFI LLC C+ + +
Sbjct: 556 FN--SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQM 613
Query: 432 VDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLL 491
V +G YF+ ME YG+ P ++HY C++DLL R G L+EA + ++ MPV P+ V G LL
Sbjct: 614 VRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALL 672
Query: 492 GACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQK 551
ACR+H+ ++L ++H+F+L G + LL N+YA G W VA VR MK G
Sbjct: 673 NACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTV 732
Query: 552 PSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVG 595
+G S + F D HP++ +I ++ + +VG
Sbjct: 733 DAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVG 776
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 176/388 (45%), Gaps = 43/388 (11%)
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
ED+FV + + R G S+M N+ + VR G+L A+ +F
Sbjct: 94 EDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFG 153
Query: 211 EMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML-------------------------- 244
+M ER++ SWN ++ GYAK G ++A L+ RML
Sbjct: 154 KMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLA 213
Query: 245 --------------QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
+ +I + ++ Y + GD+ AR+LFD+ P ++++ W +ISGY
Sbjct: 214 RGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYF 273
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
E G E L+ M + PD L S+++AC G LG+ IHA V F
Sbjct: 274 ENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
V N+ MY G A +FS+M +KD+VSW +MI G+ + +KA++ + M +
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRME-RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQD 392
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
+PD+ T +L AC G +D G K ++ + +I++ S+ +++
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR-LISYVIVANNLINMYSKCKCIDK 451
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHN 498
A ++ ++P N I +++ R++N
Sbjct: 452 ALDIFHNIP-RKNVISWTSIIAGLRLNN 478
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 169/390 (43%), Gaps = 73/390 (18%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
+A F ++ A VF ++ N+ +N L+ +A G + GV P
Sbjct: 135 FLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKP 194
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
D +T+P +L+ C G L + +H HV ++G+ DI V N+LI Y +CG V A
Sbjct: 195 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV--KSARL 252
Query: 177 LFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF--------------------------D 210
LF M RD ++WN+MI G G +LF D
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 211 EMPERDMVSW-------------NTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG 257
RD+ ++ N++ Y AG +A +LF RM + +I+SW+TM+ G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
Y ++ P+K A Y M++ +KPD+ +
Sbjct: 373 YE-----------YNFLPDK--------------------AIDTYRMMDQDSVKPDEITV 401
Query: 318 ISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG 377
++L+ACA G L G ++H + R V N I+MY+KC C+D A IF +
Sbjct: 402 AAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP- 460
Query: 378 KKDLVSWNSMIHGFGVHGQGEKALELFSSM 407
+K+++SW S+I G ++ + +AL M
Sbjct: 461 RKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 125/284 (44%), Gaps = 36/284 (12%)
Query: 286 ISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRF 345
+ G G ++EA L + M+E + D+ V ++++ C G K+++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 346 RCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFS 405
++ NAF+ M+ + G L A+ +F KM+ +++L SWN ++ G+ G ++A+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMS-ERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 406 SMVHE-GFEPDKYTFIGLLCAC-----------THAGLVDKGR----NYFNSMEKVYGIV 449
M+ G +PD YTF +L C H +V G + N++ +Y
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 450 PQIEHYGCMIDLLSR----------GGHLE--------EAFELLRSMPVEPNAIVVGTLL 491
++ + D + R G+ E E F +R + V+P+ + + +++
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 492 GACRMHNDVELARALSEHLFKL-VPSDPGNFSLLSNIYAQAGDW 534
AC + D L R + ++ D + L+ +Y AG W
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSW 348
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/525 (34%), Positives = 277/525 (52%), Gaps = 21/525 (4%)
Query: 49 QDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFH 108
+D + +I+ ++ R I A+ +F ++P N ++++I NG S F
Sbjct: 134 RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVV-LFRK 192
Query: 109 MQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGG 168
M + P L+K + ++ + V G + ++ N+LI Y + G
Sbjct: 193 MPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVS--GREDLVYAYNTLIVGYGQRGQ 250
Query: 169 VGIDGAMRLFSAMEE---------------RDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
V + A LF + + ++ V+WNSMI ++ GD+ A LFD+M
Sbjct: 251 V--EAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMK 308
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDK 273
+RD +SWNTM+DGY M AF LF M + SW+ MV GY+ G++++AR F+K
Sbjct: 309 DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEK 368
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
PEK+ V W +II+ Y + KEA L+ +M G KPD L S+L+A L LG
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG 428
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGV 393
++H V + V NA I MY++CG + + IF +M K+++++WN+MI G+
Sbjct: 429 MQMHQIVVKTVI-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAF 487
Query: 394 HGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIE 453
HG +AL LF SM G P TF+ +L AC HAGLVD+ + F SM VY I PQ+E
Sbjct: 488 HGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQME 547
Query: 454 HYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKL 513
HY ++++ S G EEA ++ SMP EP+ V G LL ACR++N+V LA +E + +L
Sbjct: 548 HYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRL 607
Query: 514 VPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
P + LL N+YA G W + VR+ M++ +K G+S +
Sbjct: 608 EPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 195/417 (46%), Gaps = 49/417 (11%)
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD---LDGAFKLFDEMP 213
N++I Y + ++ A +LF M +RD VTWN+MI G V G L+ A KLFDEMP
Sbjct: 75 NTMISGYVK--RREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMP 132
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDK 273
RD SWNTM+ GYAK + +A LF++M + N +SWS M+ G+ + G++D A +LF K
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS---ILTACAESGML 330
P K+ +++G + + EA + + G L+S L + ++
Sbjct: 193 MPVKDSSPLCALVAGLIKNERLSEAAWVLGQY---------GSLVSGREDLVYAYNTLIV 243
Query: 331 GLGKKIHASVQRC-------------------RFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
G G++ RC RF + N+ I Y K G + +A +
Sbjct: 244 GYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLL 303
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGL 431
F +M +D +SWN+MI G+ + E A LFS M + D +++ ++ G
Sbjct: 304 FDQMK-DRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGN 358
Query: 432 VDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE---PNAIVVG 488
V+ R+YF + + + + +I + +EA +L M +E P+ +
Sbjct: 359 VELARHYFEKTPEKHTV-----SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLT 413
Query: 489 TLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMK 545
+LL A ++ L + + + K V D + L +Y++ G+ M + +MK
Sbjct: 414 SLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 177/383 (46%), Gaps = 39/383 (10%)
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNII 249
N + ++R G + A +F+++ R+ V+WNTM+ GY K EMN+A +LFD M + +++
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 250 SWSTMVCGYSRAGD---MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME 306
+W+TM+ GY G ++ AR LFD+ P ++ W T+ISGYA+ + EA +L++KM
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP 163
Query: 307 EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLD 366
E ++ + L +K+ + L A + K L
Sbjct: 164 ERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK--------DSSPLCALVAGLIKNERLS 215
Query: 367 AAFGIF----SKMTGKKDLV-SWNSMIHGFGVHGQGEKALELFSSM-----------VHE 410
A + S ++G++DLV ++N++I G+G GQ E A LF + E
Sbjct: 216 EAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRE 275
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
F + ++ ++ A G V R F+ M+ I + MID +E+
Sbjct: 276 RFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI-----SWNTMIDGYVHVSRMED 330
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSD-PGNFSLLSNIYA 529
AF L MP +A ++ +VELAR H F+ P +++ + Y
Sbjct: 331 AFALFSEMP-NRDAHSWNMMVSGYASVGNVELAR----HYFEKTPEKHTVSWNSIIAAYE 385
Query: 530 QAGDWMNVASVRLQMKNAGGQKP 552
+ D+ + ++M N G+KP
Sbjct: 386 KNKDYKEAVDLFIRM-NIEGEKP 407
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 147/337 (43%), Gaps = 39/337 (11%)
Query: 48 HQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFF 107
++D + +++ ++ ++ A + F + P + +NS+I A+ N + F
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKE-AVDLFI 398
Query: 108 HMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCG 167
M EG PD T LL A TG +L L +H V K D+ V N+LI YSRCG
Sbjct: 399 RMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVK-TVIPDVPVHNALITMYSRCG 457
Query: 168 GVGIDGAMRLFSAME-ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDM----VSWNT 222
I + R+F M+ +R+ +TWN+MIGG G+ A LF M + +++ +
Sbjct: 458 --EIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVS 515
Query: 223 MLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLW 282
+L+ A AG +++A F M+ I E + +
Sbjct: 516 VLNACAHAGLVDEAKAQFVSMMSVYKI--------------------------EPQMEHY 549
Query: 283 TTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR 342
+++++ + +G +EA + M +PD V ++L AC +GL ++ R
Sbjct: 550 SSLVNVTSGQGQFEEAMYIITSMP---FEPDKTVWGALLDACRIYNNVGLAHVAAEAMSR 606
Query: 343 CRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK 379
ST + + +MYA G D A + M K+
Sbjct: 607 LEPESSTPYVLLY-NMYADMGLWDEASQVRMNMESKR 642
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 194/651 (29%), Positives = 311/651 (47%), Gaps = 86/651 (13%)
Query: 29 CSNLDLVKQIHAQ-LLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY---PNVHL 84
C +Q+HAQ LL + + +A LI+ ++ + A NVF V ++ L
Sbjct: 66 CLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRL 125
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
+NS+++A+ +G + + + M++ G+ D + P +L+AC L + H V
Sbjct: 126 WNSILKANVSHGLYEN-ALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVG-----------------------------IDGAM 175
+ G E++ V N L+ Y + G +G + A+
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 176 RLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMP------------------ 213
++F M+ D VTW S++ + G + K F M
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVC 304
Query: 214 ---------------------ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWS 252
E + S N ++ Y K G++ A LF ++ I SW+
Sbjct: 305 AELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWN 364
Query: 253 TMVCGYSRAGDMDMARMLFDKCPE--------KNLVLWTTIISGYAEKGFMKEATVLYDK 304
+++ + AG +D A LF + E N+V WT++I G +G ++ + +
Sbjct: 365 SLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQ 424
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
M+ + + + + IL+ CAE L LG++IH V R + V NA ++MYAKCG
Sbjct: 425 MQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGL 484
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
L +F + KDL+SWNS+I G+G+HG EKAL +F M+ GF PD + +L
Sbjct: 485 LSEGSLVFEAIR-DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLS 543
Query: 425 ACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNA 484
AC+HAGLV+KGR F SM K +G+ PQ EHY C++DLL R G L+EA E++++MP+EP
Sbjct: 544 ACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
Query: 485 IVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQM 544
V+G LL +CRMH +V++A ++ L L P G++ LLSNIY+ G W A+VR
Sbjct: 604 CVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALA 663
Query: 545 KNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVG 595
K +K SG+S I F+ + + IY ++ LV + + G
Sbjct: 664 KKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKG 714
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 253/438 (57%), Gaps = 12/438 (2%)
Query: 174 AMRLFSAMEER-DAVTWNSMIGGLVRGGDLDGAFKLFDEMP-----ERDMVSWNTMLDGY 227
A ++FS +E+ + WN++I G G+ AF L+ EM E D ++ ++
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 228 AKAGEMNKAFELFDRMLQWN----IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWT 283
++ + +++ I ++++ Y+ GD+ A +FDK PEK+LV W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 284 TIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRC 343
++I+G+AE G +EA LY +M G+KPD ++S+L+ACA+ G L LGK++H + +
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 344 RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALEL 403
+ N +D+YA+CG ++ A +F +M K VSW S+I G V+G G++A+EL
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNS-VSWTSLIVGLAVNGFGKEAIEL 310
Query: 404 FSSM-VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLL 462
F M EG P + TF+G+L AC+H G+V +G YF M + Y I P+IEH+GCM+DLL
Sbjct: 311 FKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLL 370
Query: 463 SRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFS 522
+R G +++A+E ++SMP++PN ++ TLLGAC +H D +LA + +L P+ G++
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 523 LLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQ 582
LLSN+YA W +V +R QM G +K G S + F + D SHP+SD IY
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 490
Query: 583 MIGRLVHDLRQVGYVPGI 600
+ + LR GYVP I
Sbjct: 491 KLKEMTGRLRSEGYVPQI 508
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 181/347 (52%), Gaps = 17/347 (4%)
Query: 67 ISSAVNVFNQVPYP-NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREG-VYPDNFTYPFL 124
+S A VF+++ P NV ++N+LIR +A G+ S FS + M+ G V PD TYPFL
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSIS-AFSLYREMRVSGLVEPDTHTYPFL 127
Query: 125 LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER 184
+KA T + + L + IH+ V + GF I+V NSL+ Y+ CG V A ++F M E+
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVA--SAYKVFDKMPEK 185
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELF 240
D V WNS+I G G + A L+ EM + D + ++L AK G + +
Sbjct: 186 DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVH 245
Query: 241 DRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
M L N+ S + ++ Y+R G ++ A+ LFD+ +KN V WT++I G A GF K
Sbjct: 246 VYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGK 305
Query: 297 EATVLYDKMEEA-GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV--LN 353
EA L+ ME GL P + + IL AC+ GM+ G + + R ++ ++
Sbjct: 306 EAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFG 364
Query: 354 AFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
+D+ A+ G + A+ M + ++V W +++ VHG + A
Sbjct: 365 CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 155/311 (49%), Gaps = 19/311 (6%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
+++ L + IH+ ++++ +YV L+ ++ C ++SA VF+++P ++ +NS+I
Sbjct: 135 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 194
Query: 90 RAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF 149
A NG P + + M +G+ PD FT LL AC +L L + +H ++ K G
Sbjct: 195 NGFAENGK-PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 253
Query: 150 YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
++ N L+D Y+RCG V + A LF M ++++V+W S+I GL G A +LF
Sbjct: 254 TRNLHSSNVLLDLYARCGRV--EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 210 DEMPERD-----MVSWNTMLDGYAKAGEMNKAFELFDRM-----LQWNIISWSTMVCGYS 259
M + +++ +L + G + + FE F RM ++ I + MV +
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 260 RAGDMDMARMLFDKCP-EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD---DG 315
RAG + A P + N+V+W T++ G A + +++ L+P+ D
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE--FARIQILQLEPNHSGDY 429
Query: 316 VLISILTACAE 326
VL+S + A +
Sbjct: 430 VLLSNMYASEQ 440
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 253/434 (58%), Gaps = 14/434 (3%)
Query: 152 DIFVPNSLIDSYSR----CGGVGIDGAMRLFSAMEERDAVTWNSM------IGGLVRGGD 201
++F+ NS+I +Y+ C + I + L + E D T+ M +G G
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQL-LRKSFELPDRFTFPFMFKSCASLGSCYLGKQ 130
Query: 202 LDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRA 261
+ G F P +V+ N ++D Y K ++ A ++FD M + ++ISW++++ GY+R
Sbjct: 131 VHGHLCKFG--PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARL 188
Query: 262 GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL 321
G M A+ LF +K +V WT +ISGY G EA + +M+ AG++PD+ LIS+L
Sbjct: 189 GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 322 TACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDL 381
+CA+ G L LGK IH +R F T V NA I+MY+KCG + A +F +M GK D+
Sbjct: 249 PSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK-DV 307
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNS 441
+SW++MI G+ HG A+E F+ M +P+ TF+GLL AC+H G+ +G YF+
Sbjct: 308 ISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDM 367
Query: 442 MEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVE 501
M + Y I P+IEHYGC+ID+L+R G LE A E+ ++MP++P++ + G+LL +CR +++
Sbjct: 368 MRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLD 427
Query: 502 LARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXX 561
+A +HL +L P D GN+ LL+NIYA G W +V+ +R ++N +K G S I
Sbjct: 428 VALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVN 487
Query: 562 XXXXXFTVFDHSHP 575
F D+S P
Sbjct: 488 NIVQEFVSGDNSKP 501
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 201/431 (46%), Gaps = 46/431 (10%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
L R + + K+I+A ++ L Q ++ K++ + A +FNQV PNV LY
Sbjct: 17 LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLY 76
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
NS+IRA+ N + + +++ PD FT+PF+ K+C S L + +H H+
Sbjct: 77 NSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
KFG + N+LID Y + + +D A ++F M ERD ++WNS++ G R G + A
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDL-VD-AHKVFDEMYERDVISWNSLLSGYARLGQMKKA 194
Query: 206 FKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML-------QWNIIS-------- 250
LF M ++ +VSW M+ GY G +A + F M + ++IS
Sbjct: 195 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL 254
Query: 251 -------W------------STMVCG-----YSRAGDMDMARMLFDKCPEKNLVLWTTII 286
W T VC YS+ G + A LF + K+++ W+T+I
Sbjct: 255 GSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMI 314
Query: 287 SGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFR 346
SGYA G A +++M+ A +KP+ + +L+AC+ GM G + + + R ++
Sbjct: 315 SGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLR-YFDMMRQDYQ 373
Query: 347 CSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELF 404
K+ ID+ A+ G L+ A I M K D W S++ G + AL
Sbjct: 374 IEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAM 433
Query: 405 SSMVHEGFEPD 415
+V EP+
Sbjct: 434 DHLVE--LEPE 442
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 109/219 (49%), Gaps = 14/219 (6%)
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
F MQ G+ PD + +L +C SL L + IH + E+ GF + V N+LI+ YS+
Sbjct: 229 FREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSK 288
Query: 166 CGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDM----VSWN 221
CG I A++LF ME +D ++W++MI G G+ GA + F+EM + +++
Sbjct: 289 CG--VISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFL 346
Query: 222 TMLDGYAKAGEMNKAFELFDRM-----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPE 276
+L + G + FD M ++ I + ++ +RAG ++ A + P
Sbjct: 347 GLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPM 406
Query: 277 K-NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
K + +W +++S G + A V D + E L+P+D
Sbjct: 407 KPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE--LEPED 443
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 28/217 (12%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
+L+L K IH + + V LI +S C IS A+ +F Q+ +V ++++I
Sbjct: 256 SLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMIS 315
Query: 91 AHALNG-SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACT-------GPSSLPLVQ---M 139
+A +G +H ++ TF MQR V P+ T+ LL AC+ G +++
Sbjct: 316 GYAYHGNAHGAI--ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQ 373
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER-DAVTWNSMIGGLVR 198
I +E +G LID +R G ++ A+ + M + D+ W S++
Sbjct: 374 IEPKIEHYG---------CLIDVLARAG--KLERAVEITKTMPMKPDSKIWGSLLSSCRT 422
Query: 199 GGDLDGAFKLFD---EMPERDMVSWNTMLDGYAKAGE 232
G+LD A D E+ DM ++ + + YA G+
Sbjct: 423 PGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGK 459
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/569 (31%), Positives = 296/569 (52%), Gaps = 14/569 (2%)
Query: 35 VKQIHAQLLKA-HLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHA 93
+ QIHA ++ +L ++ LIA+ IS A VF+++P V +YNS+I ++
Sbjct: 33 ITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYS 92
Query: 94 LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
G +P + M E + PD+ T+ +KAC L + + FG+ D+
Sbjct: 93 -RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDV 151
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
FV +S+++ Y +CG +D A LF M +RD + W +M+ G + G A + + EM
Sbjct: 152 FVCSSVLNLYMKCGK--MDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 214 E----RDMVSWNTMLDGYAKAGE--MNKAFE--LFDRMLQWNIISWSTMVCGYSRAGDMD 265
RD V +L G+ M ++ L+ L N++ +++V Y++ G ++
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 266 MARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA 325
+A +F + K V W ++ISG+A+ G +A +M+ G +PD L+ +L AC+
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329
Query: 326 ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
+ G L G+ +H + + R A +DMY+KCG L ++ IF + G+KDLV WN
Sbjct: 330 QVGSLKTGRLVHCYILK-RHVLDRVTATALMDMYSKCGALSSSREIFEHV-GRKDLVCWN 387
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
+MI +G+HG G++ + LF M EPD TF LL A +H+GLV++G+++F+ M
Sbjct: 388 TMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINK 447
Query: 446 YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARA 505
Y I P +HY C+IDLL+R G +EEA +++ S ++ + LL C H ++ +
Sbjct: 448 YKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDI 507
Query: 506 LSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXX 565
+ + +L P G +L+SN +A A W VA VR M+N +K G S+I
Sbjct: 508 AANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELR 567
Query: 566 XFTVFDHSHPKSDDIYQMIGRLVHDLRQV 594
F + D SH + + Q++ L ++R V
Sbjct: 568 TFLMEDLSHHEHYHMLQVLRNLKTEIRDV 596
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 269/524 (51%), Gaps = 43/524 (8%)
Query: 116 PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM 175
P TY L++ C+ +L + +H H+ GF I + N L+ Y++CG + +D A
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSL-VD-AR 140
Query: 176 RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNK 235
++F M RD +WN M+ G G L+ A KLFDEM E+D SW M+ GY K + +
Sbjct: 141 KVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEE 200
Query: 236 AFELFDRM----------------------------------------LQWNIISWSTMV 255
A L+ M L + + WS+++
Sbjct: 201 ALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLM 260
Query: 256 CGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDG 315
Y + G +D AR +FDK EK++V WT++I Y + +E L+ ++ + +P++
Sbjct: 261 DMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEY 320
Query: 316 VLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM 375
+L ACA+ LGK++H + R F + ++ +DMY KCG +++A +
Sbjct: 321 TFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGC 380
Query: 376 TGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKG 435
K DLVSW S+I G +GQ ++AL+ F ++ G +PD TF+ +L ACTHAGLV+KG
Sbjct: 381 P-KPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKG 439
Query: 436 RNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACR 495
+F S+ + + + +HY C++DLL+R G E+ ++ MP++P+ + ++LG C
Sbjct: 440 LEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCS 499
Query: 496 MHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGA 555
+ +++LA ++ LFK+ P +P + ++NIYA AG W +R +M+ G K G+
Sbjct: 500 TYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGS 559
Query: 556 SSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPG 599
S F D SHP + I + + L +++ GYVP
Sbjct: 560 SWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPA 603
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 170/334 (50%), Gaps = 8/334 (2%)
Query: 166 CGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVS----WN 221
CG + A++L ++ A T+ ++I + L+ K+ + + V WN
Sbjct: 65 CGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWN 124
Query: 222 TMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL 281
+L YAK G + A ++FD M ++ SW+ MV GY+ G ++ AR LFD+ EK+
Sbjct: 125 RLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYS 184
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISI-LTACAESGMLGLGKKIHASV 340
WT +++GY +K +EA VLY M+ + +SI + A A + GK+IH +
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Query: 341 QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
R + ++ +DMY KCGC+D A IF K+ +KD+VSW SMI + + +
Sbjct: 245 VRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIV-EKDVVSWTSMIDRYFKSSRWREG 303
Query: 401 LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMID 460
LFS +V P++YTF G+L AC + G+ M +V G P ++D
Sbjct: 304 FSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVD 362
Query: 461 LLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGAC 494
+ ++ G++E A ++ P +P+ + +L+G C
Sbjct: 363 MYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGC 395
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 143/325 (44%), Gaps = 49/325 (15%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
K+IH +++A L D + L+ + C I A N+F+++ +V + S+I +
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRY-FK 296
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
S FS F + P+ +T+ +L AC ++ L + +H ++ + GF F
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM--- 212
+SL+D Y++CG I+ A + + D V+W S+IGG + G D A K FD +
Sbjct: 357 SSSLVDMYTKCG--NIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 213 -PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS--------------------- 250
+ D V++ +L AG + K E F + + + +S
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQ 474
Query: 251 ----------------WSTMVCGYSRAGDMDM----ARMLFDKCPEKNLVLWTTIISGYA 290
W++++ G S G++D+ A+ LF PE N V + T+ + YA
Sbjct: 475 LKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPE-NPVTYVTMANIYA 533
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDG 315
G +E + +M+E G+ G
Sbjct: 534 AAGKWEEEGKMRKRMQEIGVTKRPG 558
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 112/243 (46%), Gaps = 18/243 (7%)
Query: 26 LHRCSNL---DLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L+ C++L +L KQ+H + + + + L+ ++ C +I SA +V + P P++
Sbjct: 326 LNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDL 385
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPL-VQMIH 141
+ SLI A NG P F + + G PD+ T+ +L ACT + ++ +
Sbjct: 386 VSWTSLIGGCAQNG-QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFY 444
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDA-VTWNSMIGGLVRGG 200
+ EK L+D +R G + + S M + + W S++GG G
Sbjct: 445 SITEKHRLSHTSDHYTCLVDLLARSG--RFEQLKSVISEMPMKPSKFLWASVLGGCSTYG 502
Query: 201 DLD----GAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNII-----SW 251
++D A +LF PE + V++ TM + YA AG+ + ++ RM + + SW
Sbjct: 503 NIDLAEEAAQELFKIEPE-NPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSW 561
Query: 252 STM 254
+ +
Sbjct: 562 TEI 564
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/488 (36%), Positives = 262/488 (53%), Gaps = 20/488 (4%)
Query: 123 FLLKACTGPSSLPLVQM--IHAHVEKFGFYEDI--FVPNSLIDSYSRCGGVGIDGAMRLF 178
L+ C L +Q I +H+E F + F S +S + A LF
Sbjct: 34 LLISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTES-------SMSYARHLF 86
Query: 179 SAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFE 238
AM E D V +NSM G R + F LF E+ E ++ N KA + KA E
Sbjct: 87 EAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALE 146
Query: 239 LFDRM--------LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
++ L N+ T++ Y+ D+D AR +FD+ E +V + +I+GYA
Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYA 206
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
+ EA L+ +M+ LKP++ L+S+L++CA G L LGK IH ++ F K
Sbjct: 207 RRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVK 266
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
V A IDM+AKCG LD A IF KM KD +W++MI + HG+ EK++ +F M E
Sbjct: 267 VNTALIDMFAKCGSLDDAVSIFEKMR-YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSE 325
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
+PD+ TF+GLL AC+H G V++GR YF+ M +GIVP I+HYG M+DLLSR G+LE+
Sbjct: 326 NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLED 385
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQ 530
A+E + +P+ P ++ LL AC HN+++LA +SE +F+L S G++ +LSN+YA+
Sbjct: 386 AYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYAR 445
Query: 531 AGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHD 590
W V S+R MK+ K G SSI F D + +++ + +V +
Sbjct: 446 NKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKE 505
Query: 591 LRQVGYVP 598
L+ GYVP
Sbjct: 506 LKLSGYVP 513
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 213/452 (47%), Gaps = 37/452 (8%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRH------ISSAVNVFNQVPY 79
+ +C++L + QI A +K+H+ +D+ KLI + C +S A ++F +
Sbjct: 36 ISKCNSLRELMQIQAYAIKSHI-EDVSFVAKLI---NFCTESPTESSMSYARHLFEAMSE 91
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P++ ++NS+ R ++ ++P FS F + +G+ PDN+T+P LLKAC +L +
Sbjct: 92 PDIVIFNSMARGYS-RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
+H K G ++++V +LI+ Y+ C V D A +F + E V +N+MI G R
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDV--DSARCVFDRIVEPCVVCYNAMITGYARR 208
Query: 200 GDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISW---- 251
+ A LF EM + + ++ ++L A G ++ + + + +
Sbjct: 209 NRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVN 268
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
+ ++ +++ G +D A +F+K K+ W+ +I YA G +++ +++++M ++
Sbjct: 269 TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ 328
Query: 312 PDDGVLISILTACAESGMLGLGKKIHAS-VQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
PD+ + +L AC+ +G + G+K + V + S K + +D+ ++ G L+ A+
Sbjct: 329 PDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 371 IFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD-----KYTFIGLLCA 425
K+ + W ++ H L+L + FE D Y + L A
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNN----LDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Query: 426 CTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC 457
+K Y +S+ KV ++ GC
Sbjct: 445 ------RNKKWEYVDSLRKVMKDRKAVKVPGC 470
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/481 (34%), Positives = 261/481 (54%), Gaps = 22/481 (4%)
Query: 124 LLKACTGPSSLPLVQMIHAHV--EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAM 181
LL+ CT L L + +A ++F F + + +++ +YS + A F M
Sbjct: 62 LLRFCT----LRLCNLSYARFIFDRFSF-PNTHLYAAVLTAYSSSLPLHASSAFSFFRLM 116
Query: 182 EERDAVTWNSMIGGLVRGGD--LDGAFK-------LFDEMPERDMVSWNTMLDGYAKA-G 231
R N I LV L AF LF +V +L YA +
Sbjct: 117 VNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVS 176
Query: 232 EMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAE 291
+ A +LFD M + N++SW+ M+ GY+R+GD+ A LF+ PE+++ W I++ +
Sbjct: 177 HITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQ 236
Query: 292 KGFMKEATVLYDKM-EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
G EA L+ +M E ++P++ ++ +L+ACA++G L L K IHA R
Sbjct: 237 NGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVF 296
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH- 409
V N+ +D+Y KCG L+ A +F KM KK L +WNSMI+ F +HG+ E+A+ +F M+
Sbjct: 297 VSNSLVDLYGKCGNLEEASSVF-KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKL 355
Query: 410 --EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGH 467
+PD TFIGLL ACTH GLV KGR YF+ M +GI P+IEHYGC+IDLL R G
Sbjct: 356 NINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGR 415
Query: 468 LEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNI 527
+EA E++ +M ++ + + G+LL AC++H ++LA ++L L P++ G ++++N+
Sbjct: 416 FDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANL 475
Query: 528 YAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRL 587
Y + G+W R +K+ KP G S I F D SHP++++IY ++ L
Sbjct: 476 YGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Query: 588 V 588
+
Sbjct: 536 I 536
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 210/448 (46%), Gaps = 54/448 (12%)
Query: 25 TLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLI--AAFSLCRHISSAVNVFNQVPYPNV 82
+ + +L+ +KQ+ + ++ + L ++ KL+ LC ++S A +F++ +PN
Sbjct: 30 VISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLC-NLSYARFIFDRFSFPNT 88
Query: 83 HLYNSLIRAHALNGS-HPSLTFSTFFHMQREGV-YPDNFTYPFLLKACTGPSSLPLVQMI 140
HLY +++ A++ + H S FS F M V P++F YP +LK+ SS ++
Sbjct: 89 HLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLV 148
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
H H+ K GF+ + V +L+ SY+ I A +LF M ER+ V+W +M+ G R G
Sbjct: 149 HTHLFKSGFHLYVVVQTALLHSYASSVS-HITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 201 DLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM----------------- 243
D+ A LF++MPERD+ SWN +L + G +A LF RM
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 244 -----------------------LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
L ++ +++V Y + G+++ A +F +K+L
Sbjct: 268 SACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLT 327
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAG---LKPDDGVLISILTACAESGMLGLGKKIH 337
W ++I+ +A G +EA ++++M + +KPD I +L AC G++ G+ +
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRG-Y 386
Query: 338 ASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHG 395
+ RF ++ ID+ + G D A + S M K D W S+++ +HG
Sbjct: 387 FDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
Query: 396 QGEKALELFSSMVHEGFEPDKYTFIGLL 423
+ A ++V P+ ++ ++
Sbjct: 447 HLDLAEVAVKNLV--ALNPNNGGYVAMM 472
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 26/218 (11%)
Query: 23 LCTLHRCS---NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY 79
+C L C+ L L K IHA + L D++V+ L+ + C ++ A +VF
Sbjct: 264 VCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASK 323
Query: 80 PNVHLYNSLIRAHALNGSHPS--LTFSTFFHMQREGVYPDNFTYPFLLKACT-------G 130
++ +NS+I AL+G F + + PD+ T+ LL ACT G
Sbjct: 324 KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKG 383
Query: 131 PSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER-DAVTW 189
L+ +FG I LID R G D A+ + S M+ + D W
Sbjct: 384 RGYFDLM------TNRFGIEPRIEHYGCLIDLLGRAG--RFDEALEVMSTMKMKADEAIW 435
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGY 227
S++ G LD A E+ +++V+ N GY
Sbjct: 436 GSLLNACKIHGHLDLA-----EVAVKNLVALNPNNGGY 468
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 167/504 (33%), Positives = 269/504 (53%), Gaps = 16/504 (3%)
Query: 109 MQREGVYPDNFTYPFLLKACTGPSS---LPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
M + G+ D++ L C +S LP Q++ ++ D F+ N +I +S
Sbjct: 37 MLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR----PDTFLWNLMIRGFS- 91
Query: 166 CGGVGIDGAM---RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMV 218
C + R+ + +A T+ S++ + ++ ++ E D+
Sbjct: 92 CSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVY 151
Query: 219 SWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKN 278
+ N++++ YA G A LFDR+ + + +SW++++ GY +AG MD+A LF K EKN
Sbjct: 152 AVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKN 211
Query: 279 LVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA 338
+ WTT+ISGY + KEA L+ +M+ + ++PD+ L + L+ACA+ G L GK IH+
Sbjct: 212 AISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHS 271
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+ + R R + + IDMYAKCG ++ A +F K KK + +W ++I G+ HG G
Sbjct: 272 YLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF-KNIKKKSVQAWTALISGYAYHGHGR 330
Query: 399 KALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCM 458
+A+ F M G +P+ TF +L AC++ GLV++G+ F SME+ Y + P IEHYGC+
Sbjct: 331 EAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390
Query: 459 IDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDP 518
+DLL R G L+EA ++ MP++PNA++ G LL ACR+H ++EL + E L + P
Sbjct: 391 VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHG 450
Query: 519 GNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSD 578
G + +NI+A W A R MK G K G S+I F D SHP+ +
Sbjct: 451 GRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIE 510
Query: 579 DIYQMIGRLVHDLRQVGYVPGIYQ 602
I + L + GYVP + +
Sbjct: 511 KIQSKWRIMRRKLEENGYVPELEE 534
Score = 191 bits (486), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 210/441 (47%), Gaps = 52/441 (11%)
Query: 9 IPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHIS 68
I FS L E + L RCS + +KQIHA++LK L QD Y K + S C +
Sbjct: 4 ISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFL---SFCISST 60
Query: 69 S------AVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYP 122
S A VF+ P+ L+N +IR + + P + + M + +T+P
Sbjct: 61 SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCS-DEPERSLLLYQRMLCSSAPHNAYTFP 119
Query: 123 FLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
LLKAC+ S+ IHA + K G+ D++ NSLI+SY+ G + A LF +
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKL--AHLLFDRIP 177
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDR 242
E D V+WNS+I G V+ G +D A LF +M E++ +SW TM+ GY +A +A +LF
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 243 M---------------------------------------LQWNIISWSTMVCGYSRAGD 263
M ++ + + ++ Y++ G+
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
M+ A +F +K++ WT +ISGYA G +EA + +M++ G+KP+ ++LTA
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTA 357
Query: 324 CAESGMLGLGKKIHASVQR-CRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLV 382
C+ +G++ GK I S++R + + + +D+ + G LD A +M K + V
Sbjct: 358 CSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAV 417
Query: 383 SWNSMIHGFGVHGQGEKALEL 403
W +++ +H E E+
Sbjct: 418 IWGALLKACRIHKNIELGEEI 438
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 181/595 (30%), Positives = 287/595 (48%), Gaps = 76/595 (12%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
SN+ + +HA +K L +YV L+ + I + VF+++P+ N + ++I
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAII 181
Query: 90 RAHALNGSHPS-LTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFG 148
G + LT+ F M R D +T+ LKAC G + + IH HV G
Sbjct: 182 TGLVHAGRYKEGLTY--FSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 149 FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKL 208
F + V NSL Y+ CG ++ L
Sbjct: 240 FVTTLCVANSLATMYTECG---------------------------------EMQDGLCL 266
Query: 209 FDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM------------------------L 244
F+ M ERD+VSW +++ Y + G+ KA E F +M L
Sbjct: 267 FENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRL 326
Query: 245 QW------NIISW---------STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGY 289
W N++S ++M+ YS G++ A +LF ++++ W+TII GY
Sbjct: 327 VWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGY 386
Query: 290 AEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCST 349
+ GF +E + M ++G KP D L S+L+ ++ G+++HA ++
Sbjct: 387 CQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNS 446
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
V ++ I+MY+KCG + A IF + T + D+VS +MI+G+ HG+ ++A++LF +
Sbjct: 447 TVRSSLINMYSKCGSIKEASMIFGE-TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLK 505
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLE 469
GF PD TFI +L ACTH+G +D G +YFN M++ Y + P EHYGCM+DLL R G L
Sbjct: 506 VGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLS 565
Query: 470 EAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYA 529
+A +++ M + + +V TLL AC+ D+E R +E + +L P+ L+NIY+
Sbjct: 566 DAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYS 625
Query: 530 QAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMI 584
G+ A+VR MK G K G SSI F D HP+S+DIY ++
Sbjct: 626 STGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNIL 680
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 223/473 (47%), Gaps = 33/473 (6%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLY-VAPKLIAAFSLCRHISSAVN--------- 72
+ ++ C + LL+ + +++ ++ +++ F H+ S +N
Sbjct: 2 ISSVRNCGTIQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQ 61
Query: 73 VFNQVPYPNVHLYNSLIRAHAL-NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGP 131
VF+++P+ ++ + S+I+ + N S +L + + V PD +LKAC
Sbjct: 62 VFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQS 121
Query: 132 SSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNS 191
S++ + +HA+ K ++V +SL+D Y R G ID + R+FS M R+AVTW +
Sbjct: 122 SNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVG--KIDKSCRVFSEMPFRNAVTWTA 179
Query: 192 MIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFEL----FDRMLQWN 247
+I GLV G F EM + +S D Y A + L + + + +
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELS-----DTYTFAIALKACAGLRQVKYGKAIHTH 234
Query: 248 II--SWSTMVC-------GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEA 298
+I + T +C Y+ G+M LF+ E+++V WT++I Y G +A
Sbjct: 235 VIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKA 294
Query: 299 TVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDM 358
+ KM + + P++ S+ +ACA L G+++H +V S V N+ + M
Sbjct: 295 VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354
Query: 359 YAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
Y+ CG L +A +F M +D++SW+++I G+ G GE+ + FS M G +P +
Sbjct: 355 YSTCGNLVSASVLFQGMRC-RDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
LL + +++ GR +++ +G+ +I++ S+ G ++EA
Sbjct: 414 LASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCGSIKEA 465
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 179/524 (34%), Positives = 269/524 (51%), Gaps = 52/524 (9%)
Query: 121 YPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSA 180
Y L+ C +L + +HAH+ K G + + N+L++ Y +CG A+++F
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAAS--HALQVFDE 63
Query: 181 MEERDAVTWNSMIGGLVRG------------------------------------GDLDG 204
M RD + W S++ L + G +D
Sbjct: 64 MPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDH 123
Query: 205 AFK-----LFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYS 259
+ + E ++V ++++D YAK G +N A +FD + N ISW+ MV GY+
Sbjct: 124 GRQVHCHFIVSEYANDEVVK-SSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYA 182
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP-DDGVLI 318
++G + A LF P KNL WT +ISG+ + G EA ++ +M + D VL
Sbjct: 183 KSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLS 242
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
SI+ ACA G+++H V F + NA IDMYAKC + AA IFS+M
Sbjct: 243 SIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR-H 301
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY 438
+D+VSW S+I G HGQ EKAL L+ MV G +P++ TF+GL+ AC+H G V+KGR
Sbjct: 302 RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGREL 361
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
F SM K YGI P ++HY C++DLL R G L+EA L+ +MP P+ LL AC+
Sbjct: 362 FQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421
Query: 499 DVELARALSEHL---FKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGA 555
++ +++HL FKL DP + LLSNIYA A W V+ R ++ +K G
Sbjct: 422 RGQMGIRIADHLVSSFKL--KDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGH 479
Query: 556 SSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLR-QVGYVP 598
SS+ F + SHP +DI++++ +L ++R + GYVP
Sbjct: 480 SSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVP 523
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 221/474 (46%), Gaps = 50/474 (10%)
Query: 15 PRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVF 74
P L + +LC +R L K +HA ++K + Q +A L+ + C S A+ VF
Sbjct: 4 PHYLHQLQLCARNR--TLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVF 61
Query: 75 NQVPYPNVHLYNSLIRA-HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSS 133
+++P+ + + S++ A + N S +L+ + G+ PD+F + L+KAC S
Sbjct: 62 DEMPHRDHIAWASVLTALNQANLSGKTLSVFSSV-GSSSGLRPDDFVFSALVKACANLGS 120
Query: 134 LPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMI 193
+ + +H H + D V +SL+D Y++CG ++ A +F ++ ++ ++W +M+
Sbjct: 121 IDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGL--LNSAKAVFDSIRVKNTISWTAMV 178
Query: 194 GGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----- 248
G + G + A +LF +P +++ SW ++ G+ ++G+ +AF +F M + +
Sbjct: 179 SGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDP 238
Query: 249 ISWSTMV--CG---------------------------------YSRAGDMDMARMLFDK 273
+ S++V C Y++ D+ A+ +F +
Sbjct: 239 LVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSR 298
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
+++V WT++I G A+ G ++A LYD M G+KP++ + ++ AC+ G + G
Sbjct: 299 MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKG 358
Query: 334 KKIHASVQR-CRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFG 392
+++ S+ + R S + +D+ + G LD A + M D +W +++
Sbjct: 359 RELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACK 418
Query: 393 VHGQGEKALELFSSMVHEGFEPDKYTFI---GLLCACTHAGLVDKGRNYFNSME 443
G+G+ + + +V D T+I + + + G V + R ME
Sbjct: 419 RQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEME 472
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 289/568 (50%), Gaps = 18/568 (3%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+QIH ++K LH D YV L++ +S C + A VF+ V + ++N+++ A+A N
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
S F M+++ V PD+FT ++ C+ + +HA + K +
Sbjct: 352 DYGYS-ALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI 410
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM--- 212
++L+ YS+CG A +F +MEE+D V W S+I GL + G A K+F +M
Sbjct: 411 ESALLTLYSKCGC--DPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD 468
Query: 213 -----PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ----WNIISWSTMVCGYSRAGD 263
P+ D+++ ++ + A + ++ M++ N+ S+++ YS+ G
Sbjct: 469 DDSLKPDSDIMT--SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGL 526
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+MA +F +N+V W ++IS Y+ + + L++ M G+ PD + S+L A
Sbjct: 527 PEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
+ + L GK +H R T + NA IDMY KCG A IF KM K L++
Sbjct: 587 ISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ-HKSLIT 645
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
WN MI+G+G HG AL LF M G PD TF+ L+ AC H+G V++G+N F M+
Sbjct: 646 WNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMK 705
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
+ YGI P +EHY M+DLL R G LEEA+ +++MP+E ++ + LL A R H++VEL
Sbjct: 706 QDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELG 765
Query: 504 RALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXX 563
+E L ++ P + L N+Y +AG A + MK G K G S I
Sbjct: 766 ILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDR 825
Query: 564 XXXFTVFDHSHPKSDDIYQMIGRLVHDL 591
F S P +I+ ++ RL ++
Sbjct: 826 TNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 237/524 (45%), Gaps = 35/524 (6%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFN-------QVPYPNV 82
+NL K IH ++ D ++A L+ + C + AV VF+ V +V
Sbjct: 74 TNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDV 133
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQ--MI 140
++NS+I + F M GV PD F+ ++ + + I
Sbjct: 134 TVWNSMIDGY-FKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQI 192
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER-DAVTWNSMIGGLVRG 199
H + + D F+ +LID Y + G+ ID A R+F +E++ + V WN MI G
Sbjct: 193 HGFMLRNSLDTDSFLKTALIDMYFKF-GLSID-AWRVFVEIEDKSNVVLWNVMIVGFGGS 250
Query: 200 GDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISW-------- 251
G + + L+ + +T G A ++ F R + +++
Sbjct: 251 GICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSEN-SGFGRQIHCDVVKMGLHNDPYV 309
Query: 252 -STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
++++ YS+ G + A +F +K L +W +++ YAE + A L+ M + +
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
PD L ++++ C+ G+ GK +HA + + + ++ + +A + +Y+KCGC A+
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 371 IFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMV--HEGFEPDKYTFIGLLCACTH 428
+F M +KD+V+W S+I G +G+ ++AL++F M + +PD + AC
Sbjct: 430 VFKSME-EKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAG 488
Query: 429 AGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVG 488
+ G SM K G+V + +IDL S+ G E A ++ SM E N +
Sbjct: 489 LEALRFGLQVHGSMIKT-GLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWN 546
Query: 489 TLLGACRMHNDVELARALSEHLFKLVPSD---PGNFSLLSNIYA 529
+++ +C N++ LS LF L+ S P + S+ S + A
Sbjct: 547 SMI-SCYSRNNLP---ELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 188/454 (41%), Gaps = 74/454 (16%)
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
NS IRA G + H + FT+P LLKAC+ ++L + IH V
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
G+ D F+ SL++ Y +CG +D A+++F W+ G+
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGF--LDYAVQVFDG--------WSQSQSGV--------- 128
Query: 206 FKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----ISWSTMVCGYSRA 261
RD+ WN+M+DGY K + F RML + + S S +V +
Sbjct: 129 -------SARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 262 GD--------------------------------------MDMARMLFDKCPEKNLVLWT 283
G+ +D R+ + + N+VLW
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 284 TIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRC 343
+I G+ G + + LY + +K L AC++S G G++IH V +
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 344 RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALEL 403
V + + MY+KCG + A +FS + K+ L WN+M+ + + G AL+L
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKR-LEIWNAMVAAYAENDYGYSALDL 360
Query: 404 FSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSM-EKVYGIVPQIEHYGCMIDLL 462
F M + PD +T ++ C+ GL + G++ + ++ IE ++ L
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLY 418
Query: 463 SRGGHLEEAFELLRSMPVEPNAIVVGTLL-GACR 495
S+ G +A+ + +SM E + + G+L+ G C+
Sbjct: 419 SKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCK 451
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 295 bits (755), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 277/526 (52%), Gaps = 72/526 (13%)
Query: 109 MQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGG 168
+Q G++ D+ TY L+K C ++ +I H+ G +F+ N LI+ Y
Sbjct: 52 LQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMY----- 106
Query: 169 VGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYA 228
V+ L+ A +LFD+MP+R+++SW TM+ Y+
Sbjct: 107 ----------------------------VKFNLLNDAHQLFDQMPQRNVISWTTMISAYS 138
Query: 229 KAGEMNKAFELFDRMLQ----WNIISWSTMV-------------CG-------------- 257
K KA EL ML+ N+ ++S+++ CG
Sbjct: 139 KCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRS 198
Query: 258 -----YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP 312
+++ G+ + A +FD+ + ++W +II G+A+ A L+ +M+ AG
Sbjct: 199 ALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIA 258
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
+ L S+L AC +L LG + H + ++ + NA +DMY KCG L+ A +F
Sbjct: 259 EQATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNALVDMYCKCGSLEDALRVF 316
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
++M ++D+++W++MI G +G ++AL+LF M G +P+ T +G+L AC+HAGL+
Sbjct: 317 NQMK-ERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLL 375
Query: 433 DKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLG 492
+ G YF SM+K+YGI P EHYGCMIDLL + G L++A +LL M EP+A+ TLLG
Sbjct: 376 EDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Query: 493 ACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKP 552
ACR+ ++ LA ++ + L P D G ++LLSNIYA + W +V +R +M++ G +K
Sbjct: 436 ACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE 495
Query: 553 SGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
G S I F + D+SHP+ ++ + + +L+H L +GYVP
Sbjct: 496 PGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVP 541
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 150/308 (48%), Gaps = 17/308 (5%)
Query: 25 TLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHL 84
L C+ + V+ +H ++K L D++V LI F+ A++VF+++ + +
Sbjct: 168 VLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
+NS+I A N S + F M+R G + T +L+ACTG + L L H H+
Sbjct: 228 WNSIIGGFAQN-SRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDG 204
K+ +D+ + N+L+D Y +CG ++ A+R+F+ M+ERD +TW++MI GL + G
Sbjct: 287 VKYD--QDLILNNALVDMYCKCG--SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 205 AFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-----WSTMV 255
A KLF+ M + ++ +L + AG + + F M + I + M+
Sbjct: 343 ALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMI 402
Query: 256 CGYSRAGDMDMARMLFDKCP-EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
+AG +D A L ++ E + V W T++ + M A Y + L P+D
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAE--YAAKKVIALDPED 460
Query: 315 GVLISILT 322
++L+
Sbjct: 461 AGTYTLLS 468
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 191/599 (31%), Positives = 312/599 (52%), Gaps = 35/599 (5%)
Query: 29 CSNLDLV------KQIHAQ-LLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
CSNL + KQ+HA L K L+ ++ L+A + ++S+ + +
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKGELNS--FIINTLVAMYGKLGKLASSKVLLGSFGGRD 266
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
+ +N+++ + N M EGV PD FT +L AC+ L + +H
Sbjct: 267 LVTWNTVLSSLCQNEQLLE-ALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 142 AHVEKFG-FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
A+ K G E+ FV ++L+D Y C V + G R+F M +R WN+MI G +
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQV-LSGR-RVFDGMFDRKIGLWNAMIAGYSQNE 383
Query: 201 DLDGAFKLFDEMPER-DMVSWNTMLDGYAKAGEMNKAFE--------LFDRMLQWNIISW 251
A LF M E +++ +T + G A + AF + R L +
Sbjct: 384 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME----- 306
+T++ YSR G +D+A +F K +++LV W T+I+GY ++A +L KM+
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 307 ------EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYA 360
LKP+ L++IL +CA L GK+IHA + V +A +DMYA
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 361 KCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFI 420
KCGCL + +F ++ +K++++WN +I +G+HG G++A++L M+ +G +P++ TFI
Sbjct: 564 KCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFI 622
Query: 421 GLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPV 480
+ AC+H+G+VD+G F M+ YG+ P +HY C++DLL R G ++EA++L+ MP
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Query: 481 EPN-AIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVAS 539
+ N A +LLGA R+HN++E+ +++L +L P+ ++ LL+NIY+ AG W
Sbjct: 683 DFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATE 742
Query: 540 VRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
VR MK G +K G S I F D SHP+S+ + + L +R+ GYVP
Sbjct: 743 VRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVP 801
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 142/560 (25%), Positives = 249/560 (44%), Gaps = 79/560 (14%)
Query: 40 AQLL--KAHLHQDLYVAPKLIAAFSLCRHISSAVNVF---NQVPYPNVHLYNSLIRAHAL 94
+QLL H H L A A + +S A ++F ++ P + L S +R++ L
Sbjct: 19 SQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWIDLLRSKVRSNLL 78
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYED-I 153
+ T+ M G+ PDN+ +P LLKA + L + IHAHV KFG+ D +
Sbjct: 79 REA-----VLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSV 133
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
V N+L++ Y +CG G ++F + ER+ V+WNS+I L + A + F M
Sbjct: 134 TVANTLVNLYRKCGDFG--AVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCML 191
Query: 214 ERDMVSWNTMLDGYAKA------------GEMNKAFELFDRMLQWNIISWSTMVCGYSRA 261
+ ++ + L A G+ A+ L R + N +T+V Y +
Sbjct: 192 DENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL--RKGELNSFIINTLVAMYGKL 249
Query: 262 GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL 321
G + +++L ++LV W T++S + + EA +M G++PD+ + S+L
Sbjct: 250 GKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVL 309
Query: 322 TACAESGMLGLGKKIHA-SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKD 380
AC+ ML GK++HA +++ ++ V +A +DMY C + + +F M +K
Sbjct: 310 PACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK- 368
Query: 381 LVSWNSMIHGFGVHGQGEKALELFSSMVHE-GFEPDKYTFIGLLCACTHAGL-------- 431
+ WN+MI G+ + ++AL LF M G + T G++ AC +G
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 432 -------VDKGRNYFNSMEKVYGIVPQIE---------------HYGCMIDLLSRGGHLE 469
+D+ R N++ +Y + +I+ + MI H E
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHE 488
Query: 470 EAFELLRSM--------------PVEPNAIVVGTLLGACRMHNDVELARALSEHLFKL-- 513
+A LL M ++PN+I + T+L +C + LA+ H + +
Sbjct: 489 DALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS--ALAKGKEIHAYAIKN 546
Query: 514 -VPSDPGNFSLLSNIYAQAG 532
+ +D S L ++YA+ G
Sbjct: 547 NLATDVAVGSALVDMYAKCG 566
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 282/546 (51%), Gaps = 32/546 (5%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHL----YNSLIRAHALNGSHPSLTFSTFFHMQRE 112
+I S R+ SAV P+ NV L Y SL S + S + M R
Sbjct: 1 MIVVTSFVRN--SAVAAVASTPW-NVRLRELAYQSLF----------SESISLYRSMLRS 47
Query: 113 GVYPDNFTYPFLLKACTGPSSLPLV-QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGI 171
G PD F++PF+LK+C S LP+ Q +H HV K G + FV +LI Y +CG V
Sbjct: 48 GSSPDAFSFPFILKSCASLS-LPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVA- 105
Query: 172 DGAMRLFSAMEERD--AVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAK 229
A ++F + +V +N++I G + A +F M E + + + G
Sbjct: 106 -DARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVP 164
Query: 230 AGEMNKAFELFDRM--------LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL 281
+ + L + L + ++ + Y + G ++ R LFD+ P K L+
Sbjct: 165 LCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLIT 224
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ 341
W +ISGY++ G + LY++M+ +G+ PD L+S+L++CA G +G ++ V+
Sbjct: 225 WNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVE 284
Query: 342 RCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKAL 401
F + V NA I MYA+CG L A +F M K LVSW +MI +G+HG GE L
Sbjct: 285 SNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP-VKSLVSWTAMIGCYGMHGMGEIGL 343
Query: 402 ELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDL 461
LF M+ G PD F+ +L AC+H+GL DKG F +M++ Y + P EHY C++DL
Sbjct: 344 MLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDL 403
Query: 462 LSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNF 521
L R G L+EA E + SMPVEP+ V G LLGAC++H +V++A + + P++ G +
Sbjct: 404 LGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYY 463
Query: 522 SLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIY 581
L+SNIY+ + + + +R+ M+ +K G S + F D SH ++++++
Sbjct: 464 VLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVH 523
Query: 582 QMIGRL 587
+M+ L
Sbjct: 524 RMLDEL 529
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 304/565 (53%), Gaps = 33/565 (5%)
Query: 49 QDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFH 108
+DL+V I+ ++ I S+ VF+ N+ ++N++I + N L S
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN---DCLVESIELF 305
Query: 109 MQREG---VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE-DIFVPNSLIDSYS 164
++ G + D TY A + + L + H V K F E I + NSL+ YS
Sbjct: 306 LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSK-NFRELPIVIVNSLMVMYS 364
Query: 165 RCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSW 220
RCG V + +F +M ERD V+WN+MI V+ G D L EM ++ D ++
Sbjct: 365 RCGSV--HKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITV 422
Query: 221 NTMLDGYA-----KAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKC- 274
+L + + G+ AF L + +Q+ ++ S ++ YS++G + +++ LF+
Sbjct: 423 TALLSAASNLRNKEIGKQTHAF-LIRQGIQFEGMN-SYLIDMYSKSGLIRISQKLFEGSG 480
Query: 275 -PEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
E++ W ++ISGY + G ++ +++ KM E ++P+ + SIL AC++ G + LG
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGV 393
K++H R + V +A +DMY+K G + A +FS+ T +++ V++ +MI G+G
Sbjct: 541 KQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ-TKERNSVTYTTMILGYGQ 599
Query: 394 HGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIE 453
HG GE+A+ LF SM G +PD TF+ +L AC+++GL+D+G F M +VY I P E
Sbjct: 600 HGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSE 659
Query: 454 HYGCMIDLLSRGGHLEEAFELLRSMPVEPN-AIVVGTLLGACRMHNDVELARALSEHLFK 512
HY C+ D+L R G + EA+E ++ + E N A + G+LLG+C++H ++ELA +SE L K
Sbjct: 660 HYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAK 719
Query: 513 LVPSDPG-NFS----LLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXF 567
D G NFS LLSN+YA+ W +V VR M+ G +K G S I F
Sbjct: 720 F---DKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCF 776
Query: 568 TVFDHSHPKSDDIYQMIGRLVHDLR 592
D HP S +IY +I L D+R
Sbjct: 777 VSRDQEHPHSSEIYDVIDGLAKDMR 801
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 235/520 (45%), Gaps = 64/520 (12%)
Query: 70 AVNVFNQVPYPNVHLYNSLIRAHALNG-SHPSLTFSTFFHMQREGVYP--DNFTYPFLLK 126
A +F+ +P P L+N++I N H +L F + M++ + D +TY LK
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLF--YSRMKKTAPFTNCDAYTYSSTLK 115
Query: 127 ACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV----GIDGAMRLFSAME 182
AC +L + +H H+ + V NSL++ Y C D ++F M
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMR 175
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAFE 238
++ V WN++I V+ G A + F M ++ VS+ + + + + KA
Sbjct: 176 RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANV 235
Query: 239 LFDRMLQW------NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEK 292
+ ML+ ++ S+ + Y+ GD++ +R +FD C E+N+ +W T+I Y +
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Query: 293 GFMKEATVLYDKMEEAGLK---PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCST 349
+ E+ L+ +E G K D+ + +A + + LG++ H V +
Sbjct: 296 DCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 353
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
++N+ + MY++CG + +FG+F M ++D+VSWN+MI F +G ++ L L M
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMR-ERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 410 EGFEPDKYTFIGLLCAC-----------THAGLVDKG------RNYFNSMEKVYGIVPQI 452
+GF+ D T LL A THA L+ +G +Y M G++
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRIS 472
Query: 453 EH--------------YGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIVVGTLLGACR 495
+ + MI ++ GH E+ F + R M + PNA+ V ++L AC
Sbjct: 473 QKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACS 532
Query: 496 MHNDVELARALSEHLFKLVPSDPGNF---SLLSNIYAQAG 532
V+L + L H F + N S L ++Y++AG
Sbjct: 533 QIGSVDLGKQL--HGFSIRQYLDQNVFVASALVDMYSKAG 570
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 18/383 (4%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
++L +Q H + K + + L+ +S C + + VF + +V +N++I
Sbjct: 333 QVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMIS 392
Query: 91 AHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF- 149
A NG + MQ++G D T LL A + + + + HA + + G
Sbjct: 393 AFVQNGLDDE-GLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ 451
Query: 150 YEDIFVPNS-LIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKL 208
+E + NS LID YS+ G + I + S ERD TWNSMI G + G + F +
Sbjct: 452 FEGM---NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508
Query: 209 FDEMPERDM----VSWNTMLDGYAKAGEMNKAFEL----FDRMLQWNIISWSTMVCGYSR 260
F +M E+++ V+ ++L ++ G ++ +L + L N+ S +V YS+
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 568
Query: 261 AGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISI 320
AG + A +F + E+N V +TT+I GY + G + A L+ M+E+G+KPD +++
Sbjct: 569 AGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAV 628
Query: 321 LTACAESGMLGLGKKIHASVQRC-RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK 379
L+AC+ SG++ G KI ++ + S++ DM + G ++ A+ F K G++
Sbjct: 629 LSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYE-FVKGLGEE 687
Query: 380 DLVS--WNSMIHGFGVHGQGEKA 400
++ W S++ +HG+ E A
Sbjct: 688 GNIAELWGSLLGSCKLHGELELA 710
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 12/247 (4%)
Query: 262 GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG--LKPDDGVLIS 319
G+ +AR LFD P+ VLW TII G+ EA + Y +M++ D S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 320 ILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKC----GCL--DAAFGIFS 373
L ACAE+ L GK +H + RC S V N+ ++MY C C D +F
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 374 KMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVD 433
M +K++V+WN++I + G+ +A F M+ +P +F+ + A + + +
Sbjct: 173 NMR-RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIK 231
Query: 434 KGRNYFNSMEKVYG-IVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLG 492
K ++ M K+ V + I + + G +E + + S VE N V T++G
Sbjct: 232 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VERNIEVWNTMIG 290
Query: 493 ACRMHND 499
+ ND
Sbjct: 291 V-YVQND 296
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 126/323 (39%), Gaps = 82/323 (25%)
Query: 11 TWFSPRRLLEEKL--------CTLHRCSNL---DLVKQIHAQLLKAHLHQDLYVAPKLIA 59
T+ R++LE+ + L CS + DL KQ+H ++ +L Q+++VA L+
Sbjct: 505 TFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVD 564
Query: 60 AFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNF 119
+S I A ++F+Q N Y ++I + +G S F MQ G+ PD
Sbjct: 565 MYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGER-AISLFLSMQESGIKPDAI 623
Query: 120 TYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFS 179
T+ +L AC SYS ID +++F
Sbjct: 624 TFVAVLSAC---------------------------------SYSGL----IDEGLKIFE 646
Query: 180 AMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFEL 239
M E +++ P + + + D + G +N+A+E
Sbjct: 647 EMRE------------------------VYNIQPSSE--HYCCITDMLGRVGRVNEAYEF 680
Query: 240 FDRMLQWNIIS--WSTMVCGYSRAGDMDMARMLFDKCPE----KNLVLWTTIISG-YAEK 292
+ + I+ W +++ G++++A + ++ + KN + ++S YAE+
Sbjct: 681 VKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEE 740
Query: 293 GFMKEATVLYDKMEEAGLKPDDG 315
K + M E GLK + G
Sbjct: 741 QKWKSVDKVRRGMREKGLKKEVG 763
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 187/636 (29%), Positives = 301/636 (47%), Gaps = 90/636 (14%)
Query: 13 FSPRRLLEEK--------LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLC 64
F PR+ E + L L +C +++ ++QI AQ+L + + ++ PK +
Sbjct: 23 FKPRQFEEARRGDLERDFLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVE----L 78
Query: 65 RHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFL 124
+ + +F+ PN + +N +IR + S + M+ G+ PD FTY F+
Sbjct: 79 GDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFV 138
Query: 125 LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER 184
AC + + + +H+ + K G D+ + +SLI Y++CG VG
Sbjct: 139 FIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGY------------- 185
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML 244
A KLFDE+ ERD VSWN+M+ GY++AG A +LF +M
Sbjct: 186 --------------------ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKME 225
Query: 245 Q-------WNIISW--------------------------------STMVCGYSRAGDMD 265
+ ++S S ++ Y + GD+D
Sbjct: 226 EEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLD 285
Query: 266 MARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA 325
AR +F++ +K+ V WT +I+ Y++ G EA L+ +ME+ G+ PD G L ++L+AC
Sbjct: 286 SARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACG 345
Query: 326 ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
G L LGK+I + + V +DMY KCG ++ A +F M K + +WN
Sbjct: 346 SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNE-ATWN 404
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
+MI + G ++AL LF M P TFIG+L AC HAGLV +G YF+ M +
Sbjct: 405 AMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSM 461
Query: 446 YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARA 505
+G+VP+IEHY +IDLLSR G L+EA+E + P +P+ I++ +LGAC DV +
Sbjct: 462 FGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREK 521
Query: 506 LSEHLFKLVPS-DPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXX 564
L ++ + + GN+ + SN+ A W A +R M++ G K G S I
Sbjct: 522 AMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGEL 581
Query: 565 XXFTV-FDHSHPKSDDIYQMIGRLVHDLRQVGYVPG 599
F D+ +D + LV ++++ Y G
Sbjct: 582 MEFLAGSDYLQCGREDSGSLFDLLVEEMKRERYEFG 617
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 291 bits (746), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 310/576 (53%), Gaps = 42/576 (7%)
Query: 3 VSAGVRIPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFS 62
+++GVR + P L K C R +D K IH+ + + D+YV L+ ++
Sbjct: 95 LNSGVRPTKYTYPFVL---KACAGLRA--IDDGKLIHSHVNCSDFATDMYVCTALVDFYA 149
Query: 63 LCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLT--FSTFFHMQR-EGVYPDNF 119
C + A+ VF+++P ++ +N++I +L H LT F M+R +G+ P+
Sbjct: 150 KCGELEMAIKVFDEMPKRDMVAWNAMISGFSL---HCCLTDVIGLFLDMRRIDGLSPNLS 206
Query: 120 TYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSY--SRCGGVGIDGAMRL 177
T + A +L + +H + + GF D+ V ++D Y S+C I A R+
Sbjct: 207 TIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKC----IIYARRV 262
Query: 178 FSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNT------MLDGYAKAG 231
F +++ VTW++MIGG V + A ++F +M D V+ T +L G A+ G
Sbjct: 263 FDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFG 322
Query: 232 EMN----------KAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL 281
+++ KA + D +Q IIS+ Y++ G + A F + K+++
Sbjct: 323 DLSGGRCVHCYAVKAGFILDLTVQNTIISF------YAKYGSLCDAFRQFSEIGLKDVIS 376
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ 341
+ ++I+G +E+ L+ +M +G++PD L+ +LTAC+ LG G H
Sbjct: 377 YNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV 436
Query: 342 RCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKAL 401
+ +T + NA +DMY KCG LD A +F M K+D+VSWN+M+ GFG+HG G++AL
Sbjct: 437 VHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMH-KRDIVSWNTMLFGFGIHGLGKEAL 495
Query: 402 ELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK-VYGIVPQIEHYGCMID 460
LF+SM G PD+ T + +L AC+H+GLVD+G+ FNSM + + ++P+I+HY CM D
Sbjct: 496 SLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTD 555
Query: 461 LLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGN 520
LL+R G+L+EA++ + MP EP+ V+GTLL AC + + EL +S+ + L + +
Sbjct: 556 LLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTE-S 614
Query: 521 FSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
LLSN Y+ A W + A +R+ K G K G S
Sbjct: 615 LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYS 650
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 158/564 (28%), Positives = 266/564 (47%), Gaps = 66/564 (11%)
Query: 25 TLHRCSNLDLVKQIHAQLLKAHLH-QDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVH 83
T R NL L + IH LLK L V L ++ C + A +VF+++P+P ++
Sbjct: 8 TCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRIN 67
Query: 84 --LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
++ +IRA+A N ++ M GV P +TYPF+LKAC G ++ ++IH
Sbjct: 68 PIAWDLMIRAYASN-DFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIH 126
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
+HV F D++V +L+D Y++CG ++ A+++F M +RD V WN+MI G
Sbjct: 127 SHVNCSDFATDMYVCTALVDFYAKCG--ELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 202 LDGAFKLFDEMPERDMVSWNT-----MLDGYAKAGEMNKAFELF---DRM-LQWNIISWS 252
L LF +M D +S N M +AG + + + RM +++ +
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKT 244
Query: 253 TMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP 312
++ Y+++ + AR +FD +KN V W+ +I GY E +KEA ++ +M L
Sbjct: 245 GILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM----LVN 300
Query: 313 DDGVLIS------ILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLD 366
D+ +++ IL CA G L G+ +H + F V N I YAK G L
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 367 AAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCAC 426
AF FS++ G KD++S+NS+I G V+ + E++ LF M G PD T +G+L AC
Sbjct: 361 DAFRQFSEI-GLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 427 THAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLE----------------- 469
+H + G + + V+G ++D+ ++ G L+
Sbjct: 420 SHLAALGHGSS-CHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSW 478
Query: 470 --------------EAFELLRSMP---VEPNAIVVGTLLGACRMHNDV----ELARALSE 508
EA L SM V P+ + + +L AC V +L ++S
Sbjct: 479 NTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSR 538
Query: 509 HLFKLVPSDPGNFSLLSNIYAQAG 532
F ++P +++ ++++ A+AG
Sbjct: 539 GDFNVIPR-IDHYNCMTDLLARAG 561
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 7/185 (3%)
Query: 316 VLISILTACAESGMLGLGKKIHAS-VQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSK 374
+ +S+L C S L LG+ IH ++R S+ VL +YA C ++ A +F +
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 375 MTGKK-DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVD 433
+ + + ++W+ MI + + EKAL+L+ M++ G P KYT+ +L AC +D
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 434 KGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP----VEPNAIVVGT 489
G+ +S + ++D ++ G LE A ++ MP V NA++ G
Sbjct: 121 DGK-LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 490 LLGAC 494
L C
Sbjct: 180 SLHCC 184
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 291 bits (745), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 187/611 (30%), Positives = 291/611 (47%), Gaps = 77/611 (12%)
Query: 58 IAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPD 117
IA+ + I+SA VF+ +P + +N+++ +++ G H + F ++ PD
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQE-AIALFTQLRFSDAKPD 69
Query: 118 NFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV-------- 169
++++ +L C ++ + I + V + GF + V NSLID Y +C
Sbjct: 70 DYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFR 129
Query: 170 -----------------------GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAF 206
+ A+ +F M +R A WN MI G G L+
Sbjct: 130 DMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCL 189
Query: 207 KLFDEMPERD--------------------------MV-------SW-------NTMLDG 226
LF EM E + MV W N++L
Sbjct: 190 SLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSF 249
Query: 227 YAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTII 286
Y K G + A + + +SW++++ + G+ + A +F PEKN+V WTT+I
Sbjct: 250 YTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMI 309
Query: 287 SGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFR 346
+GY G ++A + +M ++G+ D ++L AC+ +LG GK IH + C F+
Sbjct: 310 TGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQ 369
Query: 347 CSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSS 406
V NA +++YAKCG + A F + KDLVSWN+M+ FGVHG ++AL+L+ +
Sbjct: 370 GYAYVGNALVNLYAKCGDIKEADRAFGDI-ANKDLVSWNTMLFAFGVHGLADQALKLYDN 428
Query: 407 MVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGG 466
M+ G +PD TFIGLL C+H+GLV++G F SM K Y I +++H CMID+ RGG
Sbjct: 429 MIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGG 488
Query: 467 HLEEAFELLRS----MPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFS 522
HL EA +L + + N TLLGAC H EL R +S+ L PS+ +F
Sbjct: 489 HLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFV 548
Query: 523 LLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQ 582
LLSN+Y G W VR +M G +K G S I F V D SHP+ +++ +
Sbjct: 549 LLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSE 608
Query: 583 MIGRLVHDLRQ 593
+ L H++R
Sbjct: 609 TLNCLQHEMRN 619
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 175/392 (44%), Gaps = 48/392 (12%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
L+ A+ +A++VF ++P +N +I HA G S S F M P
Sbjct: 144 LLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES-CLSLFKEMLESEFKP 202
Query: 117 DNFTYPFLLKACTGPSS-LPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM 175
D +T+ L+ AC+ SS + +M+HA + K G+ + NS++ Y++ G D AM
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSR--DDAM 260
Query: 176 RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNK 235
R ++E V+WNS+I ++ G+ + A ++F PE+++V+W TM+ GY + G+ +
Sbjct: 261 RELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQ 320
Query: 236 AFELFDRMLQWNI-------------------------ISWSTMVCG------------- 257
A F M++ + I + CG
Sbjct: 321 ALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVN 380
Query: 258 -YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
Y++ GD+ A F K+LV W T++ + G +A LYD M +G+KPD+
Sbjct: 381 LYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVT 440
Query: 317 LISILTACAESGMLGLGKKIHAS-VQRCRFRCSTKVLNAFIDMYAKCGCL----DAAFGI 371
I +LT C+ SG++ G I S V+ R + IDM+ + G L D A
Sbjct: 441 FIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTY 500
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALEL 403
S +T + SW +++ H E E+
Sbjct: 501 SSLVTDSSNNSSWETLLGACSTHWHTELGREV 532
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 150/336 (44%), Gaps = 42/336 (12%)
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
++ ++ + +++G + AR +FD PE + V W T+++ Y+ G +EA L+ ++
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG---- 363
+ KPDD +IL+ CA G + G+KI + V R F S V N+ IDMY KC
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLS 123
Query: 364 --------CLD---------------------AAFGIFSKMTGKKDLVSWNSMIHGFGVH 394
C D AA +F +M K+ +WN MI G
Sbjct: 124 ANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMP-KRVAFAWNIMISGHAHC 182
Query: 395 GQGEKALELFSSMVHEGFEPDKYTFIGLLCACT-HAGLVDKGRNYFNSMEKVYGIVPQIE 453
G+ E L LF M+ F+PD YTF L+ AC+ + V GR M K G +E
Sbjct: 183 GKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLK-NGWSSAVE 241
Query: 454 HYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKL 513
++ ++ G ++A L S+ V + +++ AC + E +AL +F L
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEV-LTQVSWNSIIDACMKIGETE--KAL--EVFHL 296
Query: 514 VPS-DPGNFSLLSNIYAQAGDWMNVASVRLQMKNAG 548
P + ++ + Y + GD ++M +G
Sbjct: 297 APEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSG 332
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 288/571 (50%), Gaps = 71/571 (12%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVN----VFNQVPYPNVH 83
+CS + +KQIHA L+K L D A +++A C S +N VF ++ + N
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLA---FCCASPSDMNYAYLVFTRINHKNPF 90
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
++N++IR + + +P+ F+ C+ PS P
Sbjct: 91 VWNTIIRGFSRSS------------------FPEMAISIFIDMLCSSPSVKP-------- 124
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
+ + P S+ +Y R G + RD + M+
Sbjct: 125 -------QRLTYP-SVFKAYGRLG--------------QARDGRQLHGMV---------- 152
Query: 204 GAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGD 263
E E D NTML Y G + +A+ +F M+ +++++W++M+ G+++ G
Sbjct: 153 -----IKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGL 207
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+D A+ LFD+ P++N V W ++ISG+ G K+A ++ +M+E +KPD ++S+L A
Sbjct: 208 IDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
CA G G+ IH + R RF ++ V+ A IDMY KCGC++ +F + KK L
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVF-ECAPKKQLSC 326
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
WNSMI G +G E+A++LFS + G EPD +FIG+L AC H+G V + +F M+
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
+ Y I P I+HY M+++L G LEEA L+++MPVE + ++ +LL ACR +VE+A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 504 RALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXX 563
+ ++ L KL P + + LLSN YA G + RL MK +K G SSI
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Query: 564 XXXFTVFDHSHPKSDDIYQMIGRLVHDLRQV 594
F +HPKS +IY ++ L D+ +
Sbjct: 507 VHEFISCGGTHPKSAEIYSLLDILNWDVSTI 537
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 94/225 (41%), Gaps = 19/225 (8%)
Query: 26 LHRCSNLDLVKQ---IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L+ C+ L +Q IH +++ + V LI + C I +NVF P +
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
+NS+I A NG F ++R G+ PD+ ++ +L AC +H
Sbjct: 325 SCWNSMILGLANNGFEER-AMDLFSELERSGLEPDSVSFIGVLTACAHSGE------VHR 377
Query: 143 HVEKFGFYEDIFVPNSLIDSYSR----CGGVG-IDGAMRLFSAME-ERDAVTWNSMIGGL 196
E F ++ ++ I Y+ GG G ++ A L M E D V W+S++
Sbjct: 378 ADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSAC 437
Query: 197 VRGGDLD---GAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFE 238
+ G+++ A K ++ + + + + YA G +A E
Sbjct: 438 RKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 290/574 (50%), Gaps = 16/574 (2%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+Q HA ++K D+YV L+ + + + VF +P N + +++++ +A
Sbjct: 138 RQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATR 197
Query: 96 G--SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
G F+ F + EG D + + +L + + L + IH K G +
Sbjct: 198 GRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
+ N+L+ YS+C ++ A ++F + +R+++TW++M+ G + G+ A KLF M
Sbjct: 257 ALSNALVTMYSKCES--LNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMF 314
Query: 214 ERDMVSWNTMLDG---------YAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDM 264
+ + G Y + G+ +F L + ++ + + +V Y++AG +
Sbjct: 315 SAGIKPSEYTIVGVLNACSDICYLEEGKQLHSF-LLKLGFERHLFATTALVDMYAKAGCL 373
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
AR FD E+++ LWT++ISGY + +EA +LY +M+ AG+ P+D + S+L AC
Sbjct: 374 ADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKAC 433
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
+ L LGK++H + F + +A MY+KCG L+ +F + T KD+VSW
Sbjct: 434 SSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR-TPNKDVVSW 492
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
N+MI G +GQG++ALELF M+ EG EPD TF+ ++ AC+H G V++G YFN M
Sbjct: 493 NAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSD 552
Query: 445 VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELAR 504
G+ P+++HY CM+DLLSR G L+EA E + S ++ + LL AC+ H EL
Sbjct: 553 QIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGV 612
Query: 505 ALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXX 564
E L L + + LS IY G +V V M+ G K G S I
Sbjct: 613 YAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQY 672
Query: 565 XXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F V D HP ++ ++ + + + G+V
Sbjct: 673 HVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVT 706
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/530 (25%), Positives = 248/530 (46%), Gaps = 52/530 (9%)
Query: 19 LEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP 78
L +KL + NL + +H Q+++ + A L+ ++ C ++ A ++FN +
Sbjct: 17 LLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAII 76
Query: 79 YPNVHLYNSLIRAHALNG--SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPL 136
+V +NSLI ++ NG S F M+ + + P+ +T + KA + S +
Sbjct: 77 CKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTV 136
Query: 137 VQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGL 196
+ HA V K + DI+V SL+ Y + G V + +++F+ M ER+ TW++M+ G
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLV--EDGLKVFAYMPERNTYTWSTMVSGY 194
Query: 197 VRGGDLDGAFKLF-------DEMPERDMVSWNTMLDG-----YAKAGEMNKAFELFDRML 244
G ++ A K+F +E + D V + +L Y G + + +L
Sbjct: 195 ATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLL 253
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
+ +S + +V YS+ ++ A +FD ++N + W+ +++GY++ G EA L+ +
Sbjct: 254 GFVALS-NALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
M AG+KP + ++ +L AC++ L GK++H+ + + F A +DMYAK GC
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
L A F + ++D+ W S+I G+ + E+AL L+ M G P+ T +L
Sbjct: 373 LADARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLK 431
Query: 425 ACTHAGLVDKGRN-YFNSMEKVYGI-VP----------------------------QIEH 454
AC+ ++ G+ + ++++ +G+ VP +
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 455 YGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIVVGTLLGACRMHNDVE 501
+ MI LS G +EA EL M +EP+ + ++ AC VE
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVE 541
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
L P L+ LT ++ L G+ +H + R + N ++ YAKCG L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 370 GIFSKMTGKKDLVSWNSMIHGFGVHG---QGEKALELFSSMVHEGFEPDKYTFIGLLCAC 426
IF+ + KD+VSWNS+I G+ +G ++LF M + P+ YT G+ A
Sbjct: 70 SIFNAIIC-KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 427 THAGLVDKGRNYFNSMEKVYGIVPQIEHYG------CMIDLLSRGGHLEEAFELLRSMPV 480
+ GR + + +V ++ +G ++ + + G +E+ ++ MP
Sbjct: 129 SSLQSSTVGR-------QAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP- 180
Query: 481 EPNAIVVGTLLGACRMHNDVELA 503
E N T++ VE A
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEA 203
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/535 (31%), Positives = 276/535 (51%), Gaps = 23/535 (4%)
Query: 86 NSLIRAHAL----NGSHPSLTFSTFFHMQREGVYPDNFTYPF--------LLKACTGPSS 133
N LIR L N S S S +E V P ++ F +L+ C +
Sbjct: 17 NFLIRCKVLPRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGA 76
Query: 134 LPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMI 193
+ + H + + D+ + N LI++YS+CG V + A ++F M ER V+WN+MI
Sbjct: 77 VMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVEL--ARQVFDGMLERSLVSWNTMI 134
Query: 194 GGLVRGGDLDGAFKLFDEMPERDM-VSWNTMLDGYAKAGEMNKAFEL-------FDRMLQ 245
G R A +F EM S T+ + G A E +
Sbjct: 135 GLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCID 194
Query: 246 WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM 305
N+ + ++ Y++ G + A +F+ +K+ V W+++++GY + +EA +LY +
Sbjct: 195 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 254
Query: 306 EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCL 365
+ L+ + L S++ AC+ L GK++HA + + F + V ++ +DMYAKCG L
Sbjct: 255 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 314
Query: 366 DAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA 425
++ IFS++ +K+L WN++I GF H + ++ + LF M +G P++ TF LL
Sbjct: 315 RESYIIFSEVQ-EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 373
Query: 426 CTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAI 485
C H GLV++GR +F M YG+ P + HY CM+D+L R G L EA+EL++S+P +P A
Sbjct: 374 CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTAS 433
Query: 486 VVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMK 545
+ G+LL +CR++ ++ELA +E LF+L P + GN LLSNIYA W +A R ++
Sbjct: 434 IWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLR 493
Query: 546 NAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGI 600
+ +K G S I F+V + HP+ +I + LV R+ GY P +
Sbjct: 494 DCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSV 548
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 202/422 (47%), Gaps = 19/422 (4%)
Query: 2 QVSAGVRIPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAF 61
+VS G R FS R L+ E L R + K H ++++ L D+ + LI A+
Sbjct: 48 EVSPG-RYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAY 106
Query: 62 SLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTY 121
S C + A VF+ + ++ +N++I + N S F M+ EG FT
Sbjct: 107 SKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN-RMESEALDIFLEMRNEGFKFSEFTI 165
Query: 122 PFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAM 181
+L AC + +H K +++V +L+D Y++CG I A+++F +M
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCG--MIKDAVQVFESM 223
Query: 182 EERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAF 237
+++ +VTW+SM+ G V+ + + A L+ E++ + ++++ + + +
Sbjct: 224 QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGK 283
Query: 238 ELFDRMLQ----WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKG 293
++ + + N+ S+ V Y++ G + + ++F + EKNL LW TIISG+A+
Sbjct: 284 QMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHA 343
Query: 294 FMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL- 352
KE +L++KM++ G+ P++ S+L+ C +G++ G++ + R + S V+
Sbjct: 344 RPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFF-KLMRTTYGLSPNVVH 402
Query: 353 -NAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
+ +D+ + G L A+ + + W S++ V+ K LEL +
Sbjct: 403 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVY----KNLELAEVAAEKL 458
Query: 412 FE 413
FE
Sbjct: 459 FE 460
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/504 (32%), Positives = 263/504 (52%), Gaps = 41/504 (8%)
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE 183
+L++C + +P IHA + + +D FV LI S V D A +FS +
Sbjct: 35 VLRSCKNIAHVP---SIHAKIIRTFHDQDAFVVFELIRVCSTLDSV--DYAYDVFSYVSN 89
Query: 184 RDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWN---------------------- 221
+ + +MI G V G L+ M ++ N
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQV 149
Query: 222 -------------TMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMAR 268
M++ Y K+GE+ A ++FD M + ++ + M+ YS G + A
Sbjct: 150 LKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEAL 209
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG 328
LF K+ V WT +I G M +A L+ +M+ + ++ + +L+AC++ G
Sbjct: 210 ELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLG 269
Query: 329 MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
L LG+ +H+ V+ R S V NA I+MY++CG ++ A +F M KD++S+N+MI
Sbjct: 270 ALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMR-DKDVISYNTMI 328
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGI 448
G +HG +A+ F MV+ GF P++ T + LL AC+H GL+D G FNSM++V+ +
Sbjct: 329 SGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNV 388
Query: 449 VPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSE 508
PQIEHYGC++DLL R G LEEA+ + ++P+EP+ I++GTLL AC++H ++EL +++
Sbjct: 389 EPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAK 448
Query: 509 HLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFT 568
LF+ D G + LLSN+YA +G W +R M+++G +K G S+I F
Sbjct: 449 RLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFL 508
Query: 569 VFDHSHPKSDDIYQMIGRLVHDLR 592
V D +HP + IYQ + L LR
Sbjct: 509 VGDIAHPHKEAIYQRLQELNRILR 532
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 202/451 (44%), Gaps = 53/451 (11%)
Query: 13 FSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVN 72
S R+ L + L C N+ V IHA++++ QD +V +LI S + A +
Sbjct: 26 LSRRKTL---ISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYD 82
Query: 73 VFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS 132
VF+ V PNV+LY ++I +G S + M V PDN+ +LKAC
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSAD-GVSLYHRMIHNSVLPDNYVITSVLKAC---- 137
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
L + + IHA V K GF V +++ Y + G + A ++F M +RD V M
Sbjct: 138 DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSG--ELVNAKKMFDEMPDRDHVAATVM 195
Query: 193 IGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-- 250
I G + A +LF ++ +D V W M+DG + EMNKA ELF M N+ +
Sbjct: 196 INCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANE 255
Query: 251 --------------------W-----------------STMVCGYSRAGDMDMARMLFDK 273
W + ++ YSR GD++ AR +F
Sbjct: 256 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
+K+++ + T+ISG A G EA + M G +P+ L+++L AC+ G+L +G
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375
Query: 334 KKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGF 391
++ S++R F ++ +D+ + G L+ A+ + + D + +++
Sbjct: 376 LEVFNSMKRV-FNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSAC 434
Query: 392 GVHGQGEKALELFSSMVHEGFEPDKYTFIGL 422
+HG E E + + E PD T++ L
Sbjct: 435 KIHGNMELG-EKIAKRLFESENPDSGTYVLL 464
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 184/572 (32%), Positives = 292/572 (51%), Gaps = 51/572 (8%)
Query: 26 LHRCSNLDLVKQIHAQLL---KAHL-----HQDLYVAPKLIAAFSLCRHISSAVNVFNQV 77
L RC L+ KQ+HAQL+ HL HQ L+ + + ++ ++ + FN
Sbjct: 10 LQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEF--SRNIVTYVKRILKGFNG- 66
Query: 78 PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
+ + L+R + + T + M G+ P + +L+AC ++
Sbjct: 67 --HDSFSWGCLVRFLSQHRKFKE-TVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDG 123
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLV 197
+ IHA K G ++V L+ YSR G + + A + F + E++ V+WNS++ G +
Sbjct: 124 KPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIEL--AKKAFDDIAEKNTVSWNSLLHGYL 181
Query: 198 RGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG 257
G+LD A ++FD++PE+D VSWN ++ YAK G+M A LF M + SW+ ++ G
Sbjct: 182 ESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGG 241
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEA-----------TVLYDKM- 305
Y +M +AR FD P+KN V W T+ISGY + G ++ A ++YD M
Sbjct: 242 YVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMI 301
Query: 306 ---------------------EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCR 344
+ ++PD+ L S+++A ++ G G + + +
Sbjct: 302 ACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHG 361
Query: 345 FRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELF 404
+ + + ID+Y K G AF +FS + KKD VS+++MI G G++G +A LF
Sbjct: 362 IKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLF 420
Query: 405 SSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSR 464
++M+ + P+ TF GLL A +H+GLV +G FNSM K + + P +HYG M+D+L R
Sbjct: 421 TAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGR 479
Query: 465 GGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLL 524
G LEEA+EL++SMP++PNA V G LL A +HN+VE H KL G S L
Sbjct: 480 AGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHL 539
Query: 525 SNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
+ IY+ G W + +VR +K K G S
Sbjct: 540 AMIYSSVGRWDDARTVRDSIKEKKLCKTLGCS 571
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 168/497 (33%), Positives = 260/497 (52%), Gaps = 17/497 (3%)
Query: 116 PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM 175
P TY L+ C SSL +H H+ G +D F+ LI YS G V D A
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSV--DYAR 132
Query: 176 RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKA- 230
++F +R WN++ L G + L+ +M E D ++ +L +
Sbjct: 133 KVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASE 192
Query: 231 ---GEMNKAFE----LFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWT 283
+ K E L R ++ +T+V Y+R G +D A +F P +N+V W+
Sbjct: 193 CTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWS 252
Query: 284 TIISGYAEKGFMKEATVLYDKM--EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ 341
+I+ YA+ G EA + +M E P+ ++S+L ACA L GK IH +
Sbjct: 253 AMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYIL 312
Query: 342 RCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKAL 401
R V++A + MY +CG L+ +F +M +D+VSWNS+I +GVHG G+KA+
Sbjct: 313 RRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH-DRDVVSWNSLISSYGVHGYGKKAI 371
Query: 402 ELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDL 461
++F M+ G P TF+ +L AC+H GLV++G+ F +M + +GI PQIEHY CM+DL
Sbjct: 372 QIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDL 431
Query: 462 LSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNF 521
L R L+EA ++++ M EP V G+LLG+CR+H +VELA S LF L P + GN+
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNY 491
Query: 522 SLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIY 581
LL++IYA+A W V V+ +++ G QK G + F D +P + I+
Sbjct: 492 VLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIH 551
Query: 582 QMIGRLVHDLRQVGYVP 598
+ +L D+++ GY+P
Sbjct: 552 AFLVKLAEDMKEKGYIP 568
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 190/393 (48%), Gaps = 19/393 (4%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
LC HR S D ++ +H +L QD ++A KLI +S + A VF++ +
Sbjct: 85 LCCGHRSSLSDALR-VHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTI 143
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGP----SSLPLVQ 138
+++N+L RA L G H ++ M R GV D FTY ++LKAC + L +
Sbjct: 144 YVWNALFRALTLAG-HGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGK 202
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVR 198
IHAH+ + G+ +++ +L+D Y+R G V D A +F M R+ V+W++MI +
Sbjct: 203 EIHAHLTRRGYSSHVYIMTTLVDMYARFGCV--DYASYVFGGMPVRNVVSWSAMIACYAK 260
Query: 199 GGDLDGAFKLFDEMPER------DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-- 250
G A + F EM + V+ ++L A + + + +L+ + S
Sbjct: 261 NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSIL 320
Query: 251 --WSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEA 308
S +V Y R G +++ + +FD+ ++++V W ++IS Y G+ K+A ++++M
Sbjct: 321 PVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCR-FRCSTKVLNAFIDMYAKCGCLDA 367
G P +S+L AC+ G++ GK++ ++ R + + +D+ + LD
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 368 AFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
A + M + W S++ +HG E A
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 143/344 (41%), Positives = 213/344 (61%), Gaps = 2/344 (0%)
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
Y+ GD+ A +FDK PEK+LV W ++I+G+AE G +EA LY +M G+KPD +
Sbjct: 33 YANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 92
Query: 318 ISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG 377
+S+L+ACA+ G L LGK++H + + + N +D+YA+CG ++ A +F +M
Sbjct: 93 VSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVD 152
Query: 378 KKDLVSWNSMIHGFGVHGQGEKALELFSSMVH-EGFEPDKYTFIGLLCACTHAGLVDKGR 436
K VSW S+I G V+G G++A+ELF M EG P + TF+G+L AC+H G+V +G
Sbjct: 153 KNS-VSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGF 211
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRM 496
YF M + Y I P+IEH+GCM+DLL+R G +++A+E ++SMP++PN ++ TLLGAC +
Sbjct: 212 EYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTV 271
Query: 497 HNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
H D +LA + +L P+ G++ LLSN+YA W +V +R QM G +K G S
Sbjct: 272 HGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHS 331
Query: 557 SIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGI 600
+ F + D SHP+SD IY + + LR GYVP I
Sbjct: 332 LVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 375
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 137/268 (51%), Gaps = 14/268 (5%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
+++ L + IH+ ++++ +YV L+ ++ C ++SA VF+++P ++ +NS+I
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 90 RAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF 149
A NG P + + M +G+ PD FT LL AC +L L + +H ++ K G
Sbjct: 62 NGFAENGK-PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 150 YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
++ N L+D Y+RCG V + A LF M ++++V+W S+I GL G A +LF
Sbjct: 121 TRNLHSSNVLLDLYARCGRV--EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 210 DEMPERD-----MVSWNTMLDGYAKAGEMNKAFELFDRM-----LQWNIISWSTMVCGYS 259
M + +++ +L + G + + FE F RM ++ I + MV +
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 238
Query: 260 RAGDMDMARMLFDKCP-EKNLVLWTTII 286
RAG + A P + N+V+W T++
Sbjct: 239 RAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 139/311 (44%), Gaps = 76/311 (24%)
Query: 132 SSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNS 191
+ + L + IH+ V + GF I+V NSL+ Y+ CG
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCG------------------------ 37
Query: 192 MIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM-------- 243
D+ A+K+FD+MPE+D+V+WN++++G+A+ G+ +A L+ M
Sbjct: 38 ---------DVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPD 88
Query: 244 -------------------------------LQWNIISWSTMVCGYSRAGDMDMARMLFD 272
L N+ S + ++ Y+R G ++ A+ LFD
Sbjct: 89 GFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFD 148
Query: 273 KCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEA-GLKPDDGVLISILTACAESGMLG 331
+ +KN V WT++I G A GF KEA L+ ME GL P + + IL AC+ GM+
Sbjct: 149 EMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVK 208
Query: 332 LGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIH 389
G + + R ++ ++ +D+ A+ G + A+ M + ++V W +++
Sbjct: 209 EGFEYFRRM-REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLG 267
Query: 390 GFGVHGQGEKA 400
VHG + A
Sbjct: 268 ACTVHGDSDLA 278
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 94/160 (58%), Gaps = 3/160 (1%)
Query: 332 LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGF 391
LG+ IH+ V R F V N+ + +YA CG + +A+ +F KM +KDLV+WNS+I+GF
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP-EKDLVAWNSVINGF 64
Query: 392 GVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQ 451
+G+ E+AL L++ M +G +PD +T + LL AC G + G+ M KV G+
Sbjct: 65 AENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRN 123
Query: 452 IEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLL 491
+ ++DL +R G +EEA L M V+ N++ +L+
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 162
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/490 (32%), Positives = 262/490 (53%), Gaps = 13/490 (2%)
Query: 121 YPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSA 180
Y LL AC +L Q +HAH+ K + ++ L+ Y +C ++ A ++
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC--LEDARKVLDE 112
Query: 181 MEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERD----MVSWNTMLDGYAKAGEMNKA 236
M E++ V+W +MI + G A +F EM D ++ T+L +A +
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 237 FELFDRMLQWN----IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEK 292
++ +++WN I S+++ Y++AG + AR +F+ PE+++V T II+GYA+
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 293 GFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL 352
G +EA ++ ++ G+ P+ S+LTA + +L GK+ H V R +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG- 411
N+ IDMY+KCG L A +F M ++ +SWN+M+ G+ HG G + LELF M E
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSM-EKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
+PD T + +L C+H + D G N F+ M YG P EHYGC++D+L R G ++E
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQ 530
AFE ++ MP +P A V+G+LLGACR+H V++ ++ L ++ P + GN+ +LSN+YA
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYAS 471
Query: 531 AGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHD 590
AG W +V +VR M K G S I F D +HP+ +++ + +
Sbjct: 472 AGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIK 531
Query: 591 LRQVGYVPGI 600
++Q GYVP +
Sbjct: 532 MKQAGYVPDL 541
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 174/370 (47%), Gaps = 14/370 (3%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+++HA ++K Y+ +L+ + C + A V +++P NV + ++I ++
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQT 131
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
G H S + F M R P+ FT+ +L +C S L L + IH + K+ + IFV
Sbjct: 132 G-HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
+SL+D Y++ G I A +F + ERD V+ ++I G + G + A ++F +
Sbjct: 191 GSSLLDMYAKAG--QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 216 DM-------VSWNTMLDGYAKAGEMNKAF-ELFDRMLQWNIISWSTMVCGYSRAGDMDMA 267
M S T L G A +A + R L + + ++++ YS+ G++ A
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 268 RMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM-EEAGLKPDDGVLISILTACAE 326
R LFD PE+ + W ++ GY++ G +E L+ M +E +KPD L+++L+ C+
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 327 SGMLGLGKKIHASVQRCRF--RCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
M G I + + + T+ +DM + G +D AF +M K
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVL 428
Query: 385 NSMIHGFGVH 394
S++ VH
Sbjct: 429 GSLLGACRVH 438
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 287 bits (734), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/580 (32%), Positives = 294/580 (50%), Gaps = 25/580 (4%)
Query: 38 IHAQLLK---------AHLHQD-LYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
+HA ++K A +H++ L V L++ ++ C + A+ +F+++P +V N
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNI 126
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
+ N S F M G + D+ T +L C P + +MIHA
Sbjct: 127 VFYGFLRNRETES-GFVLLKRMLGSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILS 184
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
G+ ++I V N LI SY +CG + G +F M R+ +T ++I GL+ + +
Sbjct: 185 GYDKEISVGNKLITSYFKCG-CSVSGR-GVFDGMSHRNVITLTAVISGLIENELHEDGLR 242
Query: 208 LFDEMPERDMVSWN--TMLDGYAKAGEMNKAFE-------LFDRMLQWNIISWSTMVCGY 258
LF M R +V N T L A + E L+ ++ + S ++ Y
Sbjct: 243 LFSLM-RRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMY 301
Query: 259 SRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLI 318
S+ G ++ A +F+ E + V T I+ G A+ G +EA + +M +AG++ D V+
Sbjct: 302 SKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVS 361
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
++L LGLGK++H+ V + +F +T V N I+MY+KCG L + +F +M K
Sbjct: 362 AVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-K 420
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY 438
++ VSWNSMI F HG G AL+L+ M +P TF+ LL AC+H GL+DKGR
Sbjct: 421 RNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGREL 480
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
N M++V+GI P+ EHY C+ID+L R G L+EA + S+P++P+ + LLGAC H
Sbjct: 481 LNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Query: 499 DVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
D E+ +E LF+ P L++NIY+ G W A +MK G K +G SSI
Sbjct: 541 DTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSI 600
Query: 559 XXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F V D HP+++ IY ++ L + GY P
Sbjct: 601 EIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRP 640
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 173/375 (46%), Gaps = 14/375 (3%)
Query: 34 LVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHA 93
+ K IHA + + +++ V KLI ++ C S VF+ + + NV ++I
Sbjct: 173 VTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLI 232
Query: 94 LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
N H F M+R V+P++ TY L AC+G + Q IHA + K+G ++
Sbjct: 233 ENELHED-GLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESEL 291
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
+ ++L+D YS+CG I+ A +F + E D V+ ++ GL + G + A + F M
Sbjct: 292 CIESALMDMYSKCG--SIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 214 ERDM---------VSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDM 264
+ + V + +D G+ + + R N + ++ YS+ GD+
Sbjct: 350 QAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSL-VIKRKFSGNTFVNNGLINMYSKCGDL 408
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
++ +F + P++N V W ++I+ +A G A LY++M +KP D +S+L AC
Sbjct: 409 TDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHAC 468
Query: 325 AESGMLGLGKKIHASVQRCR-FRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
+ G++ G+++ ++ T+ IDM + G L A + K D
Sbjct: 469 SHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKI 528
Query: 384 WNSMIHGFGVHGQGE 398
W +++ HG E
Sbjct: 529 WQALLGACSFHGDTE 543
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 266/528 (50%), Gaps = 76/528 (14%)
Query: 112 EGVY--PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV 169
EG Y D Y LLK CT L +++HAH+ + F DI + N+L++ Y++CG
Sbjct: 52 EGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS- 110
Query: 170 GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAK 229
L+ A K+F++MP+RD V+W T++ GY++
Sbjct: 111 --------------------------------LEEARKVFEKMPQRDFVTWTTLISGYSQ 138
Query: 230 AGEMNKAFELFDRMLQW----NIISWSTMV---------------------CG------- 257
A F++ML++ N + S+++ CG
Sbjct: 139 HDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHV 198
Query: 258 -------YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
Y+R G MD A+++FD +N V W +I+G+A + ++A L+ M G
Sbjct: 199 GSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGF 258
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
+P S+ AC+ +G L GK +HA + + + N +DMYAK G + A
Sbjct: 259 RPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 371 IFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG 430
IF ++ K+D+VSWNS++ + HG G++A+ F M G P++ +F+ +L AC+H+G
Sbjct: 319 IFDRL-AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSG 377
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTL 490
L+D+G +Y+ M+K GIVP+ HY ++DLL R G L A + MP+EP A + L
Sbjct: 378 LLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL 436
Query: 491 LGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQ 550
L ACRMH + EL +EH+F+L P DPG +L NIYA G W + A VR +MK +G +
Sbjct: 437 LNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVK 496
Query: 551 KPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
K S + F D HP+ ++I + ++ ++++GYVP
Sbjct: 497 KEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVP 544
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 179/415 (43%), Gaps = 76/415 (18%)
Query: 26 LHRCSNLDLVKQ---IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L +C+ L+ Q +HA +L++ D+ + L+ ++ C + A VF ++P +
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
+ +LI ++ + P F M R G P+ FT ++KA +H
Sbjct: 127 VTWTTLISGYSQH-DRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHG 185
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
K GF ++ V ++L+D Y+R G +D A +F A+E R+ V+WN++I G R
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYG--LMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 203 DGAFKLFDEM------PER----------------DMVSW-----------------NTM 223
+ A +LF M P + W NT+
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 224 LDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWT 283
LD YAK+G ++ A ++FDR+ + +++SW+++
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSL----------------------------- 334
Query: 284 TIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRC 343
++ YA+ GF KEA +++M G++P++ +S+LTAC+ SG+L G + +++
Sbjct: 335 --LTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 392
Query: 344 RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+D+ + G L+ A +M + W ++++ +H E
Sbjct: 393 GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 259/554 (46%), Gaps = 80/554 (14%)
Query: 112 EGVYPDNFTYPF-----LLKACTGPSSLPLVQMIHAHVEKFGFYE-DIFVPNSLIDSYSR 165
E + PF LL+ C SL + IH H++ GF + + N LI Y +
Sbjct: 35 ESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMK 94
Query: 166 CGGVGIDG------------------------------AMRLFSAMEERDAVTWNSMIGG 195
CG ID A +F +M ERD V+WN+M+ G
Sbjct: 95 CGK-PIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIG 153
Query: 196 LVRGGDLDGAFKLFDEMPERDMVSWN---------------------------------- 221
+ G+L A + E R + +N
Sbjct: 154 YAQDGNLHEALWFYKEF-RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLS 212
Query: 222 ------TMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCP 275
+++D YAK G+M A FD M +I W+T++ GY++ GDM+ A LF + P
Sbjct: 213 NVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP 272
Query: 276 EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKK 335
EKN V WT +I+GY +G A L+ KM G+KP+ S L A A L GK+
Sbjct: 273 EKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKE 332
Query: 336 IHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHG 395
IH + R R + V+++ IDMY+K G L+A+ +F K D V WN+MI HG
Sbjct: 333 IHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHG 392
Query: 396 QGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHY 455
G KAL + M+ +P++ T + +L AC+H+GLV++G +F SM +GIVP EHY
Sbjct: 393 LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY 452
Query: 456 GCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVP 515
C+IDLL R G +E + MP EP+ + +LG CR+H + EL + ++ L KL P
Sbjct: 453 ACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDP 512
Query: 516 SDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFD--HS 573
+ LLS+IYA G W V +R MK K S I FTV D H+
Sbjct: 513 ESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHA 572
Query: 574 HPKSDDIYQMIGRL 587
H + ++IY ++ L
Sbjct: 573 HARKEEIYFILHNL 586
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 187/399 (46%), Gaps = 60/399 (15%)
Query: 49 QDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGS-HPSLTFSTFF 107
++LY +++ + + A VF+ +P +V +N+++ +A +G+ H +L F F
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 108 HMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCG 167
+R G+ + F++ LL AC L L + H V GF ++ + S+ID+Y++CG
Sbjct: 171 --RRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCG 228
Query: 168 GVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGY 227
++ A R F M +D W ++I G + GD++ A KLF EMPE++ VSW ++ GY
Sbjct: 229 Q--MESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGY 286
Query: 228 AKAGEMNKAFELFDRML---------------------------------------QWNI 248
+ G N+A +LF +M+ + N
Sbjct: 287 VRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNA 346
Query: 249 ISWSTMVCGYSRAGDMDMARMLFDKCPEK-NLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
I S+++ YS++G ++ + +F C +K + V W T+IS A+ G +A + D M +
Sbjct: 347 IVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIK 406
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASV--------QRCRFRCSTKVLNAFIDMY 359
++P+ L+ IL AC+ SG++ G + S+ + + C ID+
Sbjct: 407 FRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYAC-------LIDLL 459
Query: 360 AKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+ GC +M + D WN+++ +HG E
Sbjct: 460 GRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEE 498
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 284 TIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRC 343
+ +S +A K + +A + + + G++ +L S+L C ++ L GK IH ++
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 344 RF-RCSTKVLNAFIDMYAKCGCLDAAFGIFSKM--------------------------- 375
F R +T + N I MY KCG A +F +M
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 376 ---TGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
++D+VSWN+M+ G+ G +AL + G + ++++F GLL AC + +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 433 DKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLG 492
R + V G + + +ID ++ G +E A M V+ I + G
Sbjct: 196 QLNRQAHGQV-LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 493 ACRMHNDVELARALSEHLFKLVP-SDPGNFSLLSNIYAQAG 532
++ D+E A E LF +P +P +++ L Y + G
Sbjct: 255 YAKL-GDMEAA----EKLFCEMPEKNPVSWTALIAGYVRQG 290
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/516 (33%), Positives = 277/516 (53%), Gaps = 22/516 (4%)
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
N + + ++G++ + +M G+ DN ++AC+ L + H
Sbjct: 15 NWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQP 74
Query: 146 KFGFYEDIFVPNSLIDSYS-----RCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVR-- 198
+ ++ N++I + S + I +L++ + D T+ ++ VR
Sbjct: 75 ----CPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVS 130
Query: 199 ----GGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTM 254
G + G +F +V+ ++ Y G + A ++FD ML ++ W+ +
Sbjct: 131 DVWFGRQIHGQVVVFGFDSSVHVVT--GLIQMYFSCGGLGDARKMFDEMLVKDVNVWNAL 188
Query: 255 VCGYSRAGDMDMARMLFDKCP--EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP 312
+ GY + G+MD AR L + P +N V WT +ISGYA+ G EA ++ +M ++P
Sbjct: 189 LAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEP 248
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
D+ L+++L+ACA+ G L LG++I + V + + NA IDMYAK G + A +F
Sbjct: 249 DEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVF 308
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
+ ++++V+W ++I G HG G +AL +F+ MV G P+ TFI +L AC+H G V
Sbjct: 309 -ECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWV 367
Query: 433 DKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLG 492
D G+ FNSM YGI P IEHYGCMIDLL R G L EA E+++SMP + NA + G+LL
Sbjct: 368 DLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
Query: 493 ACRMHNDVELA-RALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQK 551
A +H+D+EL RALSE L KL P++ GN+ LL+N+Y+ G W +R MK G +K
Sbjct: 428 ASNVHHDLELGERALSE-LIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKK 486
Query: 552 PSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRL 587
+G SSI F D +HP+ + I++++ +
Sbjct: 487 MAGESSIEVENRVYKFISGDLTHPQVERIHEILQEM 522
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 220/462 (47%), Gaps = 51/462 (11%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
+NL +KQ H ++ L++D K I A S H+ A +VF P PN +L+N++I
Sbjct: 26 NNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMI 85
Query: 90 RAHAL--NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
RA +L + S+ + + + PD FT+PF+LK S + + IH V F
Sbjct: 86 RALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVF 145
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
GF + V LI Y CGG+G A ++F M +D WN+++ G + G++D A
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGGLG--DARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARS 203
Query: 208 LFDEMP--ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----------------- 248
L + MP R+ VSW ++ GYAK+G ++A E+F RML N+
Sbjct: 204 LLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADL 263
Query: 249 --ISWSTMVCG--------------------YSRAGDMDMARMLFDKCPEKNLVLWTTII 286
+ +C Y+++G++ A +F+ E+N+V WTTII
Sbjct: 264 GSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTII 323
Query: 287 SGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFR 346
+G A G EA ++++M +AG++P+D I+IL+AC+ G + LGK++ S+ R ++
Sbjct: 324 AGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSM-RSKYG 382
Query: 347 CSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELF 404
+ ID+ + G L A + M K + W S++ VH E
Sbjct: 383 IHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERAL 442
Query: 405 SSMVHEGFEPDKY-TFIGLLCACTHAGLVDKGRNYFNSMEKV 445
S ++ EP+ ++ L ++ G D+ R N M+ +
Sbjct: 443 SELIK--LEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGI 482
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 182/642 (28%), Positives = 307/642 (47%), Gaps = 111/642 (17%)
Query: 25 TLHRCSNLDLV---KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
L C++L+ + K + A+++K +D++V ++ ++ C H++ A+ VF+++P P+
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
V + ++ + + S F M+ GV +N T ++ AC PS + +H
Sbjct: 316 VVSWTVMLSGYTKSNDAFS-ALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVH 374
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGID----------------------------- 172
A V K GFY D V +LI YS+ G + +
Sbjct: 375 AWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKP 434
Query: 173 -GAMRLFSAMEER------------------------------------DAVTWNSMIGG 195
A+RLF+ M + D +S+
Sbjct: 435 GKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTL 494
Query: 196 LVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ------WNII 249
+ G L+ ++KLF +P +D W +M+ G+ + G + +A LF ML + +
Sbjct: 495 YSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTL 554
Query: 250 SWSTMVCG---------------------------------YSRAGDMDMARMLFDKCPE 276
+ VC YS+ G + +AR ++D+ PE
Sbjct: 555 AAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPE 614
Query: 277 KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKI 336
+ V +++ISGY++ G +++ +L+ M +G D + SIL A A S LG ++
Sbjct: 615 LDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQV 674
Query: 337 HASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQ 396
HA + + V ++ + MY+K G +D FS++ G DL++W ++I + HG+
Sbjct: 675 HAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP-DLIAWTALIASYAQHGK 733
Query: 397 GEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYG 456
+AL++++ M +GF+PDK TF+G+L AC+H GLV++ + NSM K YGI P+ HY
Sbjct: 734 ANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYV 793
Query: 457 CMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPS 516
CM+D L R G L EA + +M ++P+A+V GTLL AC++H +VEL + ++ +L PS
Sbjct: 794 CMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPS 853
Query: 517 DPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
D G + LSNI A+ G+W V R MK G QK G SS+
Sbjct: 854 DAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 231/488 (47%), Gaps = 33/488 (6%)
Query: 13 FSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQ-DLYVAPKLIAAFSLCRHISSAV 71
F+P R ++ + R NL K + A LL+ +L D+++ L++ +S ++ A
Sbjct: 47 FNPFRFFNDQ--SNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAA 104
Query: 72 NVFNQVPYPNVHLYNSLI---RAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKAC 128
+F+ +P P+V N +I + H L SL F F M G + +Y ++ AC
Sbjct: 105 KLFDTIPQPDVVSCNIMISGYKQHRL--FEESLRF--FSKMHFLGFEANEISYGSVISAC 160
Query: 129 TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVT 188
+ + +++ H K G++ V ++LID +S+ + + A ++F +
Sbjct: 161 SALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSK--NLRFEDAYKVFRDSLSANVYC 218
Query: 189 WNSMIGGLVRGGDLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELFDRML 244
WN++I G +R + F LF EM + D +++++L A ++ F +++
Sbjct: 219 WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLR-----FGKVV 273
Query: 245 QWNII---SWSTMVCG-----YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
Q +I + VC Y++ G M A +F + P ++V WT ++SGY +
Sbjct: 274 QARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAF 333
Query: 297 EATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFI 356
A ++ +M +G++ ++ + S+++AC M+ ++HA V + F + V A I
Sbjct: 334 SALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALI 393
Query: 357 DMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDK 416
MY+K G +D + +F + + N MI F + KA+ LF+ M+ EG D+
Sbjct: 394 SMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDE 453
Query: 417 YTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLR 476
++ LL L + Y +++ G+V + + L S+ G LEE+++L +
Sbjct: 454 FSVCSLLSVLDCLNLGKQVHGY--TLKS--GLVLDLTVGSSLFTLYSKCGSLEESYKLFQ 509
Query: 477 SMPVEPNA 484
+P + NA
Sbjct: 510 GIPFKDNA 517
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 289/552 (52%), Gaps = 15/552 (2%)
Query: 47 LHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTF 106
L DLYV LI + C + A+ +F+++ P++ ++S++ NGS P F
Sbjct: 92 LGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGS-PYQAVEFF 150
Query: 107 FHM-QREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
M V PD T L+ ACT S+ L + +H V + GF D+ + NSL++ Y++
Sbjct: 151 RRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAK 210
Query: 166 CGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM----PERDMVSWN 221
A+ LF + E+D ++W+++I V+ G A +F++M E ++ +
Sbjct: 211 --SRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVL 268
Query: 222 TMLDGYAKAGEMN---KAFELFDRM-LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK 277
+L A A ++ K EL R L+ + + +V Y + + A +F + P K
Sbjct: 269 CVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRK 328
Query: 278 NLVLWTTIISGYAEKGFMKEATVLYDKME-EAGLKPDDGVLISILTACAESGMLGLGKKI 336
++V W +ISG+ G + + M E +PD +++ +L +C+E G L K
Sbjct: 329 DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCF 388
Query: 337 HASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQ 396
H+ V + F + + + +++Y++CG L A +F+ + KD V W S+I G+G+HG+
Sbjct: 389 HSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI-ALKDTVVWTSLITGYGIHGK 447
Query: 397 GEKALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHY 455
G KALE F+ MV +P++ TF+ +L AC+HAGL+ +G F M Y + P +EHY
Sbjct: 448 GTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHY 507
Query: 456 GCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVP 515
++DLL R G L+ A E+ + MP P ++GTLLGACR+H + E+A +++ LF+L
Sbjct: 508 AVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELES 567
Query: 516 SDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHP 575
+ G + L+SN+Y G+W NV +R +K G +K S I F D HP
Sbjct: 568 NHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHP 627
Query: 576 KSDDIYQMIGRL 587
+ + +Y ++ L
Sbjct: 628 EKEPVYGLLKEL 639
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 242/483 (50%), Gaps = 24/483 (4%)
Query: 63 LCRHISSAVN---VFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNF 119
CR SS+V+ +F ++ +++ +N+L+++ + + + F HM R+ PDNF
Sbjct: 3 FCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYH-FSHMFRDEEKPDNF 61
Query: 120 TYPFLLKACTGPSSLPLVQMIHAHVEK-FGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLF 178
T P LKAC + +MIH V+K D++V +SLI Y +CG + A+R+F
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCG--RMIEALRMF 119
Query: 179 SAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM-------PER----DMVSWNTMLDGY 227
+E+ D VTW+SM+ G + G A + F M P+R +VS T L
Sbjct: 120 DELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSN- 178
Query: 228 AKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIIS 287
++ G F + R ++ ++++ Y+++ A LF EK+++ W+T+I+
Sbjct: 179 SRLGRCVHGF-VIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIA 237
Query: 288 GYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRC 347
Y + G EA ++++ M + G +P+ ++ +L ACA + L G+K H R
Sbjct: 238 CYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLET 297
Query: 348 STKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSM 407
KV A +DMY KC + A+ +FS++ +KD+VSW ++I GF ++G +++E FS M
Sbjct: 298 EVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 408 VHE-GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGG 466
+ E PD + +L +C+ G +++ + + + + K YG +++L SR G
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIK-YGFDSNPFIGASLVELYSRCG 415
Query: 467 HLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSN 526
L A ++ + ++ + +V +L+ +H A H+ K P + LS
Sbjct: 416 SLGNASKVFNGIALK-DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSI 474
Query: 527 IYA 529
+ A
Sbjct: 475 LSA 477
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/442 (22%), Positives = 194/442 (43%), Gaps = 37/442 (8%)
Query: 24 CTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVH 83
CT + SN L + +H +++ DL + L+ ++ R AVN+F + +V
Sbjct: 173 CT--KLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVI 230
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
++++I + NG+ F M +G P+ T +L+AC L + H
Sbjct: 231 SWSTVIACYVQNGAAAE-ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHEL 289
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
+ G ++ V +L+D Y +C + A +FS + +D V+W ++I G G
Sbjct: 290 AIRKGLETEVKVSTALVDMYMKC--FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAH 347
Query: 204 GAFKLFDEM-----PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTM 254
+ + F M D + +L ++ G + +A ++++ N +++
Sbjct: 348 RSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASL 407
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM-EEAGLKPD 313
V YSR G + A +F+ K+ V+WT++I+GY G +A ++ M + + +KP+
Sbjct: 408 VELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPN 467
Query: 314 DGVLISILTACAESGMLGLGKKIHA-SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
+ +SIL+AC+ +G++ G +I V R + + +D+ + G LD A I
Sbjct: 468 EVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEIT 527
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
+M +++ +H GE A ++ + FE + HAG
Sbjct: 528 KRMPFSPTPQILGTLLGACRIHQNGEMA----ETVAKKLFELES----------NHAG-- 571
Query: 433 DKGRNYFNSMEKVYGIVPQIEH 454
Y+ M VYG+ + E+
Sbjct: 572 -----YYMLMSNVYGVKGEWEN 588
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 181/583 (31%), Positives = 305/583 (52%), Gaps = 23/583 (3%)
Query: 23 LCTLHRCSNL-DLV--KQIHAQLL-KAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP 78
+ TL RC+ D V +QIH ++ K L L+ ++ C + AV VF
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGSE 123
Query: 79 YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQ 138
+V YN+LI +NGS P T+ M+ G+ PD +T+P LLK + L V+
Sbjct: 124 R-DVFGYNALISGFVVNGS-PLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVK 180
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERD-AVTWNSMIGGLV 197
+H K GF D +V + L+ SYS+ + ++ A ++F + +RD +V WN+++ G
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKF--MSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 198 RGGDLDGAFKLFDEMPERDM-VSWNTM---LDGYAKAGEMNKAFELFDRMLQW----NII 249
+ + A +F +M E + VS +T+ L + +G+++ + ++ +I+
Sbjct: 239 QIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIV 298
Query: 250 SWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
+ ++ Y ++ ++ A +F+ E++L W +++ + G L+++M +G
Sbjct: 299 VSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG 358
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHA----SVQRCRFRCSTKVLNAFIDMYAKCGCL 365
++PD L ++L C L G++IH S R + + N+ +DMY KCG L
Sbjct: 359 IRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDL 418
Query: 366 DAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA 425
A +F M KD SWN MI+G+GV GE AL++FS M G +PD+ TF+GLL A
Sbjct: 419 RDARMVFDSMR-VKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQA 477
Query: 426 CTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAI 485
C+H+G +++GRN+ ME VY I+P +HY C+ID+L R LEEA+EL S P+ N +
Sbjct: 478 CSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPV 537
Query: 486 VVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMK 545
V ++L +CR+H + +LA + L +L P G + L+SN+Y +AG + V VR M+
Sbjct: 538 VWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMR 597
Query: 546 NAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLV 588
+K G S I F + +HP+ I+ + ++
Sbjct: 598 QQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVI 640
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/511 (34%), Positives = 273/511 (53%), Gaps = 45/511 (8%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+ +HA L+ + + + +A KL+ + C + A VF+++P ++ +I A A N
Sbjct: 36 RVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARN 95
Query: 96 GSH-PSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
G + SL F F M ++G+ D F P LLKA +MIH V KF + D F
Sbjct: 96 GYYQESLDF--FREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
+ +SLID YS+ G VG A K+F ++ E
Sbjct: 154 IVSSLIDMYSKFGEVG---------------------------------NARKVFSDLGE 180
Query: 215 RDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMD-MARM 269
+D+V +N M+ GYA + ++A L M ++ ++I+W+ ++ G+S + + ++ +
Sbjct: 181 QDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEI 240
Query: 270 LFDKCPE---KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
L C + ++V WT+IISG ++A + +M GL P+ +I++L AC
Sbjct: 241 LELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTT 300
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS 386
+ GK+IH V +A +DMY KCG + A +F K T KK V++NS
Sbjct: 301 LAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRK-TPKKTTVTFNS 359
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
MI + HG +KA+ELF M G + D TF +L AC+HAGL D G+N F M+ Y
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 447 GIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARAL 506
IVP++EHY CM+DLL R G L EA+E++++M +EP+ V G LL ACR H ++ELAR
Sbjct: 420 RIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIA 479
Query: 507 SEHLFKLVPSDPGNFSLLSNIYAQAGDWMNV 537
++HL +L P + GN LL+++YA AG W +V
Sbjct: 480 AKHLAELEPENSGNGLLLTSLYANAGSWESV 510
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 177/601 (29%), Positives = 302/601 (50%), Gaps = 22/601 (3%)
Query: 15 PRRLLEEKLCTLHRCSNLDLVKQIHAQLL---KAHLHQDLYVAPKLIAAFSLCRHISSAV 71
P L E L S L + + IHA L+ ++ +D Y LI + CR A
Sbjct: 30 PIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRAR 89
Query: 72 NVFNQVPYPNVHLYNSLIRAHALNG---SHPSLTFSTFFHMQREGVYPDNFTYPFLLKAC 128
+F+ +P NV + ++++ + +G L S FF + P+ F + K+C
Sbjct: 90 KLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESR---PNEFVATVVFKSC 146
Query: 129 TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVT 188
+ + + H K+G FV N+L+ YS C G G A+R+ + D
Sbjct: 147 SNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNG--EAIRVLDDLPYCDLSV 204
Query: 189 WNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTM-----LDGYAKAGEMNKAFELFDRM 243
++S + G + G + + D V WN + L ++ ++N A ++ RM
Sbjct: 205 FSSALSGYLECGAFKEGLDVLRKTANEDFV-WNNLTYLSSLRLFSNLRDLNLALQVHSRM 263
Query: 244 LQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEAT 299
+++ + + ++ Y + G + A+ +FD +N+ L TTI+ Y + +EA
Sbjct: 264 VRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEAL 323
Query: 300 VLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMY 359
L+ KM+ + P++ +L + AE +L G +H V + +R V NA ++MY
Sbjct: 324 NLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMY 383
Query: 360 AKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTF 419
AK G ++ A FS MT + D+V+WN+MI G HG G +ALE F M+ G P++ TF
Sbjct: 384 AKSGSIEDARKAFSGMTFR-DIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITF 442
Query: 420 IGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP 479
IG+L AC+H G V++G +YFN + K + + P I+HY C++ LLS+ G ++A + +R+ P
Sbjct: 443 IGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAP 502
Query: 480 VEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVAS 539
+E + + TLL AC + + L + ++E+ + P+D G + LLSNI+A++ +W VA
Sbjct: 503 IEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAK 562
Query: 540 VRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPG 599
VR M N G +K G S I F D+ HP+ IY + ++ ++ +GY P
Sbjct: 563 VRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPD 622
Query: 600 I 600
+
Sbjct: 623 V 623
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/564 (30%), Positives = 290/564 (51%), Gaps = 14/564 (2%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L T +L++ Q H+ ++K L ++L+V L+ ++ C + A +F ++ +
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
+N++I ++ + + S F F M G+ D LKACT L + +H
Sbjct: 495 VTWNTIIGSY-VQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
K G D+ +SLID YS+CG I A ++FS++ E V+ N++I G + +L
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGI--IKDARKVFSSLPEWSVVSMNALIAGYSQN-NL 610
Query: 203 DGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWS-----T 253
+ A LF EM R + +++ T+++ K + + ++ + S +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670
Query: 254 MVCGYSRAGDMDMARMLFDKCPE-KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP 312
++ Y + M A LF + K++VLWT ++SG+++ GF +EA Y +M G+ P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
D +++L C+ L G+ IH+ + N IDMYAKCG + + +F
Sbjct: 731 DQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVF 790
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
+M + ++VSWNS+I+G+ +G E AL++F SM PD+ TF+G+L AC+HAG V
Sbjct: 791 DEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 433 DKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLG 492
GR F M YGI +++H CM+DLL R G+L+EA + + + ++P+A + +LLG
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLG 910
Query: 493 ACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKP 552
ACR+H D +E L +L P + + LLSNIYA G W ++R M++ G +K
Sbjct: 911 ACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKV 970
Query: 553 SGASSIXXXXXXXXFTVFDHSHPK 576
G S I F D SH +
Sbjct: 971 PGYSWIDVEQRTHIFAAGDKSHSE 994
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 136/498 (27%), Positives = 242/498 (48%), Gaps = 36/498 (7%)
Query: 14 SPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNV 73
S R L L + +NLDL +HA+ +K L ++YV L++ +S C + +A V
Sbjct: 325 STRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 74 FNQVPYPNVHLYNSLIRAHALNG-SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS 132
F + N +N++IR +A NG SH + F M+ G D+FT+ LL C
Sbjct: 385 FEALEEKNDVFWNAMIRGYAHNGESHKVMEL--FMDMKSSGYNIDDFTFTSLLSTCAASH 442
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
L + H+ + K +++FV N+L+D Y++CG ++ A ++F M +RD VTWN++
Sbjct: 443 DLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG--ALEDARQIFERMCDRDNVTWNTI 500
Query: 193 IGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKA---------GEMNKAFEL---F 240
IG V+ + AF LF M +VS L KA G+ +
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGL 560
Query: 241 DRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATV 300
DR L + S+++ YS+ G + AR +F PE ++V +I+GY++ ++EA V
Sbjct: 561 DRDLH----TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVV 615
Query: 301 LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLN-AFIDMY 359
L+ +M G+ P + +I+ AC + L LG + H + + F + L + + MY
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 360 AKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTF 419
+ A +FS+++ K +V W M+ G +G E+AL+ + M H+G PD+ TF
Sbjct: 676 MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATF 735
Query: 420 IGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEH------YGCMIDLLSRGGHLEEAFE 473
+ +L C+ + +GR ++ ++ + H +ID+ ++ G ++ + +
Sbjct: 736 VTVLRVCSVLSSLREGR-------AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQ 788
Query: 474 LLRSMPVEPNAIVVGTLL 491
+ M N + +L+
Sbjct: 789 VFDEMRRRSNVVSWNSLI 806
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/535 (24%), Positives = 227/535 (42%), Gaps = 84/535 (15%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
L + K +H++ L + + + ++ ++ C +S A F+ + +V +NS++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSM 134
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
++ G P +F + ++P+ FT+ +L C +++ + IH + K G
Sbjct: 135 YSSIGK-PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG----------- 200
+ + +L+D Y++C I A R+F + + + V W + G V+ G
Sbjct: 194 NSYCGGALVDMYAKCDR--ISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 201 ------------------------DLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKA 236
L A LF EM D+V+WN M+ G+ K G A
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVA 311
Query: 237 FELFDRM---------------------------------------LQWNIISWSTMVCG 257
E F M L NI S++V
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
YS+ M+ A +F+ EKN V W +I GYA G + L+ M+ +G DD
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 318 ISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG 377
S+L+ CA S L +G + H+ + + + + V NA +DMYAKCG L+ A IF +M
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC- 490
Query: 378 KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN 437
+D V+WN++I + +A +LF M G D L ACTH + +G+
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 438 YFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP----VEPNAIVVG 488
+ + G+ + +ID+ S+ G +++A ++ S+P V NA++ G
Sbjct: 551 -VHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAG 604
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/517 (26%), Positives = 235/517 (45%), Gaps = 49/517 (9%)
Query: 73 VFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS 132
+F ++ P+V +N +I H G ++ FF+M++ V T +L A +
Sbjct: 283 LFGEMSSPDVVAWNVMISGHGKRGCE-TVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
+L L ++HA K G +I+V +SL+ YS+C ++ A ++F A+EE++ V WN+M
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE--KMEAAAKVFEALEEKNDVFWNAM 399
Query: 193 IGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAG--EMNKAFE--LFDRML 244
I G G+ +LF +M D ++ ++L A + EM F + + L
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
N+ + +V Y++ G ++ AR +F++ +++ V W TII Y + EA L+ +
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
M G+ D L S L AC L GK++H +C ++ IDMY+KCG
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGI 579
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
+ A +FS + + +VS N++I G+ E+A+ LF M+ G P + TF ++
Sbjct: 580 IKDARKVFSSLP-EWSVVSMNALIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 425 AC----------------THAGLVDKGRN--------YFNS--MEKVYGIVPQIEH---- 454
AC T G +G Y NS M + + ++
Sbjct: 638 ACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI 697
Query: 455 --YGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGACRMHNDVELARALSEH 509
+ M+ S+ G EEA + + M V P+ T+L C + + + RA+
Sbjct: 698 VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSL 757
Query: 510 LFKLVPS-DPGNFSLLSNIYAQAGDWMNVASVRLQMK 545
+F L D + L ++YA+ GD + V +M+
Sbjct: 758 IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/361 (21%), Positives = 153/361 (42%), Gaps = 49/361 (13%)
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
+L + + +H+ G + + N+++D Y++C V A + F +E +D WNSM
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSY--AEKQFDFLE-KDVTAWNSM 131
Query: 193 IG---GLVRGGDLDGAF-KLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM----L 244
+ + + G + +F LF+ + +++ +L A+ + ++ M L
Sbjct: 132 LSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
+ N +V Y++ + AR +F+ + N V WT + SGY + G +EA +++++
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
M + G +PD +++ I+ Y + G
Sbjct: 252 MRDEGHRPDHLAFVTV-----------------------------------INTYIRLGK 276
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
L A +F +M+ D+V+WN MI G G G A+E F +M + + T +L
Sbjct: 277 LKDARLLFGEMSS-PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 425 ACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNA 484
A +D G K+ G+ I ++ + S+ +E A ++ ++ E N
Sbjct: 336 AIGIVANLDLGLVVHAEAIKL-GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKND 393
Query: 485 I 485
+
Sbjct: 394 V 394
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 175/594 (29%), Positives = 276/594 (46%), Gaps = 75/594 (12%)
Query: 34 LVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHA 93
L + IH ++K+ D+ VA L+ ++ +++ VF+++P +V +N++I
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 94 LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
+G F M+ G P++ + + AC+ L + IH K GF D
Sbjct: 185 QSGEAEK-ALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
+V ++L+D Y +C L+ A ++F +MP
Sbjct: 244 YVNSALVDMYGKCDC---------------------------------LEVAREVFQKMP 270
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRML------QWNIISWSTMVCGYSR------- 260
+ +V+WN+M+ GY G+ E+ +RM+ ++ M C SR
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKF 330
Query: 261 --------------------------AGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGF 294
G+ ++A +F K + W +IS Y G
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 295 MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNA 354
+A +YD+M G+KPD S+L AC++ L GK+IH S+ R +L+A
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSA 450
Query: 355 FIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEP 414
+DMY+KCG AF IF+ + KKD+VSW MI +G HGQ +AL F M G +P
Sbjct: 451 LLDMYSKCGNEKEAFRIFNSIP-KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 415 DKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFEL 474
D T + +L AC HAGL+D+G +F+ M YGI P IEHY CMID+L R G L EA+E+
Sbjct: 510 DGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
Query: 475 LRSMP-VEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGD 533
++ P NA ++ TL AC +H + L ++ L + P D + +L N+YA
Sbjct: 570 IQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGES 629
Query: 534 WMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRL 587
W VRL+MK G +K G S I F D SH +++++Y+ + L
Sbjct: 630 WDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALL 683
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/471 (29%), Positives = 234/471 (49%), Gaps = 19/471 (4%)
Query: 23 LCTLHRCSN----LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP 78
L L C+N L +K +H ++L L +D+ + LI + C+ SA +VF
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFD 66
Query: 79 Y-PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGV-YPDNFTYPFLLKACTGPSSLPL 136
+V+++NSL+ ++ N T F + + PD+FT+P ++KA L
Sbjct: 67 IRSDVYIWNSLMSGYSKNSMFHD-TLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 137 VQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGL 196
+MIH V K G+ D+ V +SL+ Y++ + ++++F M ERD +WN++I
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFN--LFENSLQVFDEMPERDVASWNTVISCF 183
Query: 197 VRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ--WNIIS 250
+ G+ + A +LF M E + VS + ++ + + E+ + ++ + +
Sbjct: 184 YQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDE 243
Query: 251 W--STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEA 308
+ S +V Y + +++AR +F K P K+LV W ++I GY KG K + ++M
Sbjct: 244 YVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAA 368
G +P L SIL AC+ S L GK IH V R V + ID+Y KCG + A
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLA 363
Query: 369 FGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTH 428
+FSK T K SWN MI + G KA+E++ MV G +PD TF +L AC+
Sbjct: 364 ETVFSK-TQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQ 422
Query: 429 AGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP 479
++KG+ S+ + ++ ++D+ S+ G+ +EAF + S+P
Sbjct: 423 LAALEKGKQIHLSISESRLETDEL-LLSALLDMYSKCGNEKEAFRIFNSIP 472
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 14/272 (5%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
R NL K IH ++++ ++ D+YV LI + C + A VF++ +N
Sbjct: 321 RSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNV 380
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
+I ++ G+ + M GV PD T+ +L AC+ ++L + IH + +
Sbjct: 381 MISSYISVGNWFK-AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES 439
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
D + ++L+D YS+CG A R+F+++ ++D V+W MI G A
Sbjct: 440 RLETDELLLSALLDMYSKCGNE--KEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALY 497
Query: 208 LFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRM-----LQWNIISWSTMVCGY 258
FDEM + D V+ +L AG +++ + F +M ++ I +S M+
Sbjct: 498 QFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 259 SRAGDMDMARMLFDKCPEK--NLVLWTTIISG 288
RAG + A + + PE N L +T+ S
Sbjct: 558 GRAGRLLEAYEIIQQTPETSDNAELLSTLFSA 589
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 46/198 (23%)
Query: 25 TLHRCSNLDLV---KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
L CS L + KQIH + ++ L D + L+ +S C + A +FN +P +
Sbjct: 416 VLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKD 475
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
V + +I A+ +G P F MQ+ G+ PD T +L AC H
Sbjct: 476 VVSWTVMISAYGSHG-QPREALYQFDEMQKFGLKPDGVTLLAVLSACG-----------H 523
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVT-----WNSMIGGL 196
A + ID ++ FS M + + ++ MI L
Sbjct: 524 AGL--------------------------IDEGLKFFSQMRSKYGIEPIIEHYSCMIDIL 557
Query: 197 VRGGDLDGAFKLFDEMPE 214
R G L A+++ + PE
Sbjct: 558 GRAGRLLEAYEIIQQTPE 575
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 177/581 (30%), Positives = 291/581 (50%), Gaps = 60/581 (10%)
Query: 17 RLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQ 76
R KL L CS+ +K IH LL+ HL D++VA +L+A LC S+ N
Sbjct: 10 RFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLA---LCVDDSTFNKPTNL 66
Query: 77 VPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPL 136
+ Y + F +Q P+ F + L++ C + P
Sbjct: 67 LGY----------------------AYGIFSQIQN----PNLFVFNLLIR-CFSTGAEP- 98
Query: 137 VQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGL 196
+ FGFY + D+ + L A E + V ++G
Sbjct: 99 -------SKAFGFYTQMLKSRIWPDNIT---------FPFLIKASSEMECV----LVGEQ 138
Query: 197 VRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVC 256
+ F + D+ N+++ YA G + A +F +M +++SW++MV
Sbjct: 139 THSQIVRFGF-------QNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVA 191
Query: 257 GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
GY + G ++ AR +FD+ P +NL W+ +I+GYA+ ++A L++ M+ G+ ++ V
Sbjct: 192 GYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETV 251
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
++S++++CA G L G++ + V + + + A +DM+ +CG ++ A +F +
Sbjct: 252 MVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLP 311
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
+ D +SW+S+I G VHG KA+ FS M+ GF P TF +L AC+H GLV+KG
Sbjct: 312 -ETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGL 370
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRM 496
+ +M+K +GI P++EHYGC++D+L R G L EA + M V+PNA ++G LLGAC++
Sbjct: 371 EIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKI 430
Query: 497 HNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
+ + E+A + L K+ P G + LLSNIYA AG W + S+R MK +KP G S
Sbjct: 431 YKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Query: 557 SIXXXXXXXXFTVF-DHSHPKSDDIYQMIGRLVHDLRQVGY 596
I FT+ D HP+ I + ++ +R +GY
Sbjct: 491 LIEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGY 531
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/452 (32%), Positives = 248/452 (54%), Gaps = 14/452 (3%)
Query: 164 SRCGGVGIDGAMR----LFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER---- 215
++C G + +M +F +++ +N+MI G V + A ++EM +R
Sbjct: 71 AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEP 130
Query: 216 DMVSWNTMLDGYAKAGEMNKAFEL----FDRMLQWNIISWSTMVCGYSRAGDMDMARMLF 271
D ++ +L + + + ++ F L+ ++ ++++ Y R G+M+++ +F
Sbjct: 131 DNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVF 190
Query: 272 DKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM-EEAGLKPDDGVLISILTACAESGML 330
+K K W++++S A G E +L+ M E LK ++ ++S L ACA +G L
Sbjct: 191 EKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGAL 250
Query: 331 GLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHG 390
LG IH + R + V + +DMY KCGCLD A IF KM + +L ++++MI G
Sbjct: 251 NLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNL-TYSAMISG 309
Query: 391 FGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP 450
+HG+GE AL +FS M+ EG EPD ++ +L AC+H+GLV +GR F M K + P
Sbjct: 310 LALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEP 369
Query: 451 QIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHL 510
EHYGC++DLL R G LEEA E ++S+P+E N ++ T L CR+ ++EL + ++ L
Sbjct: 370 TAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQEL 429
Query: 511 FKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVF 570
KL +PG++ L+SN+Y+Q W +VA R ++ G ++ G S + F
Sbjct: 430 LKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQ 489
Query: 571 DHSHPKSDDIYQMIGRLVHDLRQVGYVPGIYQ 602
D SHPK +IY+M+ ++ L+ GY P + Q
Sbjct: 490 DRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQ 521
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 115/389 (29%), Positives = 189/389 (48%), Gaps = 29/389 (7%)
Query: 20 EEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRH------ISSAVNV 73
+E L L RC N+D KQ+HA+ +K L + + A C H ++ A ++
Sbjct: 31 QECLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLA--KCAHSGWENSMNYAASI 88
Query: 74 FNQVPYPNVHLYNSLIRAHA-LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS 132
F + P +N++IR + + +L F + M + G PDNFTYP LLKACT
Sbjct: 89 FRGIDDPCTFDFNTMIRGYVNVMSFEEALCF--YNEMMQRGNEPDNFTYPCLLKACTRLK 146
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
S+ + IH V K G D+FV NSLI+ Y RCG + + A +F +E + A +W+SM
Sbjct: 147 SIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSA--VFEKLESKTAASWSSM 204
Query: 193 IGGLVRGGDLDGAFKLFDEM--------PERDMVSWNTMLDGYAKAGEMNKAFE----LF 240
+ G LF M E MVS L A G +N L
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVS---ALLACANTGALNLGMSIHGFLL 261
Query: 241 DRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATV 300
+ + NII +++V Y + G +D A +F K ++N + ++ +ISG A G + A
Sbjct: 262 RNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALR 321
Query: 301 LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHAS-VQRCRFRCSTKVLNAFIDMY 359
++ KM + GL+PD V +S+L AC+ SG++ G+++ A ++ + + + +D+
Sbjct: 322 MFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLL 381
Query: 360 AKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
+ G L+ A + +K+ V W + +
Sbjct: 382 GRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/574 (28%), Positives = 286/574 (49%), Gaps = 47/574 (8%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVHLYNSLIRAH 92
++ ++ + ++L ++++++ ++ A+ + +++ P++ +NSL+ +
Sbjct: 141 ELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGY 200
Query: 93 ALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYED 152
A G + MQ G+ P + LL+A P L L + IH ++ + + D
Sbjct: 201 ASKGLSKD-AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYD 259
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
++V +LID Y ++ G L A +FD M
Sbjct: 260 VYVETTLIDMY---------------------------------IKTGYLPYARMVFDMM 286
Query: 213 PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----ISWSTMVCGYSRAGDMDMAR 268
+++V+WN+++ G + A + A L RM + I I+W+++ GY+ G + A
Sbjct: 287 DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 269 MLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
+ K EK N+V WT I SG ++ G + A ++ KM+E G+ P+ + ++L
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKIL 406
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
+L GK++H R C V A +DMY K G L +A IF + K L SW
Sbjct: 407 GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK-NKSLASW 465
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
N M+ G+ + G+GE+ + FS M+ G EPD TF +L C ++GLV +G YF+ M
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Query: 445 VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELAR 504
YGI+P IEH CM+DLL R G+L+EA++ +++M ++P+A + G L +C++H D+ELA
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAE 585
Query: 505 ALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXX 564
+ L L P + N+ ++ N+Y+ W +V +R M+N + S I
Sbjct: 586 IAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTV 645
Query: 565 XXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F +HP DIY + +LV ++++ GYVP
Sbjct: 646 HIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVP 679
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 168/401 (41%), Gaps = 80/401 (19%)
Query: 168 GVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGY 227
G+ I G + + ++ D ++ +G R L A KLFDEMP+RD ++WN ++
Sbjct: 6 GLTIHGGL-IKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 228 AKAGEMNKAFELFDRM---------------------------------------LQWNI 248
++G KA ELF M L+ N+
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 249 ISWSTMVCGYSRAGDMDMARMLFDKCPEKNL----------------------------- 279
++++ YSR G ++++R +F+ ++NL
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 280 ------VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
V W +++SGYA KG K+A + +M+ AGLKP + S+L A AE G L LG
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGV 393
K IH + R + V IDMY K G L A +F M K++V+WNS++ G
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA-KNIVAWNSLVSGLSY 303
Query: 394 HGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIE 453
+ A L M EG +PD T+ L G +K + M K G+ P +
Sbjct: 304 ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVV 362
Query: 454 HYGCMIDLLSRGGHLEEAFELLRSMPVE---PNAIVVGTLL 491
+ + S+ G+ A ++ M E PNA + TLL
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 274/551 (49%), Gaps = 76/551 (13%)
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
+I+A+ + S + F Q V+ + L+ A S+ L +++H V K
Sbjct: 1 MIKANVYSCSKFRFLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKS 60
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
Y F+ + L+ Y R G D A K
Sbjct: 61 VSYRHGFIGDQLVGCYLRLG----------------HDVC-----------------AEK 87
Query: 208 LFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML------QWNIISWSTMVCG---- 257
LFDEMPERD+VSWN+++ GY+ G + K FE+ RM+ + N +++ +M+
Sbjct: 88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYG 147
Query: 258 -------------------------------YSRAGDMDMARMLFDKCPEKNLVLWTTII 286
Y + GD+ + LF+ KNLV W T+I
Sbjct: 148 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 207
Query: 287 SGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFR 346
+ + G ++ ++ G +PD +++L +C + G++ L + IH + F
Sbjct: 208 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 267
Query: 347 CSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSS 406
+ + A +D+Y+K G L+ + +F ++T D ++W +M+ + HG G A++ F
Sbjct: 268 GNKCITTALLDLYSKLGRLEDSSTVFHEITSP-DSMAWTAMLAAYATHGFGRDAIKHFEL 326
Query: 407 MVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGG 466
MVH G PD TF LL AC+H+GLV++G++YF +M K Y I P+++HY CM+DLL R G
Sbjct: 327 MVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSG 386
Query: 467 HLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSN 526
L++A+ L++ MP+EP++ V G LLGACR++ D +L +E LF+L P D N+ +LSN
Sbjct: 387 LLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSN 446
Query: 527 IYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGR 586
IY+ +G W + + +R MK G + SG S I F V D SHP+S+ I + +
Sbjct: 447 IYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKE 506
Query: 587 LVHDLR-QVGY 596
+ ++ ++GY
Sbjct: 507 IRKKMKSEMGY 517
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/555 (29%), Positives = 298/555 (53%), Gaps = 15/555 (2%)
Query: 50 DLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHM 109
D+ V ++ + C H+ A ++F+Q+ ++ +N++I +A G+ + + M
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEI-LKLLYRM 236
Query: 110 QREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV 169
+ +G+ PD T+ L L + +M+H + K GF D+ + +LI Y +CG
Sbjct: 237 RGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKE 296
Query: 170 GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER--DMVS--WNTMLD 225
+ + R+ + +D V W MI GL+R G + A +F EM + D+ S +++
Sbjct: 297 --EASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVA 354
Query: 226 GYAKAGEMNKAFELFDRMLQ----WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL 281
A+ G + + +L+ + + ++++ Y++ G +D + ++F++ E++LV
Sbjct: 355 SCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVS 414
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDG-VLISILTACAESGMLGLGKKIHASV 340
W IISGYA+ + +A +L+++M+ ++ D ++S+L AC+ +G L +GK IH V
Sbjct: 415 WNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIV 474
Query: 341 QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
R R + V A +DMY+KCG L+AA F ++ K D+VSW +I G+G HG+G+ A
Sbjct: 475 IRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIA 533
Query: 401 LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMID 460
LE++S +H G EP+ F+ +L +C+H G+V +G F+SM + +G+ P EH C++D
Sbjct: 534 LEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVD 593
Query: 461 LLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGN 520
LL R +E+AF+ + P+ V+G +L ACR + E+ + E + +L P D G+
Sbjct: 594 LLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGH 653
Query: 521 FSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDI 580
+ L + +A W +V+ QM++ G +K G S I F + SH SDD
Sbjct: 654 YVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDT 711
Query: 581 YQMIGRLVHDLRQVG 595
++ L ++ Q G
Sbjct: 712 VSLLKLLSREMMQFG 726
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 148/539 (27%), Positives = 234/539 (43%), Gaps = 118/539 (21%)
Query: 72 NVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGP 131
+V N Y +NS I + +G H + STF M + PD FT+P LLKAC
Sbjct: 6 SVLNSTKY-----FNSHINHLSSHGDHKQV-LSTFSSMLANKLLPDTFTFPSLLKACASL 59
Query: 132 SSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNS 191
L IH V GF D ++ +SL++ Y++ G + A ++F M ERD V W +
Sbjct: 60 QRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLA--HARKVFEEMRERDVVHWTA 117
Query: 192 MIGGLVRGGDLDGAFKLFDEMP------------------------------------ER 215
MIG R G + A L +EM +
Sbjct: 118 MIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDC 177
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAG------------- 262
D+ N+ML+ Y K + A +LFD+M Q +++SW+TM+ GY+ G
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 263 ----------------------DMDMARML--------FD--------------KCPEK- 277
D++M RML FD KC ++
Sbjct: 238 GDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEE 297
Query: 278 ------------NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA 325
++V WT +ISG G ++A +++ +M ++G + S++ +CA
Sbjct: 298 ASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCA 357
Query: 326 ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
+ G LG +H V R + T LN+ I MYAKCG LD + IF +M ++DLVSWN
Sbjct: 358 QLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWN 416
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEP-DKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
++I G+ + KAL LF M + + D +T + LL AC+ AG + G+ + +
Sbjct: 417 AIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIR 476
Query: 445 VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
+ I P ++D+ S+ G+LE A S+ + + + G L+ H ++A
Sbjct: 477 SF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGKGDIA 533
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 8/220 (3%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
+ DL +H +L+ D LI ++ C H+ ++ +F ++ ++ +N++I
Sbjct: 361 SFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIIS 420
Query: 91 AHALNGSHPSLTFSTFFHMQREGVYP-DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF 149
+A N F M+ + V D+FT LL+AC+ +LP+ ++IH V +
Sbjct: 421 GYAQNVDLCK-ALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI 479
Query: 150 YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
V +L+D YS+CG ++ A R F ++ +D V+W +I G G D A +++
Sbjct: 480 RPCSLVDTALVDMYSKCG--YLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIY 537
Query: 210 DEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRMLQ 245
E M V + +L + G + + ++F M++
Sbjct: 538 SEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVR 577
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 180/583 (30%), Positives = 279/583 (47%), Gaps = 56/583 (9%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
LI L R I A VFNQVP P+V LY +I G S ++ E
Sbjct: 41 LICNHLLSRRIDEAREVFNQVPSPHVSLYTKMI-----TGYTRSNRLVDALNLFDEMPVR 95
Query: 117 DNFTYPFLLKACTGPSSL-PLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM 175
D ++ ++ C + V++ E+ + ++++ R G V D A
Sbjct: 96 DVVSWNSMISGCVECGDMNTAVKLFDEMPER-----SVVSWTAMVNGCFRSGKV--DQAE 148
Query: 176 RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNK 235
RLF M +D WNSM+ G ++ G +D A KLF +MP ++++SW TM+ G + +
Sbjct: 149 RLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGE 208
Query: 236 AFELFDRMLQWNIISWS---------------------------------------TMVC 256
A +LF ML+ I S S +++
Sbjct: 209 ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLIT 268
Query: 257 GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
Y+ + +R +FD+ + + +WT ++SGY+ ++A ++ M + P+
Sbjct: 269 FYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
S L +C+ G L GK++H + V N+ + MY+ G ++ A +F K+
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
KK +VSWNS+I G HG+G+ A +F M+ EPD+ TF GLL AC+H G ++KGR
Sbjct: 389 -KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGR 447
Query: 437 NYFNSMEK-VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACR 495
F M + I +I+HY CM+D+L R G L+EA EL+ M V+PN +V LL ACR
Sbjct: 448 KLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACR 507
Query: 496 MHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGA 555
MH+DV+ + +F L + LLSNIYA AG W NV+ +R++MK G K G+
Sbjct: 508 MHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGS 567
Query: 556 SSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
S + F F P IY+ + L L+++GY P
Sbjct: 568 SWVVIRGKKHEF--FSGDQPHCSRIYEKLEFLREKLKELGYAP 608
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 283/547 (51%), Gaps = 18/547 (3%)
Query: 22 KLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
K CT +LD K+IH QL+K ++ V L+ ++ C I SA VFN + N
Sbjct: 150 KACT--ELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRN 206
Query: 82 VHLYNSLIRAHALNG-SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
V + S+I + N L F M+ V + +TY L+ ACT S+L +
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVL--FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWF 264
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
H + K G + SL+D Y +CG I A R+F+ D V W +MI G G
Sbjct: 265 HGCLVKSGIELSSCLVTSLLDMYVKCGD--ISNARRVFNEHSHVDLVMWTAMIVGYTHNG 322
Query: 201 DLDGAFKLFDEMP----ERDMVSWNTMLDGYA--KAGEMNKAFE-LFDRMLQWNIISWST 253
++ A LF +M + + V+ ++L G + E+ ++ L ++ W+ +
Sbjct: 323 SVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANA 382
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
+V Y++ A+ +F+ EK++V W +IISG+++ G + EA L+ +M + P+
Sbjct: 383 LVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPN 442
Query: 314 DGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL--NAFIDMYAKCGCLDAAFGI 371
+ S+ +ACA G L +G +HA + F S+ V A +D YAKCG +A I
Sbjct: 443 GVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLI 502
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGL 431
F + +K+ ++W++MI G+G G +LELF M+ + +P++ TF +L AC H G+
Sbjct: 503 FDTIE-EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGM 561
Query: 432 VDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLL 491
V++G+ YF+SM K Y P +HY CM+D+L+R G LE+A +++ MP++P+ G L
Sbjct: 562 VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFL 621
Query: 492 GACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQK 551
C MH+ +L + + + L P D + L+SN+YA G W VR MK G K
Sbjct: 622 HGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSK 681
Query: 552 PSGASSI 558
+G S++
Sbjct: 682 IAGHSTM 688
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 243/516 (47%), Gaps = 18/516 (3%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
L +C+N+D ++Q H L L D+ +A KL++ + + A VF+Q+P P+ +L+
Sbjct: 51 LSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLW 110
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
++R + LN + + + + G D+ + LKACT L + IH +
Sbjct: 111 KVMLRCYCLNKESVEVV-KLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV 169
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
K ++++ V L+D Y++CG I A ++F+ + R+ V W SMI G V+ +
Sbjct: 170 KVPSFDNV-VLTGLLDMYAKCG--EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEG 226
Query: 206 FKLFDEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG---- 257
LF+ M E +++ ++ T++ K +++ +++ I S +V
Sbjct: 227 LVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDM 286
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
Y + GD+ AR +F++ +LV+WT +I GY G + EA L+ KM+ +KP+ +
Sbjct: 287 YVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 318 ISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG 377
S+L+ C L LG+ +H + T V NA + MYAKC A +F +M
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGIW-DTNVANALVHMYAKCYQNRDAKYVF-EMES 404
Query: 378 KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN 437
+KD+V+WNS+I GF +G +AL LF M E P+ T L AC G + G +
Sbjct: 405 EKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSS 464
Query: 438 YFNSMEKVYGIVPQIEHYG-CMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRM 496
K+ + H G ++D ++ G + A L+ E N I ++G
Sbjct: 465 LHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTITWSAMIGGYGK 523
Query: 497 HNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAG 532
D + L E + K N S ++I + G
Sbjct: 524 QGDTIGSLELFEEMLK--KQQKPNESTFTSILSACG 557
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 296/611 (48%), Gaps = 80/611 (13%)
Query: 31 NLDLVKQ---IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
NL +VKQ +H LK+ ++ + V L+A + R + A VF+++ + YN+
Sbjct: 219 NLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNT 278
Query: 88 LIRAH-ALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEK 146
+I + L S+ F + PD T +L+AC L L + I+ ++ K
Sbjct: 279 MICGYLKLEMVEESVRM---FLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK 335
Query: 147 FGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAF 206
GF + V N LID Y++CG D+ A
Sbjct: 336 AGFVLESTVRNILIDVYAKCG---------------------------------DMITAR 362
Query: 207 KLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML----QWNIISWSTMVCGYSRAG 262
+F+ M +D VSWN+++ GY ++G++ +A +LF M+ Q + I++ ++ +R
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 263 DMDMARML----------------------FDKCPE-------------KNLVLWTTIIS 287
D+ + L + KC E + V W T+IS
Sbjct: 423 DLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVIS 482
Query: 288 GYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRC 347
G + +M ++ + PD + L CA LGK+IH + R +
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYES 542
Query: 348 STKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSM 407
++ NA I+MY+KCGCL+ + +F +M+ ++D+V+W MI+ +G++G+GEKALE F+ M
Sbjct: 543 ELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGEGEKALETFADM 601
Query: 408 VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGH 467
G PD FI ++ AC+H+GLVD+G F M+ Y I P IEHY C++DLLSR
Sbjct: 602 EKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQK 661
Query: 468 LEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNI 527
+ +A E +++MP++P+A + ++L ACR D+E A +S + +L P DPG L SN
Sbjct: 662 ISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNA 721
Query: 528 YAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRL 587
YA W V+ +R +K+ K G S I F+ D S P+S+ IY+ + L
Sbjct: 722 YAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEIL 781
Query: 588 VHDLRQVGYVP 598
+ + GY+P
Sbjct: 782 YSLMAKEGYIP 792
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/505 (27%), Positives = 250/505 (49%), Gaps = 26/505 (5%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQV-PYPNVHL 84
L SNL+ +++IHA ++ L + + KLI +S R +S+++VF +V P NV+L
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYL 73
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
+NS+IRA + NG P + ++ V PD +T+P ++KAC G + +++ +
Sbjct: 74 WNSIIRAFSKNGLFPE-ALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDG 204
GF D+FV N+L+D YSR G + A ++F M RD V+WNS+I G G +
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMG--LLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 205 AFKLFDEMPER----DMVSWNTMLDGY-----AKAGEMNKAFEL--FDRMLQWNIISWST 253
A +++ E+ D + +++L + K G+ F L +
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVA 250
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLY-DKMEEAGLKP 312
M + R D AR +FD+ ++ V + T+I GY + ++E+ ++ + +++ KP
Sbjct: 251 MYLKFRRPTD---ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKP 305
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
D + S+L AC L L K I+ + + F + V N ID+YAKCG + A +F
Sbjct: 306 DLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVF 365
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
+ M KD VSWNS+I G+ G +A++LF M+ + D T++ L+ T +
Sbjct: 366 NSMEC-KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADL 424
Query: 433 DKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLG 492
G+ ++ K GI + +ID+ ++ G + ++ ++ SM + + T++
Sbjct: 425 KFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGT-GDTVTWNTVIS 482
Query: 493 ACRMHNDVELARALSEHLFK--LVP 515
AC D ++ + K +VP
Sbjct: 483 ACVRFGDFATGLQVTTQMRKSEVVP 507
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 174/381 (45%), Gaps = 20/381 (5%)
Query: 122 PFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYS--RCGGVGIDGAMRLFS 179
PF+ +A + S+L ++ IHA V G F LID YS R + R+
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 180 AMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKA------GEM 233
A ++ WNS+I + G A + + ++ E + KA EM
Sbjct: 68 A---KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEM 124
Query: 234 NKAF--ELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAE 291
++ D + ++ + +V YSR G + AR +FD+ P ++LV W ++ISGY+
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
G+ +EA +Y +++ + + PD + S+L A ++ G+ +H + V
Sbjct: 185 HGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVV 244
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
N + MY K A +F +M +D VS+N+MI G+ E+++ +F + +
Sbjct: 245 NNGLVAMYLKFRRPTDARRVFDEM-DVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ- 302
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
F+PD T +L AC H + + +N M K G V + +ID+ ++ G + A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKA-GFVLESTVRNILIDVYAKCGDMITA 361
Query: 472 FELLRSM----PVEPNAIVVG 488
++ SM V N+I+ G
Sbjct: 362 RDVFNSMECKDTVSWNSIISG 382
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 138/390 (35%), Positives = 231/390 (59%), Gaps = 6/390 (1%)
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDK 273
++D ++L+ Y+ G++ A +FD ++ +W+++V Y++AG +D AR LFD+
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDE 153
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKME-----EAGLKPDDGVLISILTACAESG 328
PE+N++ W+ +I+GY G KEA L+ +M+ EA ++P++ + ++L+AC G
Sbjct: 154 MPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLG 213
Query: 329 MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
L GK +HA + + + A IDMYAKCG L+ A +F+ + KKD+ ++++MI
Sbjct: 214 ALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 389 HGFGVHGQGEKALELFSSMV-HEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYG 447
++G ++ +LFS M + P+ TF+G+L AC H GL+++G++YF M + +G
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 448 IVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALS 507
I P I+HYGCM+DL R G ++EA + SMP+EP+ ++ G+LL RM D++
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 508 EHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXF 567
+ L +L P + G + LLSN+YA+ G WM V +R +M+ G K G S + F
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453
Query: 568 TVFDHSHPKSDDIYQMIGRLVHDLRQVGYV 597
V D S +S+ IY M+ ++ LR+ GYV
Sbjct: 454 VVGDESQQESERIYAMLDEIMQRLREAGYV 483
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 164/356 (46%), Gaps = 51/356 (14%)
Query: 84 LYNSLIRAHALNGSHPSL--TFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
L+N +IRA N S P S + M+ V PD T+PFLL + P LPL Q H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
A + FG +D FV SL++ YS CG + A R+F +D WNS++ + G
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGD--LRSAQRVFDDSGSKDLPAWNSVVNAYAKAGL 143
Query: 202 LDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM---------LQWNIISWS 252
+D A KLFDEMPER+++SW+ +++GY G+ +A +LF M ++ N + S
Sbjct: 144 IDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMS 203
Query: 253 TMV--CG---------------------------------YSRAGDMDMARMLFDKC-PE 276
T++ CG Y++ G ++ A+ +F+ +
Sbjct: 204 TVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK 263
Query: 277 KNLVLWTTIISGYAEKGFMKEATVLYDKMEEA-GLKPDDGVLISILTACAESGMLGLGKK 335
K++ ++ +I A G E L+ +M + + P+ + IL AC G++ GK
Sbjct: 264 KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKS 323
Query: 336 -IHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHG 390
++ S + +D+Y + G + A + M + D++ W S++ G
Sbjct: 324 YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 22/218 (10%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQV-PYPNVHLYN 86
R L+ K +HA + K H+ D+ + LI ++ C + A VFN + +V Y+
Sbjct: 211 RLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYS 270
Query: 87 SLIRAHALNGSHPSLTFSTFFHM-QREGVYPDNFTYPFLLKACT-------GPSSLPLVQ 138
++I A+ G F F M + + P++ T+ +L AC G S ++
Sbjct: 271 AMICCLAMYGLTDE-CFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMM- 328
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME-ERDAVTWNSMIGGLV 197
+E+FG I ++D Y R G I A ++M E D + W S++ G
Sbjct: 329 -----IEEFGITPSIQHYGCMVDLYGRSG--LIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 198 RGGDL---DGAFKLFDEMPERDMVSWNTMLDGYAKAGE 232
GD+ +GA K E+ + ++ + + YAK G
Sbjct: 382 MLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGR 419
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 296/643 (46%), Gaps = 115/643 (17%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
V Q+HA+++ + D ++A KLI+ ++ A++VF+++ N YN+L+ A+
Sbjct: 41 VLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 95 NGSHPSLTFSTFFHMQREGVY------PDNFTYPFLLKACTGPSSL---PLVQMIHAHVE 145
+ FS F Y PD+ + +LKA +G L + +H V
Sbjct: 101 REMYFD-AFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
+ GF D+FV N +I Y++C +++ A
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCD---------------------------------NIESA 186
Query: 206 FKLFDEMPERDMVSWNTMLDGYAKAG------EMNKA----------------------- 236
K+FDEM ERD+VSWN+M+ GY+++G +M KA
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 237 -------FELFDRMLQWNI---ISWSTMVCG-YSRAGDMDMARMLFDKCPEKNLVLWTTI 285
E+ +M++ +I +S V G Y++ G +D AR LFD+ EK+ V + I
Sbjct: 247 SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAI 306
Query: 286 ISGYAEKGFMKEATVLYDKMEEAGL-------------------------------KPDD 314
ISGY G +KEA L+ +ME GL +P+
Sbjct: 307 ISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNT 366
Query: 315 GVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSK 374
L S+L + S L GK+IHA R + V + ID YAK G L A +F
Sbjct: 367 VTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN 426
Query: 375 MTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDK 434
+ L++W ++I + VHG + A LF M G +PD T +L A H+G D
Sbjct: 427 CK-DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDM 485
Query: 435 GRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGAC 494
++ F+SM Y I P +EHY CM+ +LSR G L +A E + MP++P A V G LL
Sbjct: 486 AQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGA 545
Query: 495 RMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSG 554
+ D+E+AR + LF++ P + GN+++++N+Y QAG W VR +MK G +K G
Sbjct: 546 SVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPG 605
Query: 555 ASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYV 597
S I F D S +S ++Y++I LV + Y+
Sbjct: 606 TSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEYI 648
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 202/471 (42%), Gaps = 55/471 (11%)
Query: 24 CTLHRCSNLD------LVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQV 77
C L S D L +Q+H +++ D++V +I ++ C +I SA VF+++
Sbjct: 134 CVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEM 193
Query: 78 PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
+V +NS+I ++ +GS + P+ T + +AC S L
Sbjct: 194 SERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFG 253
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLV 197
+H + + D+ + N++I Y++CG +D A LF M E+D+VT+ ++I G +
Sbjct: 254 LEVHKKMIENHIQMDLSLCNAVIGFYAKCG--SLDYARALFDEMSEKDSVTYGAIISGYM 311
Query: 198 RGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----------- 246
G + A LF EM + +WN M+ G + + F M++
Sbjct: 312 AHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSS 371
Query: 247 ----------------------------NIISWSTMVCGYSRAGDMDMARMLFDKCPEKN 278
NI ++++ Y++ G + A+ +FD C +++
Sbjct: 372 LLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS 431
Query: 279 LVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA 338
L+ WT II+ YA G A L+D+M+ G KPDD L ++L+A A SG + + I
Sbjct: 432 LIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFD 491
Query: 339 S-VQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQG 397
S + + + + + ++ G L A SKM W ++++G V G
Sbjct: 492 SMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDL 551
Query: 398 EKALELFSSMVHEGFEPD---KYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
E A + EP+ YT + L T AG ++ N M+++
Sbjct: 552 EIARFACDRLFE--MEPENTGNYTIMANL--YTQAGRWEEAEMVRNKMKRI 598
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 37/259 (14%)
Query: 19 LEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP 78
L L +L SNL K+IHA ++ ++YV +I ++ + A VF+
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK 428
Query: 79 YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQ 138
++ + ++I A+A++G S S F MQ G PD+ T +L A
Sbjct: 429 DRSLIAWTAIITAYAVHGDSDSAC-SLFDQMQCLGTKPDDVTLTAVLSA----------- 476
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVR 198
AH + IF +S++ Y GV + M+ L R
Sbjct: 477 --FAHSGDSDMAQHIF--DSMLTKYDIEPGVE-----------------HYACMVSVLSR 515
Query: 199 GGDLDGAFKLFDEMPERDMVS-WNTMLDGYAKAGEMNKAFELFDRMLQW---NIISWSTM 254
G L A + +MP + W +L+G + G++ A DR+ + N +++ M
Sbjct: 516 AGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIM 575
Query: 255 VCGYSRAGDMDMARMLFDK 273
Y++AG + A M+ +K
Sbjct: 576 ANLYTQAGRWEEAEMVRNK 594
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 267/520 (51%), Gaps = 31/520 (5%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
LI+ + + AV +F+++P PNV +N LI GS +L F MQREG+
Sbjct: 179 LISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEF--LVRMQREGLVL 236
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
D F P LKAC+ L + + +H V K G F ++LID YS CG + A
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIY--AAD 294
Query: 177 LFSAMEERDAV-----TWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAG 231
+F +E+ AV WNSM+ G + + + A L ++ + D+ D Y +G
Sbjct: 295 VFH--QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLC-----FDSYTLSG 347
Query: 232 EMNKAFELFDRML-------------QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKN 278
+ + L + + I S +V ++ G++ A LF + P K+
Sbjct: 348 ALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKD 407
Query: 279 LVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA 338
++ ++ +I G + GF A L+ ++ + GL D ++ +IL C+ LG GK+IH
Sbjct: 408 IIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHG 467
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+ + A +DMY KCG +D +F M ++D+VSW +I GFG +G+ E
Sbjct: 468 LCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGML-ERDVVSWTGIIVGFGQNGRVE 526
Query: 399 KALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCM 458
+A F M++ G EP+K TF+GLL AC H+GL+++ R+ +M+ YG+ P +EHY C+
Sbjct: 527 EAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCV 586
Query: 459 IDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDP 518
+DLL + G +EA EL+ MP+EP+ + +LL AC H + L ++E L K P DP
Sbjct: 587 VDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDP 646
Query: 519 GNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
++ LSN YA G W ++ VR K G K SG S I
Sbjct: 647 SVYTSLSNAYATLGMWDQLSKVREAAKKLGA-KESGMSWI 685
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 193/433 (44%), Gaps = 51/433 (11%)
Query: 125 LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYS--RCGGVGIDGAMRLFSAME 182
L+ C + + I AHV K G +++F+ N++I Y R + A ++F M
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRL----LSDAHKVFDEMS 67
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER--------------------------- 215
ER+ VTW +M+ G G + A +L+ M +
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 216 -------------DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAG 262
D+V N+++D Y K G + +A F +L+ + SW+T++ GY +AG
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAG 187
Query: 263 DMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILT 322
MD A LF + P+ N+V W +ISG+ +KG + L +M+ GL D L L
Sbjct: 188 LMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLV-RMQREGLVLDGFALPCGLK 246
Query: 323 ACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF--SKMTGKKD 380
AC+ G+L +GK++H V + S ++A IDMY+ CG L A +F K+
Sbjct: 247 ACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSS 306
Query: 381 LVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFN 440
+ WNSM+ GF ++ + E AL L + D YT G L C + + G +
Sbjct: 307 VAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ-VH 365
Query: 441 SMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDV 500
S+ V G ++DL + G++++A +L +P + I L+ C
Sbjct: 366 SLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFN 424
Query: 501 ELARALSEHLFKL 513
LA L L KL
Sbjct: 425 SLAFYLFRELIKL 437
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 122/564 (21%), Positives = 231/564 (40%), Gaps = 84/564 (14%)
Query: 26 LHRCSNLDLVKQ---IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L C + K+ I A ++K + Q++++A +I+ + R +S A VF+++ N+
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHM-QREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
+ +++ + +G P+ + M E + F Y +LKAC + L +++
Sbjct: 72 VTWTTMVSGYTSDGK-PNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVY 130
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
+ K D+ + NS++D Y + G + A F + + +WN++I G + G
Sbjct: 131 ERIGKENLRGDVVLMNSVVDMYVKNG--RLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 202 LDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM------------------ 243
+D A LF MP+ ++VSWN ++ G+ G +A E RM
Sbjct: 189 MDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKA 247
Query: 244 ---------------------LQWNIISWSTMVCGYSRAGDMDMARMLFDK---CPEKNL 279
L+ + + S ++ YS G + A +F + ++
Sbjct: 248 CSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 280 VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHAS 339
+W +++SG+ + A L ++ ++ L D L L C L LG ++H+
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSL 367
Query: 340 VQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEK 399
V + V + +D++A G + A +F ++ KD+++++ +I G G
Sbjct: 368 VVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSL 426
Query: 400 ALELFSSMVHEGFEPDKYTFIGLLCACT-----------HAGLVDKGRN----------- 437
A LF ++ G + D++ +L C+ H + KG
Sbjct: 427 AFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVD 486
Query: 438 -YFNSMEKVYGIV-------PQIEHYGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIV 486
Y E G+V + + +I + G +EEAF M +EPN +
Sbjct: 487 MYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVT 546
Query: 487 VGTLLGACRMHNDVELARALSEHL 510
LL ACR +E AR+ E +
Sbjct: 547 FLGLLSACRHSGLLEEARSTLETM 570
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 187/458 (40%), Gaps = 83/458 (18%)
Query: 24 CTLHRCSN---LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYP 80
C L CS L + KQ+H ++K+ L + LI +S C + A +VF+Q
Sbjct: 243 CGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLA 302
Query: 81 ---NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
+V ++NS++ +N + + + + + + D++T LK C +L L
Sbjct: 303 VNSSVAVWNSMLSGFLINEENEAALW-LLLQIYQSDLCFDSYTLSGALKICINYVNLRLG 361
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLV 197
+H+ V G+ D V + L+D ++ G I A +LF + +D + ++ +I G V
Sbjct: 362 LQVHSLVVVSGYELDYIVGSILVDLHANVG--NIQDAHKLFHRLPNKDIIAFSGLIRGCV 419
Query: 198 RGGDLDGAFKLFDEMP---------------------------------------ERDMV 218
+ G AF LF E+ E + V
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPV 479
Query: 219 SWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKN 278
+ ++D Y K GE++ LFD ML+ +++SW+ ++
Sbjct: 480 TATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIV---------------------- 517
Query: 279 LVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA 338
G+ + G ++EA + KM G++P+ + +L+AC SG+L +
Sbjct: 518 ---------GFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLE 568
Query: 339 SVQRCRFRCSTKVLNAF--IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQ 396
++ + + + + + +D+ + G A + +KM + D W S++ G H +
Sbjct: 569 TM-KSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTH-K 626
Query: 397 GEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDK 434
+ + + + +GF D + L A G+ D+
Sbjct: 627 NAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQ 664
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 286/610 (46%), Gaps = 84/610 (13%)
Query: 36 KQIHAQLLKAHLHQDLY-VAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
+++H ++ L + + L+ ++ C I+ A VF + + +NS+I
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
NG + M+R + P +FT L +C L Q IH K G ++
Sbjct: 393 NGCFIE-AVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
V N+L+ Y+ G L+ K+F MPE
Sbjct: 452 VSNALMTLYAETGY---------------------------------LNECRKIFSSMPE 478
Query: 215 RDMVSWNTMLDGYAKA--------------------------------------GEMNKA 236
D VSWN+++ A++ GE+ K
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK- 537
Query: 237 FELFDRMLQWNIISWST----MVCGYSRAGDMDMARMLFDKCPEK-NLVLWTTIISGYAE 291
++ L+ NI +T ++ Y + G+MD +F + E+ + V W ++ISGY
Sbjct: 538 -QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
+ +A L M + G + D + ++L+A A L G ++HA R V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
+A +DMY+KCG LD A F+ M ++ SWNSMI G+ HGQGE+AL+LF +M +G
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMP-VRNSYSWNSMISGYARHGQGEEALKLFETMKLDG 715
Query: 412 -FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
PD TF+G+L AC+HAGL+++G +F SM YG+ P+IEH+ CM D+L R G L++
Sbjct: 716 QTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDK 775
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHN--DVELARALSEHLFKLVPSDPGNFSLLSNIY 528
+ + MP++PN ++ T+LGAC N EL + +E LF+L P + N+ LL N+Y
Sbjct: 776 LEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMY 835
Query: 529 AQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLV 588
A G W ++ R +MK+A +K +G S + F D SHP +D IY+ + L
Sbjct: 836 AAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELN 895
Query: 589 HDLRQVGYVP 598
+R GYVP
Sbjct: 896 RKMRDAGYVP 905
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 230/491 (46%), Gaps = 34/491 (6%)
Query: 24 CTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVH 83
C HR + + H++L K L +D+Y+ LI A+ SA VF+++P N
Sbjct: 13 CVGHRGA----ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCV 68
Query: 84 LYNSLIRAHALNGSHP-SLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV--QMI 140
+ ++ ++ NG H +L F M +EG++ + + + +L+AC S+ ++ + I
Sbjct: 69 SWACIVSGYSRNGEHKEALVF--LRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQI 126
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRC-GGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
H + K + D V N LI Y +C G VG A+ F +E +++V+WNS+I +
Sbjct: 127 HGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY--ALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 200 GDLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELFDRM--------LQWN 247
GD AF++F M ++ +++ E + L +++ L +
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPD--VRLLEQIMCTIQKSGLLTD 242
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
+ S +V ++++G + AR +F++ +N V ++ G + + +EAT L+ M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 308 -AGLKPDDGV-LISILT--ACAESGMLGLGKKIHASVQRCRF-RCSTKVLNAFIDMYAKC 362
+ P+ V L+S + AE L G+++H V + N ++MYAKC
Sbjct: 303 MIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKC 362
Query: 363 GCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGL 422
G + A +F MT KD VSWNSMI G +G +A+E + SM P +T I
Sbjct: 363 GSIADARRVFYFMT-DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 423 LCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEP 482
L +C G+ K+ GI + ++ L + G+L E ++ SMP E
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKL-GIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EH 479
Query: 483 NAIVVGTLLGA 493
+ + +++GA
Sbjct: 480 DQVSWNSIIGA 490
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 188/383 (49%), Gaps = 25/383 (6%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLC-RHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
+QIH + K D V+ LI+ + C + A+ F + N +NS+I ++
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQ 183
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLK-ACT-GPSSLPLVQMIHAHVEKFGFYED 152
G S F F MQ +G P +T+ L+ AC+ + L++ I ++K G D
Sbjct: 184 AGDQRS-AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
+FV + L+ ++++ G + A ++F+ ME R+AVT N ++ GLVR + A KLF +M
Sbjct: 243 LFVGSGLVSAFAKSGSLSY--ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Query: 213 -------PERDMVSWNTMLDGYAKAGE--MNKAFELFDRMLQWNIISW-----STMVCGY 258
PE ++ ++ + Y+ A E + K E+ ++ ++ + + +V Y
Sbjct: 301 NSMIDVSPESYVILLSSFPE-YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMY 359
Query: 259 SRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLI 318
++ G + AR +F +K+ V W ++I+G + G EA Y M + P LI
Sbjct: 360 AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLI 419
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
S L++CA LG++IH + + V NA + +YA+ G L+ IFS M +
Sbjct: 420 SSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-E 478
Query: 379 KDLVSWNSMIHGFGVHGQGEKAL 401
D VSWNS+I G + E++L
Sbjct: 479 HDQVSWNSII---GALARSERSL 498
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 123/270 (45%), Gaps = 21/270 (7%)
Query: 238 ELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKE 297
L+ L ++ + ++ Y GD AR +FD+ P +N V W I+SGY+ G KE
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 298 ATVLYDKMEEAGLKPDDGVLISILTACAESGMLGL--GKKIHASVQRCRFRCSTKVLNAF 355
A V M + G+ + +S+L AC E G +G+ G++IH + + + V N
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 356 IDMYAKC-GCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEP 414
I MY KC G + A F + K+ VSWNS+I + G A +FSSM ++G P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIE-VKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 415 DKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDL---------LSRG 465
+YTF L+ T L + + + I+ I+ G + DL ++
Sbjct: 205 TEYTFGSLV--TTACSLTEP------DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKS 256
Query: 466 GHLEEAFELLRSMPVEPNAIVVGTLLGACR 495
G L A ++ M + G ++G R
Sbjct: 257 GSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 15/266 (5%)
Query: 33 DLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHL-YNSLIRA 91
+L KQIH LK ++ + LIA + C + +F+++ ++ +NS+I
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
+ N +F +Q G D+F Y +L A ++L +HA +
Sbjct: 594 YIHNELLAKALDLVWFMLQ-TGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
D+ V ++L+D YS+CG +D A+R F+ M R++ +WNSMI G R G + A KLF+
Sbjct: 653 DVVVGSALVDMYSKCG--RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFET 710
Query: 212 MP-----ERDMVSWNTMLDGYAKAGEMNKAFELFDRM-----LQWNIISWSTMVCGYSRA 261
M D V++ +L + AG + + F+ F+ M L I +S M RA
Sbjct: 711 MKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRA 770
Query: 262 GDMDMARMLFDKCPEK-NLVLWTTII 286
G++D +K P K N+++W T++
Sbjct: 771 GELDKLEDFIEKMPMKPNVLIWRTVL 796
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/410 (22%), Positives = 173/410 (42%), Gaps = 63/410 (15%)
Query: 176 RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNK 235
RL+ ++D N++I + GD A K+FDEMP R+ VSW ++ GY++ GE +
Sbjct: 26 RLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKE 85
Query: 236 AFELFDRMLQWNIISWSTMVCGYSRA---------------------------------- 261
A M++ I S RA
Sbjct: 86 ALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 262 --------GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
G + A F KN V W +IIS Y++ G + A ++ M+ G +P
Sbjct: 146 ISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPT 205
Query: 314 DGVLISIL-TACAESGM-LGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
+ S++ TAC+ + + L ++I ++Q+ V + + +AK G L A +
Sbjct: 206 EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKV 265
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGL 431
F++M ++ V+ N ++ G GE+A +LF M + + +++ LL + L
Sbjct: 266 FNQME-TRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSL 323
Query: 432 VD-----KGRNYFNSMEKVYGIVPQIEHYGC-MIDLLSRGGHLEEAFELLRSM----PVE 481
+ KGR + G+V + G ++++ ++ G + +A + M V
Sbjct: 324 AEEVGLKKGREVHGHVITT-GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVS 382
Query: 482 PNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQA 531
N+++ G C + VE +++ H PG+F+L+S++ + A
Sbjct: 383 WNSMITGLDQNGCFIEA-VERYKSMRRHDIL-----PGSFTLISSLSSCA 426
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 157/379 (41%), Gaps = 58/379 (15%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
++HA ++A L D+ V L+ +S C + A+ FN +P N + +NS+I +A +G
Sbjct: 640 EVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHG 699
Query: 97 SHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
F M+ +G PD+ T+ +L AC+ L E F +E
Sbjct: 700 QGEE-ALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE---------EGFKHFE---- 745
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
S+ DSY G+ + FS M + L R G+LD ++MP +
Sbjct: 746 --SMSDSY------GLAPRIEHFSCMADV-----------LGRAGELDKLEDFIEKMPMK 786
Query: 216 -DMVSWNTMLDGYAKA----GEM-NKAFELFDRMLQWNIISWSTMVCGYSRAG---DMDM 266
+++ W T+L +A E+ KA E+ ++ N +++ + Y+ G D+
Sbjct: 787 PNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVK 846
Query: 267 ARMLFDKCPEKNLV--LWTTIISG----YAEKGFMKEATVLYDKMEE-------AGLKPD 313
AR K W T+ G A +A V+Y K++E AG P
Sbjct: 847 ARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQ 906
Query: 314 DGVLISILTACAESGMLGL-GKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
G + L + +L +K+ + R ST + ++ CG +AF
Sbjct: 907 TGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRV-CGDCHSAFKYI 965
Query: 373 SKMTGKKDLVSWNSMIHGF 391
SK+ G++ ++ ++ H F
Sbjct: 966 SKIEGRQIILRDSNRFHHF 984
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 177/578 (30%), Positives = 281/578 (48%), Gaps = 77/578 (13%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP--YP 80
L L + L+ +Q+HA+++ ++ + L A+ + A + FN++P
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 81 NVHLYNSLIRAHALNGSHP-SLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
N H +N+++ ++ + + S + M+R D+F F +KAC G L +
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
IH K G +D +V SL++ Y++ G
Sbjct: 131 IHGLAMKNGLDKDDYVAPSLVEMYAQLG-------------------------------- 158
Query: 200 GDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELF----DRMLQWNIISWSTMV 255
++ A K+FDE+P R+ V W ++ GY K + + F LF D L + ++ +V
Sbjct: 159 -TMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLV 217
Query: 256 --CGYSRAGD----------------------------------MDMARMLFDKCPEKNL 279
CG AG +D AR LF+ ++N+
Sbjct: 218 KACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNV 277
Query: 280 VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHAS 339
V+WTT+ISG+A+ EA L+ +M + P+ L +IL +C+ G L GK +H
Sbjct: 278 VMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGY 337
Query: 340 VQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEK 399
+ R +FIDMYA+CG + A +F M +++++SW+SMI+ FG++G E+
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMP-ERNVISWSSMINAFGINGLFEE 396
Query: 400 ALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMI 459
AL+ F M + P+ TF+ LL AC+H+G V +G F SM + YG+VP+ EHY CM+
Sbjct: 397 ALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMV 456
Query: 460 DLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPG 519
DLL R G + EA + +MPV+P A G LL ACR+H +V+LA ++E L + P
Sbjct: 457 DLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSS 516
Query: 520 NFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASS 557
+ LLSNIYA AG W V VR +M G +K G S+
Sbjct: 517 VYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSA 554
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/608 (27%), Positives = 301/608 (49%), Gaps = 59/608 (9%)
Query: 36 KQIHAQLL-KAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
+QIH+ ++ ++ L ++V L++ + I A ++F ++ ++ +N +I +A
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYAS 306
Query: 95 NGSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY-ED 152
N F F ++ +G V PD+ T +L C + L + IH+++ + + ED
Sbjct: 307 NCEWFK-AFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLED 365
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGL---------------- 196
V N+LI Y+R G A FS M +D ++WN+++
Sbjct: 366 TSVGNALISFYARFGDTS--AAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHL 423
Query: 197 ------------------------------VRGGDLDGAFKLFDEMPERDMVSWNTMLDG 226
V G + +E P+ N +LD
Sbjct: 424 LNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLG----NALLDA 479
Query: 227 YAKAGEMNKAFELFDRMLQW-NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTI 285
YAK G + A ++F + + ++S+++++ GY +G D A+MLF + +L W+ +
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLM 539
Query: 286 ISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRF 345
+ YAE EA ++ +++ G++P+ ++++L CA+ L L ++ H + R
Sbjct: 540 VRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL 599
Query: 346 RCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFS 405
++ +D+YAKCG L A+ +F + ++DLV + +M+ G+ VHG+G++AL ++S
Sbjct: 600 G-DIRLKGTLLDVYAKCGSLKHAYSVF-QSDARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 406 SMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRG 465
M +PD +L AC HAGL+ G ++S+ V+G+ P +E Y C +DL++RG
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 466 GHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLS 525
G L++A+ + MPVEPNA + GTLL AC +N ++L +++ HL + D GN L+S
Sbjct: 718 GRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLIS 777
Query: 526 NIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIG 585
N+YA W V +R MK +KP+G S + F D SHP+ D I+ ++
Sbjct: 778 NMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVN 837
Query: 586 RLVHDLRQ 593
L +++
Sbjct: 838 ALYLQMKE 845
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/500 (23%), Positives = 230/500 (46%), Gaps = 32/500 (6%)
Query: 53 VAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQRE 112
V+ ++ ++ CR + +F Q+ + ++N ++ +++ ++ F H E
Sbjct: 58 VSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADE 117
Query: 113 GVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGID 172
P + T+ +L C + +H+++ K G +D V N+L+ Y++ G + D
Sbjct: 118 P-KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 173 GAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF----DEMPERDMVSWNTMLDGYA 228
A F + ++D V+WN++I G + AF+ F E E + + +L A
Sbjct: 177 -AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCA 235
Query: 229 --------KAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
++G ++ + LQ ++ +++V Y R G ++ A LF + K+LV
Sbjct: 236 SMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 281 LWTTIISGYAEK-GFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHAS 339
W +I+GYA + K + ++ + + + PD +ISIL CA+ L GK+IH+
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSY 355
Query: 340 VQRCRFRCS-TKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+ R + T V NA I YA+ G AA+ FS M+ KD++SWN+++ F +
Sbjct: 356 ILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS-TKDIISWNAILDAFADSPKQF 414
Query: 399 KALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHY--- 455
+ L L +++E D T + LL C + + K + K G++ E
Sbjct: 415 QFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA-GLLHDEEEPKLG 473
Query: 456 GCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGA---CRMHNDVELARALSEHLF- 511
++D ++ G++E A ++ + + +LL H+D ++ LF
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQM-------LFT 526
Query: 512 KLVPSDPGNFSLLSNIYAQA 531
++ +D +SL+ IYA++
Sbjct: 527 EMSTTDLTTWSLMVRIYAES 546
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/494 (23%), Positives = 210/494 (42%), Gaps = 60/494 (12%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHI-SSAVNVFNQVPYPNVHLYNSLIRAHAL 94
K +H+ ++KA L +D V L++ ++ I A F+ + +V +N++I +
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS---SLPLVQMIHAHVEKFGFYE 151
N F +F M +E P+ T +L C + + IH++V + + +
Sbjct: 202 NNMMAD-AFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 152 D-IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
+FV NSL+ Y R G I+ A LF+ M +D V+WN +I G + AF+LF
Sbjct: 261 THVFVCNSLVSFYLRVGR--IEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 211 EMPER-----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWST-----MVCGYSR 260
+ + D V+ ++L A+ ++ E+ +L+ + + T ++ Y+R
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 261 AGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISI 320
GD A F K+++ W I+ +A+ + L + + D ++S+
Sbjct: 379 FGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSL 438
Query: 321 LTACAESGMLGLGKKIHASVQRCRF---RCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG 377
L C +G K++H + K+ NA +D YAKCG ++ A IF ++
Sbjct: 439 LKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSE 498
Query: 378 KKDLVSWNSMIHGFGVHGQGEKALELFSSMVH---------------------------- 409
++ LVS+NS++ G+ G + A LF+ M
Sbjct: 499 RRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE 558
Query: 410 ---EGFEPDKYTFIGLLCACTHAG---LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLS 463
G P+ T + LL C LV + Y + G + I G ++D+ +
Sbjct: 559 IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYI-----IRGGLGDIRLKGTLLDVYA 613
Query: 464 RGGHLEEAFELLRS 477
+ G L+ A+ + +S
Sbjct: 614 KCGSLKHAYSVFQS 627
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 176/375 (46%), Gaps = 17/375 (4%)
Query: 112 EGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGI 171
G D+ + ++KAC S L + +H V K G V S+++ Y++C +
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRR--M 72
Query: 172 DGAMRLFSAMEERDAVTWNSMIGGLVR--GGDLDGAFKL--FDEMPERDMVSWNTMLDGY 227
D ++F M+ D V WN ++ GL G + FK F + P+ V++ +L
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 228 AKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDM-DMARMLFDKCPEKNLVLW 282
+ G+ + + L+ + + + +V Y++ G + A FD +K++V W
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSW 192
Query: 283 TTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA---ESGMLGLGKKIHA- 338
II+G++E M +A + M + +P+ + ++L CA ++ G++IH+
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSY 252
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
VQR + V N+ + Y + G ++ A +F++M G KDLVSWN +I G+ + +
Sbjct: 253 VVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM-GSKDLVSWNVVIAGYASNCEWF 311
Query: 399 KALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC 457
KA +LF ++VH+G PD T I +L C + G+ + + + ++
Sbjct: 312 KAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNA 371
Query: 458 MIDLLSRGGHLEEAF 472
+I +R G A+
Sbjct: 372 LISFYARFGDTSAAY 386
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 124/296 (41%), Gaps = 47/296 (15%)
Query: 35 VKQIHAQLLKA---HLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHL-YNSLIR 90
VK++H +KA H ++ + L+ A++ C ++ A +F + + YNSL+
Sbjct: 451 VKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLS 510
Query: 91 AHALNGSH------------------------------PSLTFSTFFHMQREGVYPDNFT 120
+ +GSH P+ F +Q G+ P+ T
Sbjct: 511 GYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVT 570
Query: 121 YPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSA 180
LL C +SL LV+ H ++ + G DI + +L+D Y++CG + A +F +
Sbjct: 571 IMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCG--SLKHAYSVFQS 627
Query: 181 MEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKA 236
RD V + +M+ G G A ++ M E D V TML AG +
Sbjct: 628 DARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDG 687
Query: 237 FELFDRM-----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCP-EKNLVLWTTII 286
+++D + ++ + ++ V +R G +D A + P E N +W T++
Sbjct: 688 LQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLL 743
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 37/222 (16%)
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDA 367
+G D V + ++ ACA L G+ +H V + ++V + ++MYAKC +D
Sbjct: 15 SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDD 74
Query: 368 AFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSM-VHEGFEPDKYTFIGLLCAC 426
+F +M D V WN ++ G V G + + F +M + +P TF +L C
Sbjct: 75 CQKMFRQM-DSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLC 132
Query: 427 THAGLVDKGR------------------NYFNSMEKVYGIV-------------PQIEHY 455
G G+ N SM +G + + +
Sbjct: 133 VRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSW 192
Query: 456 GCMIDLLSRGGHLEEAFE---LLRSMPVEPNAIVVGTLLGAC 494
+I S + +AF L+ P EPN + +L C
Sbjct: 193 NAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 276/563 (49%), Gaps = 51/563 (9%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+Q+HA + + L D + PKL+ +S + A + + +N LI ++ N
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
+ S + M +G+ D FTYP ++KAC +++H +E +++V
Sbjct: 163 KRFQE-SVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM--- 212
N+LI Y R G V D A RLF M ERDAV+WN++I L AFKL D M
Sbjct: 222 CNALISMYKRFGKV--DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS 279
Query: 213 -PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI-------------------ISW- 251
E +V+WNT+ G +AG A M N+ + W
Sbjct: 280 GVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG 339
Query: 252 ---------------------STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
++++ YSR D+ A ++F + +L W +IISG+A
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV-QRCRFRCST 349
+E + L +M +G P+ L SIL A G L GK+ H + +R ++
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
+ N+ +DMYAK G + AA +F M K+D V++ S+I G+G G+GE AL F M
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLE 469
G +PD T + +L AC+H+ LV +G F ME V+GI ++EHY CM+DL R G+L+
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 470 EAFELLRSMPVEPNAIVVGTLLGACRMHNDVELAR-ALSEHLFKLVPSDPGNFSLLSNIY 528
+A ++ ++P EP++ + TLL AC +H + + A + L + P G++ LL+++Y
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMY 638
Query: 529 AQAGDWMNVASVRLQMKNAGGQK 551
A G W + +V+ + + G QK
Sbjct: 639 AVTGSWSKLVTVKTLLSDLGVQK 661
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 128/555 (23%), Positives = 212/555 (38%), Gaps = 93/555 (16%)
Query: 63 LCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTY- 121
L R IS + P V L+NS H ++ F TF ++ + + Y
Sbjct: 29 LPRPISETSKTHDDESVPQV-LFNSF--RHCISHGQLYEAFRTFSLLRYQSGSHEFVLYS 85
Query: 122 -PFLLKACTGPSSLPLVQMIHAHVEKFGF-YEDIFVPNSLIDSYSRCGGVGIDGAMRLFS 179
LL C G + Q +HAH G ++ + VP L+ YS +D A +
Sbjct: 86 SASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK-LVTFYSAFN--LLDEAQTITE 142
Query: 180 AMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER------------------------ 215
E + WN +IG +R + ++ M +
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 216 ---------------DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSR 260
++ N ++ Y + G+++ A LFDRM + + +SW+ ++ Y+
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 261 AGDMDMARMLFDKC----PEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
+ A L D+ E ++V W TI G E G A M ++
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA 322
Query: 317 LISILTACAESGMLGLGKKIHASVQR-CRFRCST-KVLNAFIDMYAKCGCLDAAFGIFSK 374
+I+ L AC+ G L GK H V R C F V N+ I MY++C L AF +F +
Sbjct: 323 MINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQ 382
Query: 375 MTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDK 434
+ L +WNS+I GF + + E+ L M+ GF P+ T +L G +
Sbjct: 383 VEA-NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 435 GRNY----------------FNSMEKVYGIVPQI---------------EHYGCMIDLLS 463
G+ + +NS+ +Y +I Y +ID
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 464 RGGHLEEAFELLRSMP---VEPNAIVVGTLLGACRMHNDVELARAL---SEHLFKLVPSD 517
R G E A + M ++P+ + + +L AC N V L EH+F +
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG-IRLR 560
Query: 518 PGNFSLLSNIYAQAG 532
++S + ++Y +AG
Sbjct: 561 LEHYSCMVDLYCRAG 575
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 173/563 (30%), Positives = 276/563 (49%), Gaps = 51/563 (9%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+Q+HA + + L D + PKL+ +S + A + + +N LI ++ N
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
+ S + M +G+ D FTYP ++KAC +++H +E +++V
Sbjct: 163 KRFQE-SVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYV 221
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM--- 212
N+LI Y R G V D A RLF M ERDAV+WN++I L AFKL D M
Sbjct: 222 CNALISMYKRFGKV--DVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLS 279
Query: 213 -PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI-------------------ISW- 251
E +V+WNT+ G +AG A M N+ + W
Sbjct: 280 GVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWG 339
Query: 252 ---------------------STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
++++ YSR D+ A ++F + +L W +IISG+A
Sbjct: 340 KVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFA 399
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV-QRCRFRCST 349
+E + L +M +G P+ L SIL A G L GK+ H + +R ++
Sbjct: 400 YNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCL 459
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
+ N+ +DMYAK G + AA +F M K+D V++ S+I G+G G+GE AL F M
Sbjct: 460 ILWNSLVDMYAKSGEIIAAKRVFDSMR-KRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLE 469
G +PD T + +L AC+H+ LV +G F ME V+GI ++EHY CM+DL R G+L+
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 470 EAFELLRSMPVEPNAIVVGTLLGACRMHNDVELAR-ALSEHLFKLVPSDPGNFSLLSNIY 528
+A ++ ++P EP++ + TLL AC +H + + A + L + P G++ LL+++Y
Sbjct: 579 KARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMY 638
Query: 529 AQAGDWMNVASVRLQMKNAGGQK 551
A G W + +V+ + + G QK
Sbjct: 639 AVTGSWSKLVTVKTLLSDLGVQK 661
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 128/555 (23%), Positives = 212/555 (38%), Gaps = 93/555 (16%)
Query: 63 LCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTY- 121
L R IS + P V L+NS H ++ F TF ++ + + Y
Sbjct: 29 LPRPISETSKTHDDESVPQV-LFNSF--RHCISHGQLYEAFRTFSLLRYQSGSHEFVLYS 85
Query: 122 -PFLLKACTGPSSLPLVQMIHAHVEKFGF-YEDIFVPNSLIDSYSRCGGVGIDGAMRLFS 179
LL C G + Q +HAH G ++ + VP L+ YS +D A +
Sbjct: 86 SASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPK-LVTFYSAFN--LLDEAQTITE 142
Query: 180 AMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER------------------------ 215
E + WN +IG +R + ++ M +
Sbjct: 143 NSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAY 202
Query: 216 ---------------DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSR 260
++ N ++ Y + G+++ A LFDRM + + +SW+ ++ Y+
Sbjct: 203 GRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTS 262
Query: 261 AGDMDMARMLFDKC----PEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
+ A L D+ E ++V W TI G E G A M ++
Sbjct: 263 EEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVA 322
Query: 317 LISILTACAESGMLGLGKKIHASVQR-CRFRCST-KVLNAFIDMYAKCGCLDAAFGIFSK 374
+I+ L AC+ G L GK H V R C F V N+ I MY++C L AF +F +
Sbjct: 323 MINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQ 382
Query: 375 MTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDK 434
+ L +WNS+I GF + + E+ L M+ GF P+ T +L G +
Sbjct: 383 VEA-NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQH 441
Query: 435 GRNY----------------FNSMEKVYGIVPQI---------------EHYGCMIDLLS 463
G+ + +NS+ +Y +I Y +ID
Sbjct: 442 GKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYG 501
Query: 464 RGGHLEEAFELLRSMP---VEPNAIVVGTLLGACRMHNDVELARAL---SEHLFKLVPSD 517
R G E A + M ++P+ + + +L AC N V L EH+F +
Sbjct: 502 RLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG-IRLR 560
Query: 518 PGNFSLLSNIYAQAG 532
++S + ++Y +AG
Sbjct: 561 LEHYSCMVDLYCRAG 575
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/600 (29%), Positives = 283/600 (47%), Gaps = 74/600 (12%)
Query: 38 IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGS 97
+H+ ++K + +V LI A+S+C + SA VF + ++ ++ ++ + NG
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 98 HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPN 157
+ M+ G P+N+T+ LKA G + + +H + K + D V
Sbjct: 228 FED-SLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV-- 284
Query: 158 SLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDM 217
GVG+ ++L++ + GD+ AFK+F+EMP+ D+
Sbjct: 285 ----------GVGL---LQLYTQL------------------GDMSDAFKVFNEMPKNDV 313
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCG---------------- 257
V W+ M+ + + G N+A +LF RM + N + S+++ G
Sbjct: 314 VPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGL 373
Query: 258 -------------------YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEA 298
Y++ MD A LF + KN V W T+I GY G +A
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 299 TVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDM 358
++ + + + S L ACA + LG ++H + V N+ IDM
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDM 493
Query: 359 YAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
YAKCG + A +F++M D+ SWN++I G+ HG G +AL + M +P+ T
Sbjct: 494 YAKCGDIKFAQSVFNEME-TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLT 552
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
F+G+L C++AGL+D+G+ F SM + +GI P +EHY CM+ LL R G L++A +L+ +
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGI 612
Query: 479 PVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVA 538
P EP+ ++ +L A N+ E AR +E + K+ P D + L+SN+YA A W NVA
Sbjct: 613 PYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVA 672
Query: 539 SVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
S+R MK G +K G S I F+V HP I M+ L + GYVP
Sbjct: 673 SIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYVP 732
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 214/466 (45%), Gaps = 23/466 (4%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
K IH +LK DL+ L+ A+ A+N+F+++P N + +L + +A
Sbjct: 69 KAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQ 128
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
+ + REG + + LK + +H+ + K G+ + FV
Sbjct: 129 D-----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFV 183
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
+LI++YS CG V D A +F + +D V W ++ V G + + KL M
Sbjct: 184 GAALINAYSVCGSV--DSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWS---------TMVCGYSRAGDMDM 266
+ N D KA AF+ F + + I+ ++ Y++ GDM
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFD-FAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSD 300
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
A +F++ P+ ++V W+ +I+ + + GF EA L+ +M EA + P++ L SIL CA
Sbjct: 301 AFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAI 360
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS 386
GLG+++H V + F V NA ID+YAKC +D A +F++++ K + VSWN+
Sbjct: 361 GKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNE-VSWNT 419
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
+I G+ G+G KA +F + + TF L AC +D G K
Sbjct: 420 VIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN 479
Query: 447 GIVPQIEHYGCMIDLLSRGGHL---EEAFELLRSMPVEP-NAIVVG 488
++ +ID+ ++ G + + F + ++ V NA++ G
Sbjct: 480 N-AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISG 524
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 179/373 (47%), Gaps = 26/373 (6%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
D K +H Q+LK D V L+ ++ +S A VFN++P +V ++ +I
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
NG + F M+ V P+ FT +L C L + +H V K GF
Sbjct: 323 FCQNG-FCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDL 381
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
DI+V N+LID Y++C +D A++LF+ + ++ V+WN++I G G+ AF +F E
Sbjct: 382 DIYVSNALIDVYAKCE--KMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439
Query: 212 MPERDM----VSWNTMLDGYAKAGEMNKAFELFDRMLQWN----IISWSTMVCGYSRAGD 263
+ V++++ L A M+ ++ ++ N + ++++ Y++ GD
Sbjct: 440 ALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+ A+ +F++ ++ W +ISGY+ G ++A + D M++ KP+ + +L+
Sbjct: 500 IKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSG 559
Query: 324 CAESGMLGLGKKIHASVQR------C--RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM 375
C+ +G++ G++ S+ R C + C ++L + G LD A + +
Sbjct: 560 CSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLL-------GRSGQLDKAMKLIEGI 612
Query: 376 TGKKDLVSWNSMI 388
+ ++ W +M+
Sbjct: 613 PYEPSVMIWRAML 625
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 17/290 (5%)
Query: 9 IPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHIS 68
+P F+ +L C + +CS L +Q+H ++K D+YV+ LI ++ C +
Sbjct: 345 VPNEFTLSSILNG--CAIGKCSGLG--EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Query: 69 SAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKAC 128
+AV +F ++ N +N++I + N FS F R V T+ L AC
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYE-NLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Query: 129 TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVT 188
+S+ L +H K + + V NSLID Y++CG + A +F+ ME D +
Sbjct: 460 ASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKF--AQSVFNEMETIDVAS 517
Query: 189 WNSMIGGLVRGGDLDGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRML 244
WN++I G G A ++ D M +RD +++ +L G + AG +++ E F+ M+
Sbjct: 518 WNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMI 577
Query: 245 QWNIIS-----WSTMVCGYSRAGDMDMARMLFDKCP-EKNLVLWTTIISG 288
+ + I ++ MV R+G +D A L + P E ++++W ++S
Sbjct: 578 RDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/476 (31%), Positives = 253/476 (53%), Gaps = 43/476 (9%)
Query: 163 YSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNT 222
YS+ G A+ ++ M +++ ++ N +I G VR GDL A K+FDEMP+R + +WN
Sbjct: 4 YSKLGD--FPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNA 61
Query: 223 MLDGYAKAGEMNKAFELFDRM--------------------------------------- 243
M+ G + + LF M
Sbjct: 62 MIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG 121
Query: 244 LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYD 303
L+ +++ S++ Y R G + ++ P +NLV W T+I G A+ G + LY
Sbjct: 122 LELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYK 181
Query: 304 KMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
M+ +G +P+ +++L++C++ + G G++IHA + V+++ I MY+KCG
Sbjct: 182 MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCG 241
Query: 364 CLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE-GFEPDKYTFIGL 422
CL A FS+ +D V W+SMI +G HGQG++A+ELF++M + E ++ F+ L
Sbjct: 242 CLGDAAKAFSERE-DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNL 300
Query: 423 LCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEP 482
L AC+H+GL DKG F+ M + YG P ++HY C++DLL R G L++A ++RSMP++
Sbjct: 301 LYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKT 360
Query: 483 NAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRL 542
+ ++ TLL AC +H + E+A+ + + + ++ P+D + LL+N++A A W +V+ VR
Sbjct: 361 DIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK 420
Query: 543 QMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
M++ +K +G S F + D S KS +IY + L +++ GY P
Sbjct: 421 SMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKP 476
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 168/363 (46%), Gaps = 13/363 (3%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
LI + + +A VF+++P + +N++I A + S F M G P
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI-AGLIQFEFNEEGLSLFREMHGLGFSP 89
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
D +T + G S+ + Q IH + K+G D+ V +SL Y R G + DG +
Sbjct: 90 DEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQ-DGEI- 147
Query: 177 LFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGE 232
+ +M R+ V WN++I G + G + L+ M + +++ T+L +
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAI 207
Query: 233 MNKAFELFDRMLQWN----IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISG 288
+ ++ ++ + S+++ YS+ G + A F + +++ V+W+++IS
Sbjct: 208 RGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISA 267
Query: 289 YAEKGFMKEATVLYDKM-EEAGLKPDDGVLISILTACAESGMLGLGKKI-HASVQRCRFR 346
Y G EA L++ M E+ ++ ++ +++L AC+ SG+ G ++ V++ F+
Sbjct: 268 YGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFK 327
Query: 347 CSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSS 406
K +D+ + GCLD A I M K D+V W +++ +H E A +F
Sbjct: 328 PGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKE 387
Query: 407 MVH 409
++
Sbjct: 388 ILQ 390
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 28/320 (8%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+QIH +K L DL V L + + V +P N+ +N+LI +A N
Sbjct: 111 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN 170
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
G P + M+ G P+ T+ +L +C+ + Q IHA K G + V
Sbjct: 171 GC-PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAV 229
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
+SLI YS+CG +G A + FS E+ D V W+SMI G D A +LF+ M E+
Sbjct: 230 VSSLISMYSKCGCLG--DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 287
Query: 216 -----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW-----NIISWSTMVCGYSRAGDMD 265
+ V++ +L + +G +K ELFD M++ + ++ +V RAG +D
Sbjct: 288 TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLD 347
Query: 266 MARMLFDKCPEK-NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
A + P K ++V+W T++S + A ++ ++ + + P+D +L
Sbjct: 348 QAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSACYVLLA-- 403
Query: 325 AESGMLGLGKKIHASVQRCR 344
+HAS +R R
Sbjct: 404 ----------NVHASAKRWR 413
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/370 (36%), Positives = 224/370 (60%), Gaps = 1/370 (0%)
Query: 227 YAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTII 286
YA+ G ++ ++F+ + + + + MV +R GD+ AR LF+ PE++ + W +I
Sbjct: 153 YAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMI 212
Query: 287 SGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFR 346
SGYA+ G +EA ++ M+ G+K + +IS+L+AC + G L G+ H+ ++R + +
Sbjct: 213 SGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIK 272
Query: 347 CSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSS 406
+ ++ +D+YAKCG ++ A +F M +K++ +W+S ++G ++G GEK LELFS
Sbjct: 273 ITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTWSSALNGLAMNGFGEKCLELFSL 331
Query: 407 MVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGG 466
M +G P+ TF+ +L C+ G VD+G+ +F+SM +GI PQ+EHYGC++DL +R G
Sbjct: 332 MKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAG 391
Query: 467 HLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSN 526
LE+A +++ MP++P+A V +LL A RM+ ++EL S+ + +L ++ G + LLSN
Sbjct: 392 RLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSN 451
Query: 527 IYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGR 586
IYA + DW NV+ VR MK+ G +K G S + F V D SHPK I +
Sbjct: 452 IYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKD 511
Query: 587 LVHDLRQVGY 596
+ LR GY
Sbjct: 512 ISRRLRLAGY 521
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 185/401 (46%), Gaps = 49/401 (12%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRH--ISSAVNVFNQVPYPNVHLYNSLIRAH 92
V+QIHA+L +D ++ + A +L H + A + ++ P + NS+IRAH
Sbjct: 22 VRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAH 81
Query: 93 ALNGSHPSLTFSTFFHMQREG--VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY 150
P +F + + G + PDN+T FL++ACTG +H + GF
Sbjct: 82 C-KSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFD 140
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
D V LI Y+ G +D ++F+++ D V +M+ R GD+ A KLF+
Sbjct: 141 NDPHVQTGLISLYAELGC--LDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 211 EMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM--------------------------- 243
MPERD ++WN M+ GYA+ GE +A +F M
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQ 258
Query: 244 -------LQWNIISW-----STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAE 291
++ N I +T+V Y++ GDM+ A +F EKN+ W++ ++G A
Sbjct: 259 GRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAM 318
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
GF ++ L+ M++ G+ P+ +S+L C+ G + G++ H R F ++
Sbjct: 319 NGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQL 377
Query: 352 --LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHG 390
+D+YA+ G L+ A I +M K W+S++H
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHA 418
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 172/555 (30%), Positives = 282/555 (50%), Gaps = 20/555 (3%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
++ A++ I A +F+++P P+ YN+LI +A + F M++ G
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYA-DARETFAAMVLFKRMRKLGFEV 138
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
D FT L+ AC + L++ +H GF V N+ + YS+ GG+ + A+
Sbjct: 139 DGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSK-GGL-LREAVS 194
Query: 177 LFSAMEE-RDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAG 231
+F M+E RD V+WNSMI + + A L+ EM + DM + ++L+
Sbjct: 195 VFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 232 EMNKAFELFDRMLQ----WNIISWSTMVCGYSRAGDMDM---ARMLFDKCPEKNLVLWTT 284
+ + ++++ N S ++ YS+ G D + +F + +LV+W T
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNT 314
Query: 285 IISGYA-EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRC 343
+ISGY+ + +EA + +M+ G +PDD + + +AC+ K+IH +
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS 374
Query: 344 RFRCS-TKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALE 402
+ V NA I +Y K G L A +F +M + + VS+N MI G+ HG G +AL
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGHGTEALL 433
Query: 403 LFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLL 462
L+ M+ G P+K TF+ +L AC H G VD+G+ YFN+M++ + I P+ EHY CMIDLL
Sbjct: 434 LYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLL 493
Query: 463 SRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFS 522
R G LEEA + +MP +P ++ LLGACR H ++ LA + L + P +
Sbjct: 494 GRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYV 553
Query: 523 LLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQ 582
+L+N+YA A W +ASVR M+ +K G S I F D SHP ++ +
Sbjct: 554 MLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNE 613
Query: 583 MIGRLVHDLRQVGYV 597
+ ++ +++VGYV
Sbjct: 614 YLEEMMKKMKKVGYV 628
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 144/283 (50%), Gaps = 7/283 (2%)
Query: 221 NTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
N ++ Y+K G ++ A F + N+ S++ +V Y++ + +AR LFD+ P+ + V
Sbjct: 47 NHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTV 106
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
+ T+ISGYA+ A VL+ +M + G + D L ++ AC + + L K++H
Sbjct: 107 SYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFS 164
Query: 341 QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
F + V NAF+ Y+K G L A +F M +D VSWNSMI +G H +G KA
Sbjct: 165 VSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKA 224
Query: 401 LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC-MI 459
L L+ M+ +GF+ D +T +L A T + GR + + K Q H G +I
Sbjct: 225 LALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIK--AGFHQNSHVGSGLI 282
Query: 460 DLLSRGGHLEEAF--ELLRSMPVEPNAIVVGTLLGACRMHNDV 500
D S+ G + + E + + P+ +V T++ M+ ++
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEEL 325
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 185/420 (44%), Gaps = 46/420 (10%)
Query: 120 TYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFS 179
T+ LL L + +HA K ++ N ++ YS+CG + A F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSY--ARAAFY 67
Query: 180 AMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFEL 239
+ EE + ++N ++ + + A +LFDE+P+ D VS+NT++ GYA A E A L
Sbjct: 68 STEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVL 127
Query: 240 FDRMLQW--------------------NII-------------SWSTM----VCGYSRAG 262
F RM + ++I S+S++ V YS+ G
Sbjct: 128 FKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 263 DMDMARMLFDKCPE-KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL 321
+ A +F E ++ V W ++I Y + +A LY +M G K D L S+L
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 322 TACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG---IFSKMTGK 378
A L G++ H + + F ++ V + ID Y+KCG D + +F ++
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS- 306
Query: 379 KDLVSWNSMIHGFGVHGQ-GEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN 437
DLV WN+MI G+ ++ + E+A++ F M G PD +F+ + AC++ + +
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366
Query: 438 YFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMH 497
K + +I +I L + G+L++A + MP E NA+ ++ H
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCMIKGYAQH 425
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 177/375 (47%), Gaps = 18/375 (4%)
Query: 29 CSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHL-YNS 87
C +DL+KQ+H + V + +S + AV+VF + + +NS
Sbjct: 151 CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNS 210
Query: 88 LIRAHALNGSHP--SLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
+I A+ G H + + + M +G D FT +L A T L + H +
Sbjct: 211 MIVAY---GQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGV-GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL-D 203
K GF+++ V + LID YS+CGG G+ + ++F + D V WN+MI G +L +
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 204 GAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-----WSTM 254
A K F +M D S+ + + ++ ++ ++ +I S + +
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
+ Y ++G++ AR +FD+ PE N V + +I GYA+ G EA +LY +M ++G+ P+
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 315 GVLISILTACAESGMLGLGKKIHASVQRC-RFRCSTKVLNAFIDMYAKCGCLDAAFGIFS 373
+++L+ACA G + G++ +++ + + + ID+ + G L+ A
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507
Query: 374 KMTGKKDLVSWNSMI 388
M K V+W +++
Sbjct: 508 AMPYKPGSVAWAALL 522
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 268 bits (685), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 174/568 (30%), Positives = 280/568 (49%), Gaps = 20/568 (3%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
S++ L KQ+HAQ++K L LIA + +S A VF +P ++ ++S+I
Sbjct: 182 SDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSII 241
Query: 90 RAHALNGSHPSLTFSTFFHMQRE---GVY-PDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
+ G F H++ GV+ P+ + + LKAC+ IH
Sbjct: 242 AGFSQLG----FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCI 297
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
K + SL D Y+RCG ++ A R+F +E D +WN +I GL G D A
Sbjct: 298 KSELAGNAIAGCSLCDMYARCGF--LNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 206 FKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS----WSTMVCG 257
+F +M D +S ++L K +++ ++ +++W ++ ++++
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 258 YSRAGDMDMARMLF-DKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
Y+ D+ LF D + V W TI++ + E L+ M + +PD
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
+ ++L C E L LG ++H + + N IDMYAKCG L A IF M
Sbjct: 476 MGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSM- 534
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
+D+VSW+++I G+ G GE+AL LF M G EP+ TF+G+L AC+H GLV++G
Sbjct: 535 DNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGL 594
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRM 496
+ +M+ +GI P EH C++DLL+R G L EA + M +EP+ +V TLL AC+
Sbjct: 595 KLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKT 654
Query: 497 HNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
+V LA+ +E++ K+ P + LL +++A +G+W N A +R MK +K G S
Sbjct: 655 QGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQS 714
Query: 557 SIXXXXXXXXFTVFDHSHPKSDDIYQMI 584
I F D HP+ DDIY ++
Sbjct: 715 WIEIEDKIHIFFAEDIFHPERDDIYTVL 742
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 214/503 (42%), Gaps = 34/503 (6%)
Query: 4 SAGVRIPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSL 63
S +R+ T+ S +C +L ++IH +L ++ D + +++ +
Sbjct: 62 SFKIRLRTYISL-------ICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGK 114
Query: 64 CRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPF 123
C + A VF+ +P N+ Y S+I ++ NG + M +E + PD F +
Sbjct: 115 CGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAE-AIRLYLKMLQEDLVPDQFAFGS 173
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE 183
++KAC S + L + +HA V K + N+LI Y R + A R+F +
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN--QMSDASRVFYGIPM 231
Query: 184 RDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDR- 242
+D ++W+S+I G L F+ + E M+S+ G KA R
Sbjct: 232 KDLISWSSIIAGF---SQLGFEFEALSHLKE--MLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 243 -------------MLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGY 289
L N I+ ++ Y+R G ++ AR +FD+ + W II+G
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGL 346
Query: 290 AEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCST 349
A G+ EA ++ +M +G PD L S+L A + L G +IH+ + + F
Sbjct: 347 ANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADL 406
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
V N+ + MY C L F +F D VSWN+++ H Q + L LF M+
Sbjct: 407 TVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLV 466
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLE 469
EPD T LL C + G K G+ P+ +ID+ ++ G L
Sbjct: 467 SECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKT-GLAPEQFIKNGLIDMYAKCGSLG 525
Query: 470 EAFELLRSMP----VEPNAIVVG 488
+A + SM V + ++VG
Sbjct: 526 QARRIFDSMDNRDVVSWSTLIVG 548
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 215/458 (46%), Gaps = 26/458 (5%)
Query: 68 SSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNF-TYPFLLK 126
SS V+ N H+ NSL +++ + + F+ Q+ + TY L+
Sbjct: 22 SSVVSTIKTEELMNDHI-NSLCKSNFYREALEAFDFA-----QKNSSFKIRLRTYISLIC 75
Query: 127 ACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDA 186
AC+ SL + IH H+ D + N ++ Y +CG + A +F M ER+
Sbjct: 76 ACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCG--SLRDAREVFDFMPERNL 133
Query: 187 VTWNSMIGGLVRGGDLDGAFKLFDEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDR 242
V++ S+I G + G A +L+ +M + D+V ++ +++ A + ++ +L +
Sbjct: 134 VSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQ 193
Query: 243 MLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEA 298
+++ ++I+ + ++ Y R M A +F P K+L+ W++II+G+++ GF EA
Sbjct: 194 VIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEA 253
Query: 299 TVLYDKMEEAGL-KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFID 357
+M G+ P++ + S L AC+ G +IH + + + D
Sbjct: 254 LSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCD 313
Query: 358 MYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKY 417
MYA+CG L++A +F ++ + D SWN +I G +G ++A+ +FS M GF PD
Sbjct: 314 MYARCGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAI 372
Query: 418 TFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRS 477
+ LLCA T + +G + + K +G + + ++ + + L F L
Sbjct: 373 SLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTMYTFCSDLYCCFNLFED 431
Query: 478 MPVEPNAIVVGTLLGACRMHND-VELARALSEHLFKLV 514
+++ T+L AC H VE+ R LFKL+
Sbjct: 432 FRNNADSVSWNTILTACLQHEQPVEMLR-----LFKLM 464
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 139/315 (44%), Gaps = 20/315 (6%)
Query: 9 IPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHIS 68
IP S R LL C + L QIH+ ++K DL V L+ ++ C +
Sbjct: 368 IPDAISLRSLL----CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLY 423
Query: 69 SAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKAC 128
N+F + + I L P F M PD+ T LL+ C
Sbjct: 424 CCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 129 TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVT 188
SSL L +H + K G + F+ N LID Y++CG +G A R+F +M+ RD V+
Sbjct: 484 VEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLG--QARRIFDSMDNRDVVS 541
Query: 189 WNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRML 244
W+++I G + G + A LF EM E + V++ +L + G + + +L+ M
Sbjct: 542 WSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQ 601
Query: 245 QWNIISWSTMVCG-----YSRAGDMDMARMLFDKCP-EKNLVLWTTIISGYAEKGFMKEA 298
+ IS + C +RAG ++ A D+ E ++V+W T++S +G +
Sbjct: 602 TEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVH-- 659
Query: 299 TVLYDKMEEAGLKPD 313
L K E LK D
Sbjct: 660 --LAQKAAENILKID 672
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 176/584 (30%), Positives = 286/584 (48%), Gaps = 52/584 (8%)
Query: 26 LHRCSNLDLV---KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP-YPN 81
L C++L L+ +QIH +K D+ V L+A ++ C+ IS A +F + N
Sbjct: 132 LRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKN 191
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
+ S++ ++ NG F ++REG + +T+P +L AC S+ + +H
Sbjct: 192 NVTWTSMLTGYSQNG-FAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVH 250
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
+ K GF +I+V ++LID Y++C ++ A L ME D V+WNSMI G VR G
Sbjct: 251 CCIVKSGFKTNIYVQSALIDMYAKCRE--MESARALLEGMEVDDVVSWNSMIVGCVRQGL 308
Query: 202 LDGAFKLFDEMPERDM----VSWNTMLDGYAKA-GEMNKAFELFDRMLQWNIISW----S 252
+ A +F M ERDM + ++L+ +A + EM A +++ ++ +
Sbjct: 309 IGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNN 368
Query: 253 TMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP 312
+V Y++ G MD A +F+ EK+++ WT +++G G EA L+ M G+ P
Sbjct: 369 ALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITP 428
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
D V S+L+A AE +L G+++H + + F S V N+ + MY KCG L+ A IF
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIF 488
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
+ M +DL++W +I G+ +G L+
Sbjct: 489 NSME-IRDLITWTCLIVGYAKNG-----------------------------------LL 512
Query: 433 DKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLG 492
+ + YF+SM VYGI P EHY CMIDL R G + +LL M VEP+A V +L
Sbjct: 513 EDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILA 572
Query: 493 ACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKP 552
A R H ++E ++ L +L P++ + LSN+Y+ AG A+VR MK+ K
Sbjct: 573 ASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKE 632
Query: 553 SGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGY 596
G S + F D HP+ +IY + ++ +++ GY
Sbjct: 633 PGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEAGY 676
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 146/281 (51%), Gaps = 5/281 (1%)
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDK 273
+R + N +L +K+G +++A ++FD+M + + +W+TM+ YS + + A LF
Sbjct: 25 DRTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRS 84
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
P KN + W +ISGY + G EA L+ +M+ G+KP++ L S+L C +L G
Sbjct: 85 NPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGV 393
++IH + F V+N + MYA+C + A +F M G+K+ V+W SM+ G+
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 394 HGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIE 453
+G KA+E F + EG + ++YTF +L AC G + K G I
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK-SGFKTNIY 263
Query: 454 HYGCMIDLLSRGGHLEEAFELLRSMPVEP----NAIVVGTL 490
+ID+ ++ +E A LL M V+ N+++VG +
Sbjct: 264 VQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCV 304
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 185/433 (42%), Gaps = 82/433 (18%)
Query: 135 PLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIG 194
P IH++ ++ + N L+ S+ G V D A ++F M ERD TWN+MI
Sbjct: 15 PFGSCIHSYADRTKLH-----SNLLLGDLSKSGRV--DEARQMFDKMPERDEFTWNTMIV 67
Query: 195 GLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM----------- 243
L A KLF P ++ +SWN ++ GY K+G +AF LF M
Sbjct: 68 AYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYT 127
Query: 244 --------------LQWNIISWSTMVCG--------------YSRAGDMDMARMLFDKCP 275
L+ I T+ G Y++ + A LF+
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 276 -EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGK 334
EKN V WT++++GY++ GF +A + + G + + S+LTACA +G
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 335 KIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVH 394
++H + + F+ + V +A IDMYAKC +++A + M D+VSWNSMI G
Sbjct: 248 QVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGME-VDDVVSWNSMIVGCVRQ 306
Query: 395 GQGEKALELFSSMVHEGFEPDKYTFIGLL------------CACTHAGLVDKG------- 435
G +AL +F M + D +T +L + H +V G
Sbjct: 307 GLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLV 366
Query: 436 ----------RNYFNSMEKVY-GIVPQ-IEHYGCMIDLLSRGGHLEEAFELLRSMPV--- 480
R +S KV+ G++ + + + ++ + G +EA +L +M V
Sbjct: 367 NNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGI 426
Query: 481 EPNAIVVGTLLGA 493
P+ IV ++L A
Sbjct: 427 TPDKIVTASVLSA 439
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/573 (28%), Positives = 286/573 (49%), Gaps = 12/573 (2%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
L+ K IH+ ++ + ++ + L+ +S + AV V N +V L+ S++
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
N TF M+ G+ P+NFTY +L C+ SL + IH+ K GF +
Sbjct: 300 FVRN-LRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
V N+L+D Y +C ++ A R+F AM + V+W ++I GLV G + F L E
Sbjct: 359 STDVGNALVDMYMKCSASEVE-ASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLME 417
Query: 212 MPERDM----VSWNTMLDGYAKAGEMNKAFE----LFDRMLQWNIISWSTMVCGYSRAGD 263
M +R++ V+ + +L +K + + E L R + ++ +++V Y+ +
Sbjct: 418 MVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRK 477
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+D A + ++ + +T++++ + E G + A + + M G++ D L ++A
Sbjct: 478 VDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISA 537
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
A G L GK +H + F + VLN+ +DMY+KCG L+ A +F ++ D+VS
Sbjct: 538 SANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEI-ATPDVVS 596
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
WN ++ G +G AL F M + EPD TF+ LL AC++ L D G YF M+
Sbjct: 597 WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMK 656
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
K+Y I PQ+EHY ++ +L R G LEEA ++ +M ++PNA++ TLL ACR ++ L
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 504 RALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXX 563
++ L PSDP + LL+++Y ++G R M K G S++
Sbjct: 717 EDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGK 776
Query: 564 XXXFTVFDHSH-PKSDDIYQMIGRLVHDLRQVG 595
F D + K++ IY I + ++++ G
Sbjct: 777 VHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFG 809
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/399 (27%), Positives = 193/399 (48%), Gaps = 12/399 (3%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
IH ++K L ++L + L++ + I +A +F+++ + V + +I A +
Sbjct: 44 HIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQ 103
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
S S F M G +P+ FT+ ++++C G + +H V K GF + V
Sbjct: 104 EFAS-ALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVG 162
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER- 215
+SL D YS+CG A LFS+++ D ++W MI LV A + + EM +
Sbjct: 163 SSLSDLYSKCG--QFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 216 ---DMVSWNTMLDGYAKAG-EMNKAF--ELFDRMLQWNIISWSTMVCGYSRAGDMDMARM 269
+ ++ +L + G E K + R + N++ +++V YS+ M+ A
Sbjct: 221 VPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVR 280
Query: 270 LFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGM 329
+ + E+++ LWT+++SG+ KEA + +M GL+P++ +IL+ C+
Sbjct: 281 VLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRS 340
Query: 330 LGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDA-AFGIFSKMTGKKDLVSWNSMI 388
L GK+IH+ + F ST V NA +DMY KC + A +F M ++VSW ++I
Sbjct: 341 LDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVS-PNVVSWTTLI 399
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
G HG + L MV EP+ T G+L AC+
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 109/211 (51%), Gaps = 3/211 (1%)
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
AR LFD+ + + WT +IS + + A L+++M +G P++ S++ +CA
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS 386
+ G ++H SV + F ++ V ++ D+Y+KCG A +FS + D +SW
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQ-NADTISWTM 195
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
MI + +AL+ +S MV G P+++TF+ LL A + GL + G+ +++ V
Sbjct: 196 MISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNI-IVR 253
Query: 447 GIVPQIEHYGCMIDLLSRGGHLEEAFELLRS 477
GI + ++D S+ +E+A +L S
Sbjct: 254 GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS 284
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 179/421 (42%), Gaps = 37/421 (8%)
Query: 10 PTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHIS- 68
P F+ +L LC+ R +LD KQIH+Q +K V L+ + C
Sbjct: 323 PNNFTYSAIL--SLCSAVR--SLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEV 378
Query: 69 SAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKAC 128
A VF + PNV + +LI +G F M + V P+ T +L+AC
Sbjct: 379 EASRVFGAMVSPNVVSWTTLILGLVDHG-FVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 129 TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVT 188
+ + V IHA++ + ++ V NSL+D+Y+ V D A + +M+ RD +T
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKV--DYAWNVIRSMKRRDNIT 495
Query: 189 WNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI 248
+ S++ G + A + + M + L G+ A A E + +++
Sbjct: 496 YTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSV 555
Query: 249 IS--------WSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATV 300
S +++V YS+ G ++ A+ +F++ ++V W ++SG A GF+ A
Sbjct: 556 KSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALS 615
Query: 301 LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNA------ 354
+++M +PD + +L+AC+ + LG + F+ K+ N
Sbjct: 616 AFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEY--------FQVMKKIYNIEPQVEH 667
Query: 355 ---FIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
+ + + G L+ A G+ M K + + + +++ G L L M ++G
Sbjct: 668 YVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGN----LSLGEDMANKG 723
Query: 412 F 412
Sbjct: 724 L 724
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/491 (32%), Positives = 269/491 (54%), Gaps = 14/491 (2%)
Query: 119 FTYPFLLKACTGPSSLP-LVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRL 177
T L + SS P ++ IHA V + GF E + L+++ G + A ++
Sbjct: 8 LTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCY--ARQV 65
Query: 178 FSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEM 233
F M + WN++ G VR + L+ +M + D ++ ++ ++ G+
Sbjct: 66 FDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDF 125
Query: 234 NKAFELFDRMLQWNI----ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGY 289
+ F L ++++ I + +V Y + G++ A LF+ K+LV W ++
Sbjct: 126 SCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVC 185
Query: 290 AEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCST 349
+ G A ++KM ++ D ++S+L+AC + G L +G++I+ ++ C+
Sbjct: 186 VQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNI 245
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
V NA +DM+ KCG +AA +F +M ++++VSW++MI G+ ++G +AL LF++M +
Sbjct: 246 IVENARLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMIVGYAMNGDSREALTLFTTMQN 304
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV--YGIVPQIEHYGCMIDLLSRGGH 467
EG P+ TF+G+L AC+HAGLV++G+ YF+ M + + P+ EHY CM+DLL R G
Sbjct: 305 EGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGL 364
Query: 468 LEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNI 527
LEEA+E ++ MPVEP+ + G LLGAC +H D+ L + +++ L + P LLSNI
Sbjct: 365 LEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNI 424
Query: 528 YAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRL 587
YA AG W V VR +M+ G +K + SS+ F D SHP+S IY+ + +
Sbjct: 425 YAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEI 484
Query: 588 VHDLRQVGYVP 598
+ +R++GYVP
Sbjct: 485 LKKIRKMGYVP 495
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 237/525 (45%), Gaps = 57/525 (10%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
+K+IHA +L+ + + +L+ + + A VF+++ P + L+N+L + +
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVR 86
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
N P + + M+ GV PD FTYPF++KA + +HAHV K+GF
Sbjct: 87 N-QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM-- 212
V L+ Y + G + A LF +M+ +D V WN+ + V+ G+ A + F++M
Sbjct: 146 VATELVMMYMKFG--ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 213 --PERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDM 266
+ D + +ML + G + E++DR + NII + + + + G+ +
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
AR+LF++ ++N+V W+T+I GYA G +EA L+ M+ GL+P+ + +L+AC+
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 327 SGMLGLGKKIHASVQRC---RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
+G++ GK+ + + + + +D+ + G L+ A+ KM + D
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 384 WNSMIHGFGVHGQ---GEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG----LVDKGR 436
W +++ VH G+K ++ PD ++ LL A VDK R
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETA-----PDIGSYHVLLSNIYAAAGKWDCVDKVR 438
Query: 437 NYFNSM-EKVYGIVPQIEHYGCMIDLLSRGG-----------HLEEAFELLRSMPVEPNA 484
+ + K +E G I +RG L+E + +R M P+
Sbjct: 439 SKMRKLGTKKVAAYSSVEFEG-KIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPD- 496
Query: 485 IVVGTLLGACRMHNDVELAR---ALSEH------LFKLVPSDPGN 520
C + +DVE+ +LS H F L+ PG+
Sbjct: 497 --------TCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGH 533
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 272/529 (51%), Gaps = 56/529 (10%)
Query: 123 FLLKACTGPSSLPLVQMIHAHVEKFGFYE--DIFVPNSLIDSYSRCGGVGIDGAMRLFSA 180
LL+ C S L + +HA + G + ++ N+L Y+ G + A +LF
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVT--AQKLFDE 68
Query: 181 --MEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVS--------------- 219
+ E+D V W +++ R G L + KLF EM + D VS
Sbjct: 69 IPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLG 128
Query: 220 --------------------WNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYS 259
N ++D Y K G +++ +F+ + + +++SW+ ++
Sbjct: 129 FAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVV 188
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME-EAGLKPDDGVLI 318
+ ++ R +F + PE+N V WT +++GY GF +E L +M G + L
Sbjct: 189 KWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLC 248
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTK-------VLNAFIDMYAKCGCLDAAFGI 371
S+L+ACA+SG L +G+ +H + + V A +DMYAKCG +D++ +
Sbjct: 249 SMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNV 308
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGL 431
F ++ K+++V+WN++ G +HG+G +++F M+ E +PD TF +L AC+H+G+
Sbjct: 309 F-RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGI 366
Query: 432 VDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLL 491
VD+G F+S+ + YG+ P+++HY CM+DLL R G +EEA L+R MPV PN +V+G+LL
Sbjct: 367 VDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLL 425
Query: 492 GACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQK 551
G+C +H VE+A + L ++ P + L+SN+Y G +R ++ G +K
Sbjct: 426 GSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRK 485
Query: 552 PSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGI 600
G SSI F+ D SHP++ +IY + ++ +R GYVP +
Sbjct: 486 IPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDV 534
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 183/426 (42%), Gaps = 57/426 (13%)
Query: 36 KQIHAQLLKAHLHQ--DLYVAPKLIAAFSLCRHISSAVNVFNQVPYP---NVHLYNSLIR 90
K++HA L + L + Y++ L ++ + +A +F+++P NV + +L+
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVD-WTTLLS 84
Query: 91 AHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY 150
+ + G + + F M+R+ V D+ + L C L Q H K G
Sbjct: 85 SFSRYGLLVN-SMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL 143
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
+ V N+L+D Y +CG V R+F +EE+ V+W ++ +V+ L+ ++F
Sbjct: 144 TSVKVCNALMDMYGKCGLV--SEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFH 201
Query: 211 EMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML-------------------------- 244
EMPER+ V+W M+ GY AG + EL M+
Sbjct: 202 EMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLV 261
Query: 245 --QW-------------------NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWT 283
+W +++ + +V Y++ G++D + +F ++N+V W
Sbjct: 262 VGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWN 321
Query: 284 TIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRC 343
+ SG A G + ++ +M +KPDD ++L+AC+ SG++ G + S++
Sbjct: 322 ALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFY 380
Query: 344 RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALEL 403
+D+ + G ++ A + +M + V S++ VHG+ E A +
Sbjct: 381 GLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERI 440
Query: 404 FSSMVH 409
++
Sbjct: 441 KRELIQ 446
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/543 (31%), Positives = 285/543 (52%), Gaps = 35/543 (6%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q+H LKA D V+ LI+ ++ + VF+++ + + Y S+I + +G
Sbjct: 68 QLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDG 127
Query: 97 ---SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTG-PSSLPLVQMIHAHV---EKFGF 149
L +F+ G P + LL CT SS + +M HA V E+
Sbjct: 128 LLYEAMKLIKEMYFY----GFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQ- 182
Query: 150 YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
E + + +L+D Y + A +F ME ++ V+W +MI G V + + LF
Sbjct: 183 -ESVLLSTALVDMYLKFDDHA--AAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLF 239
Query: 210 DEMPERDMVSWN--TMLDGYAKAGEMNKAFELFDRMLQWNI-----------ISWSTMVC 256
M +R+ + N T+L E+N L + ++ ++ TM C
Sbjct: 240 RAM-QRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 257 GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
R G++ ++R+LF+ +++V+W+++ISGYAE G E L ++M + G++ +
Sbjct: 299 ---RCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVT 355
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
L++I++AC S +L +H+ + +C F + NA IDMYAKCG L AA +F ++T
Sbjct: 356 LLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT 415
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
+KDLVSW+SMI+ +G+HG G +ALE+F M+ G E D F+ +L AC HAGLV++ +
Sbjct: 416 -EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQ 474
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRM 496
F K Y + +EHY C I+LL R G +++AFE+ +MP++P+A + +LL AC
Sbjct: 475 TIFTQAGK-YHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACET 533
Query: 497 HNDVELA-RALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGA 555
H +++A + ++ L K P +P N+ LLS I+ ++G++ VR M+ K G
Sbjct: 534 HGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGF 593
Query: 556 SSI 558
S I
Sbjct: 594 SKI 596
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 150/320 (46%), Gaps = 16/320 (5%)
Query: 34 LVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHA 93
LVK+IH + H D + + + C ++S + +F +V +++S+I +A
Sbjct: 270 LVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYA 329
Query: 94 LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
G S + M++EG+ ++ T ++ ACT + L +H+ + K GF I
Sbjct: 330 ETGD-CSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHI 388
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM- 212
+ N+LID Y++CG + A +F + E+D V+W+SMI G A ++F M
Sbjct: 389 LLGNALIDMYAKCG--SLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMI 446
Query: 213 ---PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI-ISWSTMVCGYS---RAGDMD 265
E D +++ +L AG + +A +F + ++++ ++ C + R G +D
Sbjct: 447 KGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGKID 506
Query: 266 MARMLFDKCPEK-NLVLWTTIISGYAEKGFMKEA--TVLYDKMEEAGLKPDDGVLISILT 322
A + P K + +W++++S G + A + + M+ P + VL+S +
Sbjct: 507 DAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIH 566
Query: 323 ACAESGMLGLGKKIHASVQR 342
ESG +++ +QR
Sbjct: 567 --TESGNYHAAEEVRRVMQR 584
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 102/247 (41%), Gaps = 14/247 (5%)
Query: 286 ISGYAEKGFMKEATVLYD-KMEEAGLKPDDGVLISILTACA-ESGMLGLGKKIHASVQRC 343
+ G F EA LY K+ G +L S++ ACA + LG ++H +
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 344 RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALEL 403
C T V N+ I MYAK A +F +M +D VS+ S+I+ G +A++L
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEML-HRDTVSYCSIINSCCQDGLLYEAMKL 135
Query: 404 FSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV-YGIVPQIEHYGCMIDLL 462
M GF P LL CT G K F+++ V + + ++D+
Sbjct: 136 IKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMY 195
Query: 463 SRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHND----VELARALSEHLFKLVPSDP 518
+ AF + M V+ N + ++ C + + V+L RA+ + P
Sbjct: 196 LKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR-----P 249
Query: 519 GNFSLLS 525
+LLS
Sbjct: 250 NRVTLLS 256
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 7/191 (3%)
Query: 23 LCTLHRCSN---LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY 79
L + C+N L +H+Q+LK + + LI ++ C +S+A VF ++
Sbjct: 357 LAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTE 416
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
++ ++S+I A+ L+G H S F M + G D+ + +L AC + Q
Sbjct: 417 KDLVSWSSMINAYGLHG-HGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQT 475
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER-DAVTWNSMIGGLVR 198
I K+ + I+ R G ID A + M + A W+S++
Sbjct: 476 IFTQAGKYHMPVTLEHYACYINLLGRFG--KIDDAFEVTINMPMKPSARIWSSLLSACET 533
Query: 199 GGDLDGAFKLF 209
G LD A K+
Sbjct: 534 HGRLDVAGKII 544
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/461 (32%), Positives = 252/461 (54%), Gaps = 17/461 (3%)
Query: 108 HMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCG 167
H+ R ++ N + C S+ + +H++ ++ V N++I YS G
Sbjct: 26 HLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQN----PNVLVFNAMIKCYSLVG 81
Query: 168 GVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTM 223
++ FS+M+ R D T+ ++ DL + E+ +
Sbjct: 82 PP--LESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKI 139
Query: 224 LDG----YAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL 279
G Y G M A ++FD M + N++ W+ M+ G+ +GD++ LF + E+++
Sbjct: 140 RIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI 199
Query: 280 VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHAS 339
V W ++IS ++ G +EA L+ +M + G PD+ ++++L A G+L GK IH++
Sbjct: 200 VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHST 259
Query: 340 VQRC-RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+ F+ V NA +D Y K G L+AA IF KM ++++VSWN++I G V+G+GE
Sbjct: 260 AESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGE 318
Query: 399 KALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC 457
++LF +M+ EG P++ TF+G+L C++ G V++G F M + + + + EHYG
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 458 MIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSD 517
M+DL+SR G + EAF+ L++MPV NA + G+LL ACR H DV+LA + L K+ P +
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGN 438
Query: 518 PGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
GN+ LLSN+YA+ G W +V VR MK +K +G S+I
Sbjct: 439 SGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 203/424 (47%), Gaps = 54/424 (12%)
Query: 19 LEEKLCTL-HRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAF-SLCRHISS---AVNV 73
+E KL L H + + +IHA LL+ LH + L+A F S+C +S+ A V
Sbjct: 3 IERKLLRLLHGHNTRTRLPEIHAHLLRHFLHG----SNLLLAHFISICGSLSNSDYANRV 58
Query: 74 FNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSS 133
F+ + PNV ++N++I+ ++L G P + S F M+ G++ D +TY LLK+C+ S
Sbjct: 59 FSHIQNPNVLVFNAMIKCYSLVGP-PLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSD 117
Query: 134 LPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMI 193
L + +H + + GF+ + +++ Y+ G +G A ++F M ER+ V WN MI
Sbjct: 118 LRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMG--DAQKVFDEMSERNVVVWNLMI 175
Query: 194 GGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML--------- 244
G GD++ LF +M ER +VSWN+M+ +K G +A ELF M+
Sbjct: 176 RGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEA 235
Query: 245 ------------------QWN-------------IISWSTMVCGYSRAGDMDMARMLFDK 273
+W I + +V Y ++GD++ A +F K
Sbjct: 236 TVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRK 295
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKM-EEAGLKPDDGVLISILTACAESGMLGL 332
+N+V W T+ISG A G + L+D M EE + P++ + +L C+ +G +
Sbjct: 296 MQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVER 355
Query: 333 GKKIHA-SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGF 391
G+++ ++R + T+ A +D+ ++ G + AF M + W S++
Sbjct: 356 GEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSAC 415
Query: 392 GVHG 395
HG
Sbjct: 416 RSHG 419
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 281/563 (49%), Gaps = 24/563 (4%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q+ + ++K L DL V I +S A VF+++ + ++ +NSL+ + G
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
+ F M REGV D+ ++ ++ C + L L + IH K G+ + V
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP--- 213
N L+ YS+CG ++ +F M ER+ V+W +MI + D A +F M
Sbjct: 315 NILMSRYSKCGV--LEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDG 367
Query: 214 -ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS----WSTMVCGYSRAGDMDMAR 268
+ V++ +++ ++ + ++ ++ +S ++ + Y++ ++ A+
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAK 427
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA--E 326
F+ + ++ W +ISG+A+ GF EA ++ A P++ S+L A A E
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAE 486
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS 386
+ G++ HA + + V +A +DMYAK G +D + +F++M+ K V W S
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFV-WTS 545
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
+I + HG E + LF M+ E PD TF+ +L AC G+VDKG FN M +VY
Sbjct: 546 IISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVY 605
Query: 447 GIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARAL 506
+ P EHY CM+D+L R G L+EA EL+ +P P ++ ++LG+CR+H +V++ +
Sbjct: 606 NLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKV 665
Query: 507 SEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXX-----X 561
+E ++ P G++ + NIYA+ +W A +R M+ K +G S I
Sbjct: 666 AELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGS 725
Query: 562 XXXXXFTVFDHSHPKSDDIYQMI 584
F+ D SHPKSD+IY+M+
Sbjct: 726 LTMQGFSSGDKSHPKSDEIYRMV 748
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 131/515 (25%), Positives = 238/515 (46%), Gaps = 38/515 (7%)
Query: 16 RRLLEEKLCTLHRCSNLDLVK--QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNV 73
R + E LC + DL + QIH + + V+ ++ + +A+ +
Sbjct: 74 RHMDEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCI 133
Query: 74 FNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSS 133
F + P+V +N+++ + + +L F M+ GV D FTY L C G
Sbjct: 134 FENLVDPDVVSWNTILSG--FDDNQIALNF--VVRMKSAGVVFDAFTYSTALSFCVGSEG 189
Query: 134 LPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMI 193
L + + V K G D+ V NS I YSR G GA R+F M +D ++WNS++
Sbjct: 190 FLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSG--SFRGARRVFDEMSFKDMISWNSLL 247
Query: 194 GGLVRGGDLD-GAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFEL--------F 240
GL + G A +F +M E D VS+ +++ ++ A ++ +
Sbjct: 248 SGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY 307
Query: 241 DRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATV 300
+ +L+ I ++ YS+ G ++ + +F + E+N+V WTT+IS + +A
Sbjct: 308 ESLLEVGNI----LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKD-----DAVS 358
Query: 301 LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYA 360
++ M G+ P++ + ++ A + + G KIH + F V N+FI +YA
Sbjct: 359 IFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYA 418
Query: 361 KCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFI 420
K L+ A F +T ++++SWN+MI GF +G +AL++F S E P++YTF
Sbjct: 419 KFEALEDAKKAFEDITF-REIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFG 476
Query: 421 GLLCACTHAG--LVDKGRNYFNSMEKV-YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRS 477
+L A A V +G+ + K+ P + ++D+ ++ G+++E+ ++
Sbjct: 477 SVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNE 534
Query: 478 MPVEPNAIVVGTLLGACRMHNDVELARALSEHLFK 512
M + N V +++ A H D E L + K
Sbjct: 535 MS-QKNQFVWTSIISAYSSHGDFETVMNLFHKMIK 568
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/582 (28%), Positives = 289/582 (49%), Gaps = 15/582 (2%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
R + L K +H +K L ++L + L+ +S C I++A +F NV +N+
Sbjct: 304 REREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNT 363
Query: 88 LIRAHALNGSHPSLTFSTFFHMQR--EGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
++ + G TF M E V D T + C S LP ++ +H +
Sbjct: 364 MVGGFSAEGDTHG-TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD---- 201
K F + V N+ + SY++CG + A R+F + + +WN++IGG + D
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSY--AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 202 LDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFE----LFDRMLQWNIISWSTMVCG 257
LD ++ D + ++L +K + E + L+ ++ + +++
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
Y G++ + LFD +K+LV W T+I+GY + GF A ++ +M G++ +
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600
Query: 318 ISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG 377
+ + AC+ L LG++ HA + + + IDMYAK G + + +F+ +
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK- 659
Query: 378 KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN 437
+K SWN+MI G+G+HG ++A++LF M G PD TF+G+L AC H+GL+ +G
Sbjct: 660 EKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLR 719
Query: 438 YFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL-RSMPVEPNAIVVGTLLGACRM 496
Y + M+ +G+ P ++HY C+ID+L R G L++A ++ M E + + +LL +CR+
Sbjct: 720 YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRI 779
Query: 497 HNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
H ++E+ ++ LF+L P P N+ LLSN+YA G W +V VR +M +K +G S
Sbjct: 780 HQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCS 839
Query: 557 SIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
I F V + ++I + L + ++GY P
Sbjct: 840 WIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRP 881
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/418 (28%), Positives = 202/418 (48%), Gaps = 30/418 (7%)
Query: 31 NLDLVKQIHAQLLK--AHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSL 88
++++ ++IH QL+ L D + ++I +++C + VF+ + N+ +N++
Sbjct: 99 DIEMGRKIH-QLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAV 157
Query: 89 IRAHALNGSHPSLTFSTFFHM-QREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
I +++ N + + TF M + PD+FTYP ++KAC G S + + +H V K
Sbjct: 158 ISSYSRNELYDEV-LETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
G ED+FV N+L+ Y G V A++LF M ER+ V+WNSMI G + +F
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFV--TDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFL 274
Query: 208 LFDEMPER--------DMVSWNTMLDGYAKAGEMNK-------AFEL-FDRMLQWNIISW 251
L EM E D+ + T+L A+ E+ A +L D+ L N
Sbjct: 275 LLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN---- 330
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG-- 309
+ ++ YS+ G + A+M+F KN+V W T++ G++ +G + +M G
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
+K D+ +++ + C L K++H + F + V NAF+ YAKCG L A
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 370 GIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
+F + K + SWN++I G +L+ M G PD +T LL AC+
Sbjct: 451 RVFHGIRSKT-VNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/552 (23%), Positives = 247/552 (44%), Gaps = 32/552 (5%)
Query: 24 CTLHRCSNLDLVK---QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYP 80
C + C+ + V +H ++K L +D++V L++ + ++ A+ +F+ +P
Sbjct: 192 CVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER 251
Query: 81 NVHLYNSLIRAHALNG--SHPSLTFSTFFHMQREGVY-PDNFTYPFLLKACTGPSSLPLV 137
N+ +NS+IR + NG L +G + PD T +L C + L
Sbjct: 252 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 311
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLV 197
+ +H K +++ + N+L+D YS+CG I A +F ++ V+WN+M+GG
Sbjct: 312 KGVHGWAVKLRLDKELVLNNALMDMYSKCG--CITNAQMIFKMNNNKNVVSWNTMVGGFS 369
Query: 198 RGGDLDGAFKLFDEM------PERDMVSWNTMLDGYAKAGEMNKAFEL----FDRMLQWN 247
GD G F + +M + D V+ + + EL + +N
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
+ + V Y++ G + A+ +F K + W +I G+A+ + + + +M+
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDA 367
+GL PD + S+L+AC++ L LGK++H + R V + + +Y CG L
Sbjct: 490 SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCT 549
Query: 368 AFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
+F M K LVSWN++I G+ +G ++AL +F MV G + + + + AC+
Sbjct: 550 VQALFDAME-DKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Query: 428 HAGLVDKGRNYFNSMEKVYGIVPQIEH---YGC-MIDLLSRGGHLEEAFELLRSMPVEPN 483
+ GR Y + +E C +ID+ ++ G + ++ ++ + +
Sbjct: 609 LLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKST 663
Query: 484 AIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRL- 542
A ++G +H + A L E + + +P + + L + A + +R
Sbjct: 664 ASWNAMIMGY-GIHGLAKEAIKLFEEMQR-TGHNPDDLTFLGVLTACNHSGLIHEGLRYL 721
Query: 543 -QMKNAGGQKPS 553
QMK++ G KP+
Sbjct: 722 DQMKSSFGLKPN 733
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 178/375 (47%), Gaps = 36/375 (9%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L + +L L K++H +++ L +DL+V +++ + C + + +F+ + ++
Sbjct: 503 LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSL 562
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
+N++I + NG P F M G+ + + AC+ SL L + HA
Sbjct: 563 VSWNTVITGYLQNG-FPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 621
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
+ K +D F+ SLID Y++ G I + ++F+ ++E+ +WN+MI G G
Sbjct: 622 YALKHLLEDDAFIACSLIDMYAKNG--SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLA 679
Query: 203 DGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM-----LQWNIISWST 253
A KLF+EM D +++ +L +G +++ D+M L+ N+ ++
Sbjct: 680 KEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYAC 739
Query: 254 MVCGYSRAGDMDMA-RMLFDKCPEK-NLVLWTTIISG-----YAEKGFMKEATVLYDKME 306
++ RAG +D A R++ ++ E+ ++ +W +++S E G K A L++
Sbjct: 740 VIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMG-EKVAAKLFELEP 798
Query: 307 EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLD 366
E KP++ VL+S L A GLGK V++ R R + L A C ++
Sbjct: 799 E---KPENYVLLSNLYA-------GLGK--WEDVRKVRQRMNEMSLRK----DAGCSWIE 842
Query: 367 AAFGIFSKMTGKKDL 381
+FS + G++ L
Sbjct: 843 LNRKVFSFVVGERFL 857
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 173/620 (27%), Positives = 287/620 (46%), Gaps = 115/620 (18%)
Query: 52 YVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQR 111
++ L ++LC HI+ A +F ++P ++ YN +IR + G + S F M
Sbjct: 50 HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHD-AISVFIRMVS 108
Query: 112 EGV--YPDNFTYPFLLKACTGPSSLPLVQMIHAHVEK-------------------FGFY 150
EGV PD +TYPF+ KA S+ L ++H + + FG
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 151 E------------DIFVPNSLIDSYSRCG---------------GVGIDGAM-------- 175
E D+ N++I Y R G V +D A
Sbjct: 169 EMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC 228
Query: 176 ----------RLFSAMEER---DAV-TWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWN 221
+ +EE+ D + N+++ ++ G +D A +FD M RD+++W
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWT 288
Query: 222 TMLDGYAKAGEMNKAFELFDRMLQW----------------------------------- 246
M++GY + G++ A EL R++Q+
Sbjct: 289 CMINGYTEDGDVENALELC-RLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR 347
Query: 247 -----NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVL 301
+II ++++ Y++ +D+ +F + + W+ II+G + + +A L
Sbjct: 348 QQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGL 407
Query: 302 YDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAK 361
+ +M ++P+ L S+L A A L IH + + F S + +Y+K
Sbjct: 408 FKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 362 CGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
CG L++A IF+ + K KD+V W ++I G+G+HG G AL++F MV G P++ T
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEIT 527
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
F L AC+H+GLV++G F M + Y + + HY C++DLL R G L+EA+ L+ ++
Sbjct: 528 FTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTI 587
Query: 479 PVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVA 538
P EP + V G LL AC H +V+L + LF+L P + GN+ LL+NIYA G W ++
Sbjct: 588 PFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDME 647
Query: 539 SVRLQMKNAGGQKPSGASSI 558
VR M+N G +K G S+I
Sbjct: 648 KVRSMMENVGLRKKPGHSTI 667
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/436 (22%), Positives = 194/436 (44%), Gaps = 26/436 (5%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
+L++ + +H + + L + V L+ + C + A VF+++ +V + +I
Sbjct: 233 DLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMIN 292
Query: 91 AHALNGS-HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF 149
+ +G +L MQ EGV P+ T L+ C + + +H +
Sbjct: 293 GYTEDGDVENALELCRL--MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV 350
Query: 150 YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
Y DI + SLI Y++C V D R+FS + W+++I G V+ + A LF
Sbjct: 351 YSDIIIETSLISMYAKCKRV--DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF 408
Query: 210 DEMPERD----MVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG----YSRA 261
M D + + N++L YA ++ +A + + + +S G YS+
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 262 GDMDMARMLFDKCPE----KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
G ++ A +F+ E K++VLW +ISGY G A ++ +M +G+ P++
Sbjct: 469 GTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITF 528
Query: 318 ISILTACAESGMLGLGKKI-HASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
S L AC+ SG++ G + ++ + + +D+ + G LD A+ + + +
Sbjct: 529 TSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIP 588
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
+ W +++ H + + E+ ++ + E EP+ T +L A +A L GR
Sbjct: 589 FEPTSTVWGALLAACVTH-ENVQLGEMAANKLFE-LEPEN-TGNYVLLANIYAAL---GR 642
Query: 437 NYFNSMEKVYGIVPQI 452
+ MEKV ++ +
Sbjct: 643 --WKDMEKVRSMMENV 656
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 289/544 (53%), Gaps = 20/544 (3%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
L C + V +IH ++K L +D + KL+A FS I A ++F V N+ ++
Sbjct: 35 LRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTNLFMF 93
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
N++IR ++++ P FS F ++ +G+ D F++ LK+C+ + + + +H
Sbjct: 94 NTMIRGYSIS-DEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIAL 152
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER-DAVTWNSMIGGLVRGGDLDG 204
+ GF + N+LI Y CG I A ++F M + DAVT+++++ G ++
Sbjct: 153 RSGFMVFTDLRNALIHFYCVCGK--ISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKAL 210
Query: 205 AFKLFDEMPERDMV----SWNTMLDGYAKAGEMN---KAFELFDRM-LQWNIISWSTMVC 256
A LF M + ++V + + L + G+++ A L ++ L ++ + ++
Sbjct: 211 ALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIG 270
Query: 257 GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
Y + G + AR +FD K++V W +I YA+ G ++E L +M+ +KP+
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
+ +L++CA S +G+ + ++ R + A +DMYAK G L+ A IF++M
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK 390
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG--FEPDKYTFIGLLCACTHAGLVDK 434
KD+ SW +MI G+G HG +A+ LF+ M E P++ TF+ +L AC+H GLV +
Sbjct: 391 -DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVME 449
Query: 435 GRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGAC 494
G F M + Y P++EHYGC++DLL R G LEEA+EL+R++P+ ++ LL AC
Sbjct: 450 GIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAAC 509
Query: 495 RMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSG 554
R++ + +L ++ L ++ + P + LL+ +A AG+ L + G+K +G
Sbjct: 510 RVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN----PEKSLDNELNKGRKEAG 565
Query: 555 ASSI 558
S+I
Sbjct: 566 YSAI 569
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 278/533 (52%), Gaps = 17/533 (3%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
+++H+ + K+ L +D Y A +L ++L + SA +F+ P +V L+NS+IRA+A
Sbjct: 24 TQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYA- 82
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH--AHVEKFGFYED 152
+ S F + R PDNFTY L + + ++ IH A V GF D
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF--D 140
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
++++ +YS+ G I A +LF ++ + D WN MI G G D LF+ M
Sbjct: 141 QICGSAIVKAYSKAGL--IVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLM 198
Query: 213 PER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG----YSRAGDM 264
R + + + G + A+ + L+ N+ S S + C YSR +
Sbjct: 199 QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCI 258
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
A +F+ E +LV +++I+GY+ G KEA L+ ++ +G KPD ++ +L +C
Sbjct: 259 ASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSC 318
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
AE GK++H+ V R KV +A IDMY+KCG L A +F+ + +K++VS+
Sbjct: 319 AELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EKNIVSF 377
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
NS+I G G+HG A E F+ ++ G PD+ TF LLC C H+GL++KG+ F M+
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKS 437
Query: 445 VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELAR 504
+GI PQ EHY M+ L+ G LEEAFE + S+ ++ ++G LL C +H + LA
Sbjct: 438 EFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAE 497
Query: 505 ALSEHLFKLVPSDPGNFS-LLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
++E++ K + +LSN+YA+ G W V +R + + G K G S
Sbjct: 498 VVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 173/606 (28%), Positives = 287/606 (47%), Gaps = 50/606 (8%)
Query: 29 CSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSL 88
C +++ K IH+ ++K + L V+ ++A ++ C + A F ++ +V +NS+
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSV 253
Query: 89 IRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFG 148
+ A+ NG H M++EG+ P T+ L+ + +E FG
Sbjct: 254 LLAYCQNGKHEE-AVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 149 FYEDIFVPNSLIDSYSRCG---------------GVGIDGAMRLFSAMEE---------- 183
D+F ++I G GV + A+ + SA+
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV-VPNAVTIMSAVSACSCLKVINQG 371
Query: 184 -------------RDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKA 230
D + NS++ + G L+ A K+FD + +D+ +WN+M+ GY +A
Sbjct: 372 SEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQA 431
Query: 231 GEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGD----MDM-ARMLFDKCPEKNLVL 281
G KA+ELF RM L+ NII+W+TM+ GY + GD MD+ RM D ++N
Sbjct: 432 GYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTAT 491
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ 341
W II+GY + G EA L+ KM+ + P+ ++S+L ACA + ++IH V
Sbjct: 492 WNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVL 551
Query: 342 RCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKAL 401
R V NA D YAK G ++ + IF M KD+++WNS+I G+ +HG AL
Sbjct: 552 RRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME-TKDIITWNSLIGGYVLHGSYGPAL 610
Query: 402 ELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDL 461
LF+ M +G P++ T ++ A G VD+G+ F S+ Y I+P +EH M+ L
Sbjct: 611 ALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYL 670
Query: 462 LSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNF 521
R LEEA + ++ M ++ + + L CR+H D+++A +E+LF L P +
Sbjct: 671 YGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATE 730
Query: 522 SLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIY 581
S++S IYA ++ +KP G S I FT D S +D +Y
Sbjct: 731 SIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLY 790
Query: 582 QMIGRL 587
++ ++
Sbjct: 791 PLVEKM 796
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/496 (26%), Positives = 236/496 (47%), Gaps = 47/496 (9%)
Query: 50 DLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHM 109
D++V KL++ ++ C I+ A VF+ + N+ ++++I A++ + F M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA-KLFRLM 172
Query: 110 QREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV 169
++GV PD+F +P +L+ C + ++IH+ V K G + V NS++ Y++CG
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCG-- 230
Query: 170 GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAK 229
+LD A K F M ERD+++WN++L Y +
Sbjct: 231 -------------------------------ELDFATKFFRRMRERDVIAWNSVLLAYCQ 259
Query: 230 AGEMNKAFELFDRMLQWNI----ISWSTMVCGYSRAGDMDMARMLFDKCPE----KNLVL 281
G+ +A EL M + I ++W+ ++ GY++ G D A L K ++
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ 341
WT +ISG G +A ++ KM AG+ P+ ++S ++AC+ ++ G ++H+
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 342 RCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKAL 401
+ F V N+ +DMY+KCG L+ A +F + KD+ +WNSMI G+ G KA
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN-KDVYTWNSMITGYCQAGYCGKAY 438
Query: 402 ELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDL 461
ELF+ M P+ T+ ++ G + + F MEK + + +I
Sbjct: 439 ELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAG 498
Query: 462 LSRGGHLEEAFELLRSMPVE---PNAIVVGTLLGACRMHNDVELARALSEHLFKL-VPSD 517
+ G +EA EL R M PN++ + +LL AC ++ R + + + + +
Sbjct: 499 YIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAI 558
Query: 518 PGNFSLLSNIYAQAGD 533
+ L++ YA++GD
Sbjct: 559 HAVKNALTDTYAKSGD 574
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 162/412 (39%), Gaps = 116/412 (28%)
Query: 111 REGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE--DIFVPNSLIDSYSRCGG 168
++G TY LL++C S+ L +++HA +FG + D+FV L+ Y++CG
Sbjct: 74 QQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGC 130
Query: 169 VGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYA 228
+ A K+FD M ER++ +W+ M+ Y+
Sbjct: 131 IA---------------------------------DARKVFDSMRERNLFTWSAMIGAYS 157
Query: 229 KAGEMNKAFELFDRMLQWNI---------ISWSTMVCG---------------------- 257
+ + +LF M++ + I CG
Sbjct: 158 RENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLR 217
Query: 258 --------YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
Y++ G++D A F + E++++ W +++ Y + G +EA L +ME+ G
Sbjct: 218 VSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
+ P G++ N I Y + G DAA
Sbjct: 278 ISP---------------GLV--------------------TWNILIGGYNQLGKCDAAM 302
Query: 370 GIFSKMTG---KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCAC 426
+ KM D+ +W +MI G +G +AL++F M G P+ T + + AC
Sbjct: 303 DLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSAC 362
Query: 427 THAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
+ ++++G +S+ G + + ++D+ S+ G LE+A ++ S+
Sbjct: 363 SCLKVINQGSE-VHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 14/224 (6%)
Query: 293 GFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK-- 350
G + EA D + + G K + +L +C +SG + LG+ +HA RF T+
Sbjct: 60 GSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA-----RFGLFTEPD 114
Query: 351 --VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMV 408
V + MYAKCGC+ A +F M +++L +W++MI + + + +LF M+
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMR-ERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 409 HEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHL 468
+G PD + F +L C + G V+ G+ + + K+ G+ + ++ + ++ G L
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKL-GMSSCLRVSNSILAVYAKCGEL 232
Query: 469 EEAFELLRSMPVEPNAIVVGTLLGAC---RMHNDVELARALSEH 509
+ A + R M LL C + VEL + + +
Sbjct: 233 DFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 125/330 (37%), Positives = 195/330 (59%), Gaps = 5/330 (1%)
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCP 275
D+ + NT++ Y+ ++ A +LFD Q ++++++ ++ G +A ++ AR LFD P
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 276 EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKK 335
++LV W ++ISGYA+ +EA L+D+M GLKPD+ ++S L+ACA+SG GK
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 336 IHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHG 395
IH +R R + + +D YAKCG +D A IF ++ K L +WN+MI G +HG
Sbjct: 271 IHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIF-ELCSDKTLFTWNAMITGLAMHG 329
Query: 396 QGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHY 455
GE ++ F MV G +PD TFI +L C+H+GLVD+ RN F+ M +Y + +++HY
Sbjct: 330 NGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHY 389
Query: 456 GCMIDLLSRGGHLEEAFELLRSMPVE----PNAIVVGTLLGACRMHNDVELARALSEHLF 511
GCM DLL R G +EEA E++ MP + + LLG CR+H ++E+A + +
Sbjct: 390 GCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVK 449
Query: 512 KLVPSDPGNFSLLSNIYAQAGDWMNVASVR 541
L P D G + ++ +YA A W V VR
Sbjct: 450 ALSPEDGGVYKVMVEMYANAERWEEVVKVR 479
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 197/433 (45%), Gaps = 60/433 (13%)
Query: 26 LHRCSNLDLVKQIHAQLLKA-----HLHQDLYVAPKLIAAFSLC-------RHISSAVNV 73
L C L + Q HAQ + + Q+ A L A S+ +S A +V
Sbjct: 11 LKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSV 70
Query: 74 FNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSS 133
F + P+ +N++IR L+ + F M+R V PD T+PF+ KAC +
Sbjct: 71 FRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKN 130
Query: 134 --LPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNS 191
L LV+ +H +FG D+F N+LI YS ID A++LF +RD VT+N
Sbjct: 131 GDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAP--IDSALQLFDENPQRDVVTYNV 188
Query: 192 MIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----- 246
+I GLV+ ++ A +LFD MP RD+VSWN+++ GYA+ +A +LFD M+
Sbjct: 189 LIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPD 248
Query: 247 NIISWSTM-VCG---------------------------------YSRAGDMDMARMLFD 272
N+ ST+ C Y++ G +D A +F+
Sbjct: 249 NVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFE 308
Query: 273 KCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGL 332
C +K L W +I+G A G + + KM +G+KPD IS+L C+ SG++
Sbjct: 309 LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDE 368
Query: 333 GKKIHASVQRC-RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT----GKKDLVSWNSM 387
+ + ++ K D+ + G ++ A + +M ++ L++W+ +
Sbjct: 369 ARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGL 428
Query: 388 IHGFGVHGQGEKA 400
+ G +HG E A
Sbjct: 429 LGGCRIHGNIEIA 441
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 210/351 (59%), Gaps = 5/351 (1%)
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
+ +V YS+ GDM+ AR +FD+ PEK++V W +++SG+ + G EA ++ +M E+G +
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
PD +S+L+ACA++G + LG +H + + K+ A I++Y++CG + A +
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE-GFEPDKYTFIGLLCACTHAG 430
F KM + ++ +W +MI +G HG G++A+ELF+ M + G P+ TF+ +L AC HAG
Sbjct: 266 FDKMK-ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAG 324
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVG-- 488
LV++GR+ + M K Y ++P +EH+ CM+D+L R G L+EA++ + + A
Sbjct: 325 LVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALW 384
Query: 489 -TLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNA 547
+LGAC+MH + +L +++ L L P +PG+ +LSNIYA +G V+ +R M
Sbjct: 385 TAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRN 444
Query: 548 GGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
+K G S I F++ D SH ++ +IY+ + L+ +++GY P
Sbjct: 445 NLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAP 495
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 199/394 (50%), Gaps = 18/394 (4%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
++Q+HA L+ + + KLI R I+ +F VP P+ L+NS+I++ +
Sbjct: 25 LQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS- 83
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
P + + M V P N+T+ ++K+C S+L + + +H H GF D +
Sbjct: 84 KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
V +L+ YS+CG ++GA ++F M E+ V WNS++ G + G D A ++F +M E
Sbjct: 144 VQAALVTFYSKCGD--MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 215 R----DMVSWNTMLDGYAKAGEMNKAF----ELFDRMLQWNIISWSTMVCGYSRAGDMDM 266
D ++ ++L A+ G ++ + L N+ + ++ YSR GD+
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME-EAGLKPDDGVLISILTACA 325
AR +FDK E N+ WT +IS Y G+ ++A L++KME + G P++ +++L+ACA
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 326 ESGMLGLGKKIHASVQRC-RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM--TGKKDLV 382
+G++ G+ ++ + + R + +DM + G LD A+ ++ TGK
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP 381
Query: 383 S-WNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
+ W +M+ +H + +E+ ++ EPD
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKRLI--ALEPD 413
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 8/221 (3%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
S L + K +H + + D YV L+ +S C + A VF+++P ++ +NSL+
Sbjct: 121 SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLV 180
Query: 90 RAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF 149
NG F+ M+ G PD+ T+ LL AC ++ L +H ++ G
Sbjct: 181 SGFEQNGLADE-AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL 239
Query: 150 YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
++ + +LI+ YSRCG VG A +F M+E + W +MI G A +LF
Sbjct: 240 DLNVKLGTALINLYSRCGDVG--KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELF 297
Query: 210 DEM-----PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ 245
++M P + V++ +L A AG + + ++ RM +
Sbjct: 298 NKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTK 338
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 174/615 (28%), Positives = 291/615 (47%), Gaps = 107/615 (17%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQ------------------- 76
+QIH ++LK+ L + Y+ ++ ++ CR ++ A +VF
Sbjct: 61 RQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRS 120
Query: 77 ------------VPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFL 124
+P + Y +LI+ +A N + S F M+ G+ + T +
Sbjct: 121 RRLWDALKLFDVMPERSCVSYTTLIKGYAQN-NQWSEAMELFREMRNLGIMLNEVTLATV 179
Query: 125 LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER 184
+ AC+ + +M+ + K +FV +L+ Y C + + A +LF M ER
Sbjct: 180 ISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC--LCLKDARKLFDEMPER 237
Query: 185 DAVTWN-------------------------------SMIGGLVRGGDLDGAFKLFDEM- 212
+ VTWN +MI G +R LD A + EM
Sbjct: 238 NLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEML 297
Query: 213 -----PER----DMVSWN-----------------------------TMLDGYAKAGEMN 234
P D++S + T++ YA + ++
Sbjct: 298 RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIK 357
Query: 235 KAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGF 294
A + F+ ++ +I S + ++ G+ + G ++ AR +FD+ +K++ W +ISGYA+
Sbjct: 358 LALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLS 417
Query: 295 MKEATVLYDKM-EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLN 353
+ A L+ +M + +KPD ++S+ +A + G L GK+ H + + +
Sbjct: 418 PQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTA 477
Query: 354 AFIDMYAKCGCLDAAFGIF--SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
A IDMYAKCG ++ A IF +K + WN++I G HG + AL+L+S +
Sbjct: 478 AIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLP 537
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
+P+ TF+G+L AC HAGLV+ G+ YF SM+ +GI P I+HYGCM+DLL + G LEEA
Sbjct: 538 IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEA 597
Query: 472 FELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQA 531
E+++ MPV+ + ++ G LL A R H +VE+A + L + PS G +LSN+YA A
Sbjct: 598 KEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADA 657
Query: 532 GDWMNVASVRLQMKN 546
G W +VA VR +M+
Sbjct: 658 GRWEDVALVREEMRT 672
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 129/537 (24%), Positives = 220/537 (40%), Gaps = 153/537 (28%)
Query: 125 LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER 184
L +C + + + IH V K G + ++ NS+++ Y++C + A +F +
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA--DAESVFRDHAKL 105
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM- 243
D+ ++N M+ G VR L A KLFD MPER VS+ T++ GYA+ + ++A ELF M
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 165
Query: 244 ---LQWNIISWSTMVCGYSRAG---DMDM------------------------------- 266
+ N ++ +T++ S G D M
Sbjct: 166 NLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLK 225
Query: 267 -ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEE------------------ 307
AR LFD+ PE+NLV W +++GY++ G +++A L+D++ E
Sbjct: 226 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 308 -------------AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRC------- 347
G+KP + +++ +L+A A S G ++H ++ + F C
Sbjct: 286 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQAT 345
Query: 348 --------------------STK----VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
S K NA I + K G ++ A +F + T KD+ S
Sbjct: 346 IIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQ-THDKDIFS 404
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGR---NYF 439
WN+MI G+ + AL LF M+ +PD T + + A + G +++G+ +Y
Sbjct: 405 WNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 464
Query: 440 NSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFEL------------------------- 474
N I P +ID+ ++ G +E A +
Sbjct: 465 N----FSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
Query: 475 ------------LRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPG 519
L+S+P++PN+I +L AC VEL + F+ + SD G
Sbjct: 521 GHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKT----YFESMKSDHG 573
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/455 (33%), Positives = 245/455 (53%), Gaps = 25/455 (5%)
Query: 171 IDGAMRLFSAMEERDAVTWNSMIGGLVRG-GDLDGAFKLFDEMPER-----DMVSWNTML 224
++ A R+F ++E + WN++I + AF L+ +M ER D ++ +L
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 225 DGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
A ++ ++ ++++ ++ + ++ Y G +D+AR +FD+ PE++LV
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
W ++I G A L+ +M+ + +PD + S+L+ACA G L LG HA +
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 341 QR-CRFRCSTKVL--NAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQG 397
R C + VL N+ I+MY KCG L A +F M K+DL SWN+MI GF HG+
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRA 336
Query: 398 EKALELFSSMV--HEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHY 455
E+A+ F MV E P+ TF+GLL AC H G V+KGR YF+ M + Y I P +EHY
Sbjct: 337 EEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHY 396
Query: 456 GCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGA-CRMHNDVELARALSEHLFKLV 514
GC++DL++R G++ EA +++ SMP++P+A++ +LL A C+ VEL+ ++ ++
Sbjct: 397 GCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTK 456
Query: 515 PSD-------PGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXF 567
+ G + LLS +YA A W +V VR M G +K G SSI F
Sbjct: 457 EDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEF 516
Query: 568 TVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGIYQ 602
D SHP++ IYQ + + LR +GY+P Q
Sbjct: 517 FAGDTSHPQTKQIYQQLKVIDDRLRSIGYLPDRSQ 551
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 175/410 (42%), Gaps = 85/410 (20%)
Query: 29 CSNLDLVKQIHAQLLKAHLHQD---LYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
CS++ +KQ+HA L+ ++ L++ K++ S ++ A VF+ + + ++
Sbjct: 58 CSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMW 117
Query: 86 NSLIRAHALNGSHPSLTFSTFFHM-QREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
N+LIRA A + S F + M +R PD T+PF+LKAC + +H +
Sbjct: 118 NTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQI 177
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDG 204
K GF D++V N LI Y CG LD
Sbjct: 178 VKHGFGGDVYVNNGLIHLYGSCGC---------------------------------LDL 204
Query: 205 AFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ------------------- 245
A K+FDEMPER +VSWN+M+D + GE + A +LF M +
Sbjct: 205 ARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGL 264
Query: 246 -------W---------------NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWT 283
W +++ ++++ Y + G + MA +F +++L W
Sbjct: 265 GSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWN 324
Query: 284 TIISGYAEKGFMKEATVLYDKM--EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ 341
+I G+A G +EA +D+M + ++P+ + +L AC G + G++ +
Sbjct: 325 AMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM- 383
Query: 342 RCRFRCSTKVLNAF---IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
R C L + +D+ A+ G + A + M K D V W S++
Sbjct: 384 -VRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 136/302 (45%), Gaps = 42/302 (13%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
KQ+H Q++K D+YV LI + C + A VF+++P ++ +NS+I A
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEK---FGFYED 152
G + S F MQR PD +T +L AC G SL L HA + + D
Sbjct: 231 GEYDS-ALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
+ V NSLI+ Y +CG + + A ++F M++RD +WN+MI G G + A FD M
Sbjct: 289 VLVKNSLIEMYCKCGSLRM--AEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 213 PER------DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDM 266
++ + V++ +L G +NK + FD M++
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR--------------------- 385
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
D C E L + I+ A G++ EA D + +KPD + S+L AC +
Sbjct: 386 -----DYCIEPALEHYGCIVDLIARAGYITEAI---DMVMSMPMKPDAVIWRSLLDACCK 437
Query: 327 SG 328
G
Sbjct: 438 KG 439
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Query: 259 SRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKE-ATVLYDKMEEAG-LKPDDGV 316
S D++ A +FD + +W T+I A KE A +LY KM E G PD
Sbjct: 94 SSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHT 153
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
+L ACA GK++H + + F V N I +Y CGCLD A +F +M
Sbjct: 154 FPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMP 213
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKG 435
++ LVSWNSMI G+ + AL+LF M FEPD YT +L AC G + G
Sbjct: 214 -ERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLG 270
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 254/491 (51%), Gaps = 23/491 (4%)
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR----LFS 179
+++ G +S+ ++ IH+HV G + N L+ R V + G++ LF
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLL----RFCAVSVTGSLSHAQLLFD 63
Query: 180 AMEERDAVT-WNSMIGGLVRGGDLDGAFKLFDEM-----PERDMVSWNTMLDGYAKAGEM 233
+ + + WN +I G + ++ M D+ ++N L + +
Sbjct: 64 HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123
Query: 234 NKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGY 289
K E+ +++ + I +++V YS G +++A +FD+ P ++LV W +I +
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183
Query: 290 AEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCST 349
+ G +A +Y +M G+ D L+++L++CA L +G +H C RC +
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIA--CDIRCES 241
Query: 350 KVL--NAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSM 407
V NA IDMYAKCG L+ A G+F+ M K+D+++WNSMI G+GVHG G +A+ F M
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 408 VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGH 467
V G P+ TF+GLL C+H GLV +G +F M + + P ++HYGCM+DL R G
Sbjct: 301 VASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQ 360
Query: 468 LEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNI 527
LE + E++ + + ++ TLLG+C++H ++EL + L +L + G++ L+++I
Sbjct: 361 LENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSI 420
Query: 528 YAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRL 587
Y+ A D AS+R +++ Q G S I F V D HP+S IY +G +
Sbjct: 421 YSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEV 480
Query: 588 VHDLRQVGYVP 598
++ GY P
Sbjct: 481 INRAILAGYKP 491
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 183/412 (44%), Gaps = 23/412 (5%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHL--HQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY-PNV 82
L C+++ +++IH+ ++ L H ++ A S+ +S A +F+ P+
Sbjct: 12 LQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPST 71
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGV-YPDNFTYPFLLKACTGPSSLPLVQMIH 141
+N LIR + N S P + + M V PD FT+ F LK+C S+P IH
Sbjct: 72 SDWNYLIRGFS-NSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIH 130
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
V + GF +D V SL+ YS G V I A ++F M RD V+WN MI G
Sbjct: 131 GSVIRSGFLDDAIVATSLVRCYSANGSVEI--ASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 202 LDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELF----DRMLQWNIISWST 253
+ A ++ M D + +L A +N L D + + +
Sbjct: 189 HNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNA 248
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
++ Y++ G ++ A +F+ +++++ W ++I GY G EA + KM +G++P+
Sbjct: 249 LIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPN 308
Query: 314 DGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGI 371
+ +L C+ G++ G + H + +F + V +D+Y + G L+ + +
Sbjct: 309 AITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEM 367
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQ---GEKALELFSSMVHEGFEPDKYTFI 420
+ +D V W +++ +H GE A++ + E F Y +
Sbjct: 368 IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQL--EAFNAGDYVLM 417
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 158/573 (27%), Positives = 297/573 (51%), Gaps = 32/573 (5%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
L + + +H Q+ + D + L+ +S C + S+ +F ++ N + ++I +
Sbjct: 218 LRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISS 277
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF-- 149
+ G +F M + G+ P+ T +L +C L+ +I GF
Sbjct: 278 YN-RGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSC------GLIGLIREGKSVHGFAV 330
Query: 150 -------YEDIFVPNSLIDSYSRCGGVG-IDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
YE + + +L++ Y+ CG + + +R+ S +R+ V WNS+I G
Sbjct: 331 RRELDPNYESLSL--ALVELYAECGKLSDCETVLRVVS---DRNIVAWNSLISLYAHRGM 385
Query: 202 LDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI---ISWSTM 254
+ A LF +M + D + + + AG + ++ +++ ++ +++
Sbjct: 386 VIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSL 445
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
+ YS++G +D A +F++ +++V W +++ G+++ G EA L+D M + L+ ++
Sbjct: 446 IDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNE 505
Query: 315 GVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSK 374
++++ AC+ G L GK +H + + A IDMYAKCG L+AA +F
Sbjct: 506 VTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRA 564
Query: 375 MTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDK 434
M+ + + +SMI+ +G+HG+ A+ F+ MV G +P++ F+ +L AC H+G V++
Sbjct: 565 MSSRSIVSW-SSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEE 623
Query: 435 GRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGAC 494
G+ YFN M K +G+ P EH+ C IDLLSR G L+EA+ ++ MP +A V G+L+ C
Sbjct: 624 GKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGC 682
Query: 495 RMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSG 554
R+H +++ +A+ L +V D G ++LLSNIYA+ G+W +R MK++ +K G
Sbjct: 683 RIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPG 742
Query: 555 ASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRL 587
S+I F + + ++D+IY+ +G L
Sbjct: 743 YSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/552 (25%), Positives = 259/552 (46%), Gaps = 55/552 (9%)
Query: 29 CSNLDLVKQIHAQLL-KAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
CS+L LV Q+HA LL L +D KLI +++ S+ VF PYP+ +Y
Sbjct: 11 CSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGV 70
Query: 88 LIR----AHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSS-LPLVQMIHA 142
LI+ H L+ + + + E F +P +L+AC G L + +H
Sbjct: 71 LIKCNVWCHLLDAA-----IDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHG 125
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
+ K G +D + SL+ Y + G + A ++F M RD V W++++ + G++
Sbjct: 126 RIIKGGVDDDAVIETSLLCMYGQTG--NLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEV 183
Query: 203 DGAFKLF----DEMPERDMVSWNTMLDGYAKAGEMNKAF----ELFDRMLQWNIISWSTM 254
A ++F D+ E D V+ ++++G A+ G + A ++ +M + +++
Sbjct: 184 VKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSL 243
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
+ YS+ GD+ + +F+K +KN V WT +IS Y F ++A + +M ++G++P+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 315 GVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLN-AFIDMYAKCGCLDAAFGIFS 373
L S+L++C G++ GK +H R + + L+ A +++YA+CG L +
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVL- 362
Query: 374 KMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVD 433
++ +++V+WNS+I + G +AL LF MV + +PD +T + AC +AGLV
Sbjct: 363 RVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVP 422
Query: 434 KGRNYF--------------NSMEKVYG----------IVPQIEH-----YGCMIDLLSR 464
G+ NS+ +Y + QI+H + M+ S+
Sbjct: 423 LGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQ 482
Query: 465 GGHLEEAFELLRSM---PVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNF 521
G+ EA L M +E N + ++ AC +E + + L D
Sbjct: 483 NGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTD 542
Query: 522 SLLSNIYAQAGD 533
+ L ++YA+ GD
Sbjct: 543 TALIDMYAKCGD 554
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/486 (26%), Positives = 243/486 (50%), Gaps = 22/486 (4%)
Query: 3 VSAGVRIPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFS 62
VS +I + P L + C R +L + ++H +++K + D + L+ +
Sbjct: 92 VSETTQISKFVFPSVL---RACAGSR-EHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYG 147
Query: 63 LCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYP 122
++S A VF+ +P ++ +++L+ + NG F M +GV PD T
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVK-ALRMFKCMVDDGVEPDAVTMI 206
Query: 123 FLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
+++ C L + + +H + + F D + NSL+ YS+CG + + R+F +
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCG--DLLSSERIFEKIA 264
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEM----PERDMVSWNTMLD-----GYAKAGEM 233
+++AV+W +MI RG + A + F EM E ++V+ ++L G + G+
Sbjct: 265 KKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKS 324
Query: 234 NKAFELFDRMLQWNIISWS-TMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEK 292
F + R L N S S +V Y+ G + + ++N+V W ++IS YA +
Sbjct: 325 VHGFAV-RRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHR 383
Query: 293 GFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL 352
G + +A L+ +M +KPD L S ++AC +G++ LGK+IH V R V
Sbjct: 384 GMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQ 442
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGF 412
N+ IDMY+K G +D+A +F+++ + +V+WNSM+ GF +G +A+ LF M H
Sbjct: 443 NSLIDMYSKSGSVDSASTVFNQIK-HRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYL 501
Query: 413 EPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAF 472
E ++ TF+ ++ AC+ G ++KG+ + + + + + +ID+ ++ G L A
Sbjct: 502 EMNEVTFLAVIQACSSIGSLEKGKWVHHKL--IISGLKDLFTDTALIDMYAKCGDLNAAE 559
Query: 473 ELLRSM 478
+ R+M
Sbjct: 560 TVFRAM 565
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/470 (26%), Positives = 223/470 (47%), Gaps = 50/470 (10%)
Query: 121 YPFLLKACTGPSSLPLVQMIHAHVEKFG-FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFS 179
Y L ++C SSL LV +HAH+ G D LI+SY+ G D + +F
Sbjct: 4 YMPLFRSC---SSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSP--DSSRLVFE 58
Query: 180 AMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM-PERDMVS---WNTMLDGYAKAGE-MN 234
A D+ + +I V LD A L+ + E +S + ++L A + E ++
Sbjct: 59 AFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLS 118
Query: 235 KAFELFDRMLQWNI----ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
++ R+++ + + ++++C Y + G++ A +FD P ++LV W+T++S
Sbjct: 119 VGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCL 178
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
E G + +A ++ M + G++PD +IS++ CAE G L + + +H + R F
Sbjct: 179 ENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
+ N+ + MY+KCG L ++ IF K+ KK+ VSW +MI + EKAL FS M+
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKI-AKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGR-------------NY----------------FNS 441
G EP+ T +L +C GL+ +G+ NY +
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357
Query: 442 MEKVYGIVP--QIEHYGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIVVGTLLGACRM 496
E V +V I + +I L + G + +A L R M ++P+A + + + AC
Sbjct: 358 CETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Query: 497 HNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKN 546
V L + + H+ + SD + L ++Y+++G + ++V Q+K+
Sbjct: 418 AGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKH 467
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 260/516 (50%), Gaps = 36/516 (6%)
Query: 66 HISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREG-VYPDNFTYPFL 124
I A ++F+++ NV + ++I + G F F M++EG V ++ T +
Sbjct: 223 RIVDARSLFDRMTERNVITWTAMIDGYFKAGFFED-GFGLFLRMRQEGDVKVNSNTLAVM 281
Query: 125 LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER 184
KAC IH V + D+F+ NSL+ YS+ G +G E
Sbjct: 282 FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMG------------EA 329
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML 244
AV F M +D VSWN+++ G + ++++A+ELF++M
Sbjct: 330 KAV---------------------FGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP 368
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
+++SW+ M+ G+S G++ LF PEK+ + WT +IS + G+ +EA + K
Sbjct: 369 GKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHK 428
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
M + + P+ S+L+A A L G +IH V + V N+ + MY KCG
Sbjct: 429 MLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGN 488
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
+ A+ IFS ++ + ++VS+N+MI G+ +G G+KAL+LFS + G EP+ TF+ LL
Sbjct: 489 TNDAYKIFSCIS-EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLS 547
Query: 425 ACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNA 484
AC H G VD G YF SM+ Y I P +HY CM+DLL R G L++A L+ +MP +P++
Sbjct: 548 ACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHS 607
Query: 485 IVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQM 544
V G+LL A + H V+LA ++ L +L P + +LS +Y+ G + +
Sbjct: 608 GVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIK 667
Query: 545 KNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDI 580
K+ +K G+S I F D S ++I
Sbjct: 668 KSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 166/328 (50%), Gaps = 20/328 (6%)
Query: 174 AMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE--RDMVSWNTMLDGYAKAG 231
A LF + E++AV++ +MI G VR G D A L+ E P RD V+ N +L GY +AG
Sbjct: 132 AYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAG 191
Query: 232 EMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAE 291
+ N+A +F M ++S S+MV GY + G + AR LFD+ E+N++ WT +I GY +
Sbjct: 192 KWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFK 251
Query: 292 KGFMKEATVLYDKMEEAG-LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
GF ++ L+ +M + G +K + L + AC + G +IH V R
Sbjct: 252 AGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLF 311
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
+ N+ + MY+K G + A +F M KD VSWNS+I G Q +A ELF M +
Sbjct: 312 LGNSLMSMYSKLGYMGEAKAVFGVMKN-KDSVSWNSLITGLVQRKQISEAYELFEKMPGK 370
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEH--YGCMIDLLSRGGHL 468
D ++ ++ + G + K +++G++P+ ++ + MI G+
Sbjct: 371 ----DMVSWTDMIKGFSGKGEISK-------CVELFGMMPEKDNITWTAMISAFVSNGYY 419
Query: 469 EEA---FELLRSMPVEPNAIVVGTLLGA 493
EEA F + V PN+ ++L A
Sbjct: 420 EEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 171/391 (43%), Gaps = 53/391 (13%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
QIH + + L DL++ L++ +S ++ A VF + + +NSLI +
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITG-LVQR 354
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
S + F M + D ++ ++K +G +
Sbjct: 355 KQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEI---------------------- 388
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERD 216
S+C + LF M E+D +TW +MI V G + A F +M +++
Sbjct: 389 -------SKC--------VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKE 433
Query: 217 MV----SWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS----WSTMVCGYSRAGDMDMAR 268
+ +++++L A ++ + ++ R+++ NI++ +++V Y + G+ + A
Sbjct: 434 VCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAY 493
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG 328
+F E N+V + T+ISGY+ GF K+A L+ +E +G +P+ +++L+AC G
Sbjct: 494 KIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVG 553
Query: 329 MLGLGKKIHASVQRC-RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSM 387
+ LG K S++ +D+ + G LD A + S M K W S+
Sbjct: 554 YVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSL 613
Query: 388 IHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
+ H + + A EL + + E EPD T
Sbjct: 614 LSASKTHLRVDLA-ELAAKKLIE-LEPDSAT 642
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 146/324 (45%), Gaps = 43/324 (13%)
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNII 249
NS I R G+L A +F +M R +VSW M+ YA+ G+M+KA+++FD M
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 250 SWSTMVCGYSRAG-DMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEA 308
S++ M+ + D+ A LF PEKN V + T+I+G+ G EA LY E
Sbjct: 114 SYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLY---AET 170
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL--NAFIDMYAKCGCLD 366
+K D V ++L SG L G K + +V+ + +V+ ++ + Y K G +
Sbjct: 171 PVKFRDSVASNVLL----SGYLRAG-KWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIV 225
Query: 367 AAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG-FEPDKYTFIGLLCA 425
A +F +MT ++++++W +MI G+ G E LF M EG + + T + A
Sbjct: 226 DARSLFDRMT-ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKA 284
Query: 426 CTH----------AGLVDK------------------GRNYFNSMEKVYGIVPQIE--HY 455
C GLV + Y + V+G++ + +
Sbjct: 285 CRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSW 344
Query: 456 GCMIDLLSRGGHLEEAFELLRSMP 479
+I L + + EA+EL MP
Sbjct: 345 NSLITGLVQRKQISEAYELFEKMP 368
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 17/299 (5%)
Query: 36 KQIHA--QLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHA 93
KQI +L + +D+ +I FS IS V +F +P + + ++I A
Sbjct: 355 KQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFV 414
Query: 94 LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
NG + F M ++ V P+++T+ +L A + L IH V K D+
Sbjct: 415 SNGYYEE-ALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDL 473
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM- 212
V NSL+ Y +CG + A ++FS + E + V++N+MI G G A KLF +
Sbjct: 474 SVQNSLVSMYCKCGNT--NDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLE 531
Query: 213 ---PERDMVSWNTMLDGYAKAGEMNKAFELFDRML-QWNIIS----WSTMVCGYSRAGDM 264
E + V++ +L G ++ ++ F M +NI ++ MV R+G +
Sbjct: 532 SSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLL 591
Query: 265 DMARMLFDKCPEK-NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILT 322
D A L P K + +W +++S + A + K+ E L+PD +L+
Sbjct: 592 DDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIE--LEPDSATPYVVLS 648
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 14/128 (10%)
Query: 12 WFSPRRLLEEKLC--------TLHRCSNL-DLVK--QIHAQLLKAHLHQDLYVAPKLIAA 60
WF ++L++++C L ++L DL++ QIH +++K ++ DL V L++
Sbjct: 425 WF--HKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSM 482
Query: 61 FSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFT 120
+ C + + A +F+ + PN+ YN++I ++ NG F ++ G P+ T
Sbjct: 483 YCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNG-FGKKALKLFSMLESSGKEPNGVT 541
Query: 121 YPFLLKAC 128
+ LL AC
Sbjct: 542 FLALLSAC 549
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 161/534 (30%), Positives = 270/534 (50%), Gaps = 17/534 (3%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI----R 90
VKQ H ++K ++ L++ KL+ A++ R A +F+++P N+ +N LI +
Sbjct: 55 VKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQ 114
Query: 91 AHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY 150
L F + V D+ ++ L++ CT +++ +H + K G
Sbjct: 115 RDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLE 174
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
F SL+ Y +CG I A R+F A+ +RD V WN+++ V G +D AF L
Sbjct: 175 SSCFPSTSLVHFYGKCGL--IVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 211 EMPER------DMVSWNTMLDG-YAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGD 263
M D +++++L + G+ A LF Q++I + ++ Y+++
Sbjct: 233 LMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHAI-LFKVSYQFDIPVATALLNMYAKSNH 291
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+ AR F+ +N+V W +I G+A+ G +EA L+ +M L+PD+ S+L++
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS 351
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
CA+ + K++ A V + V N+ I Y++ G L A F + + DLVS
Sbjct: 352 CAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIR-EPDLVS 410
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
W S+I HG E++L++F SM+ + +PDK TF+ +L AC+H GLV +G F M
Sbjct: 411 WTSVIGALASHGFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMT 469
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
+ Y I + EHY C+IDLL R G ++EA ++L SMP EP+ + G C +H E
Sbjct: 470 EFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESM 529
Query: 504 RALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVR-LQMKNAGGQKPSGAS 556
+ ++ L ++ P+ P N+S+LSN Y G W A +R + +N K G S
Sbjct: 530 KWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 179/387 (46%), Gaps = 19/387 (4%)
Query: 22 KLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
+LCT +N+ Q+H ++K L + + L+ + C I A VF V +
Sbjct: 150 RLCT--DSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRD 207
Query: 82 VHLYNSLIRAHALNGS-HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
+ L+N+L+ ++ LNG + + D FT+ LL AC + + I
Sbjct: 208 LVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQI 263
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
HA + K + DI V +L++ Y++ + A F +M R+ V+WN+MI G + G
Sbjct: 264 HAILFKVSYQFDIPVATALLNMYAKSN--HLSDARECFESMVVRNVVSWNAMIVGFAQNG 321
Query: 201 DLDGAFKLFDEM----PERDMVSWNTMLDGYAKAG---EMNKAFELFDRMLQWNIISWS- 252
+ A +LF +M + D +++ ++L AK E+ + + + + +S +
Sbjct: 322 EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVAN 381
Query: 253 TMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP 312
+++ YSR G++ A + F E +LV WT++I A GF +E+ +++ M + L+P
Sbjct: 382 SLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-LQP 440
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRC-RFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
D + +L+AC+ G++ G + + + + ID+ + G +D A +
Sbjct: 441 DKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDV 500
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+ M + + + G +H + E
Sbjct: 501 LNSMPTEPSTHALAAFTGGCNIHEKRE 527
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/623 (28%), Positives = 297/623 (47%), Gaps = 59/623 (9%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAF-----SLCRHISSAVNVFNQVPYPNV 82
R S L QIH ++K+ ++V+ L++ + S C + + +F+++P +V
Sbjct: 193 RVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV---LKLFDEIPQRDV 249
Query: 83 HLYNSLIRAHALNG-SHPSLTFSTFFHMQR-EGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
+N+++ + G SH + F F+ M R EG D+FT LL +CT S L + +
Sbjct: 250 ASWNTVVSSLVKEGKSHKA--FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
H + G +++ V N+LI YS+ + L+ M +DAVT+ MI + G
Sbjct: 308 HGRAIRIGLMQELSVNNALIGFYSKFWD--MKKVESLYEMMMAQDAVTFTEMITAYMSFG 365
Query: 201 DLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI------ISWSTM 254
+D A ++F + E++ +++N ++ G+ + G KA +LF MLQ + ++ +
Sbjct: 366 MVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVD 425
Query: 255 VCGY---------------------------------SRAGDMDMARMLFDKCPEK--NL 279
CG +R M A +FD+ P +
Sbjct: 426 ACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSS 485
Query: 280 VLWTTIISGYAEKGFMKEATVLYDK-MEEAGLKPDDGVLISILTACAESGMLGLGKKIHA 338
T+II GYA G +A L+ + + E L D+ L IL C G +G +IH
Sbjct: 486 KATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHC 545
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+ + + N+ I MYAKC D A IF+ M + D++SWNS+I + + G+
Sbjct: 546 YALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLISCYILQRNGD 604
Query: 399 KALELFSSMVHEGFEPDKYTFIGLLCAC--THAGLVDKGRNYFNSMEKVYGIVPQIEHYG 456
+AL L+S M + +PD T ++ A T + + R+ F SM+ +Y I P EHY
Sbjct: 605 EALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYT 664
Query: 457 CMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPS 516
+ +L G LEEA + + SMPV+P V+ LL +CR+H++ +A+ +++ + P
Sbjct: 665 AFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPE 724
Query: 517 DPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPK 576
P + L SNIY+ +G W +R +M+ G +K S I F D SHP+
Sbjct: 725 TPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQ 784
Query: 577 SDDIYQMIGRLVHDLRQVGYVPG 599
DIY+ + L+ + +VGY P
Sbjct: 785 EKDIYRGLEILIMECLKVGYEPN 807
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 194/449 (43%), Gaps = 47/449 (10%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
++++ K +HA LK + + LI+ + A+ VF + P V Y +LI
Sbjct: 95 DVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALIS 153
Query: 91 AHA-LNGSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFG 148
+ LN +L FF M++ G V P+ +T+ +L AC S L IH + K G
Sbjct: 154 GFSRLNLEIEAL--KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSG 211
Query: 149 FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKL 208
F +FV NSL+ Y + G D ++LF + +RD +WN+++ LV+ G AF L
Sbjct: 212 FLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDL 271
Query: 209 FDEMPE----------------------------------------RDMVSWNTMLDGYA 228
F EM +++ N ++ Y+
Sbjct: 272 FYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYS 331
Query: 229 KAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISG 288
K +M K L++ M+ + ++++ M+ Y G +D A +F EKN + + +++G
Sbjct: 332 KFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAG 391
Query: 289 YAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCS 348
+ G +A L+ M + G++ D L S + AC + ++IH + +
Sbjct: 392 FCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFN 451
Query: 349 TKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLV-SWNSMIHGFGVHGQGEKALELF-SS 406
+ A +DM +C + A +F + D + S+I G+ +G +KA+ LF +
Sbjct: 452 PCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRT 511
Query: 407 MVHEGFEPDKYTFIGLLCACTHAGLVDKG 435
+ + D+ + +L C G + G
Sbjct: 512 LCEQKLFLDEVSLTLILAVCGTLGFREMG 540
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 122/247 (49%), Gaps = 9/247 (3%)
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL- 310
+ ++ Y + G A ++F +V +T +ISG++ EA ++ +M +AGL
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAK---CGCLDA 367
+P++ ++ILTAC LG +IH + + F S V N+ + +Y K C D
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSC-DD 236
Query: 368 AFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH-EGFEPDKYTFIGLLCAC 426
+F ++ ++D+ SWN+++ G+ KA +LF M EGF D +T LL +C
Sbjct: 237 VLKLFDEIP-QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
Query: 427 THAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIV 486
T + ++ +GR ++ G++ ++ +I S+ +++ E L M + +A+
Sbjct: 296 TDSSVLLRGRELHGRAIRI-GLMQELSVNNALIGFYSKFWDMKKV-ESLYEMMMAQDAVT 353
Query: 487 VGTLLGA 493
++ A
Sbjct: 354 FTEMITA 360
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/554 (29%), Positives = 274/554 (49%), Gaps = 21/554 (3%)
Query: 17 RLLEEKLCTLHRCSNLDLVKQ---IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNV 73
R LE C CSNL +K+ +H +K L +V + + +S + S A
Sbjct: 231 RTLE---CGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLS 287
Query: 74 FNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSS 133
F ++ ++ + S+I + A +G +F F+ MQ +G++PD L+
Sbjct: 288 FRELGDEDMFSWTSIIASLARSGDMEE-SFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 134 LPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAM-EERDAVTWNSM 192
+P + H V + F D V NSL+ Y C + A +LF + EE + WN+M
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMY--CKFELLSVAEKLFCRISEEGNKEAWNTM 404
Query: 193 IGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGE--MNKAFELF--DRML 244
+ G + +LF ++ E D S +++ + G + K+ + L
Sbjct: 405 LKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSL 464
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
I ++++ Y + GD+ +A +F + + N++ W +I+ Y ++A L+D+
Sbjct: 465 DLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDR 523
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
M KP L+++L AC +G L G+ IH + + + A IDMYAKCG
Sbjct: 524 MVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGH 583
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
L+ + +F +KD V WN MI G+G+HG E A+ LF M +P TF+ LL
Sbjct: 584 LEKSRELFDA-GNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Query: 425 ACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNA 484
ACTHAGLV++G+ F M + Y + P ++HY C++DLLSR G+LEEA + SMP P+
Sbjct: 643 ACTHAGLVEQGKKLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDG 701
Query: 485 IVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQM 544
++ GTLL +C H + E+ ++E P + G + +L+N+Y+ AG W R M
Sbjct: 702 VIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
Query: 545 KNAGGQKPSGASSI 558
+ +G K +G S +
Sbjct: 762 RESGVGKRAGHSVV 775
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 149/572 (26%), Positives = 271/572 (47%), Gaps = 60/572 (10%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
+L+ +++ +A ++ L ++++VA KLI++++ + + VF+ V ++ L+NS+I+
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIK 98
Query: 91 AHALNGSHP-SLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFG- 148
AH NG + SL F FF M G PD+FT P ++ AC + +H V K G
Sbjct: 99 AHFSNGDYARSLCF--FFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGG 156
Query: 149 FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAF-- 206
F + V S + YS+CG + A +F M +RD V W ++I G V+ G+ +G
Sbjct: 157 FDRNTAVGASFVYFYSKCGF--LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGY 214
Query: 207 --KLFDEMPERDMVSWNTMLDGYA--------KAGEMNKAFELFDRMLQWNIISWSTMVC 256
K+ + D + T+ G+ K G F + + + + S+M
Sbjct: 215 LCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ-SSMFS 273
Query: 257 GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
YS++G+ A + F + ++++ WT+II+ A G M+E+ ++ +M+ G+ PD V
Sbjct: 274 FYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVV 333
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
+ ++ + ++ GK H V R F + V N+ + MY K L A +F +++
Sbjct: 334 ISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRIS 393
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
+ + +WN+M+ G+G K +ELF + + G E D + ++ +C+H G V G+
Sbjct: 394 EEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGK 453
Query: 437 NYF-----NSMEKVYGIVPQ-IEHYGCMIDL--------------------LSRGGHLEE 470
+ S++ +V I+ YG M DL ++ H E+
Sbjct: 454 SLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQ 513
Query: 471 A------FELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSL- 523
+ F+ + S +P++I + TLL AC N L R H + N SL
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACV--NTGSLERGQMIHRYITETEHEMNLSLS 571
Query: 524 --LSNIYAQAGDWMNVASVRLQMKNAGGQKPS 553
L ++YA+ G ++ R ++ +AG QK +
Sbjct: 572 AALIDMYAKCG---HLEKSR-ELFDAGNQKDA 599
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/505 (30%), Positives = 251/505 (49%), Gaps = 51/505 (10%)
Query: 99 PSLTFSTFFHMQR-EGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPN 157
PS +STF Q + P + L + P+ + IHA + K GF D+ +
Sbjct: 15 PSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAP-KAGKKIHADIIKTGFQPDLNISI 73
Query: 158 SLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP---- 213
L+ + +CG + A ++F + + +N MI G ++ G + L M
Sbjct: 74 KLLILHLKCGCLSY--ARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGE 131
Query: 214 ----------------------------------------ERDMVSWNTMLDGYAKAGEM 233
E D V ++D Y K+G++
Sbjct: 132 KADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKL 191
Query: 234 NKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKG 293
A +F+ M N++ ++M+ GY G ++ A +F+ K++V++ ++ G++ G
Sbjct: 192 ESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSG 251
Query: 294 FMKEATV-LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL 352
+ +V +Y M+ AG P+ S++ AC+ +G+++HA + + K+
Sbjct: 252 ETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMG 311
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGF 412
++ +DMYAKCG ++ A +F +M +K++ SW SMI G+G +G E+ALELF+ M
Sbjct: 312 SSLLDMYAKCGGINDARRVFDQMQ-EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRI 370
Query: 413 EPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAF 472
EP+ TF+G L AC+H+GLVDKG F SM++ Y + P++EHY C++DL+ R G L +AF
Sbjct: 371 EPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAF 430
Query: 473 ELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKL-VPSDPGNFSLLSNIYAQA 531
E R+MP P++ + LL +C +H +VELA + LFKL PG + LSN+YA
Sbjct: 431 EFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASN 490
Query: 532 GDWMNVASVRLQMKNAGGQKPSGAS 556
W NV+ +R MK K G S
Sbjct: 491 DKWDNVSKIREVMKRRRISKTIGRS 515
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 201/419 (47%), Gaps = 53/419 (12%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
K+IHA ++K DL ++ KL+ C +S A VF+++P P + YN +I + +
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKH 113
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSS---LP--LVQMIHAHVEKFGFY 150
G L M G D +T +LKA S LP L +++HA + K
Sbjct: 114 GLVKELLL-LVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
D + +L+D+Y + G ++ A +F M++ + V SMI G + G ++ A ++F+
Sbjct: 173 LDDVLITALVDTYVKSGK--LESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFN 230
Query: 211 EMPERDMVSWNTMLDGYAKAGEMNK-AFELFDRMLQW----NIISWSTMV--CG------ 257
+D+V +N M++G++++GE K + +++ M + NI ++++++ C
Sbjct: 231 TTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHE 290
Query: 258 ---------------------------YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
Y++ G ++ AR +FD+ EKN+ WT++I GY
Sbjct: 291 VGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYG 350
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR-CRFRCST 349
+ G +EA L+ +M+E ++P+ + L+AC+ SG++ G +I S+QR +
Sbjct: 351 KNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKM 410
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE----KALELF 404
+ +D+ + G L+ AF M + D W +++ +HG E A ELF
Sbjct: 411 EHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELF 469
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 144/289 (49%), Gaps = 12/289 (4%)
Query: 67 ISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLK 126
+ A +FN ++ +YN+++ + +G + + MQR G +P+ T+ ++
Sbjct: 222 VEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIG 281
Query: 127 ACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDA 186
AC+ +S + Q +HA + K G Y I + +SL+D Y++CG GI+ A R+F M+E++
Sbjct: 282 ACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCG--GINDARRVFDQMQEKNV 339
Query: 187 VTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDR 242
+W SMI G + G+ + A +LF M E + V++ L + +G ++K +E+F+
Sbjct: 340 FSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFES 399
Query: 243 M-----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK-NLVLWTTIISGYAEKGFMK 296
M ++ + ++ +V RAGD++ A PE+ + +W ++S G ++
Sbjct: 400 MQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVE 459
Query: 297 EATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRF 345
A++ ++ + G +++ A + KI ++R R
Sbjct: 460 LASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRI 508
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 127/336 (37%), Positives = 198/336 (58%), Gaps = 4/336 (1%)
Query: 227 YAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTII 286
Y G M A ++FD M + N ++W+ M+ G + GD + A +K P + +V WTTII
Sbjct: 168 YLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTII 227
Query: 287 SGYAEKGFMKEATVLYDKMEEA-GLKPDDGVLISILTACAESGMLGLGKKIHASV-QRCR 344
GYA KEA +L+ +M +KP++ +++IL A G L + +HA V +R
Sbjct: 228 DGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGF 287
Query: 345 FRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM-TGKKDLVSWNSMIHGFGVHGQGEKALEL 403
C +V N+ ID YAKCGC+ +AF F ++ G+K+LVSW +MI F +HG G++A+ +
Sbjct: 288 VPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSM 347
Query: 404 FSSMVHEGFEPDKYTFIGLLCACTHAGLVDKG-RNYFNSMEKVYGIVPQIEHYGCMIDLL 462
F M G +P++ T I +L AC+H GL ++ +FN+M Y I P ++HYGC++D+L
Sbjct: 348 FKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDML 407
Query: 463 SRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFS 522
R G LEEA ++ +P+E A+V LLGAC +++D ELA ++ L +L S G++
Sbjct: 408 RRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYV 467
Query: 523 LLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
L+SNI+ G +++ R QM G K G S +
Sbjct: 468 LMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 188/427 (44%), Gaps = 82/427 (19%)
Query: 30 SNLDLVKQIHAQLLKAH---LHQD-----LYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
SNL ++ Q+H+ + LHQ L++ L+ +SL + P
Sbjct: 48 SNLKIIHQLHSHFTTSGFLLLHQKQNSGKLFLFNPLLRCYSL-----------GETPLHA 96
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP-DNFTYPFLLKACTGPS--SLPLVQ 138
LY+ L R H L+ + SL P D+FTY FLLKA + P SL L
Sbjct: 97 YFLYDQLQRLHFLSDHNKSLP-------------PFDSFTYLFLLKASSNPRFPSLLLGI 143
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVR 198
+H K GF ++V +L+ Y GG ID A ++F M ER+ VTWN MI GL
Sbjct: 144 GLHGLTLKLGFESHVYVQTALVGMY-LVGGNMID-AHKVFDEMPERNPVTWNVMITGLTN 201
Query: 199 GGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ------------- 245
GD + A ++MP R +VSW T++DGYA+ + +A LF RM+
Sbjct: 202 LGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILA 261
Query: 246 -----WN-----------------------IISWSTMVCGYSRAGDMDMARMLFDKCP-- 275
WN I ++++ Y++ G + A F + P
Sbjct: 262 ILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNG 321
Query: 276 EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGML--GLG 333
KNLV WTT+IS +A G KEA ++ ME GLKP+ +IS+L AC+ G+
Sbjct: 322 RKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFL 381
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGV 393
+ + V + K +DM + G L+ A I ++ ++ V W ++ V
Sbjct: 382 EFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSV 441
Query: 394 HGQGEKA 400
+ E A
Sbjct: 442 YDDAELA 448
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 253/537 (47%), Gaps = 13/537 (2%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
++ + CR + A +F+++ N ++I A+A G F M G P
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDK-AVGLFSGMLASGDKP 182
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
+ Y LLK+ P +L + IHAHV + G + + +++ Y +CG + GA R
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW--LVGAKR 240
Query: 177 LFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF----DEMPERDMVSWNTMLDGYAKAGE 232
+F M + V ++ G + G A KLF E E D ++ +L A E
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 233 MNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISG 288
+N ++ + L+ + + +V Y + + A F + E N V W+ IISG
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 289 YAEKGFMKEATVLYDKMEEAGLKP-DDGVLISILTACAESGMLGLGKKIHASVQRCRFRC 347
Y + +EA + + + SI AC+ +G ++HA +
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 348 STKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSM 407
S +A I MY+KCGCLD A +F M D+V+W + I G +G +AL LF M
Sbjct: 421 SQYGESALITMYSKCGCLDDANEVFESMDNP-DIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 408 VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGH 467
V G +P+ TFI +L AC+HAGLV++G++ ++M + Y + P I+HY CMID+ +R G
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 468 LEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNI 527
L+EA + +++MP EP+A+ L C H ++EL E L +L P D + L N+
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599
Query: 528 YAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMI 584
Y AG W A + M +K S I F V D HP++ +IY+ +
Sbjct: 600 YTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKL 656
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 179/383 (46%), Gaps = 19/383 (4%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
LD +QIHA +++A L + + ++ + C + A VF+Q+ L+
Sbjct: 200 LDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
+ G F + EGV D+F + +LKAC L L + IHA V K G
Sbjct: 260 YTQAGRARD-ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLES 318
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
++ V L+D Y +C + A R F + E + V+W+++I G + + A K F
Sbjct: 319 EVSVGTPLVDFYIKCS--SFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKS 376
Query: 212 MPERDM-----VSWNTMLDGYAKAGEMNKAFELFDRMLQWNII----SWSTMVCGYSRAG 262
+ ++ ++ ++ + + N ++ ++ ++I S ++ YS+ G
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCG 436
Query: 263 DMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILT 322
+D A +F+ ++V WT ISG+A G EA L++KM G+KP+ I++LT
Sbjct: 437 CLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLT 496
Query: 323 ACAESGMLGLGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKKD 380
AC+ +G++ GK ++ R ++ + + + ID+YA+ G LD A M + D
Sbjct: 497 ACSHAGLVEQGKHCLDTMLR-KYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPD 555
Query: 381 LVSWNSMIHGFGVHGQGEKALEL 403
+SW + G H K LEL
Sbjct: 556 AMSWKCFLSGCWTH----KNLEL 574
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/509 (23%), Positives = 213/509 (41%), Gaps = 67/509 (13%)
Query: 75 NQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSL 134
Q N+HL SL + LN + F M + GV +++Y L +AC SL
Sbjct: 46 KQGQVENLHLV-SLSKHRKLNEA-----FEFLQEMDKAGVSVSSYSYQCLFEACRELRSL 99
Query: 135 PLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIG 194
+++H + + + N ++ Y C ++ A +LF M E +AV+ +MI
Sbjct: 100 SHGRLLHDRMRMGIENPSVLLQNCVLQMYCECR--SLEDADKLFDEMSELNAVSRTTMIS 157
Query: 195 GLVRGGDLDGAFKLFDEM------PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI 248
G LD A LF M P M + T+L ++ ++ +++ +
Sbjct: 158 AYAEQGILDKAVGLFSGMLASGDKPPSSM--YTTLLKSLVNPRALDFGRQIHAHVIRAGL 215
Query: 249 ISWSTMVCG----YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
S +++ G Y + G + A+ +FD+ K V T ++ GY + G ++A L+
Sbjct: 216 CSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVD 275
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
+ G++ D V +L ACA L LGK+IHA V + V +D Y KC
Sbjct: 276 LVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSS 335
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEP-DKYTFIGLL 423
++A F ++ D VSW+++I G+ Q E+A++ F S+ + + +T+ +
Sbjct: 336 FESACRAFQEIREPND-VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIF 394
Query: 424 CACT-----------HA------------------------GLVDKGRNYFNSMEKVYGI 448
AC+ HA G +D F SM+
Sbjct: 395 QACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDN---- 450
Query: 449 VPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLLGACRMHNDVELARA 505
P I + I + G+ EA FE + S ++PN++ +L AC VE +
Sbjct: 451 -PDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 509
Query: 506 LSEHLFKLVPSDP--GNFSLLSNIYAQAG 532
+ + + P ++ + +IYA++G
Sbjct: 510 CLDTMLRKYNVAPTIDHYDCMIDIYARSG 538
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 19/228 (8%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q+HA +K L Y LI +S C + A VF + P++ + + I HA G
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYG 467
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM----IHAHVEKFGFYED 152
+ S F M G+ P++ T+ +L AC S LV+ + + K+
Sbjct: 468 -NASEALRLFEKMVSCGMKPNSVTFIAVLTAC---SHAGLVEQGKHCLDTMLRKYNVAPT 523
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAME-ERDAVTWNSMIGGLVRGGDL---DGAFKL 208
I + +ID Y+R G +D A++ M E DA++W + G +L + A +
Sbjct: 524 IDHYDCMIDIYARSG--LLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEE 581
Query: 209 FDEMPERDMVSWNTMLDGYAKAGEMNKAFELF----DRMLQWNI-ISW 251
++ D + + Y AG+ +A E+ +RML+ + SW
Sbjct: 582 LRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSW 629
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 149/489 (30%), Positives = 255/489 (52%), Gaps = 15/489 (3%)
Query: 120 TYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFS 179
TY L++AC S+ V+ ++ + GF + ++ N ++ + +CG + ID A RLF
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMI-ID-ARRLFD 182
Query: 180 AMEERDAVTWNSMIGGLVRGGDLDGAFKLF----DEMPERDMVSWNTMLDGYAKAGEMNK 235
+ ER+ ++ S+I G V G+ AF+LF +E+ + + ++ ML A G +
Sbjct: 183 EIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYV 242
Query: 236 AFELFDRMLQWNIISWSTMVCG----YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAE 291
+L L+ ++ + + CG YS+ GD++ AR F+ PEK V W +I+GYA
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYAL 302
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
G+ +EA L M ++G+ D L ++ + L L K+ HAS+ R F
Sbjct: 303 HGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
A +D Y+K G +D A +F K+ +K+++SWN+++ G+ HG+G A++LF M+
Sbjct: 363 NTALVDFYSKWGRVDTARYVFDKLP-RKNIISWNALMGGYANHGRGTDAVKLFEKMIAAN 421
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
P+ TF+ +L AC ++GL ++G F SM +V+GI P+ HY CMI+LL R G L+EA
Sbjct: 422 VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEA 481
Query: 472 FELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQA 531
+R P++ + LL ACRM ++EL R ++E L+ + P GN+ ++ N+Y
Sbjct: 482 IAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSM 541
Query: 532 GDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFD----HSHPKSDDIYQMIGRL 587
G A V +++ G + + F D ++ IYQ + L
Sbjct: 542 GKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDEL 601
Query: 588 VHDLRQVGY 596
+ ++ + GY
Sbjct: 602 MEEISEYGY 610
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 173/372 (46%), Gaps = 12/372 (3%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
R ++ VK+++ ++ + Y+ +++ C I A +F+++P N++ Y S
Sbjct: 135 RLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYS 194
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
+I G++ F F M E + T+ +L+A G S+ + + +H K
Sbjct: 195 IISGFVNFGNYVE-AFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKL 253
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
G ++ FV LID YS+CG I+ A F M E+ V WN++I G G + A
Sbjct: 254 GVVDNTFVSCGLIDMYSKCG--DIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALC 311
Query: 208 LFDEMPER----DMVSWNTMLDGYAKAGEMNKAFE----LFDRMLQWNIISWSTMVCGYS 259
L +M + D + + M+ K ++ + L + I++ + +V YS
Sbjct: 312 LLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYS 371
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
+ G +D AR +FDK P KN++ W ++ GYA G +A L++KM A + P+ ++
Sbjct: 372 KWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLA 431
Query: 320 ILTACAESGMLGLGKKIHASVQRCR-FRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
+L+ACA SG+ G +I S+ + I++ + G LD A + K
Sbjct: 432 VLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK 491
Query: 379 KDLVSWNSMIHG 390
+ W ++++
Sbjct: 492 TTVNMWAALLNA 503
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 138/288 (47%), Gaps = 15/288 (5%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
KQ+H LK + + +V+ LI +S C I A F +P +N++I +AL+
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
G + + M+ GV D FT +++ T + L L + HA + + GF +I
Sbjct: 304 G-YSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVA 362
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
+L+D YS+ G V D A +F + ++ ++WN+++GG G A KLF++M
Sbjct: 363 NTALVDFYSKWGRV--DTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAA 420
Query: 216 DM----VSWNTMLDGYAKAGEMNKAFELFDRM-----LQWNIISWSTMVCGYSRAGDMDM 266
++ V++ +L A +G + +E+F M ++ + ++ M+ R G +D
Sbjct: 421 NVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDE 480
Query: 267 ARMLFDKCPEKNLV-LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
A + P K V +W +++ + ++ V+ +K+ G+ P+
Sbjct: 481 AIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKL--YGMGPE 526
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 255/480 (53%), Gaps = 19/480 (3%)
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
S ++ + +H G ++ F+ + L++ + + A+++F + + WN++
Sbjct: 15 SFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAI 74
Query: 193 IGGLVRGGDLDGAFKLFDEMPER----------DMVSWNTMLDGYAKA---GEMNKAF-E 238
I G AF + M ++ D ++ + L A+A M++ +
Sbjct: 75 IRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQ 134
Query: 239 LFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEA 298
+ R L + + +T++ YS+ GD+ A LFD+ P +++ W +I+G EA
Sbjct: 135 INRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEA 194
Query: 299 TVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDM 358
LY +ME G++ + +++ L AC+ G + G+ I + V NA IDM
Sbjct: 195 MELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND----NVIVSNAAIDM 250
Query: 359 YAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
Y+KCG +D A+ +F + TGKK +V+WN+MI GF VHG+ +ALE+F + G +PD +
Sbjct: 251 YSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVS 310
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
++ L AC HAGLV+ G + FN+M G+ ++HYGC++DLLSR G L EA +++ SM
Sbjct: 311 YLAALTACRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSM 369
Query: 479 PVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVA 538
+ P+ ++ +LLGA +++DVE+A S + ++ ++ G+F LLSN+YA G W +V
Sbjct: 370 SMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVG 429
Query: 539 SVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
VR M++ +K G S I F D SH + +IY+ I + +R+ GYV
Sbjct: 430 RVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVA 489
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 191/398 (47%), Gaps = 17/398 (4%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLI--AAFSLCRHISSAVNVFNQVPYPNVH 83
+ +C + +KQ+ + L A Q ++ +L+ A S +S AV +F +P P +
Sbjct: 10 IQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTN 69
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP------DNFTYPFLLKACTGPSSLPLV 137
+N++IR A SHPSL FS + M ++ D T F LKAC +
Sbjct: 70 DWNAIIRGFA-GSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAM 128
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLV 197
+H + + G D + +L+D+YS+ G + A +LF M RD +WN++I GLV
Sbjct: 129 DQLHCQINRRGLSADSLLCTTLLDAYSKNG--DLISAYKLFDEMPVRDVASWNALIAGLV 186
Query: 198 RGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWST 253
G A +L+ M R V+ L + G++ + +F N+I +
Sbjct: 187 SGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNA 246
Query: 254 MVCGYSRAGDMDMARMLFDK-CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP 312
+ YS+ G +D A +F++ +K++V W T+I+G+A G A ++DK+E+ G+KP
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
DD ++ LTAC +G++ G + ++ + K +D+ ++ G L A I
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDII 366
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
M+ D V W S++ ++ E A E+ S + E
Sbjct: 367 CSMSMIPDPVLWQSLLGASEIYSDVEMA-EIASREIKE 403
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/540 (30%), Positives = 265/540 (49%), Gaps = 19/540 (3%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
+C + + +H K+ L D V LI+ +S C + SA +F ++ + +N+
Sbjct: 163 QCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNT 222
Query: 88 LIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
+I A++ +G + F +M + V T LL A S PL H V K
Sbjct: 223 MIGAYSQSGLQEE-AITVFKNMFEKNVEISPVTIINLLSA--HVSHEPL----HCLVVKC 275
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
G DI V SL+ +YSRCG + A RL+++ ++ V S++ GD+D A
Sbjct: 276 GMVNDISVVTSLVCAYSRCGC--LVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVV 333
Query: 208 LFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG----YS 259
F + + D V+ +L G K+ ++ L ++ + + + +V G YS
Sbjct: 334 YFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYS 393
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEA-TVLYDKMEEAGLKPDDGVLI 318
+ D++ LF++ E L+ W ++ISG + G A V + M GL PD +
Sbjct: 394 KFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIA 453
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
S+L C++ L LGK++H R F V A IDMYAKCG A +F +
Sbjct: 454 SLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 513
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY 438
+WNSMI G+ + G +AL + M +G +PD+ TF+G+L AC H G VD+G+
Sbjct: 514 CT-ATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKIC 572
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
F +M K +GI P ++HY M+ LL R EA L+ M ++P++ V G LL AC +H
Sbjct: 573 FRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHR 632
Query: 499 DVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
++E+ ++ +F L + G + L+SN+YA W +V VR MK+ G G S I
Sbjct: 633 ELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 219/460 (47%), Gaps = 22/460 (4%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
V+Q+ L K+ L + +YV L+ + ++SA +F+++P + ++N+LI ++
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSR 128
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
NG + + F M ++G P T LL C + + +H K G D
Sbjct: 129 NG-YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
V N+LI YS+C +G A LF M+++ V+WN+MIG + G + A +F M E
Sbjct: 188 VKNALISFYSKCAELG--SAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFE 245
Query: 215 RDM-VSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWST-MVCGYSRAGDMDMARMLFD 272
+++ +S T+++ + L + N IS T +VC YSR G + A L+
Sbjct: 246 KNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYA 305
Query: 273 KCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGL 332
+ ++V T+I+S YAEKG M A V + K + +K D L+ IL C +S + +
Sbjct: 306 SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDI 365
Query: 333 GKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFG 392
G +H + T V+N I MY+K ++ +F ++ + L+SWNS+I G
Sbjct: 366 GMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ-ETPLISWNSVISGCV 424
Query: 393 VHGQGEKALELFSSMVHE-GFEPDKYTFIGLLCACTHAGLVDKGRNYF-----NSMEKVY 446
G+ A E+F M+ G PD T LL C+ ++ G+ N+ E
Sbjct: 425 QSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFEN-- 482
Query: 447 GIVPQIEHYGC--MIDLLSRGGHLEEAFELLRSMPVEPNA 484
E++ C +ID+ ++ G+ +A + +S+ A
Sbjct: 483 ------ENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTA 516
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 229/521 (43%), Gaps = 73/521 (14%)
Query: 79 YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGP-SSLPL- 136
Y ++ ++SL+++ ++G S + F + R + P++FT L+A T +S L
Sbjct: 10 YRDLSYFHSLLKS-CIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQ 68
Query: 137 VQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGL 196
V+ + H+ K G ++V SL++ Y + G V A LF M ERD V WN++I G
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCV--TSAQMLFDEMPERDTVVWNALICGY 126
Query: 197 VRGGDLDGAFKLFDEMPERDMVSWNTML--------------DGYAKAGEMNKAFELFDR 242
R G A+KLF M ++ T L G + G K+ D
Sbjct: 127 SRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDS 186
Query: 243 MLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLY 302
++ +IS+ YS+ ++ A +LF + +K+ V W T+I Y++ G +EA ++
Sbjct: 187 QVKNALISF------YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVF 240
Query: 303 DKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKC 362
M E ++ +I++L+A + +H V +C V+ + + Y++C
Sbjct: 241 KNMFEKNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMVNDISVVTSLVCAYSRC 294
Query: 363 GCLDAAFGIFSKMTGKKD-LVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIG 421
GCL +A +++ + K+D +V S++ + G + A+ FS + D +G
Sbjct: 295 GCLVSAERLYA--SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVG 352
Query: 422 LLCACTHAGLVDKGRNY-------------------------FNSMEKVYGIVPQIEH-- 454
+L C + +D G + F+ +E V + Q++
Sbjct: 353 ILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP 412
Query: 455 ---YGCMIDLLSRGGHLEEAFELLRSMPVE----PNAIVVGTLLGACRMHNDVELARALS 507
+ +I + G AFE+ M + P+AI + +LL C + L + L
Sbjct: 413 LISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKEL- 471
Query: 508 EHLFKLVPS-DPGNF--SLLSNIYAQAGDWMNVASVRLQMK 545
H + L + + NF + L ++YA+ G+ + SV +K
Sbjct: 472 -HGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK 511
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 165/606 (27%), Positives = 285/606 (47%), Gaps = 90/606 (14%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISS-AVNVFNQVPYPNVHLYNSLIRAHALN 95
+ H +K L ++++V L++ ++ C I V VF + PN Y ++I A
Sbjct: 159 RCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARE 218
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLL------KACTGPSSL---PLVQMIHAHVEK 146
F M +GV D+ +L + C S + L + IH +
Sbjct: 219 NKVLE-AVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALR 277
Query: 147 FGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMI------------- 193
GF D+ + NSL++ Y++ ++GA +F+ M E + V+WN MI
Sbjct: 278 LGFGGDLHLNNSLLEIYAK--NKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSV 335
Query: 194 ----------------------GGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAG 231
G R GD++ ++F +P+ + +WN ML GY+
Sbjct: 336 EFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYE 395
Query: 232 EMNKAFELFDRM-----------------------------------LQWNIISWSTMVC 256
+A F +M ++ I S +V
Sbjct: 396 HYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVS 455
Query: 257 G----YSRAGDMDMARMLFDKC-PEKNLVLWTTIISGYAEKGFMKEATVLYDKMEE-AGL 310
G YS M+++ +FD C E ++ W ++ISG+ +A +L+ +M + A L
Sbjct: 456 GLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVL 515
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
P++ ++L++C+ L G++ H V + + + V A DMY KCG +D+A
Sbjct: 516 CPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQ 575
Query: 371 IFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG 430
F + +K+ V WN MIHG+G +G+G++A+ L+ M+ G +PD TF+ +L AC+H+G
Sbjct: 576 FFDAVL-RKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSG 634
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTL 490
LV+ G +SM++++GI P+++HY C++D L R G LE+A +L + P + ++++ L
Sbjct: 635 LVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEIL 694
Query: 491 LGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQ 550
L +CR+H DV LAR ++E L +L P + LLSN Y+ W + A+++ M
Sbjct: 695 LSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVH 754
Query: 551 KPSGAS 556
K G S
Sbjct: 755 KTPGQS 760
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 193/409 (47%), Gaps = 60/409 (14%)
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLV 197
++IH + + G D ++ N L+D Y CG D A ++F M RD +WN+ +
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDG--DYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 198 RGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM-------------- 243
+ GDL A ++FD MPERD+VSWN M+ + G KA ++ RM
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 244 -------------------------LQWNIISWSTMVCGYSRAG-DMDMARMLFDKCPEK 277
L NI + ++ Y++ G +D +F+ +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 278 NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE-------SGML 330
N V +T +I G A + + EA ++ M E G++ D L +IL+ A S +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 331 G--LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
G LGK+IH R F + N+ +++YAK ++ A IF++M + ++VSWN MI
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP-EVNVVSWNIMI 322
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGI 448
GFG + +K++E + M GF+P++ T I +L AC +G V+ GR F+S+ +
Sbjct: 323 VGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ---- 378
Query: 449 VPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGAC 494
P + + M+ S H EEA R M ++P+ + +L +C
Sbjct: 379 -PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSC 426
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 48/338 (14%)
Query: 221 NTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
N +LD Y + G+ + A ++FD M ++ SW+ + + GD+ A +FD PE+++V
Sbjct: 45 NRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVV 104
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
W +IS KGF ++A V+Y +M G P L S+L+AC++ G + H
Sbjct: 105 SWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVA 164
Query: 341 QRCRFRCSTKVLNAFIDMYAKCG-CLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEK 399
+ + V NA + MYAKCG +D +F ++ + + VS+ ++I G + +
Sbjct: 165 VKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS-QPNEVSYTAVIGGLARENKVLE 223
Query: 400 ALELFSSMVHEGFEPDKYTFIGLL-------------------------CACTHAGL--- 431
A+++F M +G + D +L C G
Sbjct: 224 AVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGD 283
Query: 432 ---------VDKGRNYFNSMEKVYGIVPQIE--HYGCMIDLLSRGGHLEEAFELL---RS 477
+ N E ++ +P++ + MI + +++ E L R
Sbjct: 284 LHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRD 343
Query: 478 MPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVP 515
+PN + ++LGAC DVE R +F +P
Sbjct: 344 SGFQPNEVTCISVLGACFRSGDVETGR----RIFSSIP 377
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 179/446 (40%), Gaps = 92/446 (20%)
Query: 33 DLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAH 92
+L KQIH L+ DL++ L+ ++ + ++ A +F ++P NV +N +I
Sbjct: 266 ELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGF 325
Query: 93 ALN-GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKAC-------TGP---SSLPL--VQM 139
S S+ F T M+ G P+ T +L AC TG SS+P V
Sbjct: 326 GQEYRSDKSVEFLT--RMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSA 383
Query: 140 IHAHVEKFGFYE-------------------DIFVPNSLIDSYSRC----GGVGIDGAMR 176
+A + + YE D + ++ S +R GG I G +
Sbjct: 384 WNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVI 443
Query: 177 LFSAMEERDAVTWNS-MIGGLV----RGGDLDGAFKLFDE-MPERDMVSWNTMLDGYAKA 230
R ++ NS ++ GL+ ++ + +FD+ + E D+ WN+M+ G+
Sbjct: 444 -------RTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHN 496
Query: 231 GEMNKAFELFDRMLQW-----------NIISWSTMVCG---------------------- 257
KA LF RM Q ++S + +C
Sbjct: 497 MLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFV 556
Query: 258 -------YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
Y + G++D AR FD KN V+W +I GY G EA LY KM +G
Sbjct: 557 ETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGE 616
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCR-FRCSTKVLNAFIDMYAKCGCLDAAF 369
KPD +S+LTAC+ SG++ G +I +S+QR +D + G L+ A
Sbjct: 617 KPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAE 676
Query: 370 GIFSKMTGKKDLVSWNSMIHGFGVHG 395
+ K V W ++ VHG
Sbjct: 677 KLAEATPYKSSSVLWEILLSSCRVHG 702
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 18/295 (6%)
Query: 26 LHRCSNLDLV---KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQ-VPYPN 81
L C+ L + KQIH +++ + ++ ++ LIA +S C + + +F+ + +
Sbjct: 423 LSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELD 482
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVY-PDNFTYPFLLKACTGPSSLPLVQMI 140
+ +NS+I N + F M + V P+ ++ +L +C+ SL +
Sbjct: 483 IACWNSMISGFRHN-MLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQF 541
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
H V K G+ D FV +L D Y +CG ID A + F A+ ++ V WN MI G G
Sbjct: 542 HGLVVKSGYVSDSFVETALTDMYCKCG--EIDSARQFFDAVLRKNTVIWNEMIHGYGHNG 599
Query: 201 DLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-----W 251
D A L+ +M + D +++ ++L + +G + E+ M + + I +
Sbjct: 600 RGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHY 659
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEK-NLVLWTTIISGYAEKGFMKEATVLYDKM 305
+V RAG ++ A L + P K + VLW ++S G + A + +K+
Sbjct: 660 ICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKL 714
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 161/576 (27%), Positives = 267/576 (46%), Gaps = 72/576 (12%)
Query: 48 HQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFF 107
+D Y +++ F+ +S A +FN +P +V NSL+ + LNG + F
Sbjct: 121 ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNG-YAEEALRLFK 179
Query: 108 HMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCG 167
+ D T +LKAC +L + IHA + G D + +SL++ Y++CG
Sbjct: 180 ELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCG 236
Query: 168 GVGIDGAMR-----------------------------LFSAMEERDAVTWNSMIGGLVR 198
+ + M LF R + WNSMI G +
Sbjct: 237 DLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIA 296
Query: 199 GGDLDGAFKLFDEMPER--------------------------------------DMVSW 220
A LF+EM D+V
Sbjct: 297 NNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVA 356
Query: 221 NTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
+T+LD Y+K G +A +LF + ++ I ++M+ Y G +D A+ +F++ K+L+
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLI 416
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
W ++ +G+++ G E + +M + L D+ L S+++ACA L LG+++ A
Sbjct: 417 SWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARA 476
Query: 341 QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
V ++ ID+Y KCG ++ +F M K D V WNSMI G+ +GQG +A
Sbjct: 477 TIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMV-KSDEVPWNSMISGYATNGQGFEA 535
Query: 401 LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMID 460
++LF M G P + TF+ +L AC + GLV++GR F SM+ +G VP EH+ CM+D
Sbjct: 536 IDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVD 595
Query: 461 LLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGN 520
LL+R G++EEA L+ MP + + + ++L C + + + +E + +L P +
Sbjct: 596 LLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVA 655
Query: 521 FSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
+ LS I+A +GDW + A VR M+ K G+S
Sbjct: 656 YVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 180/387 (46%), Gaps = 71/387 (18%)
Query: 121 YPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI-FVPNSLIDSYSRCGGVGIDGAMRLFS 179
Y LL++C+ + L + + + K GF I V N L+ YSR G +GI A LF
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGI--ARNLFD 86
Query: 180 AMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFEL 239
M +R+ +WN+MI G + G+ + + FD MPERD SWN ++ G+AKAGE++ A L
Sbjct: 87 EMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRL 146
Query: 240 FDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEAT 299
F+ M PEK++V +++ GY G+ +EA
Sbjct: 147 FNAM-------------------------------PEKDVVTLNSLLHGYILNGYAEEAL 175
Query: 300 VLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMY 359
L+ +E D L ++L ACAE L GK+IHA + C +K+ ++ +++Y
Sbjct: 176 RLF---KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVY 232
Query: 360 AKCGCL-------------------------------DAAFGIFSKMTGKKDLVSWNSMI 388
AKCG L + + G+F + + + ++ WNSMI
Sbjct: 233 AKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRC-VILWNSMI 291
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGI 448
G+ + +AL LF+ M +E E D T ++ AC G ++ G+ K +G+
Sbjct: 292 SGYIANNMKMEALVLFNEMRNETRE-DSRTLAAVINACIGLGFLETGKQMHCHACK-FGL 349
Query: 449 VPQIEHYGCMIDLLSRGGHLEEAFELL 475
+ I ++D+ S+ G EA +L
Sbjct: 350 IDDIVVASTLLDMYSKCGSPMEACKLF 376
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 199/455 (43%), Gaps = 81/455 (17%)
Query: 25 TLHRCSNLDLVK---QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
L C+ L+ +K QIHAQ+L + D + L+ ++ C + A + Q+ P+
Sbjct: 193 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPD 252
Query: 82 VH-------------------------------LYNSLIRAHALNGSHPSLTFSTFFHMQ 110
H L+NS+I + N + + F+
Sbjct: 253 DHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIAN--NMKMEALVLFNEM 310
Query: 111 REGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVG 170
R D+ T ++ AC G L + +H H KFG +DI V ++L+D YS+CG
Sbjct: 311 RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 171 IDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKA 230
A +LFS +E D + NSMI G +D A ++F+ + + ++SWN+M +G+++
Sbjct: 371 --EACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQN 428
Query: 231 GEMNKAFELFDRMLQWNI----ISWSTMVCG----------------------------- 257
G + E F +M + ++ +S S+++
Sbjct: 429 GCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS 488
Query: 258 ------YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
Y + G ++ R +FD + + V W ++ISGYA G EA L+ KM AG++
Sbjct: 489 SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIR 548
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCR-FRCSTKVLNAFIDMYAKCGCLDAAFG 370
P + +LTAC G++ G+K+ S++ F + + +D+ A+ G ++ A
Sbjct: 549 PTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608
Query: 371 IFSKMTGKKDLVSWNSMIHGF---GVHGQGEKALE 402
+ +M D W+S++ G G G+KA E
Sbjct: 609 LVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAE 643
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/443 (30%), Positives = 232/443 (52%), Gaps = 14/443 (3%)
Query: 171 IDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYA-- 228
I+ + R+FS N+MI F+LF + + N + +A
Sbjct: 62 INYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALK 121
Query: 229 ---KAGEMNKAFELFDRMLQWNIIS----WSTMVCGYSRAGDMDMARMLFDKCPEKNLVL 281
K+G++ ++ ++ +S +T++ YS + A +FD+ P+++ V
Sbjct: 122 CCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVS 181
Query: 282 WTTIISGYAEKGFMKEATVLYDKME---EAGLKPDDGVLISILTACAESGMLGLGKKIHA 338
W + S Y ++ VL+DKM+ + +KPD + L ACA G L GK++H
Sbjct: 182 WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD 241
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+ + + N + MY++CG +D A+ +F M ++++VSW ++I G ++G G+
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGFGK 300
Query: 399 KALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK-VYGIVPQIEHYGC 457
+A+E F+ M+ G P++ T GLL AC+H+GLV +G +F+ M + I P + HYGC
Sbjct: 301 EAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGC 360
Query: 458 MIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSD 517
++DLL R L++A+ L++SM ++P++ + TLLGACR+H DVEL + HL +L +
Sbjct: 361 VVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEE 420
Query: 518 PGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKS 577
G++ LL N Y+ G W V +R MK G S+I F V D SHP+
Sbjct: 421 AGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRK 480
Query: 578 DDIYQMIGRLVHDLRQVGYVPGI 600
++IY+M+ + L+ GYV I
Sbjct: 481 EEIYKMLAEINQQLKIAGYVAEI 503
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 182/392 (46%), Gaps = 22/392 (5%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLC---RHISSAVNVFNQVPYPNVHLYNSLIRA 91
++QIHA LL+ L ++ V ++ +L R I+ + VF+Q P + N++IRA
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRA 86
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDN-FTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY 150
+L+ + P F F ++R P N + F LK C L IH + GF
Sbjct: 87 FSLSQT-PCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFL 145
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
D + +L+D YS C A ++F + +RD V+WN + +R LFD
Sbjct: 146 SDSLLMTTLMDLYSTCENS--TDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFD 203
Query: 211 EMP-------ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWS-----TMVCGY 258
+M + D V+ L A G ++ ++ D + N +S + T+V Y
Sbjct: 204 KMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHD-FIDENGLSGALNLSNTLVSMY 262
Query: 259 SRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLI 318
SR G MD A +F E+N+V WT +ISG A GF KEA +++M + G+ P++ L
Sbjct: 263 SRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLT 322
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFSKMT 376
+L+AC+ SG++ G ++ F+ + +D+ + LD A+ + M
Sbjct: 323 GLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSME 382
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMV 408
K D W +++ VHG E + S ++
Sbjct: 383 MKPDSTIWRTLLGACRVHGDVELGERVISHLI 414
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 12/235 (5%)
Query: 23 LCTLHRCSNL---DLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY 79
L L C+NL D KQ+H + + L L ++ L++ +S C + A VF +
Sbjct: 221 LLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRE 280
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
NV + +LI A+NG F M + G+ P+ T LL AC+ + M
Sbjct: 281 RNVVSWTALISGLAMNGFGKE-AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMM 339
Query: 140 IHAHVE--KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER-DAVTWNSMIGGL 196
+ +F ++ ++D R +D A L +ME + D+ W +++G
Sbjct: 340 FFDRMRSGEFKIKPNLHHYGCVVDLLGR--ARLLDKAYSLIKSMEMKPDSTIWRTLLGAC 397
Query: 197 VRGGDLDGAFKLFD---EMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI 248
GD++ ++ E+ + + +L+ Y+ G+ K EL M + I
Sbjct: 398 RVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRI 452
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 159/568 (27%), Positives = 273/568 (48%), Gaps = 48/568 (8%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
KQ HA + + D + L+ + I A VF+++ +V +N +I +
Sbjct: 294 KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQ 353
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
G + M+ E + D T L+ A +L L + + + + F DI +
Sbjct: 354 GLVEDAIYMCQL-MRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
++++D Y++CG + +D A K+FD E+
Sbjct: 413 ASTVMDMYAKCGSI-VD--------------------------------AKKVFDSTVEK 439
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLF 271
D++ WNT+L YA++G +A LF M + N+I+W+ ++ R G +D A+ +F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 272 DKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAES 327
+ NL+ WTT+++G + G +EA + KM+E+GL+P+ + L+ACA
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 328 GMLGLGKKIHASVQRCRFRCS-TKVLNAFIDMYAKCGCLDAAFGIF-SKMTGKKDLVSWN 385
L +G+ IH + R S + + +DMYAKCG ++ A +F SK+ + L N
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS--N 617
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
+MI + ++G ++A+ L+ S+ G +PD T +L AC HAG +++ F +
Sbjct: 618 AMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Query: 446 YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARA 505
+ P +EHYG M+DLL+ G E+A L+ MP +P+A ++ +L+ +C EL
Sbjct: 678 RSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDY 737
Query: 506 LSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS--SIXXXXX 563
LS L + P + GN+ +SN YA G W V +R MK G +K G S I
Sbjct: 738 LSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEG 797
Query: 564 XXXFTVFDHSHPKSDDIYQMIGRLVHDL 591
F D +H + ++I M+ L++D+
Sbjct: 798 VHVFVANDKTHTRINEIQMMLALLLYDM 825
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/526 (28%), Positives = 266/526 (50%), Gaps = 24/526 (4%)
Query: 24 CTLHRCSNLDLVKQIHAQLLKA--HLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
C R +L KQIHA++LK ++ Y+ KL+ ++ C + A +F+++ N
Sbjct: 80 CVYER--DLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRN 137
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
V + ++I G F M ++PDNF P + KAC + +H
Sbjct: 138 VFSWAAIIGVKCRIGLCEG-ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVH 196
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
+V K G + +FV +SL D Y +CG +D A ++F + +R+AV WN+++ G V+ G
Sbjct: 197 GYVVKSGLEDCVFVASSLADMYGKCGV--LDDASKVFDEIPDRNAVAWNALMVGYVQNGK 254
Query: 202 LDGAFKLFDEMPERDM----VSWNTMLDGYA-----KAGEMNKAFELFDRMLQWNIISWS 252
+ A +LF +M ++ + V+ +T L A + G+ + A + + M NI+ +
Sbjct: 255 NEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG-T 313
Query: 253 TMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP 312
+++ Y + G ++ A M+FD+ EK++V W IISGY ++G +++A + M LK
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
D L ++++A A + L LGK++ R F + + +DMYAKCG + A +F
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
T +KDL+ WN+++ + G +AL LF M EG P+ T+ ++ + G V
Sbjct: 434 DS-TVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQV 492
Query: 433 DKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGT 489
D+ ++ F M+ GI+P + + M++ + + G EEA LR M + PNA +
Sbjct: 493 DEAKDMFLQMQS-SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 490 LLGACRMHNDVELARALSEHLFKLV--PSDPGNFSLLSNIYAQAGD 533
L AC + + R + ++ + + S + L ++YA+ GD
Sbjct: 552 ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGD 597
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 286 ISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCR- 344
+S + G +KEA L +M+ L+ + IL C L GK+IHA + +
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 345 -FRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALEL 403
+ + + + YAKC L+ A +FSK+ +++ SW ++I G E AL
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLR-VRNVFSWAAIIGVKCRIGLCEGALMG 160
Query: 404 FSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLS 463
F M+ PD + + AC GR + K G+ + + D+
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVK-SGLEDCVFVASSLADMYG 219
Query: 464 RGGHLEEAFELLRSMP----VEPNAIVVG 488
+ G L++A ++ +P V NA++VG
Sbjct: 220 KCGVLDDASKVFDEIPDRNAVAWNALMVG 248
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 151/507 (29%), Positives = 245/507 (48%), Gaps = 45/507 (8%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
+L L++Q+H ++K ++ + ++ + CR +S A VF+++ P+ +N ++R
Sbjct: 177 DLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVR 236
Query: 91 AHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY 150
+ G + FF M V P N T ++ AC+ +L + ++IHA K
Sbjct: 237 RYLEMGFNDEAVV-MFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVV 295
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
D V S+ D Y +C ++ A R+F +D +W S + G G A +LFD
Sbjct: 296 ADTVVSTSVFDMYVKCDR--LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 211 EMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ-----------W------------- 246
MPER++VSWN ML GY A E ++A + M Q W
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 247 ---------------NIISWSTMVCGYSRAGDMDMARMLFDKCPE-KNLVLWTTIISGYA 290
N+I + ++ Y + G + A + F + E ++ V W +++G A
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVA 473
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
G ++A ++ M+ KP L ++L CA L LGK IH + R ++
Sbjct: 474 RVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVV 532
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
+ A +DMY+KC C D A +F K +DL+ WNS+I G +G+ ++ ELF + +E
Sbjct: 533 IRGAMVDMYSKCRCFDYAIEVF-KEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENE 591
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
G +PD TF+G+L AC G V+ G YF+SM Y I PQ+EHY CMI+L + G L +
Sbjct: 592 GVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQ 651
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMH 497
E L MP +P ++ + AC+ +
Sbjct: 652 LEEFLLLMPFDPPMQMLTRINDACQRY 678
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 228/511 (44%), Gaps = 51/511 (9%)
Query: 29 CSNLDLVKQIHAQLLKAHLHQ-----DLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVH 83
CS+ LV + A+ +++HL +++ + I A+ C + A +F ++P +
Sbjct: 71 CSSKALV--VQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGG 128
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+N++I A A NG + F F M R+GV ++ +LK+C L L++ +H
Sbjct: 129 SWNAVITACAQNGVSDEV-FRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCA 187
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
V K+G+ ++ + S++D Y +C + A R+F + V+WN ++ + G D
Sbjct: 188 VVKYGYSGNVDLETSIVDVYGKCR--VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFND 245
Query: 204 GAFKLFDEMPE---------------------------------------RDMVSWNTML 224
A +F +M E D V ++
Sbjct: 246 EAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVF 305
Query: 225 DGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTT 284
D Y K + A +FD+ ++ SW++ + GY+ +G AR LFD PE+N+V W
Sbjct: 306 DMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNA 365
Query: 285 IISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCR 344
++ GY EA M + D+ L+ IL C+ + +GK+ H + R
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHG 425
Query: 345 FRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELF 404
+ + V NA +DMY KCG L +A F +M+ +D VSWN+++ G G+ E+AL F
Sbjct: 426 YDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF 485
Query: 405 SSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSR 464
M E +P KYT LL C + ++ G+ + + G + G M+D+ S+
Sbjct: 486 EGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIR-DGYKIDVVIRGAMVDMYSK 543
Query: 465 GGHLEEAFELLRSMPVEPNAIVVGTLLGACR 495
+ A E+ + + + G CR
Sbjct: 544 CRCFDYAIEVFKEAATRDLILWNSIIRGCCR 574
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 166/360 (46%), Gaps = 20/360 (5%)
Query: 94 LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
L G + S S F Y + Y L ++C+ + + + + +H+ F I
Sbjct: 40 LEGGNVSKAVSVLFASPEPVSY---WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPI 96
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
F+ N I++Y +CG V D A LF M ERD +WN++I + G D F++F M
Sbjct: 97 FLLNRAIEAYGKCGCV--DDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMN 154
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISW---------STMVCGYSRAGDM 264
+ + T G K+ + L R L ++ + +++V Y + M
Sbjct: 155 RDGVRATETSFAGVLKSCGLILDLRLL-RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVM 213
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
AR +FD+ + V W I+ Y E GF EA V++ KM E ++P + + S++ AC
Sbjct: 214 SDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLAC 273
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
+ S L +GK IHA + T V + DMY KC L++A +F + T KDL SW
Sbjct: 274 SRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQ-TRSKDLKSW 332
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
S + G+ + G +A ELF M E + ++ +L HA D+ ++ M +
Sbjct: 333 TSAMSGYAMSGLTREARELFDLMP----ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQ 388
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 160/507 (31%), Positives = 254/507 (50%), Gaps = 29/507 (5%)
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
FFH++ T FL+ + ++ ++H K GF D F N L+ SY +
Sbjct: 26 FFHLK---------TKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVK 76
Query: 166 CGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMV-----SW 220
I+ A +LF M E + V+W S+I G G A +F +M E V ++
Sbjct: 77 LKE--INTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTF 134
Query: 221 NTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPE 276
++ + E + R+ L+ NI+ S++V Y + D++ AR +FD
Sbjct: 135 ASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIG 194
Query: 277 --KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDG---VLISILTACAESGMLG 331
+N+V WT++I+ YA+ EA L+ A L D +L S+++AC+ G L
Sbjct: 195 YGRNVVSWTSMITAYAQNARGHEAIELFRSFN-AALTSDRANQFMLASVISACSSLGRLQ 253
Query: 332 LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGF 391
GK H V R + +T V + +DMYAKCG L A IF ++ ++S+ SMI
Sbjct: 254 WGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCH-SVISYTSMIMAK 312
Query: 392 GVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQ 451
HG GE A++LF MV P+ T +G+L AC+H+GLV++G Y + M + YG+VP
Sbjct: 313 AKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPD 372
Query: 452 IEHYGCMIDLLSRGGHLEEAFELLRSMPV--EPNAIVVGTLLGACRMHNDVELARALSEH 509
HY C++D+L R G ++EA+EL +++ V E A++ G LL A R+H VE+ S+
Sbjct: 373 SRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKR 432
Query: 510 LFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTV 569
L + + LSN YA +G W + S+RL+MK +G K S I F
Sbjct: 433 LIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHA 492
Query: 570 FDHSHPKSDDIYQMIGRLVHDLRQVGY 596
D S +S +I + + L +++ G+
Sbjct: 493 GDLSCDESGEIERFLKDLEKRMKERGH 519
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 17/268 (6%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQ-VPY-PNVHLYNSLIRAHA 93
K IHA+L + L +++ V+ L+ + C + +A VF+ + Y NV + S+I A+A
Sbjct: 151 KNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYA 210
Query: 94 LNGS-HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYED 152
N H ++ F+ + F ++ AC+ L ++ H V + G+ +
Sbjct: 211 QNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESN 270
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
V SL+D Y++CG + A ++F + +++ SMI + G + A KLFDEM
Sbjct: 271 TVVATSLLDMYAKCGSLSC--AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM 328
Query: 213 P----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ-WNII----SWSTMVCGYSRAGD 263
+ V+ +L + +G +N+ E M + + ++ ++ +V R G
Sbjct: 329 VAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGR 388
Query: 264 MDMARML---FDKCPEKNLVLWTTIISG 288
+D A L + E+ +LW ++S
Sbjct: 389 VDEAYELAKTIEVGAEQGALLWGALLSA 416
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 170/565 (30%), Positives = 269/565 (47%), Gaps = 56/565 (9%)
Query: 26 LHRCSNLDLVKQ---IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L C+ L V Q +HAQ++K D++ A L++ + + ++ A+ V +++P +
Sbjct: 38 LKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGI 97
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
N+ + NG F F + G ++ T +L C + +H
Sbjct: 98 ASVNAAVSGLLENGFCRD-AFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHC 153
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
K GF +++V SL+ YSRCG + A R+F + + VT+N+ I GL+ G +
Sbjct: 154 LAMKSGFEMEVYVGTSLVSMYSRCGEWVL--AARMFEKVPHKSVVTYNAFISGLMENGVM 211
Query: 203 DGAFKLFDEM-----PERDMVSW-----------------------------------NT 222
+ +F+ M E + V++
Sbjct: 212 NLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTA 271
Query: 223 MLDGYAKAGEMNKAFELFDRMLQW-NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL-- 279
++D Y+K A+ +F + N+ISW++++ G G + A LF+K + L
Sbjct: 272 LIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKP 331
Query: 280 --VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIH 337
W ++ISG+++ G + EA +++M + P L S+L+AC++ L GK+IH
Sbjct: 332 DSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIH 391
Query: 338 ASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK-KDLVSWNSMIHGFGVHGQ 396
V + VL + IDMY KCG A IF + K KD V WN MI G+G HG+
Sbjct: 392 GHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGE 451
Query: 397 GEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYG 456
E A+E+F + E EP TF +L AC+H G V+KG F M++ YG P EH G
Sbjct: 452 CESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIG 511
Query: 457 CMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPS 516
CMIDLL R G L EA E++ M +++ +LLG+CR H D L + L +L P
Sbjct: 512 CMIDLLGRSGRLREAKEVIDQMSEPSSSVYS-SLLGSCRQHLDPVLGEEAAMKLAELEPE 570
Query: 517 DPGNFSLLSNIYAQAGDWMNVASVR 541
+P F +LS+IYA W +V S+R
Sbjct: 571 NPAPFVILSSIYAALERWEDVESIR 595
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 185/354 (52%), Gaps = 12/354 (3%)
Query: 116 PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM 175
P+ FT+P LLK+C + +++HA V K GF+ D+F +L+ Y + V A+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQV--TDAL 86
Query: 176 RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF-DEMPERDMVSWNTMLDGYAKAGEMN 234
++ M ER + N+ + GL+ G AF++F D ++ T+ G++
Sbjct: 87 KVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIE 146
Query: 235 KAFEL----FDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA 290
+L + + +++V YSR G+ +A +F+K P K++V + ISG
Sbjct: 147 GGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLM 206
Query: 291 EKGFMKEATVLYDKMEE-AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCST 349
E G M +++ M + + +P+D ++ +TACA L G+++H V + F+ T
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET 266
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
V A IDMY+KC C +A+ +F+++ ++L+SWNS+I G ++GQ E A+ELF +
Sbjct: 267 MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLS 463
EG +PD T+ L+ + G V + +F M V +VP ++ C+ LLS
Sbjct: 327 EGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSLK---CLTSLLS 376
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 215/373 (57%), Gaps = 3/373 (0%)
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDK 273
E D+ NT++ Y + A +LFD M N+++W++++ Y+++GD+ AR++FD+
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDE 199
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL-KPDDGVLISILTACAESGMLGL 332
E+++V W+++I GY ++G +A ++D+M G K ++ ++S++ ACA G L
Sbjct: 200 MSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNR 259
Query: 333 GKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK-DLVSWNSMIHGF 391
GK +H + + + + IDMYAKCG + A+ +F + + K+ D + WN++I G
Sbjct: 260 GKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGL 319
Query: 392 GVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQ 451
HG ++L+LF M +PD+ TF+ LL AC+H GLV + ++F S+ K G P+
Sbjct: 320 ASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPK 378
Query: 452 IEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLF 511
EHY CM+D+LSR G +++A + + MP++P ++G LL C H ++ELA + + L
Sbjct: 379 SEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLI 438
Query: 512 KLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFD 571
+L P + G + L+N+YA + S+R M+ G +K +G S + F D
Sbjct: 439 ELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHD 498
Query: 572 HSHPKSDDIYQMI 584
+H SD IY ++
Sbjct: 499 KTHFHSDKIYAVL 511
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 205/428 (47%), Gaps = 54/428 (12%)
Query: 27 HRCSNLDLVKQIHAQLLKAHL-HQDLYVAPKL-IAAFSLCRHISSAVNVFNQVPYPNVHL 84
H+C ++ + +IH L+ L ++ +V+ L +A S + A +++ P +
Sbjct: 16 HQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYG 75
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
+N +IR + N +P + S + M R G+ PD+ TYPFL+K+ + S+ L +H V
Sbjct: 76 WNFVIRGFS-NSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSV 134
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDG 204
K G D+F+ N+LI Y A +LF M ++ VTWNS++ + GD+
Sbjct: 135 VKSGLEWDLFICNTLIHMYGSFRDQA--SARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 205 AFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW-----NIISWSTMVCGYS 259
A +FDEM ERD+V+W++M+DGY K GE NKA E+FD+M++ N ++ +++C +
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA 252
Query: 260 RAGDMDMARM----------------------LFDKC---------------PEKNLVLW 282
G ++ + ++ KC E + ++W
Sbjct: 253 HLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 312
Query: 283 TTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR 342
II G A GF++E+ L+ KM E+ + PD+ + +L AC+ G++ S++
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKE 372
Query: 343 CRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQ------ 396
++ +D+ ++ G + A S+M K ++++G HG
Sbjct: 373 SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAET 432
Query: 397 -GEKALEL 403
G+K +EL
Sbjct: 433 VGKKLIEL 440
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 139/309 (44%), Gaps = 36/309 (11%)
Query: 249 ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEA 308
+S + S +GD+D A K + W +I G++ +++ +Y +M
Sbjct: 43 VSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRF 102
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRC-----RFRCSTKV------------ 351
GL PD ++ + + LG +H SV + F C+T +
Sbjct: 103 GLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASA 162
Query: 352 --------------LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQG 397
N+ +D YAK G + +A +F +M+ ++D+V+W+SMI G+ G+
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS-ERDVVTWSSMIDGYVKRGEY 221
Query: 398 EKALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYG 456
KALE+F M+ G + ++ T + ++CAC H G +++G+ + V+ + I
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 457 CMIDLLSRGGHLEEAFELL-RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVP 515
+ID+ ++ G + +A+ + R+ E +A++ ++G H + + L H +
Sbjct: 282 -LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLF-HKMRESK 339
Query: 516 SDPGNFSLL 524
DP + L
Sbjct: 340 IDPDEITFL 348
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 198/338 (58%), Gaps = 3/338 (0%)
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
S++V Y +G+++ A +F++ PE+N+V WT +ISG+A++ + LY KM ++
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD 218
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
P+D ++L+AC SG LG G+ +H + + N+ I MY KCG L AF I
Sbjct: 219 PNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMV-HEGFEPDKYTFIGLLCACTHAG 430
F + + KD+VSWNSMI G+ HG +A+ELF M+ G +PD T++G+L +C HAG
Sbjct: 279 FDQFS-NKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAG 337
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTL 490
LV +GR +FN M + +G+ P++ HY C++DLL R G L+EA EL+ +MP++PN+++ G+L
Sbjct: 338 LVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 491 LGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQ 550
L +CR+H DV +E L P L+N+YA G W A+VR MK+ G +
Sbjct: 397 LFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLK 456
Query: 551 KPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLV 588
G S I F D S+ + +I ++ L+
Sbjct: 457 TNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLI 494
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 145/396 (36%), Gaps = 105/396 (26%)
Query: 38 IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGS 97
H LK D+Y+ L+ + + +A VF ++P NV + ++I A
Sbjct: 142 FHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEW- 200
Query: 98 HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPN 157
+ + M++ P+++T+ LL ACTG +L + +H G + + N
Sbjct: 201 RVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISN 260
Query: 158 SLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDM 217
SLI Y +CG DL AF++FD+ +D+
Sbjct: 261 SLISMYCKCG---------------------------------DLKDAFRIFDQFSNKDV 287
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK 277
VSWN+M+ GYA+ G +A ELF+ M+ ++G +
Sbjct: 288 VSWNSMIAGYAQHGLAMQAIELFELMM--------------PKSG------------TKP 321
Query: 278 NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIH 337
+ + + ++S G +KE ++ M E GLKP+
Sbjct: 322 DAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELN---------------------- 359
Query: 338 ASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQG 397
+ C +D+ + G L A + M K + V W S++ VHG
Sbjct: 360 ------HYSC-------LVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDV 406
Query: 398 EKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVD 433
+ + EPD CA TH L +
Sbjct: 407 WTGIRAAEERLM--LEPD--------CAATHVQLAN 432
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/504 (29%), Positives = 263/504 (52%), Gaps = 21/504 (4%)
Query: 33 DLVK--QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
DLVK IH ++ L D+ VA L++ +S C + A +F + +V ++++I
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 91 AHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY 150
++ G H S F M R + P+ T +L+ C G ++ L + IH + K
Sbjct: 375 SYEQAGQHDE-AISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIE 433
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
++ ++I Y++CG A++ F + +DAV +N++ G + GD + AF ++
Sbjct: 434 SELETATAVISMYAKCGR--FSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 211 EMP-------ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWS----TMVCGYS 259
M R MV ML A + + ++ ++++ S ++ ++
Sbjct: 492 NMKLHGVCPDSRTMVG---MLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFT 548
Query: 260 RAGDMDMARMLFDKCP-EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLI 318
+ + A +LFDKC EK+ V W +++GY G +EA + +M+ +P+ +
Sbjct: 549 KCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFV 608
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
+I+ A AE L +G +H+S+ +C F T V N+ +DMYAKCG ++++ F +++ K
Sbjct: 609 NIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNK 668
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY 438
+VSWN+M+ + HG A+ LF SM +PD +F+ +L AC HAGLV++G+
Sbjct: 669 Y-IVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHN 498
F M + + I ++EHY CM+DLL + G EA E++R M V+ + V G LL + RMH
Sbjct: 728 FEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHC 787
Query: 499 DVELARALSEHLFKLVPSDPGNFS 522
++ L+ A L KL P +P ++S
Sbjct: 788 NLWLSNAALCQLVKLEPLNPSHYS 811
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 215/467 (46%), Gaps = 18/467 (3%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L L C N + Q+H L+ + L +LI A+SL + + +F+ V P V
Sbjct: 9 LLMLRECKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGV 64
Query: 83 HLYNSLIRAHALNGSH-PSLTFSTFFHMQRE-GVYPDNFTYPFLLKACTGPSSLPLVQMI 140
L+NS+IR + G H +L F F +M E G+ PD +++ F LKAC G I
Sbjct: 65 VLWNSMIRGYTRAGLHREALGF--FGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRI 122
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
H + + G D+++ +L++ Y C + A ++F M +D VTWN+M+ GL + G
Sbjct: 123 HDLIAEMGLESDVYIGTALVEMY--CKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNG 180
Query: 201 DLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISW--STM 254
A LF +M + D VS ++ +K + + L +++ I S +
Sbjct: 181 CSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGL 240
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
+ Y D+ A +F++ K+ W T+++ YA GF +E L+D M ++ +
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK 300
Query: 315 GVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSK 374
S L A A G L G IH + V + + MY+KCG L+ A +F
Sbjct: 301 VAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFIN 360
Query: 375 MTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDK 434
+ +D+VSW++MI + GQ ++A+ LF M+ +P+ T +L C
Sbjct: 361 IE-DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRL 419
Query: 435 GRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE 481
G++ K I ++E +I + ++ G A + +P++
Sbjct: 420 GKSIHCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 266/537 (49%), Gaps = 27/537 (5%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAA-FSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
Q HA ++K+ L D V L++ F L + VF+ + + S++ +
Sbjct: 82 QFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG 141
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
H F M G+ + FT +KAC+ + L + H V GF + F+
Sbjct: 142 KEHVK-ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFI 200
Query: 156 PNSLIDSYSRCGGVGID--GAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
++L Y GV + A R+F M E D + W +++ + + A LF M
Sbjct: 201 SSTLAYLY----GVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMH 256
Query: 214 ER-----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQ----WNIISWSTMVCGYSRAGDM 264
D ++ T+L + + E+ +++ N++ S+++ Y + G +
Sbjct: 257 RGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
AR +F+ +KN V W+ ++ GY + G ++A ++ +MEE L ++L AC
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLY----CFGTVLKAC 372
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVL--NAFIDMYAKCGCLDAAFGIFSKMTGKKDLV 382
A + LGK+IH Q R C V+ +A ID+Y K GC+D+A ++SKM+ ++++
Sbjct: 373 AGLAAVRLGKEIHG--QYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMS-IRNMI 429
Query: 383 SWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSM 442
+WN+M+ +G+GE+A+ F+ MV +G +PD +FI +L AC H G+VD+GRNYF M
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLM 489
Query: 443 EKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDV-E 501
K YGI P EHY CMIDLL R G EEA LL +A + G LLG C + D
Sbjct: 490 AKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASR 549
Query: 502 LARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
+A +++ + +L P ++ LLSN+Y G + ++R M G K G S I
Sbjct: 550 VAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 178/382 (46%), Gaps = 17/382 (4%)
Query: 121 YPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSA 180
Y LL+ C S HAHV K G D V NSL+ Y + G G+ R+F
Sbjct: 64 YASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKL-GPGMRETRRVFDG 122
Query: 181 MEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKA----GE--MN 234
+DA++W SM+ G V G + A ++F EM + + L KA GE +
Sbjct: 123 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182
Query: 235 KAFE--LFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEK 292
+ F + +WN ST+ Y + AR +FD+ PE +++ WT ++S +++
Sbjct: 183 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 242
Query: 293 GFMKEATVLYDKMEEA-GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
+EA L+ M GL PD ++LTAC L GK+IH + + V
Sbjct: 243 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 302
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
++ +DMY KCG + A +F+ M+ KK+ VSW++++ G+ +G+ EKA+E+F M
Sbjct: 303 ESSLLDMYGKCGSVREARQVFNGMS-KKNSVSWSALLGGYCQNGEHEKAIEIFREME--- 358
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
E D Y F +L AC V G+ + G + +IDL + G ++ A
Sbjct: 359 -EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVR-RGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 472 FELLRSMPVEPNAIVVGTLLGA 493
+ M + N I +L A
Sbjct: 417 SRVYSKMSIR-NMITWNAMLSA 437
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 20/275 (7%)
Query: 25 TLHRCSNLDLVKQ---IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPN 81
L C NL +KQ IH +L+ + ++ V L+ + C + A VFN + N
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIH 141
+++L+ + NG H F M+ + +Y + +LKAC G +++ L + IH
Sbjct: 331 SVSWSALLGGYCQNGEHEK-AIEIFREMEEKDLY----CFGTVLKACAGLAAVRLGKEIH 385
Query: 142 AHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD 201
+ G + ++ V ++LID Y + G ID A R++S M R+ +TWN+M+ L + G
Sbjct: 386 GQYVRRGCFGNVIVESALIDLYGKSG--CIDSASRVYSKMSIRNMITWNAMLSALAQNGR 443
Query: 202 LDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-----WS 252
+ A F++M ++ D +S+ +L G +++ F M + I +S
Sbjct: 444 GEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYS 503
Query: 253 TMVCGYSRAGDMDMARMLFDKCPEKN-LVLWTTII 286
M+ RAG + A L ++ +N LW ++
Sbjct: 504 CMIDLLGRAGLFEEAENLLERAECRNDASLWGVLL 538
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 178/630 (28%), Positives = 283/630 (44%), Gaps = 88/630 (13%)
Query: 47 LHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYP-NVHLYNSLIRAHALNGSHPSLTFST 105
L +++Y +IAA+ ++ A +F ++ YN+L+ A S
Sbjct: 50 LERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEM 109
Query: 106 FFHMQR---EGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDS 162
F M R + ++ D+FT ++K +++ + +H + K G F +SLI
Sbjct: 110 FGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHM 169
Query: 163 YSRCGGV-------------------------------GIDGAMRLFSAMEE-RDAVTWN 190
YS+CG ID A+ +F E D ++WN
Sbjct: 170 YSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWN 229
Query: 191 SMIGGLVRGGDLDGAFKLFDEMPERDMVSWNT---------------------------- 222
++I G + G + A K+ M E + W+
Sbjct: 230 TLIAGYAQNGYEEEALKMAVSMEENGL-KWDEHSFGAVLNVLSSLKSLKIGKEVHARVLK 288
Query: 223 ------------MLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARML 270
++D Y K G M A N+ S S+M+ GYS G M A+ L
Sbjct: 289 NGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRL 348
Query: 271 FDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL-----KPDDGVLISILTACA 325
FD EKNLV+WT + GY + +VL ++ A + PD V++S+L AC+
Sbjct: 349 FDSLSEKNLVVWTAMFLGYL--NLRQPDSVL--ELARAFIANETNTPDSLVMVSVLGACS 404
Query: 326 ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
+ GK+IH R K++ AF+DMY+KCG ++ A IF + ++D V +N
Sbjct: 405 LQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYN 463
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
+MI G HG K+ + F M GF+PD+ TF+ LL AC H GLV +G YF SM +
Sbjct: 464 AMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEA 523
Query: 446 YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM-PVEPNAIVVGTLLGACRMHNDVELAR 504
Y I P+ HY CMIDL + L++A EL+ + VE +A+++G L AC + + EL +
Sbjct: 524 YNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVK 583
Query: 505 ALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXX 564
+ E L + S+ + ++N YA +G W + +R QM+ + SG S
Sbjct: 584 EVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQF 643
Query: 565 XXFTVFDHSHPKSDDIYQMIGRLVHDLRQV 594
FT D SH +++ IY M+ + DL ++
Sbjct: 644 HMFTSSDISHYETEAIYAMLHFVTKDLSEI 673
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 124/245 (50%), Gaps = 40/245 (16%)
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLF--DKCP 275
VS N +++ Y+K+G + +A +FD ML+ N+ SW+ ++ Y + ++ AR LF D C
Sbjct: 24 VSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNC- 82
Query: 276 EKNLVLWTTIISGYAEK-GFMKEATVLYDKM---EEAGLKPDDGVLISILTACAESGMLG 331
E++L+ + T++SG+A+ G EA ++ +M E+ + DD + +++ A+ +
Sbjct: 83 ERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF 142
Query: 332 LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG-----C---------------------- 364
G+++H + + + +++ I MY+KCG C
Sbjct: 143 YGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAA 202
Query: 365 ------LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
+D A +F + D +SWN++I G+ +G E+AL++ SM G + D+++
Sbjct: 203 YCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHS 262
Query: 419 FIGLL 423
F +L
Sbjct: 263 FGAVL 267
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 156/366 (42%), Gaps = 45/366 (12%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNS 87
+C N+ + H LL + +LY A +I +S + A +F+ + N+ ++ +
Sbjct: 307 KCGNMKYAESAH--LL--YGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTA 362
Query: 88 LIRAHALNGSHPS--LTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
+ + LN P L + F + E PD+ +L AC+ + + + IH H
Sbjct: 363 MFLGY-LNLRQPDSVLELARAF-IANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
+ G D + + +D YS+CG V + A R+F + ERD V +N+MI G G +
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNV--EYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKS 478
Query: 206 FKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-----WSTMVC 256
F+ F++M E D +++ +L G + + + F M++ IS ++ M+
Sbjct: 479 FQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMID 538
Query: 257 GYSRAGDMDMARMLFDKCP--EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL---K 311
Y +A +D A L + EK+ V I+ + + T L ++EE L
Sbjct: 539 LYGKAYRLDKAIELMEGIDQVEKDAV----ILGAFLNACSWNKNTELVKEVEEKLLVIEG 594
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC----LDA 367
+ I I A A SG +QR R + K L F GC +D
Sbjct: 595 SNGSRYIQIANAYASSGRWD-------EMQRIRHQMRGKELEIF------SGCSWANIDK 641
Query: 368 AFGIFS 373
F +F+
Sbjct: 642 QFHMFT 647
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 166/575 (28%), Positives = 283/575 (49%), Gaps = 19/575 (3%)
Query: 35 VKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHAL 94
+K I A +LK+ ++ KL+ A C I A VF+ + ++ +NSLI A+ +
Sbjct: 84 IKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLI-AYLI 141
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF-YEDI 153
+ M V PD +T + KA + S Q H G ++
Sbjct: 142 KHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNV 201
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM- 212
FV ++L+D Y + G A + +EE+D V ++I G + G+ A K F M
Sbjct: 202 FVGSALVDMYVKFGKT--REAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSML 259
Query: 213 ---PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWN----IISWSTMVCGYSRAGDMD 265
+ + ++ ++L ++ + M++ + S ++++ Y R +D
Sbjct: 260 VEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVD 319
Query: 266 MARMLFDKCPE-KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
+ +F KC E N V WT++ISG + G + A + + KM +KP+ L S L C
Sbjct: 320 DSLRVF-KCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
+ M G++IH V + F + ID+Y KCGC D A +F ++ + D++S
Sbjct: 379 SNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS-EVDVISL 437
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
N+MI+ + +G G +AL+LF M++ G +P+ T + +L AC ++ LV++G F+S K
Sbjct: 438 NTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK 497
Query: 445 VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELAR 504
I+ +HY CM+DLL R G LEEA E+L + + P+ ++ TLL AC++H VE+A
Sbjct: 498 -DKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAE 555
Query: 505 ALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXX 564
++ + ++ P D G L+SN+YA G W V ++ +MK+ +K S +
Sbjct: 556 RITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKET 615
Query: 565 XXFTVFD-HSHPKSDDIYQMIGRLVHDLRQVGYVP 598
F D SHP S+ I + + L+ + +GYV
Sbjct: 616 HTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVE 650
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 161/551 (29%), Positives = 268/551 (48%), Gaps = 18/551 (3%)
Query: 38 IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGS 97
+++Q++K ++ V ++ +S C + SA +F+ V + +N++I N
Sbjct: 221 LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDK 280
Query: 98 -HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
L F F +M GV P FTY +L C+ S L ++IHA + D+ +
Sbjct: 281 IEDGLMF--FRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLD 338
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM---- 212
N+L+D Y CG + A +F + + V+WNS+I G G + A ++ +
Sbjct: 339 NALLDMYCSCGD--MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 213 -PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMA 267
P D +++ + A+ L ++ + ++ +T++ Y + + + A
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 268 RMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAES 327
+ +FD E+++VLWT +I G++ G + A + +M + D L S++ AC++
Sbjct: 457 QKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDM 516
Query: 328 GMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSM 387
ML G+ H R F C V A +DMY K G + A IFS + DL WNSM
Sbjct: 517 AMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFS-LASNPDLKCWNSM 575
Query: 388 IHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYG 447
+ + HG EKAL F ++ GF PD T++ LL AC+H G +G+ +N M K G
Sbjct: 576 LGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQG 634
Query: 448 IVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPN-AIVVGTLLGACRMHNDVELARAL 506
I +HY CM++L+S+ G ++EA EL+ P N A + TLL AC ++++
Sbjct: 635 IKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYA 694
Query: 507 SEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI-XXXXXXX 565
+E + KL P D LLSN+YA G W +VA +R +++ K G S I
Sbjct: 695 AEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQ 754
Query: 566 XFTVFDHSHPK 576
F+ D S+P+
Sbjct: 755 VFSSGDQSNPE 765
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 252/532 (47%), Gaps = 23/532 (4%)
Query: 12 WFSPRRLLEEKLCTLHR-CSNLDLVK---QIHAQLLKA---HLHQDLYVAPKLIAAFSLC 64
+F P + + L R C ++ ++K QIHA +L A + Y LI+ + C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 65 RHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFL 124
+ A VF+++P+ NV YN+L A++ N S F HM E V P++ T+ L
Sbjct: 146 GSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSL 205
Query: 125 LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER 184
++ C + + +++ + K G+ +++ V S++ YS CG ++ A R+F + R
Sbjct: 206 VQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCG--DLESARRIFDCVNNR 263
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELF 240
DAV WN+MI G ++ ++ F M + +++ +L+G +K G + +
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 241 DRMLQWNIIS----WSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
R++ + ++ + ++ Y GDM A +F + NLV W +IISG +E GF +
Sbjct: 324 ARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGE 383
Query: 297 EATVLYDKMEEAGL-KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
+A ++Y ++ +PD+ + ++A AE GK +H V + + S V
Sbjct: 384 QAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTL 443
Query: 356 IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
+ MY K ++A +F M ++D+V W MI G G E A++ F M E D
Sbjct: 444 LSMYFKNREAESAQKVFDVMK-ERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSD 502
Query: 416 KYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
++ ++ AC+ ++ +G F+ + G + G ++D+ + G E A E +
Sbjct: 503 GFSLSSVIGACSDMAMLRQGE-VFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETA-ETI 560
Query: 476 RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFK--LVPSDPGNFSLLS 525
S+ P+ ++LGA H VE A + E + + +P SLL+
Sbjct: 561 FSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 110/256 (42%), Gaps = 22/256 (8%)
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG-- 309
+ ++ Y R ++ AR +FDK P++N+V T+ A ++ + L+ ++ + G
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIV---TLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 310 -------LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK---VLNAFIDMY 359
L ++ + C +L ++IHA V +T+ N I MY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 360 AKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQ-GEKALELFSSMVHEGFEPDKYT 418
+CG L+ A +F KM +++VS+N++ + + A L + M E +P+ T
Sbjct: 143 VRCGSLEQARKVFDKMP-HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
F L+ C V G + NS G + ++ + S G LE A + +
Sbjct: 202 FTSLVQVCAVLEDVLMGSS-LNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 479 ----PVEPNAIVVGTL 490
V N ++VG+L
Sbjct: 261 NNRDAVAWNTMIVGSL 276
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/572 (29%), Positives = 268/572 (46%), Gaps = 81/572 (14%)
Query: 23 LCTLHRCSNLDLVKQ---IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY 79
L L CS ++ KQ IH + +L + LI + + A +F+++
Sbjct: 16 LKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISK 75
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
+V + ++I + G HP F M RE V + FTY +LK+C L
Sbjct: 76 RDVVSWTAMISRFSRCGYHPDALL-LFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
IH VEK ++ V ++L+ Y+RCG MEE
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCG------------KMEE---------------- 166
Query: 200 GDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ-------------- 245
A FD M ERD+VSWN M+DGY + +F LF ML
Sbjct: 167 -----ARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLL 221
Query: 246 --------WNIIS-----------------WSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
I+S ++V Y + G + A L + +++L+
Sbjct: 222 RASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLL 281
Query: 281 LWTTIISGYAEKG-FMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA- 338
T +I+G++++ +A ++ M K D+ V+ S+L C + +G++IH
Sbjct: 282 SCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGF 341
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+++ + R + N+ IDMYAK G ++ A F +M +KD+ SW S+I G+G HG E
Sbjct: 342 ALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSLIAGYGRHGNFE 400
Query: 399 KALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCM 458
KA++L++ M HE +P+ TF+ LL AC+H G + G +++M +GI + EH C+
Sbjct: 401 KAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCI 460
Query: 459 IDLLSRGGHLEEAFELLRSMP--VEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPS 516
ID+L+R G+LEEA+ L+RS V ++ G L ACR H +V+L++ + L + P
Sbjct: 461 IDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPR 520
Query: 517 DPGNFSLLSNIYAQAGDWMNVASVRLQMKNAG 548
P N+ L+++YA G W N + R MK +G
Sbjct: 521 KPVNYINLASVYAANGAWDNALNTRKLMKESG 552
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/574 (27%), Positives = 280/574 (48%), Gaps = 21/574 (3%)
Query: 27 HRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYN 86
RC +LDL + +H ++ L Q +++ LI +S C + A+++F++ + +N
Sbjct: 160 ERC-DLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWN 218
Query: 87 SLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQ---MIHAH 143
SLI + G+ + M R+G+ + +LKAC + ++ IH +
Sbjct: 219 SLISGYVRVGAAEE-PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
K G DI V +L+D Y++ G + A++LFS M ++ VT+N+MI G ++ ++
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGS--LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEIT 335
Query: 204 G-----AFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFE--------LFDRMLQWNIIS 250
AFKLF +M R + + KA K E + Q +
Sbjct: 336 DEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFI 395
Query: 251 WSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
S ++ Y+ G + F ++++ WT++I + + ++ A L+ ++ + +
Sbjct: 396 GSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHI 455
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
+P++ + +++ACA+ L G++I + T V + I MYAK G + A
Sbjct: 456 RPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQ 515
Query: 371 IFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG 430
+F ++ D+ ++++MI HG +AL +F SM G +P++ F+G+L AC H G
Sbjct: 516 VFIEVQ-NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGG 574
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTL 490
LV +G YF M+ Y I P +H+ C++DLL R G L +A L+ S + + + L
Sbjct: 575 LVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRAL 634
Query: 491 LGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQ 550
L +CR++ D + + ++E L +L P G++ LL NIY +G + VR M++ G +
Sbjct: 635 LSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVK 694
Query: 551 KPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMI 584
K S I F V D SHP S IY M+
Sbjct: 695 KEPALSWIVIGNQTHSFAVADLSHPSSQMIYTML 728
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 142/521 (27%), Positives = 238/521 (45%), Gaps = 56/521 (10%)
Query: 25 TLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHL 84
T + ++ L K H ++K+ L+ LY+ L+ + CR + A +F+++P N+
Sbjct: 56 TAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIIS 115
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
+NSLI + G + F + + D FTY L C L L +++H V
Sbjct: 116 FNSLISGYTQMGFYEQ-AMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLV 174
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDG 204
G + +F+ N LID YS+CG +D AM LF +ERD V+WNS+I G VR G +
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCG--KLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEE 232
Query: 205 AFKLFDEMPERDMVSWNT-MLDGYAKAGEMNKAFELFDR-----------MLQWNIISWS 252
L +M RD ++ T L KA +N ++ ++++I+ +
Sbjct: 233 PLNLLAKM-HRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRT 291
Query: 253 TMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFM-----KEATVLYDKMEE 307
++ Y++ G + A LF P KN+V + +ISG+ + + EA L+ M+
Sbjct: 292 ALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQR 351
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDA 367
GL+P +L AC+ + L G++IHA + + F+ + +A I++YA G +
Sbjct: 352 RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTED 411
Query: 368 AFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
F+ T K+D+ SW SMI + Q E A +LF + P++YT ++ AC
Sbjct: 412 GMQCFAS-TSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Query: 428 H-AGL----------VDKGRNYFNSME-----------------KVYGIV--PQIEHYGC 457
A L + G + F S++ +V+ V P + Y
Sbjct: 471 DFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSA 530
Query: 458 MIDLLSRGGHLEEAFELLRSMP---VEPN-AIVVGTLLGAC 494
MI L++ G EA + SM ++PN +G L+ C
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACC 571
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/439 (28%), Positives = 190/439 (43%), Gaps = 62/439 (14%)
Query: 110 QREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV 169
Q + D+ Y L + S+ L ++ H H+ K +++ N+L++ Y +C +
Sbjct: 39 QPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCREL 98
Query: 170 GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAK 229
G A +LF M ER+ +++NS+I G + G + A +LF E E N LD +
Sbjct: 99 GF--ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREA-----NLKLDKFTY 151
Query: 230 AGEMNKAFELFD-------------RMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPE 276
AG + E D L + + ++ YS+ G +D A LFD+C E
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 277 KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA---ESGMLGLG 333
++ V W ++ISGY G +E L KM GL L S+L AC G + G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGV 393
IH + V A +DMYAK G L A +FS M K++V++N+MI GF
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPS-KNVVTYNAMISGFLQ 330
Query: 394 HGQ-----GEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR--------NYFN 440
+ +A +LF M G EP TF +L AC+ A ++ GR N F
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQ 390
Query: 441 SME-------KVYGIVPQIE---------------HYGCMIDLLSRGGHLEEAFELLR-- 476
S E ++Y ++ E + MID + LE AF+L R
Sbjct: 391 SDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Query: 477 -SMPVEPNAIVVGTLLGAC 494
S + P V ++ AC
Sbjct: 451 FSSHIRPEEYTVSLMMSAC 469
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/607 (25%), Positives = 269/607 (44%), Gaps = 75/607 (12%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+ IH ++K + V L+ ++ A VF Q+P ++ +NSL+ A +N
Sbjct: 264 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM-ASFVN 322
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
M G + T+ L AC P +++H V G + + +
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 382
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
N+L+ Y + G ++ + ++ +MP R
Sbjct: 383 GNALVSMYGKIG---------------------------------EMSESRRVLLQMPRR 409
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRM-------------------------------L 244
D+V+WN ++ GYA+ + +KA F M L
Sbjct: 410 DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 469
Query: 245 QWNIISW---------STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFM 295
I+S ++++ Y++ GD+ ++ LF+ +N++ W +++ A G
Sbjct: 470 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHG 529
Query: 296 KEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
+E L KM G+ D L+A A+ +L G+++H + F + + NA
Sbjct: 530 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 589
Query: 356 IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
DMY+KCG + + + L SWN +I G HG E+ F M+ G +P
Sbjct: 590 ADMYSKCGEIGEVVKMLPPSV-NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 648
Query: 416 KYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
TF+ LL AC+H GLVDKG Y++ + + +G+ P IEH C+IDLL R G L EA +
Sbjct: 649 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFI 708
Query: 476 RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWM 535
MP++PN +V +LL +C++H +++ R +E+L KL P D + L SN++A G W
Sbjct: 709 SKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWE 768
Query: 536 NVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVG 595
+V +VR QM +K S + F + D +HP++ +IY + + +++ G
Sbjct: 769 DVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 828
Query: 596 YVPGIYQ 602
YV Q
Sbjct: 829 YVADTSQ 835
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 223/504 (44%), Gaps = 48/504 (9%)
Query: 34 LVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHA 93
L +QI Q++K+ L L V LI+ ++ A +F+Q+ + +NS+ A+A
Sbjct: 161 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 94 LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
NG H +F F M+R ++ T LL + IH V K GF +
Sbjct: 221 QNG-HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 279
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG-DLDGAFKLFDEM 212
V N+L+ Y+ G ++ + +F M +D ++WNS++ V G LD L +
Sbjct: 280 CVCNTLLRMYA-GAGRSVEANL-VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 337
Query: 213 PERDMVSWNTMLDGYA--------KAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDM 264
V++ T A + G + + + +N I + +V Y + G+M
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF-YNQIIGNALVSMYGKIGEM 396
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
+R + + P +++V W +I GYAE +A + M G+ + ++S+L+AC
Sbjct: 397 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 456
Query: 325 AESG-MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
G +L GK +HA + F V N+ I MYAKCG L ++ +F+ + +++++
Sbjct: 457 LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIIT 515
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY----- 438
WN+M+ HG GE+ L+L S M G D+++F L A ++++G+
Sbjct: 516 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 575
Query: 439 ----------FNSMEKVYGIVPQIEH---------------YGCMIDLLSRGGHLEE--- 470
FN+ +Y +I + +I L R G+ EE
Sbjct: 576 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 635
Query: 471 AFELLRSMPVEPNAIVVGTLLGAC 494
F + M ++P + +LL AC
Sbjct: 636 TFHEMLEMGIKPGHVTFVSLLTAC 659
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 190/409 (46%), Gaps = 13/409 (3%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q+H + K+ L D+YV+ ++ + + +S + VF ++P NV + SL+ ++ G
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
P + M+ EGV + + ++ +C L + I V K G + V
Sbjct: 123 -EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM---- 212
NSLI G V D A +F M ERD ++WNS+ + G ++ +F++F M
Sbjct: 182 NSLISMLGSMGNV--DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 213 PERDMVSWNTMLD--GYAKAGEMNKAFELFDRMLQWN--IISWSTMVCGYSRAGDMDMAR 268
E + + +T+L G+ + + + ++ + +T++ Y+ AG A
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG 328
++F + P K+L+ W ++++ + G +A L M +G + S L AC
Sbjct: 300 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 359
Query: 329 MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
G+ +H V + + NA + MY K G + + + +M ++D+V+WN++I
Sbjct: 360 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 418
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG-LVDKGR 436
G+ +KAL F +M EG + T + +L AC G L+++G+
Sbjct: 419 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 467
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 201/505 (39%), Gaps = 113/505 (22%)
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSL--PLVQMIHAHVEKFGFYEDIFVPNSLIDSY 163
F M G+ P +F L+ AC S+ VQ +H V K G D++V +++ Y
Sbjct: 29 FRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSDVYVSTAILHLY 87
Query: 164 SRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTM 223
G G+ R K+F+EMP+R++VSW ++
Sbjct: 88 ---GVYGLVSCSR------------------------------KVFEEMPDRNVVSWTSL 114
Query: 224 LDGYAKAGEMNKAFELFDRM---------------------------------------L 244
+ GY+ GE + +++ M L
Sbjct: 115 MVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL 174
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK 304
+ + ++++ G++D A +FD+ E++ + W +I + YA+ G ++E+ ++
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSL 234
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
M + + + ++L+ G+ IH V + F V N + MYA G
Sbjct: 235 MRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGR 294
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
A +F +M KDL+SWNS++ F G+ AL L SM+ G + TF L
Sbjct: 295 SVEANLVFKQMP-TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 425 ACTHAGLVDKGRNYF---------------NSMEKVYGIVPQI-EHYGCMIDLLSR---- 464
AC +KGR N++ +YG + ++ E ++ + R
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVA 413
Query: 465 -----GGHLEE--------AFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLF 511
GG+ E+ AF+ +R V N I V ++L AC + D+ L R H +
Sbjct: 414 WNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL-LERGKPLHAY 472
Query: 512 KL---VPSDPGNFSLLSNIYAQAGD 533
+ SD + L +YA+ GD
Sbjct: 473 IVSAGFESDEHVKNSLITMYAKCGD 497
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 135/316 (42%), Gaps = 54/316 (17%)
Query: 212 MPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWS----TMVCGYSRAGDM--- 264
MP R+ VSWNTM+ G + G + E F +M I S ++V R+G M
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 265 ---------------------------------DMARMLFDKCPEKNLVLWTTIISGYAE 291
+R +F++ P++N+V WT+++ GY++
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
KG +E +Y M G+ ++ + ++++C LG++I V + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
N+ I M G +D A IF +M+ ++D +SWNS+ + +G E++ +FS M
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 239
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQI--EHYGCMIDLLSR----G 465
E + T LL H GR ++G+V ++ + C+ + L R
Sbjct: 240 DEVNSTTVSTLLSVLGHVDHQKWGRG-------IHGLVVKMGFDSVVCVCNTLLRMYAGA 292
Query: 466 GHLEEAFELLRSMPVE 481
G EA + + MP +
Sbjct: 293 GRSVEANLVFKQMPTK 308
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 156/378 (41%), Gaps = 43/378 (11%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
L+ K +HA ++ A D +V LI ++ C +SS+ ++FN + N+ +N+++ A
Sbjct: 463 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 522
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
+A +G H M+ GV D F++ L A + L Q +H K GF
Sbjct: 523 NAHHG-HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 581
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
D F+ N+ D YS+CG +G +++ R +WN +I L R G + F E
Sbjct: 582 DSFIFNAAADMYSKCGEIG--EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHE 639
Query: 212 MPERDM----VSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMA 267
M E + V++ ++L + G ++K +D + +
Sbjct: 640 MLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR---------------------- 677
Query: 268 RMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAES 327
D E + +I G + EA KM +KP+D V S+L +C
Sbjct: 678 ----DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMP---MKPNDLVWRSLLASCKIH 730
Query: 328 GMLGLGKKIHASVQRCRFR-CSTKVLNAFIDMYAKCGCLDAAFGIFSKM----TGKKDLV 382
G L G+K ++ + S VL++ +M+A G + + +M KK
Sbjct: 731 GNLDRGRKAAENLSKLEPEDDSVYVLSS--NMFATTGRWEDVENVRKQMGFKNIKKKQAC 788
Query: 383 SWNSMIHGFGVHGQGEKA 400
SW + G G++
Sbjct: 789 SWVKLKDKVSSFGIGDRT 806
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/607 (25%), Positives = 269/607 (44%), Gaps = 75/607 (12%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+ IH ++K + V L+ ++ A VF Q+P ++ +NSL+ A +N
Sbjct: 281 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM-ASFVN 339
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
M G + T+ L AC P +++H V G + + +
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQII 399
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
N+L+ Y + G ++ + ++ +MP R
Sbjct: 400 GNALVSMYGKIG---------------------------------EMSESRRVLLQMPRR 426
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRM-------------------------------L 244
D+V+WN ++ GYA+ + +KA F M L
Sbjct: 427 DVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPL 486
Query: 245 QWNIISW---------STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFM 295
I+S ++++ Y++ GD+ ++ LF+ +N++ W +++ A G
Sbjct: 487 HAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHG 546
Query: 296 KEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
+E L KM G+ D L+A A+ +L G+++H + F + + NA
Sbjct: 547 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 606
Query: 356 IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
DMY+KCG + + + L SWN +I G HG E+ F M+ G +P
Sbjct: 607 ADMYSKCGEIGEVVKMLPPSV-NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 665
Query: 416 KYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
TF+ LL AC+H GLVDKG Y++ + + +G+ P IEH C+IDLL R G L EA +
Sbjct: 666 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFI 725
Query: 476 RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWM 535
MP++PN +V +LL +C++H +++ R +E+L KL P D + L SN++A G W
Sbjct: 726 SKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWE 785
Query: 536 NVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVG 595
+V +VR QM +K S + F + D +HP++ +IY + + +++ G
Sbjct: 786 DVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESG 845
Query: 596 YVPGIYQ 602
YV Q
Sbjct: 846 YVADTSQ 852
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 127/504 (25%), Positives = 223/504 (44%), Gaps = 48/504 (9%)
Query: 34 LVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHA 93
L +QI Q++K+ L L V LI+ ++ A +F+Q+ + +NS+ A+A
Sbjct: 178 LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 94 LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
NG H +F F M+R ++ T LL + IH V K GF +
Sbjct: 238 QNG-HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV 296
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG-DLDGAFKLFDEM 212
V N+L+ Y+ G ++ + +F M +D ++WNS++ V G LD L +
Sbjct: 297 CVCNTLLRMYA-GAGRSVEANL-VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 354
Query: 213 PERDMVSWNTMLDGYA--------KAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDM 264
V++ T A + G + + + +N I + +V Y + G+M
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLF-YNQIIGNALVSMYGKIGEM 413
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
+R + + P +++V W +I GYAE +A + M G+ + ++S+L+AC
Sbjct: 414 SESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSAC 473
Query: 325 AESG-MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
G +L GK +HA + F V N+ I MYAKCG L ++ +F+ + +++++
Sbjct: 474 LLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIIT 532
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY----- 438
WN+M+ HG GE+ L+L S M G D+++F L A ++++G+
Sbjct: 533 WNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAV 592
Query: 439 ----------FNSMEKVYGIVPQIEH---------------YGCMIDLLSRGGHLEE--- 470
FN+ +Y +I + +I L R G+ EE
Sbjct: 593 KLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCA 652
Query: 471 AFELLRSMPVEPNAIVVGTLLGAC 494
F + M ++P + +LL AC
Sbjct: 653 TFHEMLEMGIKPGHVTFVSLLTAC 676
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 190/409 (46%), Gaps = 13/409 (3%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q+H + K+ L D+YV+ ++ + + +S + VF ++P NV + SL+ ++ G
Sbjct: 80 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 139
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
P + M+ EGV + + ++ +C L + I V K G + V
Sbjct: 140 -EPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM---- 212
NSLI G V D A +F M ERD ++WNS+ + G ++ +F++F M
Sbjct: 199 NSLISMLGSMGNV--DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFH 256
Query: 213 PERDMVSWNTMLD--GYAKAGEMNKAFELFDRMLQWN--IISWSTMVCGYSRAGDMDMAR 268
E + + +T+L G+ + + + ++ + +T++ Y+ AG A
Sbjct: 257 DEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 316
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG 328
++F + P K+L+ W ++++ + G +A L M +G + S L AC
Sbjct: 317 LVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPD 376
Query: 329 MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
G+ +H V + + NA + MY K G + + + +M ++D+V+WN++I
Sbjct: 377 FFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALI 435
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG-LVDKGR 436
G+ +KAL F +M EG + T + +L AC G L+++G+
Sbjct: 436 GGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 124/546 (22%), Positives = 219/546 (40%), Gaps = 116/546 (21%)
Query: 66 HISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFH-MQREGVYPDNFTYPFL 124
+ A ++F+ +P N +N+++ G + L FF M G+ P +F L
Sbjct: 7 RVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLY--LEGMEFFRKMCDLGIKPSSFVIASL 64
Query: 125 LKACTGPSSL--PLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
+ AC S+ VQ +H V K G D++V +++ Y G G+ R
Sbjct: 65 VTACGRSGSMFREGVQ-VHGFVAKSGLLSDVYVSTAILHLY---GVYGLVSCSR------ 114
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDR 242
K+F+EMP+R++VSW +++ GY+ GE + +++
Sbjct: 115 ------------------------KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKG 150
Query: 243 M---------------------------------------LQWNIISWSTMVCGYSRAGD 263
M L+ + ++++ G+
Sbjct: 151 MRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGN 210
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+D A +FD+ E++ + W +I + YA+ G ++E+ ++ M + + + ++L+
Sbjct: 211 VDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSV 270
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
G+ IH V + F V N + MYA G A +F +M KDL+S
Sbjct: 271 LGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP-TKDLIS 329
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYF---- 439
WNS++ F G+ AL L SM+ G + TF L AC +KGR
Sbjct: 330 WNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV 389
Query: 440 -----------NSMEKVYGIVPQI-EHYGCMIDLLSR---------GGHLEE-------- 470
N++ +YG + ++ E ++ + R GG+ E+
Sbjct: 390 VSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALA 449
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKL---VPSDPGNFSLLSNI 527
AF+ +R V N I V ++L AC + D+ L R H + + SD + L +
Sbjct: 450 AFQTMRVEGVSSNYITVVSVLSACLLPGDL-LERGKPLHAYIVSAGFESDEHVKNSLITM 508
Query: 528 YAQAGD 533
YA+ GD
Sbjct: 509 YAKCGD 514
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 35/268 (13%)
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
Y++ G + AR LFD P +N V W T++SG G E + KM + G+KP V+
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 318 ISILTACAESG-MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
S++TAC SG M G ++H V + V A + +Y G + + +F +M
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
+++VSW S++ G+ G+ E+ ++++ M EG ++ + ++ +C GR
Sbjct: 122 -DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 437 NYF---------------NSMEKVYGIVPQIEHYGCMIDLLS---------------RGG 466
NS+ + G + +++ + D +S + G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 467 HLEEAFE---LLRSMPVEPNAIVVGTLL 491
H+EE+F L+R E N+ V TLL
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLL 268
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 156/378 (41%), Gaps = 43/378 (11%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
L+ K +HA ++ A D +V LI ++ C +SS+ ++FN + N+ +N+++ A
Sbjct: 480 LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAA 539
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
+A +G H M+ GV D F++ L A + L Q +H K GF
Sbjct: 540 NAHHG-HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH 598
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
D F+ N+ D YS+CG +G +++ R +WN +I L R G + F E
Sbjct: 599 DSFIFNAAADMYSKCGEIG--EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHE 656
Query: 212 MPERDM----VSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMA 267
M E + V++ ++L + G ++K +D + +
Sbjct: 657 MLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIAR---------------------- 694
Query: 268 RMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAES 327
D E + +I G + EA KM +KP+D V S+L +C
Sbjct: 695 ----DFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMP---MKPNDLVWRSLLASCKIH 747
Query: 328 GMLGLGKKIHASVQRCRFR-CSTKVLNAFIDMYAKCGCLDAAFGIFSKM----TGKKDLV 382
G L G+K ++ + S VL++ +M+A G + + +M KK
Sbjct: 748 GNLDRGRKAAENLSKLEPEDDSVYVLSS--NMFATTGRWEDVENVRKQMGFKNIKKKQAC 805
Query: 383 SWNSMIHGFGVHGQGEKA 400
SW + G G++
Sbjct: 806 SWVKLKDKVSSFGIGDRT 823
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 233/446 (52%), Gaps = 27/446 (6%)
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSM 192
SL ++ IHA + G + + L+ S V + A+ + + +N++
Sbjct: 21 SLQNLKQIHAQIITIGLSHHTYPLSKLLHLSS---TVCLSYALSILRQIPNPSVFLYNTL 77
Query: 193 IGGLVRGGDLDG---AFKLFDEM--PERDMVSWNTML-DGYAKAGEMNKAFELFDRMLQW 246
I +V + AF L+D++ + V N KA + + R L
Sbjct: 78 ISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHA 137
Query: 247 NIISW-----------STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFM 295
+++ + + +V Y+ G + AR LF++ E +L W T+++ YA +
Sbjct: 138 HVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEI 197
Query: 296 ---KEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL 352
+E +L+ +M+ ++P++ L++++ +CA G G H V + + V
Sbjct: 198 DSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVG 254
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGF 412
+ ID+Y+KCGCL A +F +M+ ++D+ +N+MI G VHG G++ +EL+ S++ +G
Sbjct: 255 TSLIDLYSKCGCLSFARKVFDEMS-QRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGL 313
Query: 413 EPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAF 472
PD TF+ + AC+H+GLVD+G FNSM+ VYGI P++EHYGC++DLL R G LEEA
Sbjct: 314 VPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAE 373
Query: 473 ELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAG 532
E ++ MPV+PNA + + LG+ + H D E +HL L + GN+ LLSNIYA
Sbjct: 374 ECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVN 433
Query: 533 DWMNVASVRLQMKNAGGQKPSGASSI 558
W +V R MK+ K G S++
Sbjct: 434 RWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 189/402 (47%), Gaps = 27/402 (6%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLI-AAFSLCRHISSAVNVFNQVPYPN 81
L + +C +L +KQIHAQ++ L Y KL+ + ++C +S A+++ Q+P P+
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVC--LSYALSILRQIPNPS 70
Query: 82 VHLYNSLIRA--HALNGSHPSLTFSTFFHM---QREGVYPDNFTYPFLLKACTGPSSLPL 136
V LYN+LI + N + L FS + + + V P+ FTYP L KA +
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 137 V-QMIHAHVEKF--GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMI 193
+ +HAHV KF D FV +L+ Y+ CG + A LF + E D TWN+++
Sbjct: 131 HGRALHAHVLKFLEPVNHDRFVQAALVGFYANCG--KLREARSLFERIREPDLATWNTLL 188
Query: 194 GGLVRGGDLDG---AFKLFDEMPER-DMVSWNTMLDGYAKAGEMNKA----FELFDRMLQ 245
++D LF M R + +S ++ A GE + + L
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 246 WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM 305
N ++++ YS+ G + AR +FD+ ++++ + +I G A GF +E LY +
Sbjct: 249 LNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL 308
Query: 306 EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCG 363
GL PD + ++AC+ SG++ G +I S+ + + KV +D+ + G
Sbjct: 309 ISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM-KAVYGIEPKVEHYGCLVDLLGRSG 367
Query: 364 CLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHG---QGEKALE 402
L+ A KM K + W S + HG +GE AL+
Sbjct: 368 RLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALK 409
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 116/297 (39%), Positives = 181/297 (60%), Gaps = 3/297 (1%)
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
S + Y +AG+ + AR +FD+ PE+ L W II G G EA ++ M+ +GL+
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAF 369
PDD ++S+ +C G L L ++H V + + + + LN+ IDMY KCG +D A
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 370 GIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHA 429
IF +M ++++VSW+SMI G+ +G +ALE F M G P+K TF+G+L AC H
Sbjct: 276 HIFEEMR-QRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHG 334
Query: 430 GLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGT 489
GLV++G+ YF M+ + + P + HYGC++DLLSR G L+EA +++ MP++PN +V G
Sbjct: 335 GLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGC 394
Query: 490 LLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKN 546
L+G C DVE+A ++ ++ +L P + G + +L+N+YA G W +V VR MK
Sbjct: 395 LMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKT 451
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 179/387 (46%), Gaps = 44/387 (11%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
L C++L V++IH + ++ + +Q YP L+
Sbjct: 54 LSNCTSLARVRRIHGDIFRSR--------------------------ILDQ--YPIAFLW 85
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
N+++R++ + S P + M R V PD ++ P ++KA L + +H+
Sbjct: 86 NNIMRSYIRHES-PLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
+ GF D F + I Y + G + A ++F ER +WN++IGGL G + A
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGE--FENARKVFDENPERKLGSWNAIIGGLNHAGRANEA 202
Query: 206 FKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW------NIISWSTMV 255
++F +M E D + ++ G+++ AF+L +LQ +I+ ++++
Sbjct: 203 VEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLI 262
Query: 256 CGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDG 315
Y + G MD+A +F++ ++N+V W+++I GYA G EA + +M E G++P+
Sbjct: 263 DMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKI 322
Query: 316 VLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFS 373
+ +L+AC G++ GK A + + F + +D+ ++ G L A +
Sbjct: 323 TFVGVLSACVHGGLVEEGKTYFA-MMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 374 KMTGKKDLVSWNSMIHGFGVHGQGEKA 400
+M K +++ W ++ G G E A
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFGDVEMA 408
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 224/441 (50%), Gaps = 44/441 (9%)
Query: 202 LDGAFKLFDEMPERDMVS---WNTMLDGYAKAGEMNKAFELFDRML-------------- 244
LD A K+FD++ + +++ W M GY++ G A ++ ML
Sbjct: 183 LDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVA 242
Query: 245 -------------------------QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL 279
+ + + ++ ++ Y +G D AR +FD E+N+
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNV 302
Query: 280 VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHAS 339
V W ++IS ++K + E L+ KM+E + L +IL AC+ L GK+IHA
Sbjct: 303 VTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 340 VQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEK 399
+ + + + +LN+ +DMY KCG ++ + +F M KDL SWN M++ + ++G E+
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVML-TKDLASWNIMLNCYAINGNIEE 421
Query: 400 ALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMI 459
+ LF M+ G PD TF+ LL C+ GL + G + F M+ + + P +EHY C++
Sbjct: 422 VINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLV 481
Query: 460 DLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPG 519
D+L R G ++EA +++ +MP +P+A + G+LL +CR+H +V + ++ LF L P +PG
Sbjct: 482 DILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPG 541
Query: 520 NFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDD 579
N+ ++SNIYA A W NV +R MK G +K +G S + F ++ D
Sbjct: 542 NYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSD 601
Query: 580 IYQMI-GRLVHDLRQVGYVPG 599
Y+ + L + + GY P
Sbjct: 602 EYKKVWTELQEAIEKSGYSPN 622
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 183/384 (47%), Gaps = 26/384 (6%)
Query: 56 KLIAAFSLCRHISSAVNVFNQVPYPNV---HLYNSLIRAHALNGSHPSLTFSTFFHMQRE 112
KLI FS+CR + A +F+ V ++ ++ ++ ++ NGS P + M
Sbjct: 172 KLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGS-PRDALIVYVDMLCS 230
Query: 113 GVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGID 172
+ P NF+ LKAC L + + IHA + K D V N L+ Y G D
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESG--LFD 288
Query: 173 GAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMV--SW---NTMLDGY 227
A ++F M ER+ VTWNS+I L + + F LF +M E +M+ SW T+L
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQE-EMIGFSWATLTTILPAC 347
Query: 228 AKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWT 283
++ + E+ ++L+ ++ ++++ Y + G+++ +R +FD K+L W
Sbjct: 348 SRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWN 407
Query: 284 TIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRC 343
+++ YA G ++E L++ M E+G+ PD +++L+ C+++G+ G + + +
Sbjct: 408 IMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM-KT 466
Query: 344 RFRCSTKVLN--AFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQ---GE 398
FR S + + +D+ + G + A + M K W S+++ +HG GE
Sbjct: 467 EFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGE 526
Query: 399 -KALELFSSMVHEGFEPDKYTFIG 421
A ELF V E P Y +
Sbjct: 527 IAAKELF---VLEPHNPGNYVMVS 547
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 27/275 (9%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI- 89
+L + + IHAQ++K D V L+ + A VF+ + NV +NSLI
Sbjct: 251 DLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLIS 310
Query: 90 ------RAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
R H + F+ F MQ E + T +L AC+ ++L + IHA
Sbjct: 311 VLSKKVRVHEM--------FNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQ 362
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
+ K D+ + NSL+D Y +CG V + + R+F M +D +WN M+ G+++
Sbjct: 363 ILKSKEKPDVPLLNSLMDMYGKCGEV--EYSRRVFDVMLTKDLASWNIMLNCYAINGNIE 420
Query: 204 GAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-----WSTM 254
LF+ M E D +++ +L G + G LF+RM +S ++ +
Sbjct: 421 EVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACL 480
Query: 255 VCGYSRAGDMDMARMLFDKCPEK-NLVLWTTIISG 288
V RAG + A + + P K + +W ++++
Sbjct: 481 VDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNS 515
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/532 (28%), Positives = 257/532 (48%), Gaps = 40/532 (7%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRA 91
+ L +Q+H + K + ++ L+ + + A VF+++P P+V +NSL+
Sbjct: 71 VSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSG 130
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
+ +G F + R V+P+ F++ L AC PL IH+ + K G +
Sbjct: 131 YVQSGRFQE-GICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEK 189
Query: 152 -DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
++ V N LID Y +CG +D A+ +F MEE+D V+WN+++ R G L+ F
Sbjct: 190 GNVVVGNCLIDMYGKCGF--MDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFH 247
Query: 211 EMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARML 270
+MP D V++N ++D + K+G D + A +
Sbjct: 248 QMPNPDTVTYNELIDAFVKSG-------------------------------DFNNAFQV 276
Query: 271 FDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGML 330
P N W TI++GY EAT + KM +G++ D+ L +L A A ++
Sbjct: 277 LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVV 336
Query: 331 GLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHG 390
G IHA + V +A IDMY+KCG L A +F M +K+L+ WN MI G
Sbjct: 337 PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMP-RKNLIVWNEMISG 395
Query: 391 FGVHGQGEKALELFSSMVHEGF-EPDKYTFIGLLCACTHAGL-VDKGRNYFNSMEKVYGI 448
+ +G +A++LF+ + E F +PD++TF+ LL C+H + ++ YF M Y I
Sbjct: 396 YARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRI 455
Query: 449 VPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSE 508
P +EH +I + + G + +A ++++ + + LLGAC D++ A+ ++
Sbjct: 456 KPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAA 515
Query: 509 HLFKLVPSDPGN--FSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
+ +L +D + ++SN+YA W V +R M+ +G K G+S I
Sbjct: 516 KMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 124/269 (46%), Gaps = 14/269 (5%)
Query: 282 WTTIISGYAE---KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA 338
W+TI+ A G ++ A L + G KPD L+ +L G + L +++H
Sbjct: 24 WSTIVPALARFGSIGVLRAAVELIND----GEKPDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
V + F +T++ N+ + Y L+ A +F +M D++SWNS++ G+ G+ +
Sbjct: 80 YVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP-DPDVISWNSLVSGYVQSGRFQ 138
Query: 399 KALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCM 458
+ + LF + P++++F L AC L G + + K+ + C+
Sbjct: 139 EGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 459 IDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPS-D 517
ID+ + G +++A + + M E + + ++ +C + +EL F +P+ D
Sbjct: 199 IDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELGL----WFFHQMPNPD 253
Query: 518 PGNFSLLSNIYAQAGDWMNVASVRLQMKN 546
++ L + + ++GD+ N V M N
Sbjct: 254 TVTYNELIDAFVKSGDFNNAFQVLSDMPN 282
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 189/342 (55%), Gaps = 3/342 (0%)
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
Y+ +GD+ A +LF ++L+ W +ISGY +KG +E +Y M + + PD
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 318 ISILTACAESGMLGLGKKIHAS-VQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
S+ AC+ L GK+ HA ++RC + + V +A +DMY KC +F +++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRC-IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLS 271
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
+++++W S+I G+G HG+ + L+ F M EG P+ TF+ +L AC H GLVDKG
Sbjct: 272 -TRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGW 330
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRM 496
+F SM++ YGI P+ +HY M+D L R G L+EA+E + P + + V G+LLGACR+
Sbjct: 331 EHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 497 HNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
H +V+L + +L P++ GN+ + +N YA G + VR +M+NAG +K G S
Sbjct: 391 HGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYS 450
Query: 557 SIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
I F D SH S+ IY+ + + + Y P
Sbjct: 451 QIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMDIDYYP 492
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 137/303 (45%), Gaps = 12/303 (3%)
Query: 113 GVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGID 172
G+ + TY LL+ C + IHA + GF + ++ L+ Y+ G +
Sbjct: 103 GLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 173 GAMRLFSAMEERDAVTWNSMIGGLVRGG-DLDGAFKLFDEMPERDMVSWNTMLDGYAKAG 231
G LF +++ RD + WN+MI G V+ G + +G F +D R + T +
Sbjct: 163 GI--LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 232 EMNKAFE-------LFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTT 284
+++ + R ++ NII S +V Y + +FD+ +N++ WT+
Sbjct: 221 ALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTS 280
Query: 285 IISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR-C 343
+ISGY G + E ++KM+E G +P+ + +LTAC G++ G + S++R
Sbjct: 281 LISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDY 340
Query: 344 RFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALEL 403
+ A +D + G L A+ K K+ W S++ +HG K LEL
Sbjct: 341 GIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN-VKLLEL 399
Query: 404 FSS 406
++
Sbjct: 400 AAT 402
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 141/324 (43%), Gaps = 47/324 (14%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
K+IHAQ+ + Y+ KL+ ++L + +A +F + ++ +N++I +
Sbjct: 128 KRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQK 187
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
G F ++ M++ + PD +T+ + +AC+ L + HA + K +I V
Sbjct: 188 GLEQEGLF-IYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
++L+D Y +C DG R+F + R+ +TW S+I G G + K F++M E
Sbjct: 247 DSALVDMYFKCSSFS-DG-HRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE 304
Query: 216 ----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-----WSTMVCGYSRAGDMDM 266
+ V++ +L G ++K +E F M + I ++ MV RAG +
Sbjct: 305 GCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 267 ARMLFDKCP-EKNLVLWTTII----------------------------------SGYAE 291
A K P +++ +W +++ +GYA
Sbjct: 365 AYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYAS 424
Query: 292 KGFMKEATVLYDKMEEAGLKPDDG 315
G + A+ + KME AG+K D G
Sbjct: 425 CGLREAASKVRRKMENAGVKKDPG 448
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 4/152 (2%)
Query: 286 ISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRF 345
+ G G +KEA L + +GL+ + +L C + GK+IHA + F
Sbjct: 83 LKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 346 RCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFS 405
+ + + +YA G L A GI + +DL+ WN+MI G+ G ++ L ++
Sbjct: 140 ALNEYLKVKLLILYALSGDLQTA-GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYY 198
Query: 406 SMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN 437
M PD+YTF + AC+ ++ G+
Sbjct: 199 DMRQNRIVPDQYTFASVFRACSALDRLEHGKR 230
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 130/362 (35%), Positives = 209/362 (57%), Gaps = 19/362 (5%)
Query: 242 RMLQWN-IISWSTMVCG-YSRAGDMDMARMLFDKCPEK-NLVLWTTIISGYAEKGFMKEA 298
R L +N +I T + G YS GD+D AR +FD+ PEK N+VLWT +IS Y E EA
Sbjct: 92 RKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEA 151
Query: 299 TVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA-SVQRCR-FRCSTKVLNAFI 356
L+ +ME ++ D ++ L+ACA+ G + +G++I++ S++R R + N+ +
Sbjct: 152 IELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLL 211
Query: 357 DMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMV------HE 410
+MY K G + A +F + + +KD+ ++ SMI G+ ++GQ +++LELF M
Sbjct: 212 NMYVKSGETEKARKLFDE-SMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
P+ TFIG+L AC+H+GLV++G+ +F SM Y + P+ H+GCM+DL R GHL++
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQ 530
A E + MP++PN ++ TLLGAC +H +VEL + +F+L G++ LSNIYA
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYAS 390
Query: 531 AGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHD 590
G W + +R +++ ++ G S I F S P ++D M+G +
Sbjct: 391 KGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEFV----SGPDNNDEQLMMGEISEV 443
Query: 591 LR 592
LR
Sbjct: 444 LR 445
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 146/335 (43%), Gaps = 52/335 (15%)
Query: 22 KLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYP- 80
K+ + + S+LD +QIHA + K + + + L+ +S + A VF++ P
Sbjct: 72 KVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQ 130
Query: 81 NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
N+ L+ ++I A+ N + F M+ E + D L AC + L VQM
Sbjct: 131 NIVLWTAMISAYTENENSVE-AIELFKRMEAEKIELDGVIVTVALSAC---ADLGAVQM- 185
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
E+I YSR I RL AM D NS++ V+ G
Sbjct: 186 ---------GEEI---------YSR----SIKRKRRL--AM---DLTLRNSLLNMYVKSG 218
Query: 201 DLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRML-----QWNIISWST-- 253
+ + A KLFDE +D+ ++ +M+ GYA G+ ++ ELF +M Q +I+ +
Sbjct: 219 ETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVT 278
Query: 254 -----MVCGYS---RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM 305
M C +S G M+ D + + ++ + G +K+A ++M
Sbjct: 279 FIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQM 338
Query: 306 EEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
+KP+ + ++L AC+ G + LG+++ +
Sbjct: 339 P---IKPNTVIWRTLLGACSLHGNVELGEEVQRRI 370
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 315 GVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSK 374
VL +I + A+ G++IHA V++ F ++ + + Y+ G +D A +F +
Sbjct: 66 SVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDE 125
Query: 375 MTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDK 434
K+++V W +MI + + +A+ELF M E E D L AC G V
Sbjct: 126 TPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQM 185
Query: 435 GRN-YFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
G Y S+++ + + ++++ + G E+A +L
Sbjct: 186 GEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLF 227
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 211/379 (55%), Gaps = 6/379 (1%)
Query: 221 NTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
+ +L+ Y K + A FD N++S + ++ GY + + + A LF PE+++V
Sbjct: 132 SAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVV 191
Query: 281 LWTTIISGYAEKGFMKEA-TVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA- 338
W +I G+++ G +EA D + E + P++ +TA + G GK IHA
Sbjct: 192 TWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC 251
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG-KKDLVSWNSMIHGFGVHGQG 397
+++ R + V N+ I Y+KCG ++ + F+K+ ++++VSWNSMI G+ +G+G
Sbjct: 252 AIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRG 311
Query: 398 EKALELFSSMVHE-GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYG--IVPQIEH 454
E+A+ +F MV + P+ T +G+L AC HAGL+ +G YFN Y + ++EH
Sbjct: 312 EEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEH 371
Query: 455 YGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLV 514
Y CM+D+LSR G +EA EL++SMP++P LLG C++H++ LA+ + + +L
Sbjct: 372 YACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELD 431
Query: 515 PSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSH 574
P D ++ +LSN Y+ +W NV+ +R +MK G ++ +G S I F D ++
Sbjct: 432 PRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNN 491
Query: 575 PKSDDIYQMIGRLVHDLRQ 593
D++Y+M+ + L +
Sbjct: 492 ELKDEVYRMLALVSQHLEE 510
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 157/341 (46%), Gaps = 52/341 (15%)
Query: 42 LLKAHLHQDLYVAPKLIAAFSLCRHISS-----AVNVFNQVPYPNVHLYNSLIRAHALNG 96
L K H + V + L +HI S A VF+++P +V ++I
Sbjct: 13 LRKYHSSANALVTKSPNSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKES 72
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
H + F + G+ P+ FT+ ++ + T + L + +H + K G ++FV
Sbjct: 73 RHVEAS-QAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVG 131
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERD 216
+++++ Y + + A R F + + V+ ++I G ++ + + A LF MPER
Sbjct: 132 SAVLNCYVKLST--LTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERS 189
Query: 217 MVSWNTMLDGYAKAGEMNKAFELFDRML-------------------------------- 244
+V+WN ++ G+++ G +A F ML
Sbjct: 190 VVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIH 249
Query: 245 ---------QWNIISWSTMVCGYSRAGDMDMARMLFDKCPE--KNLVLWTTIISGYAEKG 293
++N+ W++++ YS+ G+M+ + + F+K E +N+V W ++I GYA G
Sbjct: 250 ACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNG 309
Query: 294 FMKEATVLYDKM-EEAGLKPDDGVLISILTACAESGMLGLG 333
+EA +++KM ++ L+P++ ++ +L AC +G++ G
Sbjct: 310 RGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEG 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 20/249 (8%)
Query: 57 LIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVY- 115
LI+ + A+++F +P +V +N++I + G + +TF M REGV
Sbjct: 165 LISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEE-AVNTFVDMLREGVVI 223
Query: 116 PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKF-GFYEDIFVPNSLIDSYSRCGGVGIDGA 174
P+ T+P + A + +S + IHA KF G ++FV NSLI YS+CG ++ +
Sbjct: 224 PNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN--MEDS 281
Query: 175 MRLFSAMEE--RDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTML-------- 224
+ F+ +EE R+ V+WNSMI G G + A +F++M + + N +
Sbjct: 282 LLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Query: 225 --DGYAKAGEM--NKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCP-EKNL 279
G + G M NKA +D + ++ MV SR+G A L P + +
Sbjct: 342 NHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGI 401
Query: 280 VLWTTIISG 288
W ++ G
Sbjct: 402 GFWKALLGG 410
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 130/303 (42%), Gaps = 37/303 (12%)
Query: 263 DMDMAR---MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
D D+ R +FD+ PE +++ T +I + ++ EA+ + ++ G++P++ +
Sbjct: 39 DSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGT 98
Query: 320 ILTACAESGMLGLGKKIH---------------ASVQRCRFRCSTKV------------- 351
++ + S + LGK++H ++V C + ST
Sbjct: 99 VIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPN 158
Query: 352 ---LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMV 408
+ I Y K + A +F M ++ +V+WN++I GF G+ E+A+ F M+
Sbjct: 159 VVSITNLISGYLKKHEFEEALSLFRAMP-ERSVVTWNAVIGGFSQTGRNEEAVNTFVDML 217
Query: 409 HEGFE-PDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGH 467
EG P++ TF + A ++ G++ K G + + +I S+ G+
Sbjct: 218 REGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGN 277
Query: 468 LEEAFELLRSMPVEPNAIVVGTLLGACRMHNDV-ELARALSEHLFKLVPSDPGNFSLLSN 526
+E++ + E IV + HN E A A+ E + K P N ++L
Sbjct: 278 MEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGV 337
Query: 527 IYA 529
++A
Sbjct: 338 LFA 340
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/569 (28%), Positives = 263/569 (46%), Gaps = 82/569 (14%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQ--VPYPNVHLYNSL 88
+LD KQ+H+ ++KA V LI + C+ + A VF + V + +N +
Sbjct: 204 SLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVV 263
Query: 89 IRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFG 148
I L G + F M + P + T+ ++ +C S + +H K G
Sbjct: 264 I--DGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTG 318
Query: 149 FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKL 208
+ + V N+ + YS G A ++F ++EE+D VTWN+MI + A +
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFG--AAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 209 FDEM------PER----------------DMVSW--------------NTMLDGYAKAGE 232
+ M P+ +MV N ++ Y+K G+
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQ 436
Query: 233 MNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEK 292
+ KA LF+R L+ N+ISW+ IISG+
Sbjct: 437 IEKADLLFERSLRKNLISWN-------------------------------AIISGFYHN 465
Query: 293 GFMKEATVLYDKMEEAGLK--PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
GF E + + E+ ++ PD L ++L+ C + L LG + HA V R T
Sbjct: 466 GFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETL 525
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
+ NA I+MY++CG + + +F++M+ +KD+VSWNS+I + HG+GE A+ + +M E
Sbjct: 526 IGNALINMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDE 584
Query: 411 G-FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLE 469
G PD TF +L AC+HAGLV++G FNSM + +G++ ++H+ C++DLL R GHL+
Sbjct: 585 GKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLD 644
Query: 470 EAFELLR--SMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNI 527
EA L++ + V L AC H D++L + +++ L + DP + LSNI
Sbjct: 645 EAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNI 704
Query: 528 YAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
YA AG W R + G K G S
Sbjct: 705 YAGAGMWKEAEETRRAINMIGAMKQRGCS 733
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 149/559 (26%), Positives = 240/559 (42%), Gaps = 78/559 (13%)
Query: 50 DLYVAPKLIAAFSLCRHISSAVNVFNQVP-YPNVHLYNSLIRAHALNGSHPSLTFSTFFH 108
D+Y L++A I A VF+++P +V ++N++I +G H + + F
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHET-SVELFRE 180
Query: 109 MQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGG 168
M + GV D F + +L C SL + +H+ V K GF+ V N+LI Y C
Sbjct: 181 MHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQV 239
Query: 169 VGIDGAMRLFSA-MEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE-----RDMVSWNT 222
V +D + + RD VT+N +I GL G D + +F +M E D+ +
Sbjct: 240 V-VDACLVFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSV 297
Query: 223 MLD-GYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL 281
M A G + ++ ++S +TM YS D A +F+ EK+LV
Sbjct: 298 MGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTM-YSSFEDFGAAHKVFESLEEKDLVT 356
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ 341
W T+IS Y + K A +Y +M G+KPD+ S+L + +L + VQ
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM-------VQ 409
Query: 342 RC--RFRCSTK--VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQG 397
C +F S+K + NA I Y+K G ++ A +F + + +K+L+SWN++I GF +G
Sbjct: 410 ACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFER-SLRKNLISWNAIISGFYHNGFP 468
Query: 398 EKALELFSSMVHEGFE--PDKYTFIGLLCAC-----------THA--------------- 429
+ LE FS ++ PD YT LL C THA
Sbjct: 469 FEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGN 528
Query: 430 ---------GLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPV 480
G + FN M + + + +I SR G E A ++M
Sbjct: 529 ALINMYSQCGTIQNSLEVFNQMSE-----KDVVSWNSLISAYSRHGEGENAVNTYKTMQD 583
Query: 481 E----PNAIVVGTLLGACR----MHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAG 532
E P+A +L AC + +E+ ++ E F V + +FS L ++ +AG
Sbjct: 584 EGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVE--FHGVIRNVDHFSCLVDLLGRAG 641
Query: 533 DWMNVAS-VRLQMKNAGGQ 550
S V++ K G +
Sbjct: 642 HLDEAESLVKISEKTIGSR 660
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 189/422 (44%), Gaps = 64/422 (15%)
Query: 116 PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM 175
PD ++ + +H + + G V N+L+ Y R G +
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLA--SLK 112
Query: 176 RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVS-WNTMLDGYAKAGEMN 234
+ F ++E D +W +++ + GD++ AF++FD+MPERD V+ WN M+ G ++G
Sbjct: 113 KKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHE 172
Query: 235 KAFELFDRMLQWNI----ISWSTMV--CGYSRAGDMDMAR-------------------- 268
+ ELF M + + ++T++ C Y G +D +
Sbjct: 173 TSVELFREMHKLGVRHDKFGFATILSMCDY---GSLDFGKQVHSLVIKAGFFIASSVVNA 229
Query: 269 ---------MLFDKC--------PEKNLVLWTTIISGYAEKGFMKEATVL-YDKMEEAGL 310
++ D C ++ V + +I G A GF ++ ++L + KM EA L
Sbjct: 230 LITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASL 287
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
+P D +S++ +C+ + M G ++H + + T V NA + MY+ AA
Sbjct: 288 RPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHK 344
Query: 371 IFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG 430
+F + +KDLV+WN+MI + G+ A+ ++ M G +PD++TF LL
Sbjct: 345 VFESLE-EKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLD 403
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA---FEL-LRSMPVEPNAIV 486
+++ + +G+ +IE +I S+ G +E+A FE LR + NAI+
Sbjct: 404 VLE----MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAII 459
Query: 487 VG 488
G
Sbjct: 460 SG 461
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 178/406 (43%), Gaps = 36/406 (8%)
Query: 16 RRLLEEKL--------CTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHI 67
R++LE L + CS + Q+H +K + V+ + +S
Sbjct: 280 RKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDF 339
Query: 68 SSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKA 127
+A VF + ++ +N++I ++ S S + M GV PD FT+ LL
Sbjct: 340 GAAHKVFESLEEKDLVTWNTMISSYNQAKLGKS-AMSVYKRMHIIGVKPDEFTFGSLLAT 398
Query: 128 CTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAV 187
L +++M+ A + KFG I + N+LI +YS+ G I+ A LF ++ +
Sbjct: 399 SL---DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNG--QIEKADLLFERSLRKNLI 453
Query: 188 TWNSMIGGLVRGGDLDGAFKLFDEMPER------DMVSWNTMLDGYAKA-----GEMNKA 236
+WN++I G G + F + E D + +T+L G A
Sbjct: 454 SWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHA 513
Query: 237 FELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
+ L + +I + ++ YS+ G + + +F++ EK++V W ++IS Y+ G +
Sbjct: 514 YVLRHGQFKETLIG-NALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGE 572
Query: 297 EATVLYDKMEEAG-LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
A Y M++ G + PD ++L+AC+ +G++ G +I S+ F + ++ F
Sbjct: 573 NAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSM--VEFHGVIRNVDHF 630
Query: 356 ---IDMYAKCGCLDAA---FGIFSKMTGKKDLVSWNSMIHGFGVHG 395
+D+ + G LD A I K G + V W ++ HG
Sbjct: 631 SCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWW-ALFSACAAHG 675
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 11/217 (5%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLI 89
S+L L Q HA +L+ ++ + LI +S C I +++ VFNQ+ +V +NSLI
Sbjct: 503 SSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLI 562
Query: 90 RAHALNGSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLPL-VQMIHAHVEKF 147
A++ +G + +T+ MQ EG V PD T+ +L AC+ + +++ ++ VE
Sbjct: 563 SAYSRHGEGEN-AVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFH 621
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE---RDAVTWNSMIGGLVRGGDL-- 202
G ++ + L+D R G +D A L E+ W ++ GDL
Sbjct: 622 GVIRNVDHFSCLVDLLGRAG--HLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKL 679
Query: 203 -DGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFE 238
KL E + D + + + YA AG +A E
Sbjct: 680 GKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEE 716
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 162/530 (30%), Positives = 253/530 (47%), Gaps = 47/530 (8%)
Query: 61 FSLCRH--ISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQRE--GVYP 116
+ CR+ + A +F ++P N+ + ++I A N + F M+++ V P
Sbjct: 239 YGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYRE-ALMLFLEMKKDVDAVSP 297
Query: 117 DNFTYPFLLKAC--TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGA 174
+ T L AC G L + +HA V G +E +
Sbjct: 298 NGETLISLAYACGGLGVEFRRLGEQLHAQVISNG-WETV--------------------- 335
Query: 175 MRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMN 234
+ D S++ G + A L +E D+ S N +++ Y K G++
Sbjct: 336 --------DHDGRLAKSLVHMYASSGLIASAQSLLNE--SFDLQSCNIIINRYLKNGDLE 385
Query: 235 KAFELFDRMLQW-NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKG 293
+A LF+R+ + +SW++M+ GY AGD+ A LF K +K+ V WT +ISG +
Sbjct: 386 RAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNE 445
Query: 294 FMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCR--FRCSTKV 351
EA L M GLKP + +L++ + L GK IH + + + +
Sbjct: 446 LFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLIL 505
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
N+ + MYAKCG ++ A+ IF+KM +KD VSWNSMI G HG +KAL LF M+ G
Sbjct: 506 QNSLVSMYAKCGAIEDAYEIFAKMV-QKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSG 564
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
+P+ TF+G+L AC+H+GL+ +G F +M++ Y I P I+HY MIDLL R G L+EA
Sbjct: 565 KKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEA 624
Query: 472 FELLRSMPVEPNAIVVGTLLGACRMH---NDVE-LARALSEHLFKLVPSDPGNFSLLSNI 527
E + ++P P+ V G LLG C ++ D E +A + L +L P + L N+
Sbjct: 625 EEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNV 684
Query: 528 YAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKS 577
YA G +R +M G +K G S + F D S ++
Sbjct: 685 YAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEA 734
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 185/389 (47%), Gaps = 72/389 (18%)
Query: 172 DGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAG 231
+ A+ LF M ER+ V+WN+++ GL+R GD++ A ++FD MP RD+VSWN M+ GY +
Sbjct: 155 EDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIEND 214
Query: 232 EMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAE 291
M +A LF M + N+++W++MV GY R GD+ A LF + PE+N+V WT +ISG+A
Sbjct: 215 GMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAW 274
Query: 292 KGFMKEATVLYDKMEE--AGLKPDDGVLISILTACAESGM--LGLGKKIHASVQRCRFR- 346
+EA +L+ +M++ + P+ LIS+ AC G+ LG+++HA V +
Sbjct: 275 NELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWET 334
Query: 347 ---------------------CSTKVL----------NAFIDMYAKCGCLDAAFGIFSKM 375
S + L N I+ Y K G L+ A +F ++
Sbjct: 335 VDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERV 394
Query: 376 TGKKDLVSWNSMIHGFGVHGQGEKALELF------------------------------- 404
D VSW SMI G+ G +A LF
Sbjct: 395 KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLL 454
Query: 405 SSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIV-PQIEHYGCMIDLLS 463
S MV G +P T+ LL + +D+G++ + K P + ++ + +
Sbjct: 455 SDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYA 514
Query: 464 RGGHLEEAFELLRSM----PVEPNAIVVG 488
+ G +E+A+E+ M V N++++G
Sbjct: 515 KCGAIEDAYEIFAKMVQKDTVSWNSMIMG 543
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 183/407 (44%), Gaps = 61/407 (14%)
Query: 139 MIHAH-----VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMI 193
++HA + + G + SL+ Y++ G +D A LF M ER+ VT N+M+
Sbjct: 58 LVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGY--LDEARVLFEVMPERNIVTCNAML 115
Query: 194 GGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWST 253
G V+ ++ A+ LF EMP +++VSW ML G A ELFD M + N++SW+T
Sbjct: 116 TGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNT 174
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
+V G R GDM+ A+ +FD P +++V W +I GY E M+EA +L+ M E
Sbjct: 175 LVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----- 229
Query: 314 DGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFS 373
+ + + Y + G + A+ +F
Sbjct: 230 ----------------------------------NVVTWTSMVYGYCRYGDVREAYRLFC 255
Query: 374 KMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH--EGFEPDKYTFIGLLCACTHAGL 431
+M ++++VSW +MI GF + +AL LF M + P+ T I L AC G+
Sbjct: 256 EMP-ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGV 314
Query: 432 VDKGRNYFNSMEKVYGIVPQIEHYG----CMIDLLSRGGHLEEAFELL-RSMPVEPNAIV 486
+ + + ++H G ++ + + G + A LL S ++ I+
Sbjct: 315 EFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNII 374
Query: 487 VGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGD 533
+ L + D+E A L E + L D +++ + + Y +AGD
Sbjct: 375 INRYLK----NGDLERAETLFERVKSL--HDKVSWTSMIDGYLEAGD 415
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 202/346 (58%), Gaps = 2/346 (0%)
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
S++V Y++ G++ AR +FD+ P++N+V W+ ++ GYA+ G +EA L+ + L
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLA 214
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
+D S+++ CA S +L LG++IH + F S+ V ++ + +Y+KCG + A+ +
Sbjct: 215 VNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQV 274
Query: 372 FSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGL 431
F+++ K+L WN+M+ + H +K +ELF M G +P+ TF+ +L AC+HAGL
Sbjct: 275 FNEVP-VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGL 333
Query: 432 VDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLL 491
VD+GR YF+ M K I P +HY ++D+L R G L+EA E++ +MP++P V G LL
Sbjct: 334 VDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 492 GACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQK 551
+C +H + ELA ++ +F+L P G LSN YA G + + A R +++ G +K
Sbjct: 393 TSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKK 452
Query: 552 PSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYV 597
+G S + F + H KS +IY+ + L ++ + GY+
Sbjct: 453 ETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYI 498
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 177/403 (43%), Gaps = 21/403 (5%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q+H ++K+ L VA LI +S + + F P + ++S+I A N
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQN- 94
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
P ++ M + PD+ P K+C S + + +H K G+ D+FV
Sbjct: 95 ELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVG 154
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERD 216
+SL+D Y++CG + A ++F M +R+ VTW+ M+ G + G+ + A LF E +
Sbjct: 155 SSLVDMYAKCGEIVY--ARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN 212
Query: 217 MVSWNTMLDGYAKAGEMNKAFELFDRM--------LQWNIISWSTMVCGYSRAGDMDMAR 268
+ + + EL ++ + S++V YS+ G + A
Sbjct: 213 LAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAY 272
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG 328
+F++ P KNL +W ++ YA+ ++ L+ +M+ +G+KP+ +++L AC+ +G
Sbjct: 273 QVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAG 332
Query: 329 MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
++ G+ ++ R + K + +DM + G L A + + M W +++
Sbjct: 333 LVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGL 431
VH E A F DK +G + + H L
Sbjct: 393 TSCTVHKNTELA----------AFAADKVFELGPVSSGMHISL 425
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 117/235 (49%), Gaps = 3/235 (1%)
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
+R F+ P+K+ W++IIS +A+ + KM L+PDD VL S +CA
Sbjct: 69 SRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAI 128
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS 386
+G+ +H + + V ++ +DMYAKCG + A +F +M ++++V+W+
Sbjct: 129 LSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSG 187
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
M++G+ G+ E+AL LF + E + Y+F ++ C ++ L++ GR + +
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ-IHGLSIKS 246
Query: 447 GIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVE 501
++ L S+ G E A+++ +PV+ N + +L A H+ +
Sbjct: 247 SFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAYAQHSHTQ 300
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 29 CSN---LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
C+N L+L +QIH +K+ +V L++ +S C A VFN+VP N+ ++
Sbjct: 227 CANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIW 286
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACT 129
N++++A+A + SH F M+ G+ P+ T+ +L AC+
Sbjct: 287 NAMLKAYAQH-SHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 168/570 (29%), Positives = 278/570 (48%), Gaps = 33/570 (5%)
Query: 49 QDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFH 108
Q++ +A LI ++ C +I A VF+ +P NV + +LI + G+ F F
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQE-GFCLFSS 152
Query: 109 MQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRC-G 167
M +P+ FT +L +C + +H K G + I+V N++I Y RC
Sbjct: 153 MLSH-CFPNEFTLSSVLTSCRYEPG----KQVHGLALKLGLHCSIYVANAVISMYGRCHD 207
Query: 168 GVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWN--TMLD 225
G A +F A++ ++ VTWNSMI A +F M D V ++ T+L+
Sbjct: 208 GAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRM-HSDGVGFDRATLLN 266
Query: 226 GYAK--------AGEMNKA-FELFDRMLQWNIISWSTMVCG----YSRAGD--MDMARML 270
+ E++K +L ++ +++ + + YS + D ++
Sbjct: 267 ICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLF 326
Query: 271 FDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGML 330
+ +++V W II+ +A + A L+ ++ + L PD S+L ACA
Sbjct: 327 MEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTA 385
Query: 331 GLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHG 390
IHA V + F T + N+ I YAKCG LD +F M + D+VSWNSM+
Sbjct: 386 RHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSR-DVVSWNSMLKA 444
Query: 391 FGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP 450
+ +HGQ + L +F M PD TFI LL AC+HAG V++G F SM + +P
Sbjct: 445 YSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLP 501
Query: 451 QIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHL 510
Q+ HY C+ID+LSR EA E+++ MP++P+A+V LLG+CR H + L + ++ L
Sbjct: 502 QLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKL 561
Query: 511 FKLV-PSDPGNFSLLSNIYAQAGDWMNVASVRL-QMKNAGGQKPSGASSIXXXXXXXXFT 568
+LV P++ ++ +SNIY G + N A++ + +M+ +K S F
Sbjct: 562 KELVEPTNSMSYIQMSNIYNAEGSF-NEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFA 620
Query: 569 VFDHSHPKSDDIYQMIGRLVHDLRQVGYVP 598
P + +Y+ + RL+ L+++GYVP
Sbjct: 621 SGGRHRPDKEAVYRELKRLISWLKEMGYVP 650
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 115/237 (48%), Gaps = 15/237 (6%)
Query: 196 LVRGGDLDGAFKLFDEMPE--RDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ------WN 247
LVR GD+ A LF P + ++ + A+ + L ML N
Sbjct: 36 LVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQN 95
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
+I + ++ Y++ G++ AR +FD PE+N+V WT +I+GY + G +E L+ M
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDA 367
P++ L S+LT+C GK++H + CS V NA I MY +C A
Sbjct: 156 HCF-PNEFTLSSVLTSCRYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAA 210
Query: 368 AFGIFS--KMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGL 422
A+ ++ + K+LV+WNSMI F G+KA+ +F M +G D+ T + +
Sbjct: 211 AYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNI 267
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 13/280 (4%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFS-LCRHISSAVNVFNQVPY-PNVHLYNSLIRAHAL 94
Q+H+ +K+ L VA LI +S + + +F ++ + ++ +N +I A A+
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAV 347
Query: 95 NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
P F +++E + PD +T+ +LKAC G + IHA V K GF D
Sbjct: 348 YD--PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTV 405
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP- 213
+ NSLI +Y++CG +D MR+F M+ RD V+WNSM+ G +D +F +M
Sbjct: 406 LNNSLIHAYAKCG--SLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDI 463
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW-----NIISWSTMVCGYSRAGDMDMAR 268
D ++ +L + AG + + +F M + + ++ ++ SRA A
Sbjct: 464 NPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAE 523
Query: 269 MLFDKCP-EKNLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
+ + P + + V+W ++ + G + + DK++E
Sbjct: 524 EVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKE 563
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/409 (22%), Positives = 174/409 (42%), Gaps = 48/409 (11%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAV---NVFNQVPYPNVHLYNSLIRA- 91
KQ+H LK LH +YVA +I+ + C ++A VF + + N+ +NS+I A
Sbjct: 177 KQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAF 236
Query: 92 HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTG--------PSSLPLVQM-IHA 142
N ++ F M +GV D T LL C+ P+ + + +H+
Sbjct: 237 QCCNLGKKAI--GVFMRMHSDGVGFDRAT---LLNICSSLYKSSDLVPNEVSKCCLQLHS 291
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE-RDAVTWNSMIGGLVRGGD 201
K G V +LI YS D +LF M RD V WN +I D
Sbjct: 292 LTVKSGLVTQTEVATALIKVYSEMLEDYTD-CYKLFMEMSHCRDIVAWNGIITAFAV-YD 349
Query: 202 LDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWS----T 253
+ A LF ++ + D +++++L A A + ++++ ++ + +
Sbjct: 350 PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
++ Y++ G +D+ +FD +++V W +++ Y+ G + ++ KM+ + PD
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPD 466
Query: 314 DGVLISILTACAESGMLGLGKKIHASV--------QRCRFRCSTKVLNAFIDMYAKCGCL 365
I++L+AC+ +G + G +I S+ Q + C IDM ++
Sbjct: 467 SATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYAC-------VIDMLSRAERF 519
Query: 366 DAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEP 414
A + +M D V W +++ HG +L + + E EP
Sbjct: 520 AEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLG-KLAADKLKELVEP 567
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 137/423 (32%), Positives = 218/423 (51%), Gaps = 20/423 (4%)
Query: 149 FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKL 208
Y ++ + + L+ +YS+ + ++ +F M R+ +WN +IG R G + L
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHL-FPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDL 120
Query: 209 FDEMPERDMVSWNTML----------DGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGY 258
F M V + AK+G++ L ++ S +V Y
Sbjct: 121 FLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCL-KLGFSSSLFVSSALVIMY 179
Query: 259 SRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLI 318
G + AR LFD P ++ VL+T + GY ++G ++ +M +G D V++
Sbjct: 180 VDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMV 239
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLN---AFIDMYAKCGCLDAAFGIFSKM 375
S+L AC + G L GK +H C RCS LN A DMY KC LD A +F M
Sbjct: 240 SLLMACGQLGALKHGKSVHG---WCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNM 296
Query: 376 TGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKG 435
+ ++D++SW+S+I G+G+ G + +LF M+ EG EP+ TF+G+L AC H GLV+K
Sbjct: 297 S-RRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 436 RNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACR 495
YF M++ Y IVP+++HY + D +SR G LEEA + L MPV+P+ V+G +L C+
Sbjct: 356 WLYFRLMQE-YNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCK 414
Query: 496 MHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGA 555
++ +VE+ ++ L +L P + L+ +Y+ AG + S+R MK K G
Sbjct: 415 VYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGC 474
Query: 556 SSI 558
SSI
Sbjct: 475 SSI 477
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 192/431 (44%), Gaps = 81/431 (18%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHI-SSAVNVFNQVPYPNVHL 84
LH N ++ +HA LL+ L+ ++ ++ KL+ A+S H+ ++++VF +PY N+
Sbjct: 41 LHHSPNAKHLRHLHAHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFS 100
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+N +I + +G S + F M RE V PD+FT P +L+AC+ +IH
Sbjct: 101 WNIIIGEFSRSG-FASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVL 159
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
K GF +FV ++L+ Y G + A +LF M RD+V + +M GG V+ G+
Sbjct: 160 CLKLGFSSSLFVSSALVIMYVDMG--KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAM 217
Query: 204 GAFKLFDEMPERD-------MVS-------------------W-------------NTML 224
+F EM MVS W N +
Sbjct: 218 LGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAIT 277
Query: 225 DGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKC----PEKNLV 280
D Y K ++ A +F M + ++ISWS+++ GY GD+ M+ LFD+ E N V
Sbjct: 278 DMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAV 337
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEE-------------------AGL----------- 310
+ ++S A G ++++ + + M+E AGL
Sbjct: 338 TFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDM 397
Query: 311 --KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAA 368
KPD+ V+ ++L+ C G + +G+++ + + + R ++ + +Y+ G D A
Sbjct: 398 PVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVT-LAGLYSAAGRFDEA 456
Query: 369 FGIFSKMTGKK 379
+ M K+
Sbjct: 457 ESLRQWMKEKQ 467
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 148/504 (29%), Positives = 240/504 (47%), Gaps = 49/504 (9%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
+LD+ KQ+H K L ++ V LI+A+ C + A +F ++ +N++I
Sbjct: 230 DLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
Query: 91 AHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY 150
A A +P F M G P+ TY +L + L + IH + K G
Sbjct: 290 ATA-KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCE 348
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDG--AFKL 208
I + N+LID Y++CG ++ + F + +++ V WN+++ G + DG L
Sbjct: 349 TGIVLGNALIDFYAKCGN--LEDSRLCFDYIRDKNIVCWNALLSGY---ANKDGPICLSL 403
Query: 209 FDEM------------------------------------PERDMVSWNTMLDGYAKAGE 232
F +M + D V ++++ YAK
Sbjct: 404 FLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYV-LSSLMRSYAKNQL 462
Query: 233 MNKAFELFDRMLQWNIISWSTMVCG-YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAE 291
MN A L D + +V G YSR G + L + + V W I+ +
Sbjct: 463 MNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSR 522
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCS-TK 350
+ +E L+ M ++ ++PD +SIL+ C++ L LG IH + + F C+ T
Sbjct: 523 SDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTF 582
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
V N IDMY KCG + + +F + T +K+L++W ++I G+HG G++ALE F +
Sbjct: 583 VCNVLIDMYGKCGSIRSVMKVFEE-TREKNLITWTALISCLGIHGYGQEALEKFKETLSL 641
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
GF+PD+ +FI +L AC H G+V +G F M K YG+ P+++HY C +DLL+R G+L+E
Sbjct: 642 GFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKE 700
Query: 471 AFELLRSMPVEPNAIVVGTLLGAC 494
A L+R MP +A V T L C
Sbjct: 701 AEHLIREMPFPADAPVWRTFLDGC 724
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 159/341 (46%), Gaps = 44/341 (12%)
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM------ 243
N++I + G++ A K+FD+MPER+ VS+NT++ GY+K G+++KA+ +F M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 244 ---------------------------LQWNII-----SWSTMVCGYSRAGDMDMARMLF 271
L++ + + ++C Y R ++MA +F
Sbjct: 113 PNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVF 172
Query: 272 DKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLG 331
+ P K+L W ++S +GF+KE + ++ G + + +L + L
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLD 232
Query: 332 LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGF 391
+ K++H S + C V+N+ I Y KCG A +F G D+VSWN++I
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQD-AGSWDIVSWNAIICAT 291
Query: 392 GVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQ 451
KAL+LF SM GF P++ T++ +L + L+ GR + K G
Sbjct: 292 AKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK-NGCETG 350
Query: 452 IEHYGCMIDLLSRGGHLEEA---FELLRSMPVEP-NAIVVG 488
I +ID ++ G+LE++ F+ +R + NA++ G
Sbjct: 351 IVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/525 (23%), Positives = 225/525 (42%), Gaps = 73/525 (13%)
Query: 26 LHRCSNLDLV--KQIHAQLLKAHLHQ-DLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L C++LD+ Q+H LK L D +V L+ + + A VF +P+ ++
Sbjct: 121 LLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSL 180
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFF--HMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
+N ++ +L G L FF + R G ++ +LK + L + + +
Sbjct: 181 ETWNHMM---SLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQL 237
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
H K G +I V NSLI +Y +CG + A R+F D V+WN++I +
Sbjct: 238 HCSATKKGLDCEISVVNSLISAYGKCGNTHM--AERMFQDAGSWDIVSWNAIICATAKSE 295
Query: 201 DLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWN-----IISW 251
+ A KLF MPE + ++ ++L G + ++ ML N I+
Sbjct: 296 NPLKALKLFVSMPEHGFSPNQGTYVSVL-GVSSLVQLLSCGRQIHGMLIKNGCETGIVLG 354
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
+ ++ Y++ G+++ +R+ FD +KN+V W ++SGYA K L+ +M + G +
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFR 413
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF-- 369
P + + L +C + + +++H+ + R + + VL++ + YAK ++ A
Sbjct: 414 PTEYTFSTALKSCCVTEL----QQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLL 469
Query: 370 -----------------GIFSK------------MTGKKDLVSWNSMIHGFGVHGQGEKA 400
GI+S+ + D VSWN I E+
Sbjct: 470 LDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEV 529
Query: 401 LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGC--- 457
+ELF M+ PDKYTF+ +L C+ + G + ++G++ + + + C
Sbjct: 530 IELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSS-------IHGLITKTD-FSCADT 581
Query: 458 -----MIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMH 497
+ID+ + G + ++ E N I L+ +H
Sbjct: 582 FVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIH 625
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 179/405 (44%), Gaps = 22/405 (5%)
Query: 35 VKQIHAQ--LLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAH 92
K +HA L + L Q +YV +I+ + +S A VF+Q+P N +N++I+ +
Sbjct: 31 TKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGY 90
Query: 93 ALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFG-FYE 151
+ G + F M+ G P+ T LL +C Q+ H K+G F
Sbjct: 91 SKYGDVDK-AWGVFSEMRYFGYLPNQSTVSGLL-SCASLDVRAGTQL-HGLSLKYGLFMA 147
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
D FV L+ Y R ++ A ++F M + TWN M+ L G L F E
Sbjct: 148 DAFVGTCLLCLYGRLD--LLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRE 205
Query: 212 MPERDMVSWNTMLDGYAKAGEMNKAFELFDRM--------LQWNIISWSTMVCGYSRAGD 263
+ + G K K ++ ++ L I ++++ Y + G+
Sbjct: 206 LVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGN 265
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
MA +F ++V W II A+ +A L+ M E G P+ G +S+L
Sbjct: 266 THMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVL--NAFIDMYAKCGCLDAAFGIFSKMTGKKDL 381
+ +L G++IH + + C T ++ NA ID YAKCG L+ + F + K++
Sbjct: 326 SSLVQLLSCGRQIHGML--IKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIR-DKNI 382
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCAC 426
V WN+++ G+ + G L LF M+ GF P +YTF L +C
Sbjct: 383 VCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 143/476 (30%), Positives = 237/476 (49%), Gaps = 24/476 (5%)
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE 183
LK C SS+ + IH + D F+ + L+ S + A L +
Sbjct: 19 FLKLC---SSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSD 75
Query: 184 RDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAK-----AGEMN 234
TWN + G + ++ EM R + +++ +L A AG
Sbjct: 76 STPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 235 KAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGF 294
+ E+ +++ + ++ Y AR +FD+ E+N+V W +I++ E G
Sbjct: 136 QV-EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGK 194
Query: 295 MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNA 354
+ + +M PD+ ++ +L+AC G L LGK +H+ V + ++ A
Sbjct: 195 LNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTA 252
Query: 355 FIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG-FE 413
+DMYAK G L+ A +F +M K ++ +W++MI G +G E+AL+LFS M+ E
Sbjct: 253 LVDMYAKSGGLEYARLVFERMVDK-NVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 414 PDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFE 473
P+ TF+G+LCAC+H GLVD G YF+ MEK++ I P + HYG M+D+L R G L EA++
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
Query: 474 LLRSMPVEPNAIVVGTLLGACRMHNDVE---LARALSEHLFKLVPSDPGNFSLLSNIYAQ 530
++ MP EP+A+V TLL AC +H+D + + + + L +L P GN +++N +A+
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAE 431
Query: 531 AGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSD--DIYQMI 584
A W A VR MK +K +G S + F F P+S+ IY+++
Sbjct: 432 ARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRF--FSGYDPRSEYVSIYELL 485
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 199/395 (50%), Gaps = 21/395 (5%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLI--AAFSLCRHISSAVNVFNQVPYP 80
L L CS++ + QIH Q+ + L D ++ +L+ ++ SL + ++ A +
Sbjct: 17 LIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 81 NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
+N L R ++ + S P + + M+R G+ P+ T+PFLLKAC L + I
Sbjct: 77 TPSTWNMLSRGYSSSDS-PVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQI 135
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
V K GF D++V N+LI Y C A ++F M ER+ V+WNS++ LV G
Sbjct: 136 QVEVLKHGFDFDVYVGNNLIHLYGTCKKTS--DARKVFDEMTERNVVSWNSIMTALVENG 193
Query: 201 DLDGAFKLFDEM-------PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWST 253
L+ F+ F EM E MV + G G++ + ++ R L+ N +
Sbjct: 194 KLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHS-QVMVRELELNCRLGTA 252
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDK-MEEAGLKP 312
+V Y+++G ++ AR++F++ +KN+ W+ +I G A+ GF +EA L+ K M+E+ ++P
Sbjct: 253 LVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRP 312
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRC-RFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
+ + +L AC+ +G++ G K +++ + + A +D+ + G L+ A+
Sbjct: 313 NYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDF 372
Query: 372 FSKMTGKKDLVSWNSMIHGFGVH------GQGEKA 400
KM + D V W +++ +H G GEK
Sbjct: 373 IKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKV 407
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 165/637 (25%), Positives = 278/637 (43%), Gaps = 109/637 (17%)
Query: 24 CTLHRCSNLD---LVKQIHAQLLKAHLHQDLYVA--PKLIAAFSLCRHISSAVNVFNQVP 78
C + CS+++ L + +H ++K+ + +V+ +I+ +S C +A VF ++
Sbjct: 294 CVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELV 353
Query: 79 YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQR-EGVYPDNFTYPFLLKACTGPSSLPLV 137
+V N+++ A NG F MQ + + PD T + C S
Sbjct: 354 CRDVISSNAILNGFAANGMFEE-AFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412
Query: 138 QMIHAHVEKFGFYEDIF-VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGG- 195
+ +H + + V NS+ID Y +CG A LF RD V+WNSMI
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDMYGKCGLT--TQAELLFKTTTHRDLVSWNSMISAF 470
Query: 196 ----------------------------------------------------LVRGGDLD 203
L + GDL
Sbjct: 471 SQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLT 530
Query: 204 GAFKLFDEMPE-RDMVSWNTMLDGYAKAG---EMNKAFELFDR--MLQWNIISW------ 251
AF + M E RD+ SWN+++ G A +G E +AF+ R ++ ++I+
Sbjct: 531 SAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISA 590
Query: 252 -----------------------------STMVCGYSRAGDMDMARMLFDKCPEKNLVLW 282
+T++ Y R D++ A +F + NL W
Sbjct: 591 SGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSW 650
Query: 283 TTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR 342
+IS ++ +E L+ ++ L+P++ + +L+A + G G + H + R
Sbjct: 651 NCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIR 707
Query: 343 CRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALE 402
F+ + V A +DMY+ CG L+ +F + +G + +WNS+I G HG GEKA+E
Sbjct: 708 RGFQANPFVSAALVDMYSSCGMLETGMKVF-RNSGVNSISAWNSVISAHGFHGMGEKAME 766
Query: 403 LFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDL 461
LF + EP+K +FI LL AC+H+G +D+G +Y+ ME+ +G+ P EH ++D+
Sbjct: 767 LFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDM 826
Query: 462 LSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNF 521
L R G L EA+E + + A V G LL AC H D +L + ++E LF++ P + +
Sbjct: 827 LGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYY 886
Query: 522 SLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
L+N Y G W +R +++ +K G S I
Sbjct: 887 ISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/406 (25%), Positives = 197/406 (48%), Gaps = 20/406 (4%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+ +H LK L QDL + KL+ + + S+ +F+++ +V ++NS+I A N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
G + + F M +G D+ T A + M+H + G D +
Sbjct: 167 GRYIA-AVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSL 225
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP-- 213
N+L++ Y++ G + A +F+ ME RD V+WN+++ + G + + F M
Sbjct: 226 CNALMNLYAK--GENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGS 283
Query: 214 --ERDMVSWNTMLDGYAKAGEMNKAFELFDRML------QWNIISWSTMVCGYSRAGDMD 265
E D V+++ ++ + E+ L ++ + ++ ++++ YS+ GD +
Sbjct: 284 GQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTE 343
Query: 266 MARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG-LKPDDGVLISILTAC 324
A +F++ ++++ I++G+A G +EA + ++M+ ++PD ++SI + C
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC 403
Query: 325 AESGMLGLGKKIHASVQRCRFRC-STKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
+ G+ +H R + + +V+N+ IDMY KCG A +F K T +DLVS
Sbjct: 404 GDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLF-KTTTHRDLVS 462
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKY---TFIGLLCAC 426
WNSMI F +G KA LF +V E + K+ T + +L +C
Sbjct: 463 WNSMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSC 507
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 169/389 (43%), Gaps = 19/389 (4%)
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRG 199
+H K G +D+ + L+ Y R G + LF ++E+D + WNSMI L +
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSC--LFDELKEKDVIVWNSMITALNQN 166
Query: 200 GDLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMV 255
G A LF EM E D + + K L ++ ++ S++
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 256 CG----YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
Y++ ++ A +F +++V W TI++ G +++ + M +G +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRF--RCSTKVLNAFIDMYAKCGCLDAAF 369
D +++AC+ L LG+ +H V + + V N+ I MY+KCG +AA
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 370 GIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH-EGFEPDKYTFIGLLCACTH 428
+F ++ +D++S N++++GF +G E+A + + M + +PD T + + C
Sbjct: 347 TVFEELVC-RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 429 AGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVG 488
+GR ++ +E +ID+ + G +A ELL + +
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-ELLFKTTTHRDLVSWN 464
Query: 489 TLLGACRMHNDVELARALSEHLFKLVPSD 517
+++ A + A+ +LFK V S+
Sbjct: 465 SMISAFSQNGFTHKAK----NLFKEVVSE 489
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 134/298 (44%), Gaps = 19/298 (6%)
Query: 208 LFDEMPERDMVSWNT------------MLDGYAKAGEMNKAFELFDRMLQWNIISWSTMV 255
LFDE+PER+ + + M+ + F L +LQ ++ + S ++
Sbjct: 71 LFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQ-DLATSSKLL 129
Query: 256 CGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDG 315
Y R G++ + LFD+ EK++++W ++I+ + G A L+ +M G + D
Sbjct: 130 TFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDST 189
Query: 316 VLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM 375
L+ +A + + +H + + NA +++YAK L +A +F+ M
Sbjct: 190 TLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHM 249
Query: 376 TGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKG 435
+D+VSWN+++ +G K+L+ F SM G E D TF ++ AC+ + G
Sbjct: 250 E-HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLG 308
Query: 436 RNYFNSMEKV-YGIVPQIEHYGCMIDLLSRGGHLEEA----FELLRSMPVEPNAIVVG 488
+ + K Y + +I + S+ G E A EL+ + NAI+ G
Sbjct: 309 ESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNG 366
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 224/459 (48%), Gaps = 66/459 (14%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
L CSN +KQIH +++K +L D + +LI+ S A VFNQ+ P+ +
Sbjct: 27 LRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTW 86
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
N +IR+ ++N H RE + L + M+ +H
Sbjct: 87 NLMIRSLSVN------------HKPREAL-------------------LLFILMMISHQS 115
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGA 205
+F + FV + + S S +RL G V G +
Sbjct: 116 QFDKFTFPFVIKACLASSS----------IRL----------------GTQVHGLAIKAG 149
Query: 206 FKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMD 265
F F+ D+ NT++D Y K G+ + ++FD+M +I+SW+TM+ G +D
Sbjct: 150 F--FN-----DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 266 MARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA 325
A ++F++ P +N+V WT +I+ Y + EA L+ +M+ +KP++ ++++L A
Sbjct: 203 SAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQAST 262
Query: 326 ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
+ G L +G+ +H + F + A IDMY+KCG L A +F M GK L +WN
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKS-LATWN 321
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
SMI GVHG GE+AL LF M E EPD TF+G+L AC + G V G YF M +
Sbjct: 322 SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Query: 445 VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPN 483
VYGI P EH CMI LL + +E+A L+ SM +P+
Sbjct: 382 VYGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD 420
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 216/471 (45%), Gaps = 69/471 (14%)
Query: 89 IRAHALNGSHPSLTFSTFFHMQREGVYP-DNFTYPFLLKACTGPSSLPLVQMIHAHVEKF 147
+ ++A G+H + F M P D + LK+C L +HAH K
Sbjct: 19 LSSYANQGNHEQ-ALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKS 77
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFK 207
F + FV +L+D Y +C V A K
Sbjct: 78 NFLSNPFVGCALLDMYGKCLSVS---------------------------------HARK 104
Query: 208 LFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMA 267
LFDE+P+R+ V WN M+ Y G++ +A EL++ M
Sbjct: 105 LFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM------------------------ 140
Query: 268 RMLFDKCPEKNLVLWTTIISGY--AEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACA 325
D P N + II G E G + A Y KM E KP+ L+++++AC+
Sbjct: 141 ----DVMP--NESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSACS 193
Query: 326 ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
G L K+IH+ R ++ + ++ Y +CG + +F M +D+V+W+
Sbjct: 194 AIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME-DRDVVAWS 252
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
S+I + +HG E AL+ F M PD F+ +L AC+HAGL D+ YF M+
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGD 312
Query: 446 YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARA 505
YG+ +HY C++D+LSR G EEA++++++MP +P A G LLGACR + ++ELA
Sbjct: 313 YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEI 372
Query: 506 LSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
+ L + P +P N+ LL IY G +RL+MK +G + G+S
Sbjct: 373 AARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 47/283 (16%)
Query: 38 IHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHA---- 93
+HA +K++ + +V L+ + C +S A +F+++P N ++N++I +
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 94 ------------------------------LNGSHPSLTFSTFFHMQREGVYPDNFTYPF 123
+GS+ ++ F + M P+ T
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEF--YRKMIEFRFKPNLITLLA 187
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE 183
L+ AC+ + L++ IH++ + + + L+++Y RCG + +F +ME+
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVY--VQLVFDSMED 245
Query: 184 RDAVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFEL 239
RD V W+S+I GD + A K F EM D +++ +L + AG ++A
Sbjct: 246 RDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVY 305
Query: 240 FDRM-----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK 277
F RM L+ + +S +V SR G + A + PEK
Sbjct: 306 FKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEK 348
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/334 (34%), Positives = 179/334 (53%), Gaps = 7/334 (2%)
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
AR +FD+ P+ ++V W +++GY G E ++ +M G++PD+ + + LTACA+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 327 SGMLGLGKKIHASVQRCRF-RCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
G L GK IH V++ R+ V A +DMYAKCGC++ A +F K+T ++++ SW
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLT-RRNVFSWA 289
Query: 386 SMIHGFGVHGQGEKALELFSSMVHE-GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
++I G+ +G +KA + E G +PD +G+L AC H G +++GR +ME
Sbjct: 290 ALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Query: 445 VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELAR 504
YGI P+ EHY C++DL+ R G L++A +L+ MP++P A V G LL CR H +VEL
Sbjct: 350 RYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGE 409
Query: 505 ALSEHLFKL----VPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXX 560
++L L V + LSNIY VR ++ G +K G S +
Sbjct: 410 LAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEV 469
Query: 561 XXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQV 594
F D SHP I+ +I L D Q+
Sbjct: 470 DGIVTKFVSGDVSHPNLLQIHTLIHLLSVDASQI 503
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 186/392 (47%), Gaps = 24/392 (6%)
Query: 27 HRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAF----SLCRHISSAVNVFNQVPYPNV 82
RC+ + +K H+ + LH++ Y KL+ AF +L +H A ++F+ + PN
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHM---QREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
+Y+++IR + S P L F M + E + P T+ FL+ AC + +
Sbjct: 79 FVYDTMIRICS-RSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 140 IHAHVEKFG-FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVR 198
IH V K G F D V ++ Y + A ++F + + D V W+ ++ G VR
Sbjct: 138 IHCWVVKNGVFLSDGHVQTGVLRIYVE--DKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 199 GGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKA-----FELFDRMLQWNII 249
G ++F EM R D S T L A+ G + + F R ++ ++
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVF 255
Query: 250 SWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME-EA 308
+ +V Y++ G ++ A +F+K +N+ W +I GYA G+ K+AT D++E E
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERED 315
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK--VLNAFIDMYAKCGCLD 366
G+KPD VL+ +L ACA G L G+ + +++ R+ + K + +D+ + G LD
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRTMLENME-ARYGITPKHEHYSCIVDLMCRAGRLD 374
Query: 367 AAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
A + KM K W ++++G H E
Sbjct: 375 DALDLIEKMPMKPLASVWGALLNGCRTHKNVE 406
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 198/372 (53%), Gaps = 14/372 (3%)
Query: 234 NKAFELFDRMLQWNIISWSTMVCGYS-------RAGDMDMARMLFDKCPEKNLVLWTTII 286
N+++ L R+L W +S S VC + + G+ +A+ + ++N++ W +I
Sbjct: 79 NRSY-LARRLLLW-FLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMI 136
Query: 287 SGYAEKGFMKEA-TVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRF 345
GY +EA L + + +KP+ S L ACA G L K +H+ +
Sbjct: 137 GGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGI 196
Query: 346 RCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFS 405
+ + +A +D+YAKCG + + +F + + D+ WN+MI GF HG +A+ +FS
Sbjct: 197 ELNAILSSALVDVYAKCGDIGTSREVFYSVK-RNDVSIWNAMITGFATHGLATEAIRVFS 255
Query: 406 SMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRG 465
M E PD TF+GLL C+H GL+++G+ YF M + + I P++EHYG M+DLL R
Sbjct: 256 EMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRA 315
Query: 466 GHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLS 525
G ++EA+EL+ SMP+EP+ ++ +LL + R + + EL ++L K + G++ LLS
Sbjct: 316 GRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSK---AKSGDYVLLS 372
Query: 526 NIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIG 585
NIY+ W + VR M G +K G S + F D SH ++ IY+++
Sbjct: 373 NIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLE 432
Query: 586 RLVHDLRQVGYV 597
L+ + G+V
Sbjct: 433 GLIQKTKSQGFV 444
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 137/309 (44%), Gaps = 47/309 (15%)
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGF--YEDIFVPNSLIDSYSRCG-------------- 167
+L++C PS+ V HA + K G+ Y + V S + +Y RC
Sbjct: 36 VLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLV--STVAAYRRCNRSYLARRLLLWFLS 93
Query: 168 ----------------GVGIDG-AMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
+G G A ++ +++ +TWN MIGG VR + A K
Sbjct: 94 LSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALK 153
Query: 211 EM-----PERDMVSWNTMLDGYAKAGEMNKA----FELFDRMLQWNIISWSTMVCGYSRA 261
M + + S+ + L A+ G+++ A + D ++ N I S +V Y++
Sbjct: 154 NMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKC 213
Query: 262 GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL 321
GD+ +R +F ++ +W +I+G+A G EA ++ +ME + PD + +L
Sbjct: 214 GDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL 273
Query: 322 TACAESGMLGLGKKIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKK 379
T C+ G+L GK+ + R RF K+ A +D+ + G + A+ + M +
Sbjct: 274 TTCSHCGLLEEGKEYFGLMSR-RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP 332
Query: 380 DLVSWNSMI 388
D+V W S++
Sbjct: 333 DVVIWRSLL 341
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 100/228 (43%), Gaps = 12/228 (5%)
Query: 70 AVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACT 129
A V NV +N +I + N + + + + P+ F++ L AC
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 130 GPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTW 189
L + +H+ + G + + ++L+D Y++CG +G + +F +++ D W
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGT--SREVFYSVKRNDVSIW 234
Query: 190 NSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM-- 243
N+MI G G A ++F EM D +++ +L + G + + E F M
Sbjct: 235 NAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
Query: 244 ---LQWNIISWSTMVCGYSRAGDMDMARMLFDKCP-EKNLVLWTTIIS 287
+Q + + MV RAG + A L + P E ++V+W +++S
Sbjct: 295 RFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 219/409 (53%), Gaps = 14/409 (3%)
Query: 155 VPNSLIDSYSRCGGVGIDGAM--RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
V N+LI SY G A+ + ++ + + +T+ S+I + L +
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 213 PERDMVSWNTMLDG-----YAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMA 267
+R + W+ + Y + G++ + ++FD +L +++ ++++ R G+MD A
Sbjct: 113 LKRGFL-WDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 268 RMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM---EEAGLKPDDGVLISILTAC 324
F + P ++V WTT+I+G+++KG +A +++ +M E A + P++ +S+L++C
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 325 A--ESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLV 382
A + G + LGK+IH V +T + A +DMY K G L+ A IF ++ KK +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKK-VC 290
Query: 383 SWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSM 442
+WN++I +G+ ++ALE+F M P+ T + +L AC + LVD G F+S+
Sbjct: 291 AWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
Query: 443 EKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVEL 502
Y I+P EHYGC++DL+ R G L +A ++S+P EP+A V+G LLGAC++H + EL
Sbjct: 351 CSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTEL 410
Query: 503 ARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQK 551
+ + L L P G + LS A +W +R M AG +K
Sbjct: 411 GNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 162/360 (45%), Gaps = 48/360 (13%)
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+YN+LIR++ G + + + + F HM V P+N T+P L+KA S+ +H
Sbjct: 53 VYNTLIRSYLTTGEYKT-SLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQ 111
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLD 203
K GF D FV S + Y G ++ + ++F + V NS++ R G++D
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGD--LESSRKMFDDILNPCVVACNSLLDACGRNGEMD 169
Query: 204 GAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ------------------ 245
AF+ F MP D+VSW T+++G++K G KA +F M+Q
Sbjct: 170 YAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLS 229
Query: 246 ------WNIISWSTMVCGY--------------------SRAGDMDMARMLFDKCPEKNL 279
I + GY +AGD++MA +FD+ +K +
Sbjct: 230 SCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKV 289
Query: 280 VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHAS 339
W IIS A G K+A +++ M+ + + P+ L++ILTACA S ++ LG ++ +S
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSS 349
Query: 340 V-QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
+ + +++ +D+ + G L A + + D +++ +H E
Sbjct: 350 ICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTE 409
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 179/334 (53%), Gaps = 7/334 (2%)
Query: 267 ARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
AR +FD+ P+ ++V W +++GY G E ++ +M GL+PD+ + + LTACA+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 327 SGMLGLGKKIHASVQRCRF-RCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWN 385
G L GK IH V++ + V A +DMYAKCGC++ A +F K+T ++++ SW
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT-RRNVFSWA 289
Query: 386 SMIHGFGVHGQGEKALELFSSMVHE-GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
++I G+ +G +KA+ + E G +PD +G+L AC H G +++GR+ +ME
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 445 VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELAR 504
Y I P+ EHY C++DL+ R G L++A L+ MP++P A V G LL CR H +VEL
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGE 409
Query: 505 ALSEHLFKL----VPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXX 560
++L L V + LSNIY + VR ++ G +K G S +
Sbjct: 410 LAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEV 469
Query: 561 XXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQV 594
F D SHP I+ +I L D Q+
Sbjct: 470 DGNVTKFVSGDVSHPNLLQIHTVIHLLSVDALQI 503
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 185/392 (47%), Gaps = 24/392 (6%)
Query: 27 HRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAF----SLCRHISSAVNVFNQVPYPNV 82
RC+ + +K H+ + LH++ Y KL+ AF +L +H A ++F+ + PN
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHM---QREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
+Y+++IR + S P L F M + E + P T+ FL+ AC + +
Sbjct: 79 FVYDTMIRICS-RSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQ 137
Query: 140 IHAHVEKFG-FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVR 198
IH V K G F D V ++ Y + +D A ++F + + D V W+ ++ G VR
Sbjct: 138 IHCWVVKNGVFLSDSHVQTGVLRIYVE-DKLLLD-ARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 199 GGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEM--NKAFELFDRMLQW---NII 249
G ++F EM E D S T L A+ G + K F + W ++
Sbjct: 196 CGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF 255
Query: 250 SWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME-EA 308
+ +V Y++ G ++ A +F K +N+ W +I GYA G+ K+A +++E E
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERED 315
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK--VLNAFIDMYAKCGCLD 366
G+KPD VL+ +L ACA G L G+ + +++ R+ + K + +D+ + G LD
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRSMLENME-ARYEITPKHEHYSCIVDLMCRAGRLD 374
Query: 367 AAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGE 398
A + KM K W ++++G H E
Sbjct: 375 DALNLIEKMPMKPLASVWGALLNGCRTHKNVE 406
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 183/310 (59%), Gaps = 17/310 (5%)
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYA---EKGF--MKEATVLYDKME 306
+T++ Y++ GD+ AR +FD+ PE+ V W +I GY +KG ++A VL+ +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 307 --EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL--NAFIDMYAKC 362
+G++P D ++ +L+A +++G+L +G +H +++ F V A +DMY+KC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 363 GCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGL 422
GCL+ AF +F M K++ +W SM G ++G+G + L + M G +P++ TF L
Sbjct: 271 GCLNNAFSVFELMK-VKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSL 329
Query: 423 LCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEP 482
L A H GLV++G F SM+ +G+ P IEHYGC++DLL + G ++EA++ + +MP++P
Sbjct: 330 LSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKP 389
Query: 483 NAIVVGTLLGACRMHNDVELARALSEHLF-------KLVPSDPGNFSLLSNIYAQAGDWM 535
+AI++ +L AC ++ + + + + L KL S+ ++ LSN+ A G W+
Sbjct: 390 DAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWV 449
Query: 536 NVASVRLQMK 545
V +R +MK
Sbjct: 450 EVEKLRKEMK 459
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 184/446 (41%), Gaps = 105/446 (23%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVN-------VFNQVPYPNVHLYNSL 88
KQIHAQL+ H D + KLI + C S+ + VF + +P+ L+N+L
Sbjct: 25 KQIHAQLVINGCH-DNSLFGKLIGHY--CSKPSTESSSKLAHLLVFPRFGHPDKFLFNTL 81
Query: 89 IRAHALNGSHPSLTFSTF--FHMQREGVYPDNFTYPFLL---KACTGPSSLPLVQMIHAH 143
++ S P + F + + +Y + T+ F+L S+L + +++H
Sbjct: 82 LKC-----SKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGM 136
Query: 144 VEKFGF-YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
V+K GF YE + +L+ Y++ GDL
Sbjct: 137 VKKLGFLYESELIGTTLLHFYAK---------------------------------NGDL 163
Query: 203 DGAFKLFDEMPERDMVSWNTMLDGYAK---AGEMN--KAFELFDR--------------- 242
A K+FDEMPER V+WN M+ GY G N KA LF R
Sbjct: 164 RYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTM 223
Query: 243 ------MLQWNIISWSTMVCG----------------------YSRAGDMDMARMLFDKC 274
+ Q ++ ++V G YS+ G ++ A +F+
Sbjct: 224 VCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELM 283
Query: 275 PEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGK 334
KN+ WT++ +G A G E L ++M E+G+KP++ S+L+A G++ G
Sbjct: 284 KVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGI 343
Query: 335 KIHASVQRCRFRCSTKV--LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFG 392
++ S+ + RF + + +D+ K G + A+ M K D + S+ +
Sbjct: 344 ELFKSM-KTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACS 402
Query: 393 VHGQGEKALELFSSMVHEGFEPDKYT 418
++G+ E+ +++ E +K +
Sbjct: 403 IYGETVMGEEIGKALLEIEREDEKLS 428
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 105/225 (46%), Gaps = 15/225 (6%)
Query: 32 LDLVKQIHAQLLK-AHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
L + + +H + K L++ + L+ ++ + A VF+++P +N++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 91 ---AHALNGSH---PSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
+H G+H ++ F GV P + T +L A + L + ++H ++
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 145 EKFGFYE--DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDL 202
EK GF D+F+ +L+D YS+CG ++ A +F M+ ++ TW SM GL G
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCG--CLNNAFSVFELMKVKNVFTWTSMATGLALNGRG 304
Query: 203 DGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRM 243
+ L + M E + +++ ++L Y G + + ELF M
Sbjct: 305 NETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSM 349
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/478 (31%), Positives = 242/478 (50%), Gaps = 31/478 (6%)
Query: 98 HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPN 157
+P+ T + F + R + T+ +L AC+ S + +HA + K G
Sbjct: 64 NPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKT 123
Query: 158 SLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM-PERD 216
+LID YS+ G + +D ++R+F ++EE+D V+WN+++ G +R G A +F M ER
Sbjct: 124 ALIDMYSKYGHL-VD-SVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERV 181
Query: 217 MVSWNTM---------LDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMA 267
+S T+ L + +++ + R L ++ + M+ YS G ++ A
Sbjct: 182 EISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL---VVLGTAMISFYSSVGLINEA 238
Query: 268 RMLFDKCP-EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
+++ + V+ ++ISG KEA +L + +P+ VL S L C++
Sbjct: 239 MKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSD 293
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS 386
+ L +GK+IH R F +K+ N +DMY KCG + A IF + K +VSW S
Sbjct: 294 NSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIF-RAIPSKSVVSWTS 352
Query: 387 MIHGFGVHGQGEKALELFSSMVHEG--FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
MI + V+G G KALE+F M EG P+ TF+ ++ AC HAGLV +G+ F M++
Sbjct: 353 MIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKE 412
Query: 445 VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE-----PNAIVVGTLLGACRMHND 499
Y +VP EHY C ID+LS+ G EE + L+ M P AI V +L AC ++ D
Sbjct: 413 KYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVA-VLSACSLNMD 471
Query: 500 VELARALSEHLFKLV-PSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGAS 556
+ ++ L + P + + L+SN YA G W V +R ++KN G K +G S
Sbjct: 472 LTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 163/349 (46%), Gaps = 15/349 (4%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
+Q+HA ++K LI +S H+ +V VF V ++ +N+L+ N
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRN 163
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
G F M RE V FT ++K C L + +HA V G + + +
Sbjct: 164 GKGKE-ALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG-RDLVVL 221
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAME-ERDAVTWNSMIGGLVRGGDLDGAFKLFD-EMP 213
++I YS G I+ AM++++++ D V NS+I G +R + AF L + P
Sbjct: 222 GTAMISFYSSVG--LINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRP 279
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCG----YSRAGDMDMARM 269
++S + L G + ++ ++ L+ +S S + G Y + G + AR
Sbjct: 280 NVRVLS--SSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQART 337
Query: 270 LFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKM--EEAGLKPDDGVLISILTACAES 327
+F P K++V WT++I YA G +A ++ +M E +G+ P+ + +++ACA +
Sbjct: 338 IFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHA 397
Query: 328 GMLGLGKKIHASV-QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM 375
G++ GK+ + ++ R T+ FID+ +K G + + + +M
Sbjct: 398 GLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM 446
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 219/436 (50%), Gaps = 20/436 (4%)
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE 183
LL+ C ++ +H + + ++ + + L+ Y+ CG + A +F M +
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEV--AHEVFDRMSK 155
Query: 184 RDA--VTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAG--EMNK 235
RD+ WNS+I G G + A L+ +M E D ++ +L G ++ +
Sbjct: 156 RDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGE 215
Query: 236 AF--ELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKG 293
A +L +++ + +V Y++ GD+ AR +FD P K+ V W ++++GY G
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 294 FMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLN 353
+ EA ++ M + G++PD + S+L G+++H V R V N
Sbjct: 276 LLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWVIRRGMEWELSVAN 332
Query: 354 AFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFE 413
A I +Y+K G L A IF +M ++D VSWN++I H + L+ F M +
Sbjct: 333 ALIVLYSKRGQLGQACFIFDQML-ERDTVSWNAII---SAHSKNSNGLKYFEQMHRANAK 388
Query: 414 PDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFE 473
PD TF+ +L C + G+V+ G F+ M K YGI P++EHY CM++L R G +EEA+
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 474 LL-RSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAG 532
++ + M +E V G LL AC +H + ++ ++ LF+L P + NF LL IY++A
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 533 DWMNVASVRLQMKNAG 548
+V VR M + G
Sbjct: 509 RAEDVERVRQMMVDRG 524
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 220/471 (46%), Gaps = 59/471 (12%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNV 82
L T + +D ++H + L +L ++ KL+ ++ C + A VF+++ +
Sbjct: 99 LETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDS 158
Query: 83 H--LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
+NSLI +A G + + +F M +GV PD FT+P +LKAC G S+ + + I
Sbjct: 159 SPFAWNSLISGYAELGQYED-AMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAI 217
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGG 200
H + K GF D++V N+L+ Y++CG I A +F + +D V+WNSM+ G + G
Sbjct: 218 HRDLVKEGFGYDVYVLNALVVMYAKCG--DIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 201 DLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFEL----FDRMLQWNIISWS 252
L A +F M E D V+ +++L A+ +L R ++W + +
Sbjct: 276 LLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVAN 332
Query: 253 TMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKP 312
++ YS+ G + A +FD+ E++ V W IIS +++ +++M A KP
Sbjct: 333 ALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANAKP 389
Query: 313 DDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIF 372
D +S+L+ CA +GM+ G+++ + + +GI
Sbjct: 390 DGITFVSVLSLCANTGMVEDGERLFS-------------------------LMSKEYGID 424
Query: 373 SKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE-GFEPDKYTFIGLLCACTHAGL 431
KM + M++ +G G E+A +S +V E G E + LL AC G
Sbjct: 425 PKME------HYACMVNLYGRAGMMEEA---YSMIVQEMGLEAGPTVWGALLYACYLHGN 475
Query: 432 VDKGRNYFNSMEKVYGIVPQIEH-YGCMIDLLSRGGHLEEAFELLRSMPVE 481
D G + ++++ + P EH + +I + S+ E+ E +R M V+
Sbjct: 476 TDIGE---VAAQRLFELEPDNEHNFELLIRIYSKAKRAEDV-ERVRQMMVD 522
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 36/212 (16%)
Query: 316 VLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM 375
+ S+L C + G ++H + R + + + + +YA CG + A +F +M
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 376 TGKKDL--VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCAC------- 426
+ K+D +WNS+I G+ GQ E A+ L+ M +G +PD++TF +L AC
Sbjct: 154 S-KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQ 212
Query: 427 ----THAGLVDKGRNY----FNSM-------------EKVYGIVPQIEH--YGCMIDLLS 463
H LV +G Y N++ V+ ++P ++ + M+
Sbjct: 213 IGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL 272
Query: 464 RGGHLEEAFELLRSMP---VEPNAIVVGTLLG 492
G L EA ++ R M +EP+ + + ++L
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISSVLA 304
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 166/631 (26%), Positives = 286/631 (45%), Gaps = 97/631 (15%)
Query: 12 WFSPRRL--LEEKLCTL----HRCSNLDLV-KQIHAQLLKAHLHQDLYVAPKLIAAFSLC 64
WFS R+ E TL H C +L ++IH ++++ V ++ ++
Sbjct: 114 WFSKLRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADS 173
Query: 65 RHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREG-VYPDNFTYPF 123
+S A +F+++ +V ++ +IR++ + P + F M E PD T
Sbjct: 174 DSLS-ARKLFDEMSERDVISWSVVIRSY-VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTS 231
Query: 124 LLKACTGPSSLPLVQMIHAHVEKFGF-YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
+LKACT + + + +H + GF D+FV NSLID YS+
Sbjct: 232 VLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSK----------------- 274
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDR 242
G D+D AF++FDE R++VSWN++L G+ ++A E+F
Sbjct: 275 ----------------GFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHL 318
Query: 243 MLQW---------------------------------------NIISWSTMVCGYSRAGD 263
M+Q N ++ S+++ Y+
Sbjct: 319 MVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSL 378
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+D A + D K++V +T+ISG A G EA ++ M + P+ +IS+L A
Sbjct: 379 VDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNA 435
Query: 324 CAESGMLGLGKKIHA-SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLV 382
C+ S L K H +++R V + +D YAKCG ++ A F ++T +K+++
Sbjct: 436 CSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQIT-EKNII 494
Query: 383 SWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSM 442
SW +I + ++G +KAL LF M +G+ P+ T++ L AC H GLV KG F SM
Sbjct: 495 SWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM 554
Query: 443 -EKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP--VEPNAIVVGTLLGACRMH-N 498
E+ + P ++HY C++D+LSR G ++ A EL++++P V+ A G +L CR
Sbjct: 555 VEEDHK--PSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFK 612
Query: 499 DVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
+ + + + +L P + L S+ +A W +VA +R +K + +G S +
Sbjct: 613 KLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Query: 559 XXXXXXXXFTVFD---HSHPKSDDIYQMIGR 586
F D S + +D+ Q + R
Sbjct: 673 REGNLAKRFLAGDKLSQSDSELNDVVQSLHR 703
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 135/286 (47%), Gaps = 25/286 (8%)
Query: 220 WNTMLDGYAKAGEMNKAFELFDRMLQWNII-------SW----STMVCGYSRAGDMDMAR 268
W ++ GY+ E+ +A F+ + I+ SW +++ Y + GD+
Sbjct: 25 WREVVSGYS---EIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGL 81
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG 328
FD ++ V W I+ G + GF +E + K+ G +P+ L+ ++ AC
Sbjct: 82 REFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC--RS 139
Query: 329 MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMI 388
+ G+KIH V R F + V N+ + MYA L +A +F +M+ ++D++SW+ +I
Sbjct: 140 LWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMS-ERDVISWSVVI 197
Query: 389 HGFGVHGQGEKALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRNYFN-SMEKVY 446
+ + L+LF MVHE EPD T +L ACT +D GR+ S+ + +
Sbjct: 198 RSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGF 257
Query: 447 GIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP----VEPNAIVVG 488
+ + +ID+ S+G ++ AF + V N+I+ G
Sbjct: 258 DL-ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAG 302
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 180/328 (54%), Gaps = 4/328 (1%)
Query: 221 NTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
N+++ Y G ++ A +LF + + +I+SW++++ G R GD+ A LFD+ P+KN++
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
W +IS Y + L+ +M AG + ++ L+ +L AC S L G+ +HAS+
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 341 QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKA 400
R S + A IDMY KC + A IF ++ ++ V+WN MI +HG+ E
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLS-IRNKVTWNVMILAHCLHGRPEGG 335
Query: 401 LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMID 460
LELF +M++ PD+ TF+G+LC C AGLV +G++Y++ M + I P H CM +
Sbjct: 336 LELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMAN 395
Query: 461 LLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSD 517
L S G EEA E L+++P V P + LL + R + L ++++ L + P +
Sbjct: 396 LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLN 455
Query: 518 PGNFSLLSNIYAQAGDWMNVASVRLQMK 545
+ LL NIY+ G W +V VR +K
Sbjct: 456 YKYYHLLMNIYSVTGRWEDVNRVREMVK 483
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 159/341 (46%), Gaps = 44/341 (12%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q+HA+L+ + D A +L+ + S S V+++ + ++ N + +A+ L
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIG--KLYCANPVFKAY-LVS 96
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
S P +F + R G PD++T+ L+ + +M H K G + + V
Sbjct: 97 SSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQ 156
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERD 216
NSL+ Y+ CG +D A +LF + +RD V+WNS+I G+VR GD+ A KLFDEMP+++
Sbjct: 157 NSLMHMYTCCGA--LDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN 214
Query: 217 MVSWNTMLDGYAKAGEMNKAFELFDRMLQWNII-SWSTMV-----CG------------- 257
++SWN M+ Y A + LF M++ + ST+V CG
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHA 274
Query: 258 --------------------YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKE 297
Y + ++ +AR +FD +N V W +I + G +
Sbjct: 275 SLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEG 334
Query: 298 ATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA 338
L++ M L+PD+ + +L CA +G++ G+ ++
Sbjct: 335 GLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYS 375
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 143/317 (45%), Gaps = 39/317 (12%)
Query: 29 CSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSL 88
C LDL K++ ++ K +D+ +IA + +A +F+++P N+ +N +
Sbjct: 166 CGALDLAKKLFVEIPK----RDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIM 221
Query: 89 IRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFG 148
I A+ L ++P ++ S F M R G + T LL AC + L + +HA + +
Sbjct: 222 ISAY-LGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF 280
Query: 149 FYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKL 208
+ + +LID Y +C VG+ A R+F ++ R+ VTWN MI G +G +L
Sbjct: 281 LNSSVVIDTALIDMYGKCKEVGL--ARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLEL 338
Query: 209 FDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMAR 268
F+ M + ML+ + +++ ++CG +RAG + +
Sbjct: 339 FEAM---------------------------INGMLRPDEVTFVGVLCGCARAGLVSQGQ 371
Query: 269 ----MLFDKCPEK-NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
++ D+ K N + + Y+ GF +EA + + + P+ ++L++
Sbjct: 372 SYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSS 431
Query: 324 CAESGMLGLGKKIHASV 340
+G LG+ I S+
Sbjct: 432 SRFTGNPTLGESIAKSL 448
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 110/279 (39%), Gaps = 53/279 (18%)
Query: 212 MPERDMVSWNTMLDGYAKAGEMNKAFELFD---RMLQ----WNIISWST-MVCGYSRAGD 263
+ R +V +L G+ + N LF R++ W+ SW+ ++ SR GD
Sbjct: 11 VTSRFIVPGTGLLKGFKLVEDSNSITHLFQVHARLITSGNFWDS-SWAIRLLKSSSRFGD 69
Query: 264 MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL-- 321
++ + L + Y K+A Y + G PD +S++
Sbjct: 70 SSYTVSIYRSIGK--LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISC 127
Query: 322 ---TACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
T C +SG + G+ I + V N+ + MY CG LD A +F ++ K
Sbjct: 128 IEKTCCVDSGKMCHGQAIKHGCDQV-----LPVQNSLMHMYTCCGALDLAKKLFVEIP-K 181
Query: 379 KDLVSWNSMIHGFGVHGQGEKA-------------------------------LELFSSM 407
+D+VSWNS+I G +G A + LF M
Sbjct: 182 RDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM 241
Query: 408 VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
V GF+ ++ T + LL AC + + +GR+ S+ + +
Sbjct: 242 VRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF 280
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/510 (27%), Positives = 248/510 (48%), Gaps = 78/510 (15%)
Query: 35 VKQIHAQLLKAH-LHQDLYVAPKLIAAFSLCRHISSAVN-VFNQVPYPNVHLYNSLIRAH 92
+ QIHAQL+ + L + Y A ++I+ + R S +F+ V +PNV + NS+ +
Sbjct: 22 LNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYF 81
Query: 93 A-LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYE 151
+ ++ ++ L + R G+ PD F++P ++K S+ + A VEK GF++
Sbjct: 82 SKMDMANDVLRL--YEQRSRCGIMPDAFSFPVVIK-----SAGRFGILFQALVEKLGFFK 134
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
D +V N ++D Y V+ ++ A K+FD+
Sbjct: 135 DPYVRNVIMDMY---------------------------------VKHESVESARKVFDQ 161
Query: 212 MPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLF 271
+ +R WN M+ GY K G +A +LFD M + +++SW+ M+ G+++ D++ AR F
Sbjct: 162 ISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYF 221
Query: 272 DKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLG 331
D+ PEK++V W ++SGYA+ GF ++A L++ M G++P++ + +++AC+
Sbjct: 222 DRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 332 LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGF 391
L + + + R R + V A +DM+AKC + +A IF+++ +++LV+WN+MI G+
Sbjct: 282 LTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGY 341
Query: 392 GV-------------------------------HGQGEKALELFSSMVHEG-FEPDKYTF 419
+GQ A+E F M+ G +PD+ T
Sbjct: 342 TRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTM 401
Query: 420 IGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP 479
I +L AC H ++ G + + K I Y +I + +RGG+L EA + M
Sbjct: 402 ISVLSACGHMADLELGDCIVDYIRK-NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK 460
Query: 480 VEPNAIVVGTLLGACRMHND-VELARALSE 508
E + + TL A + D VE LS+
Sbjct: 461 -ERDVVSYNTLFTAFAANGDGVETLNLLSK 489
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 171/347 (49%), Gaps = 44/347 (12%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
K+ +L D+ +I F+ + + +A F+++P +V +N+++ +A N
Sbjct: 183 KEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQN 242
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
G F M R GV P+ T+ ++ AC+ + L + + +++ + FV
Sbjct: 243 GFTED-ALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFV 301
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAM-EERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
+L+D +++C I A R+F+ + +R+ VTWN+MI G R GD+ A +LFD MP+
Sbjct: 302 KTALLDMHAKCRD--IQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 215 RDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW---------------------------- 246
R++VSWN+++ GYA G+ A E F+ M+ +
Sbjct: 360 RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDC 419
Query: 247 ------------NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGF 294
N + +++ Y+R G++ A+ +FD+ E+++V + T+ + +A G
Sbjct: 420 IVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGD 479
Query: 295 MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ 341
E L KM++ G++PD S+LTAC +G+L G++I S++
Sbjct: 480 GVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 12/229 (5%)
Query: 18 LLEEKLCTLH-RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQ 76
++ L +H +C ++ ++I +L ++L +I+ ++ +SSA +F+
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDT 356
Query: 77 VPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREG-VYPDNFTYPFLLKACTGPSSLP 135
+P NV +NSLI +A NG +L F M G PD T +L AC + L
Sbjct: 357 MPKRNVVSWNSLIAGYAHNG-QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Query: 136 LVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGG 195
L I ++ K + SLI Y+R G + A R+F M+ERD V++N++
Sbjct: 416 LGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW--EAKRVFDEMKERDVVSYNTLFTA 473
Query: 196 LVRGGD----LDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELF 240
GD L+ K+ DE E D V++ ++L +AG + + +F
Sbjct: 474 FAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/505 (27%), Positives = 256/505 (50%), Gaps = 22/505 (4%)
Query: 66 HISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFL- 124
++++A+++F+++P +V +N++I G H FF MQR + P FT+ L
Sbjct: 85 YLNNALDLFDEMPERDVVSWNTMISGLVSCGFHE-YGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 125 -LKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE 183
L C I + V ++ ++ V NS++D Y R G D A+ +F ME+
Sbjct: 144 SLVTCVRHGEQIHGNAICSGVSRY----NLVVWNSVMDMYRRLGV--FDYALSVFLTMED 197
Query: 184 RDAVTWNSMIGGLVRGGDLDGA---FKLFDEMP-ERDMVSWNTMLDGYAKAGEMNKAFEL 239
RD V+WN +I G+ + A F L EM + D + + ++ + E++K +
Sbjct: 198 RDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 240 FDRMLQWNIISWSTMVCG-----YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGF 294
++ +S +++V G +S+ +D + LF + + + VL ++I Y+
Sbjct: 258 LALCIKMGFLS-NSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCC 316
Query: 295 MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNA 354
++A L+ ++PD S+L++ + ML G +H+ V + F T V +
Sbjct: 317 GEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGFDLDTAVATS 375
Query: 355 FIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMV-HEGFE 413
++MY K G +D A G+F+K GK DL+ WN++I G + + ++L +F+ ++ ++ +
Sbjct: 376 LMEMYFKTGSVDLAMGVFAKTDGK-DLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 414 PDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFE 473
PD+ T +G+L AC +AG V++G F+SMEK +G+ P EHY C+I+LL R G + EA +
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKD 494
Query: 474 LLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGD 533
+ +P EP++ + +L A D LA +++ + + P + +L IY
Sbjct: 495 IADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWR 554
Query: 534 WMNVASVRLQMKNAGGQKPSGASSI 558
W N +R M + G+S I
Sbjct: 555 WENSVKLRYAMNEHKLKSAQGSSKI 579
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 41/359 (11%)
Query: 116 PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM 175
P + + L+ S L +++HA + + GF + N + Y + G V A+
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVI--NAL 59
Query: 176 RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNK 235
+LF + +++ +TWN + GL + G L+ A LFDEMPERD+VSWNTM+ G G
Sbjct: 60 QLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEY 119
Query: 236 AFELFDRMLQW-------------------------------------NIISWSTMVCGY 258
+F M +W N++ W++++ Y
Sbjct: 120 GIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMY 179
Query: 259 SRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLI 318
R G D A +F ++++V W +I ++ G + A + M E ++PD+ +
Sbjct: 180 RRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVS 239
Query: 319 SILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK 378
+++ C++ L GK+ A + F ++ VL A IDM++KC LD + +F ++ K
Sbjct: 240 MVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-K 298
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN 437
D V NSMI + H GE AL LF + + PDK+TF +L + +A ++D G +
Sbjct: 299 WDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL-SSMNAVMLDHGAD 356
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 29/303 (9%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
KQ A +K + V I FS C + +V +F ++ + L NS+I +++ +
Sbjct: 255 KQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH 314
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM-----IHAHVEKFGFY 150
F + V PD FT+ +L SS+ V + +H+ V K GF
Sbjct: 315 CCGED-ALRLFILAMTQSVRPDKFTFSSVL------SSMNAVMLDHGADVHSLVIKLGFD 367
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFD 210
D V SL++ Y + G V D AM +F+ + +D + WN++I GL R + +F+
Sbjct: 368 LDTAVATSLMEMYFKTGSV--DLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 425
Query: 211 EM-------PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS-----WSTMVCGY 258
++ P+R V+ +L AG +N+ ++F M + + ++ ++ ++
Sbjct: 426 QLLMNQSLKPDR--VTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELL 483
Query: 259 SRAGDMDMARMLFDKCP-EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
R G ++ A+ + DK P E + +W I+ + G + A + M E+ K L
Sbjct: 484 CRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYL 543
Query: 318 ISI 320
+ I
Sbjct: 544 VLI 546
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/435 (30%), Positives = 217/435 (49%), Gaps = 23/435 (5%)
Query: 3 VSAGVRIPTWFSPRRLLEEKLCTLHRCS---NLDLVKQIHAQLLKAHLHQDLYVAPKLIA 59
V G+R F+ R+ +C L+ CS +L +Q+H ++K + +L V L+
Sbjct: 175 VKHGIR----FTNERMF---VCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVY 226
Query: 60 AFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNF 119
++ C ++SA+ F+ + +V + ++I A + G H F M P+ F
Sbjct: 227 FYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKG-HGIKAIGMFIGMLNHWFLPNEF 285
Query: 120 TYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFS 179
T +LKAC+ +L + +H+ V K D+FV SL+D Y++CG I ++F
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGE--ISDCRKVFD 343
Query: 180 AMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWN----TMLDGYAKAGEMNK 235
M R+ VTW S+I R G + A LF M R +++ N ++L G +
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 236 AFELFDRML----QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAE 291
EL +++ + N+ ST+V Y + G+ A + + P +++V WT +ISG +
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
G EA +M + G++P+ S L ACA S L +G+ IH+ ++ + V
Sbjct: 464 LGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV 523
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
+A I MYAKCG + AF +F M +K+LVSW +MI G+ +G +AL+L M EG
Sbjct: 524 GSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG 582
Query: 412 FEPDKYTFIGLLCAC 426
FE D Y F +L C
Sbjct: 583 FEVDDYIFATILSTC 597
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 135/532 (25%), Positives = 253/532 (47%), Gaps = 25/532 (4%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLY 85
L + + L+K+IHA LK Q +Y LI++ + A VF+ +P N +
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTW 151
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGV-YPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
++I + G F+ F + G+ + + + LL C+ + L + +H ++
Sbjct: 152 TAMIDGYLKYGLEDE-AFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNM 210
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDG 204
K G ++ V +SL+ Y++CG + A+R F MEE+D ++W ++I R G
Sbjct: 211 VKVGV-GNLIVESSLVYFYAQCGE--LTSALRAFDMMEEKDVISWTAVISACSRKGHGIK 267
Query: 205 AFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFE--------LFDRMLQWNIISWSTMVC 256
A +F M + + KA KA + RM++ ++ ++++
Sbjct: 268 AIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMD 327
Query: 257 GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
Y++ G++ R +FD +N V WT+II+ +A +GF +EA L+ M+ L ++
Sbjct: 328 MYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLT 387
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
++SIL AC G L LGK++HA + + + + + + +Y KCG AF + ++
Sbjct: 388 VVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP 447
Query: 377 GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
+D+VSW +MI G G +AL+ M+ EG EP+ +T+ L AC ++ + GR
Sbjct: 448 S-RDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGR 506
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP----VEPNAIVVGTLL- 491
+ +S+ K + + +I + ++ G + EAF + SMP V A+++G
Sbjct: 507 S-IHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARN 565
Query: 492 GACR-----MHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVA 538
G CR M+ + +++F + S G+ L + + A ++ +
Sbjct: 566 GFCREALKLMYRMEAEGFEVDDYIFATILSTCGDIELDEAVESSATCYLETS 617
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 197/432 (45%), Gaps = 44/432 (10%)
Query: 116 PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM 175
+ Y L + + + L++ IHA K + I+ N+LI S R G + A
Sbjct: 80 SERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVY--AR 137
Query: 176 RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWN-----TMLDGYAKA 230
++F +M E++ VTW +MI G ++ G D AF LF++ + + N +L+ ++
Sbjct: 138 KVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRR 197
Query: 231 GEMNKAFELFDRMLQW---NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIIS 287
E ++ M++ N+I S++V Y++ G++ A FD EK+++ WT +IS
Sbjct: 198 AEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVIS 257
Query: 288 GYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRC 347
+ KG +A ++ M P++ + SIL AC+E L G+++H+ V + +
Sbjct: 258 ACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKT 317
Query: 348 STKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSM 407
V + +DMYAKCG + +F M+ ++ V+W S+I G GE+A+ LF M
Sbjct: 318 DVFVGTSLMDMYAKCGEISDCRKVFDGMSN-RNTVTWTSIIAAHAREGFGEEAISLFRIM 376
Query: 408 VHEGFEPDKYTFIGLLCACTHAGLVDKGRNYF-----NSMEK------------------ 444
+ T + +L AC G + G+ NS+EK
Sbjct: 377 KRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGES 436
Query: 445 --VYGIVPQ-----IEHYGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIVVGTLLGAC 494
+ ++ Q + + MI S GH EA + L+ M VEPN + L AC
Sbjct: 437 RDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKAC 496
Query: 495 RMHNDVELARAL 506
+ + R++
Sbjct: 497 ANSESLLIGRSI 508
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 153/358 (42%), Gaps = 80/358 (22%)
Query: 12 WFSPRRLLEEKLCT-LHRCSN---LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHI 67
WF P E +C+ L CS L +Q+H+ ++K + D++V L+ ++ C I
Sbjct: 279 WFLPN---EFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEI 335
Query: 68 SSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKA 127
S VF+ + N + S+I AHA G S F M+R + +N T +L+A
Sbjct: 336 SDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE-AISLFRIMKRRHLIANNLTVVSILRA 394
Query: 128 CTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAV 187
C +L L + +HA + K +++++ ++L+ Y +CG E RDA
Sbjct: 395 CGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCG--------------ESRDA- 439
Query: 188 TWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW- 246
F + ++P RD+VSW M+ G + G ++A + M+Q
Sbjct: 440 ------------------FNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG 481
Query: 247 --------------------------------------NIISWSTMVCGYSRAGDMDMAR 268
N+ S ++ Y++ G + A
Sbjct: 482 VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAF 541
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
+FD PEKNLV W +I GYA GF +EA L +ME G + DD + +IL+ C +
Sbjct: 542 RVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGD 599
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 215/447 (48%), Gaps = 12/447 (2%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
+ HA +K L +++ L+ + C + A VF+++ ++ ++ ++I A N
Sbjct: 235 KTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNK 294
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY-EDIFV 155
+ E +YP++ +L +L L + +HAHV K Y E FV
Sbjct: 295 RQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV 354
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
+ LID Y +CG + R+F ++R+A++W +++ G G D A + M +
Sbjct: 355 HSGLIDLYCKCGDMA--SGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 216 ----DMVSWNTMLDGYAKAGEMNKAFEL----FDRMLQWNIISWSTMVCGYSRAGDMDMA 267
D+V+ T+L A+ + + E+ + N+ ++++ YS+ G +
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYP 472
Query: 268 RMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAES 327
LFD+ ++N+ WT +I Y E ++ ++ M + +PD + +LT C++
Sbjct: 473 IRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDL 532
Query: 328 GMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSM 387
L LGK++H + + F V I MY KCG L +A F + K L +W ++
Sbjct: 533 KALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSL-TWTAI 591
Query: 388 IHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYG 447
I +G + A+ F MV GF P+ +TF +L C+ AG VD+ +FN M ++Y
Sbjct: 592 IEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYN 651
Query: 448 IVPQIEHYGCMIDLLSRGGHLEEAFEL 474
+ P EHY +I+LL+R G +EEA L
Sbjct: 652 LQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 210/448 (46%), Gaps = 17/448 (3%)
Query: 36 KQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALN 95
KQ+H + L + ++ KL+ ++ C + A VF++ NV+ +N+L+R ++
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 96 GSHP-SLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIF 154
G STF M+ GV + ++ + K+ G S+L HA K G + +F
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 250
Query: 155 VPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
+ SL+D Y +CG VG+ A R+F + ERD V W +MI GL A LF M
Sbjct: 251 LKTSLVDMYFKCGKVGL--ARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMIS 308
Query: 215 RDMVSWNTML-------DGYAKAGEMNK---AFELFDRMLQWNIISWSTMVCGYSRAGDM 264
+ + N+++ G KA ++ K A L + S ++ Y + GDM
Sbjct: 309 EEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDM 368
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
R +F ++N + WT ++SGYA G +A M++ G +PD + ++L C
Sbjct: 369 ASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVC 428
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSW 384
AE + GK+IH + F + ++ + + MY+KCG + +F ++ ++++ +W
Sbjct: 429 AELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLE-QRNVKAW 487
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN-YFNSME 443
+MI + + +E+F M+ PD T +L C+ + G+ + + ++
Sbjct: 488 TAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILK 547
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
K + +P + +I + + G L A
Sbjct: 548 KEFESIPFVS--ARIIKMYGKCGDLRSA 573
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 212/472 (44%), Gaps = 49/472 (10%)
Query: 108 HMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCG 167
++++ G+ + T+ LL+AC SL + +H H+ G + F+ L+ Y+ CG
Sbjct: 101 YLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACG 160
Query: 168 GVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGD--LDGAFKLFDEMPE----RDMVSWN 221
V A ++F + +WN+++ G V G F EM E ++ S +
Sbjct: 161 SV--KDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLS 218
Query: 222 TMLDGYAKAGEMNKAFELFDRMLQWNIIS----WSTMVCGYSRAGDMDMARMLFDKCPEK 277
+ +A A + + + ++ + + +++V Y + G + +AR +FD+ E+
Sbjct: 219 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER 278
Query: 278 NLVLWTTIISGYAEKGFMKEATVLYDKM-EEAGLKPDDGVLISILTACAESGMLGLGKKI 336
++V+W +I+G A EA L+ M E + P+ +L +IL + L LGK++
Sbjct: 279 DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 337 HASVQRCRFRCSTKVLNA-FIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHG 395
HA V + + +++ ID+Y KCG + + +F + +++ +SW +++ G+ +G
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG-SKQRNAISWTALMSGYAANG 397
Query: 396 QGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKG--------RNYF-------N 440
+ ++AL M EGF PD T +L C + +G +N F
Sbjct: 398 RFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVT 457
Query: 441 SMEKVYGI--VPQ-------------IEHYGCMIDLLSRGGHLEEAFELLRSMPV---EP 482
S+ +Y VP+ ++ + MID L E+ R M + P
Sbjct: 458 SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRP 517
Query: 483 NAIVVGTLLGACRMHNDVELARALSEHLFKL-VPSDPGNFSLLSNIYAQAGD 533
+++ +G +L C ++L + L H+ K S P + + +Y + GD
Sbjct: 518 DSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGD 569
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 118/286 (41%), Gaps = 39/286 (13%)
Query: 286 ISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRF 345
I +A + ++ A + D +E+ G+ + ++L AC L GK++H ++
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 346 RCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQG--EKALEL 403
+ + + MY CG + A +F + T ++ SWN+++ G + G+ + L
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTS-SNVYSWNALLRGTVISGKKRYQDVLST 201
Query: 404 FSSMVHEGFEPDKYTFIGLLCACTHAGLVDKG---------RNYFNSM------------ 442
F+ M G + + Y+ + + A + +G FNS+
Sbjct: 202 FTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFK 261
Query: 443 -------EKVYGIVPQ--IEHYGCMIDLLSRGGHLEEAFELLRSMPVE----PNAIVVGT 489
+V+ + + I +G MI L+ EA L R+M E PN++++ T
Sbjct: 262 CGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTT 321
Query: 490 LLGACRMHNDVELARALSEHLFKL--VPSDPGNFSLLSNIYAQAGD 533
+L ++L + + H+ K P S L ++Y + GD
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGD 367
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/561 (23%), Positives = 246/561 (43%), Gaps = 84/561 (14%)
Query: 37 QIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNG 96
Q+H +++ +++V L+ ++ R + A+ +F+++ N+ + N L+R G
Sbjct: 133 QVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG 192
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGF-YEDIFV 155
L F + M+ EGV + TY ++++ C+ + + +H+ V K G+ +IFV
Sbjct: 193 ESKRL-FEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFV 251
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
N L+D YS CG DL G+ + F+ +PE+
Sbjct: 252 ANVLVDYYSACG---------------------------------DLSGSMRSFNAVPEK 278
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW-------------NIIS------------ 250
D++SWN+++ A G + + +LF +M W N S
Sbjct: 279 DVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIH 338
Query: 251 ---------------WSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFM 295
S ++ Y + ++ + +L+ P NL ++++ G
Sbjct: 339 CYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGIT 398
Query: 296 KEATVLYDKMEEAGLKPDDGVLISILTACAES--GMLGLGKKIHASVQRCRFRCSTKVLN 353
K+ ++ M + G D+ L ++L A + S L +H + + V
Sbjct: 399 KDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSC 458
Query: 354 AFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFE 413
+ ID Y K G + + +F ++ ++ S+I+G+ +G G +++ M
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDEL-DTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLI 517
Query: 414 PDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFE 473
PD+ T + +L C+H+GLV++G F+S+E YGI P + Y CM+DLL R G +E+A
Sbjct: 518 PDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAER 577
Query: 474 LLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGD 533
LL + + + +LL +CR+H + + R +E L L P + + +S Y + GD
Sbjct: 578 LLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGD 637
Query: 534 W------MNVASVRLQMKNAG 548
+ +A+ R M+ G
Sbjct: 638 FEISRQIREIAASRELMREIG 658
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 153/336 (45%), Gaps = 12/336 (3%)
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
++ N ID + G + A F M RD VT+N +I G R G A +L+ EM
Sbjct: 46 VYTHNRRIDELIKSGN--LLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEM 103
Query: 213 PE---RDMVS-WNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDM 264
R+ S + ++L + + ++ R++ N+ S +V Y+ +
Sbjct: 104 VSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLV 163
Query: 265 DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
D+A LFD+ ++NL + ++ + + G K +Y +ME G+ + ++ C
Sbjct: 164 DVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGC 223
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTK-VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
+ ++ GK++H+ V + + S V N +D Y+ CG L + F+ + +KD++S
Sbjct: 224 SHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVIS 282
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
WNS++ +G +L+LFS M G P F+ L C+ + G+ +
Sbjct: 283 WNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVL 342
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP 479
K+ V + +ID+ + +E + L +S+P
Sbjct: 343 KMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 260 RAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
++G++ A FD+ +++V + +ISG + G A LY +M GL+ S
Sbjct: 58 KSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPS 117
Query: 320 ILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK 379
+L+ C++ G ++H V F C+ V +A + +YA +D A +F +M +
Sbjct: 118 VLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEML-DR 176
Query: 380 DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYF 439
+L N ++ F G+ ++ E++ M EG + T+ ++ C+H LV +G+
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 440 NSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHND 499
+ + K + I ++D S G L + ++P E + I +++ C +
Sbjct: 237 SLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVCADYGS 295
Query: 500 V 500
V
Sbjct: 296 V 296
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/541 (23%), Positives = 239/541 (44%), Gaps = 59/541 (10%)
Query: 7 VRIPTWFSPRRL--LEEKLCTLHRCSNLDLVK--QIHAQLLKAHLHQDLY---VAPKLIA 59
++ W +P + L K TLH + L K QI A+ + A D Y V L
Sbjct: 66 LKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQE 125
Query: 60 AFSLCRHISSA----VNVFNQVPY-----------------PNVHLYNSLIRAHALNGSH 98
+ LC SS V ++++ P V YN+++ A + +
Sbjct: 126 TYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN 185
Query: 99 PSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNS 158
S + F M V P+ FTY L++ ++ + + +E G ++ N+
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 159 LIDSYSRCGGVGIDGAMRLFSAME----ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
LID Y C ID +L +M E + +++N +I GL R G + + EM
Sbjct: 246 LIDGY--CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 215 R----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDM 266
R D V++NT++ GY K G ++A + ML+ ++I++++++ +AG+M+
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 267 ARMLFDK------CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISI 320
A D+ CP N +TT++ G+++KG+M EA + +M + G P ++
Sbjct: 364 AMEFLDQMRVRGLCP--NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 321 LTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK-- 378
+ +G + + ++ + + + + +D A + +M K
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI 481
Query: 379 -KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN 437
D ++++S+I GF + ++A +L+ M+ G PD++T+ L+ A G ++K
Sbjct: 482 KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQ 541
Query: 438 YFNSM-EKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE---PNAIVVGTLLGA 493
N M EK G++P + Y +I+ L++ EA LL + E P+ + TL+
Sbjct: 542 LHNEMVEK--GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 494 C 494
C
Sbjct: 600 C 600
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 124/572 (21%), Positives = 237/572 (41%), Gaps = 115/572 (20%)
Query: 25 TLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP----YP 80
T+ N+ + + ++L++ + +++ LI F +I A+ +F+++ P
Sbjct: 179 TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLP 238
Query: 81 NVHLYNSLI----------------RAHALNGSHPSL-TFSTFFH--------------- 108
NV YN+LI R+ AL G P+L +++ +
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 109 --MQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRC 166
M R G D TY L+K + ++HA + + G + SLI +S C
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLI--HSMC 356
Query: 167 GGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMV 218
++ AM M R + T+ +++ G + G ++ A+++ EM + +V
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 219 SWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMA----RML 270
++N +++G+ G+M A + + M L +++S+ST++ G+ R+ D+D A R +
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 271 FDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA------- 323
+K + + + ++++I G+ E+ KEA LY++M GL PD+ +++ A
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 324 ---------CAESGML-----------GLGKK------------------------IHAS 339
E G+L GL K+ H
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Query: 340 VQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQ 396
++ C K + + I + G + A +F M GK D ++N MIHG G
Sbjct: 597 IENCS-NIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 397 GEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYG 456
KA L+ MV GF T I L+ A G V++ + + + + + E
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL-SEAEQAK 714
Query: 457 CMIDLLSRGGHLEEAFELLRSMPVE---PNAI 485
++++ R G+++ ++L M + PN I
Sbjct: 715 VLVEINHREGNMDVVLDVLAEMAKDGFLPNGI 746
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 209/498 (41%), Gaps = 71/498 (14%)
Query: 79 YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS----SL 134
Y + + A L+ + SL F + + Y + + ++K+ + S +L
Sbjct: 96 YKTAQILAEDVAAKTLDDEYASLVFKSL-QETYDLCYSTSSVFDLVVKSYSRLSLIDKAL 154
Query: 135 PLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWN 190
+V + AH GF + N+++D+ R I A +F M E + T+N
Sbjct: 155 SIVHLAQAH----GFMPGVLSYNAVLDATIR-SKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 191 SMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM--- 243
+I G G++D A LFD+M + ++V++NT++DGY K +++ F+L M
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 244 -LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEA 298
L+ N+IS++ ++ G R G M + + + + V + T+I GY ++G +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 299 TVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRC-STKVLNAFID 357
V++ +M GL P S++ + ++G + + + R R C + + +D
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLVD 388
Query: 358 MYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEP 414
+++ G ++ A+ + +M +V++N++I+G V G+ E A+ + M +G P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 415 DKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFEL 474
D + Y ++ R ++EA +
Sbjct: 449 D------------------------------------VVSYSTVLSGFCRSYDVDEALRV 472
Query: 475 LRSMP---VEPNAIVVGTLL-GACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQ 530
R M ++P+ I +L+ G C E E L +P D ++ L N Y
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 531 AGDWMNVASVRLQMKNAG 548
GD + +M G
Sbjct: 533 EGDLEKALQLHNEMVEKG 550
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 27/312 (8%)
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
+G +EA + D +E G D L+ + C + L + +H + C
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNS-----MIHGFGVHGQGEKALELFSS 406
NA I+MY+ C +D A +F +M WNS M+ F +G GE+A++LF+
Sbjct: 157 RNAIIEMYSGCCSVDDALKVFEEMP------EWNSGTLCVMMRCFVNNGYGEEAIDLFTR 210
Query: 407 MVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGG 466
EG +P+ F + CT G V +G F +M + YGIVP +EHY + +L+ G
Sbjct: 211 FKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSG 270
Query: 467 HLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSN 526
HL+EA + MP+EP+ V TL+ R+H DVEL +E + KL + S
Sbjct: 271 HLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATRLDKVSSAGL 330
Query: 527 IYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGR 586
+ +A D++ ++PS S F D SHP+ + IY+ +
Sbjct: 331 VATKASDFVK-------------KEPSTRSE---PYFYSTFRPVDSSHPQMNIIYETLMS 374
Query: 587 LVHDLRQVGYVP 598
L L+++GYVP
Sbjct: 375 LRSQLKEMGYVP 386
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
YS +D A +F++ PE N ++ + G+ +EA L+ + +E G KP+ +
Sbjct: 164 YSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIF 223
Query: 318 ISILTACAESGMLGLGK-KIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
+ + C +G + G + A + S + ++ M A G LD A +M
Sbjct: 224 NQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMP 283
Query: 377 GKKDLVSWNSMIHGFGVHGQ---GEKALELFSSMVHEGFEPDKYTFIGLL 423
+ + W ++++ VHG G++ EL + + DK + GL+
Sbjct: 284 MEPSVDVWETLMNLSRVHGDVELGDRCAELVEKL--DATRLDKVSSAGLV 331
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/531 (24%), Positives = 233/531 (43%), Gaps = 74/531 (13%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQV----PYPNVH 83
R S L L + +++K D+ L+ + + IS AV + +Q+ PN
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+N+LI L+ + S + M G PD FTY ++ + L +
Sbjct: 187 TFNTLIHGLFLH-NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRG 199
+EK D+ + ++ID+ C ++ A+ LF+ M+ + + VT+NS+I L
Sbjct: 246 MEKGKIEADVVIYTTIIDAL--CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 200 GDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISW 251
G A +L +M ER ++V+++ ++D + K G++ +A +L+D M++ +I ++
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
S+++ G+ +D A+ +F+ K N+V + T+I G+ + ++E L+ +M +
Sbjct: 364 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDA 367
GL + T N I + G D
Sbjct: 424 RGLVGN-----------------------------------TVTYNTLIQGLFQAGDCDM 448
Query: 368 AFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
A IF KM D+++++ ++ G +G+ EKAL +F + EPD YT+ ++
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 425 ACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE--- 481
AG V+ G + F S+ + G+ P + Y MI R G EEA L R M +
Sbjct: 509 GMCKAGKVEDGWDLFCSLS-LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 482 PNAIVVGTLLGACRMHNDVELARALSEHLFKLVPS-----DPGNFSLLSNI 527
PN+ TL+ A D +A S L K + S D S++ N+
Sbjct: 568 PNSGTYNTLIRARLRDGD----KAASAELIKEMRSCGFVGDASTISMVINM 614
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 131/552 (23%), Positives = 238/552 (43%), Gaps = 80/552 (14%)
Query: 66 HISSAVNVFNQV----PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTY 121
+ AV++F ++ P P++ +N L+ A A + L S MQ + D ++Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIA-KMNKFDLVISLGERMQNLRISYDLYSY 118
Query: 122 PFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAM 181
L+ S LPL + + K G+ DI +SL++ Y C G I A+ L M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGY--CHGKRISEAVALVDQM 176
Query: 182 ----EERDAVTWNSMI-----------------------------------GGLVRGGDL 202
+ + VT+N++I GL + GD+
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 203 DGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTM 254
D A L +M E D+V + T++D +N A LF M ++ N+++++++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 255 V---CGYSRAGDMDMARMLFDKCPEK---NLVLWTTIISGYAEKGFMKEATVLYDKMEEA 308
+ C Y R D +R+L D K N+V ++ +I + ++G + EA LYD+M +
Sbjct: 297 IRCLCNYGRWS--DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAA 368
+ PD S++ L K + + + N I + K ++
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 369 FGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA 425
+F +M+ + + V++N++I G G + A ++F MV +G PD T+ LL
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 426 CTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEP 482
G ++K F ++K + P I Y MI+ + + G +E+ ++L S+ V+P
Sbjct: 475 LCKYGKLEKALVVFEYLQK-SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Query: 483 NAIVVGTLL-GACRMHNDVELARALSEHLFKLVPSD-----PGNFSLLSNIYAQAGDWMN 536
N I+ T++ G CR E ++ LF+ + D G ++ L + GD
Sbjct: 534 NVIIYTTMISGFCRKGLKEE-----ADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588
Query: 537 VASVRLQMKNAG 548
A + +M++ G
Sbjct: 589 SAELIKEMRSCG 600
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 205/481 (42%), Gaps = 50/481 (10%)
Query: 17 RLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQ 76
+L + TL R + + K+I +Y LI+A+ A++VFN
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNS 293
Query: 77 VP----YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS 132
+ PN+ YN++I A G F MQR GV PD T+ LL C+
Sbjct: 294 MKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVT 188
+ + + +D+F N+L+D+ C G +D A + + M + + V+
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAI--CKGGQMDLAFEILAQMPVKRIMPNVVS 411
Query: 189 WNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRM- 243
++++I G + G D A LF EM D VS+NT+L Y K G +A ++ M
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471
Query: 244 ---LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMK 296
++ ++++++ ++ GY + G D + +F + + NL+ ++T+I GY++ G K
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 297 EATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFI 356
EA ++ + + AGL+ D + +++ A ++G++G + + + + N+ I
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Query: 357 DMYAKCGCLD--------AAFGIFSKMTGKKDLVSWNSMIHGFGV--------------H 394
D + + +D + S N +I FG
Sbjct: 592 DAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEE 651
Query: 395 GQGEKA--LELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME----KVYGI 448
G E + LE+F M +P+ TF +L AC+ + + KVYG+
Sbjct: 652 GMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFDNKVYGV 711
Query: 449 V 449
V
Sbjct: 712 V 712
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 169/369 (45%), Gaps = 61/369 (16%)
Query: 148 GFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGG-DL 202
G+ ++ ++LI +Y R G + A+ +F++M+E + VT+N++I +GG +
Sbjct: 263 GYGNTVYAFSALISAYGRSGL--HEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEF 320
Query: 203 DGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTM 254
K FDEM D +++N++L ++ G A LFD M ++ ++ S++T+
Sbjct: 321 KQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTL 380
Query: 255 VCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
+ + G MD+A + + P K N+V ++T+I G+A+ G EA L+ +M G+
Sbjct: 381 LDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
D R S N + +Y K G + A
Sbjct: 441 ALD--------------------------------RVS---YNTLLSIYTKVGRSEEALD 465
Query: 371 IFSKMTG---KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
I +M KKD+V++N+++ G+G G+ ++ ++F+ M E P+ T+ L+ +
Sbjct: 466 ILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Query: 428 HAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE---PNA 484
GL + F K G+ + Y +ID L + G + A L+ M E PN
Sbjct: 526 KGGLYKEAMEIFREF-KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 485 IVVGTLLGA 493
+ +++ A
Sbjct: 585 VTYNSIIDA 593
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 128/286 (44%), Gaps = 16/286 (5%)
Query: 221 NTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPE 276
+ M+ + G++ A +F+ + ++S ++ Y R+G + A +F+ E
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 277 ----KNLVLWTTIISGYAEKGF-MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLG 331
NLV + +I + G K+ +D+M+ G++PD S+L C+ G+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 332 LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMI 388
+ + + R N +D K G +D AF I ++M K+ ++VS++++I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGI 448
GF G+ ++AL LF M + G D+ ++ LL T G ++ + M V GI
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV-GI 475
Query: 449 VPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE---PNAIVVGTLL 491
+ Y ++ + G +E ++ M E PN + TL+
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 45/257 (17%)
Query: 339 SVQRCRFRCST-KVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVH 394
+V+R R + K+ +A I + G + A IF + +++++I +G
Sbjct: 222 AVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRS 281
Query: 395 GQGEKALELFSS------------------------------------MVHEGFEPDKYT 418
G E+A+ +F+S M G +PD+ T
Sbjct: 282 GLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRIT 341
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
F LL C+ GL + RN F+ M I + Y ++D + +GG ++ AFE+L M
Sbjct: 342 FNSLLAVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 479 PVE---PNAIVVGTLL-GACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDW 534
PV+ PN + T++ G + E E + + D +++ L +IY + G
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 535 MNVASVRLQMKNAGGQK 551
+ +M + G +K
Sbjct: 461 EEALDILREMASVGIKK 477
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 131/535 (24%), Positives = 227/535 (42%), Gaps = 106/535 (19%)
Query: 57 LIAAFSLCRHISSAVNVFNQVP----YPNVHLYNSLIRAHALNGSH-PSLTFSTFFHMQR 111
LI + R I A+++F ++ +P V Y LI++ L GS S + M+
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKS--LCGSERKSEALNLVKEMEE 351
Query: 112 EGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV-- 169
G+ P+ TY L+ + + + + + G ++ N+LI+ Y + G +
Sbjct: 352 TGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIED 411
Query: 170 ------------------------------GIDGAMRLFSAMEER----DAVTWNSMIGG 195
+ AM + + M ER D VT+NS+I G
Sbjct: 412 AVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 196 LVRGGDLDGAFKLFDEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDRMLQW----N 247
R G+ D A++L M +R +V ++ +M+D K+ + +A +LFD + Q N
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPN 531
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISGYAEKGFMKEATVLYD 303
++ ++ ++ GY +AG +D A ++ +K KN + + +I G G +KEAT+L +
Sbjct: 532 VVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Query: 304 KMEEAGLKPD---DGVLISILTACAE--------SGMLGLGKKIHASVQRCRFRCSTKVL 352
KM + GL+P D +LI L + ML G K A
Sbjct: 592 KMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHT-----------Y 640
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
FI Y + G L A + +KM DL +++S+I G+G GQ A ++ M
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700
Query: 410 EGFEPDKYTFIGL------------------LCACTHAGLVDKGRNYFNSMEKVYGIVPQ 451
G EP ++TF+ L LCA ++ D M + + + P
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE-HSVTPN 759
Query: 452 IEHYGCMIDLLSRGGHL---EEAFE-LLRSMPVEPNAIVVGTLLGAC---RMHND 499
+ Y +I + G+L E+ F+ + R+ + P+ +V LL C + HN+
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNE 814
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 202/425 (47%), Gaps = 26/425 (6%)
Query: 152 DIFVPNSLIDSYSRCGGV--GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLF 209
+I+ N +++ Y + G V ++ A + D T+ S+I G + DLD AFK+F
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 210 DEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQ----WNIISWSTMV---CGY 258
+EMP R+ V++ ++ G A +++A +LF +M + +++ ++ CG
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 259 SRAGD-MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
R + +++ + + + + N+ +T +I + ++A L +M E GL P+
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 318 ISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG 377
+++ + GM+ + ++ + +T+ N I Y K + A G+ +KM
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLE 455
Query: 378 KK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDK 434
+K D+V++NS+I G G + A L S M G PD++T+ ++ + + V++
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 435 GRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE---PNAIVVGTLL 491
+ F+S+E+ G+ P + Y +ID + G ++EA +L M + PN++ L+
Sbjct: 516 ACDLFDSLEQ-KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 492 GACRMHNDVELARALSEHLFK--LVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGG 549
++ A L E + K L P+ + L+ + + GD+ + S R Q + G
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL-KDGDFDHAYS-RFQQMLSSG 632
Query: 550 QKPSG 554
KP
Sbjct: 633 TKPDA 637
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 204/487 (41%), Gaps = 66/487 (13%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIR 90
N++ Q +++++A L D + LI + + + SA VFN++P N +
Sbjct: 233 NVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCR-RNEVAY 291
Query: 91 AHALNG----SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEK 146
H ++G F M+ + +P TY L+K+ G + +E+
Sbjct: 292 THLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEE 351
Query: 147 FGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDL 202
G +I LIDS C + A L M E+ + +T+N++I G + G +
Sbjct: 352 TGIKPNIHTYTVLIDSL--CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 203 DGAFKLFDEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTM 254
+ A + + M R + ++N ++ GY K+ ++KA + ++ML+ ++++++++
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
+ G R+G+ D A L ++ LV +T++I + ++EA L+D +E+ G+
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFG 370
P+ + A ID Y K G +D A
Sbjct: 529 NPN-----------------------------------VVMYTALIDGYCKAGKVDEAHL 553
Query: 371 IFSKMTGKKDL---VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACT 427
+ KM K L +++N++IHG G+ ++A L MV G +P T L+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLL 613
Query: 428 HAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNA 484
G D + F M G P Y I R G L +A +++ M V P+
Sbjct: 614 KDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDL 672
Query: 485 IVVGTLL 491
+L+
Sbjct: 673 FTYSSLI 679
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/456 (21%), Positives = 180/456 (39%), Gaps = 80/456 (17%)
Query: 66 HISSAVNVFNQV----PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTY 121
++ A+ V N++ P+V YNSLI +G+ S + M G+ PD +TY
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS-AYRLLSLMNDRGLVPDQWTY 500
Query: 122 PFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAM 181
++ + + + +E+ G ++ + +LID Y + G V D A + M
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV--DEAHLMLEKM 558
Query: 182 EERD----AVTWNSMIGGLVRGGDLDGAFKLFDEMPE---RDMVSWNTML-DGYAKAGEM 233
++ ++T+N++I GL G L A L ++M + + VS +T+L K G+
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDF 618
Query: 234 NKAFELFDRML----QWNIISWSTMVCGYSRAGDM----DMARMLFDKCPEKNLVLWTTI 285
+ A+ F +ML + + +++T + Y R G + DM + + +L ++++
Sbjct: 619 DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSL 678
Query: 286 ISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILT----------------ACA---- 325
I GY + G A + +M + G +P +S++ CA
Sbjct: 679 IKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNM 738
Query: 326 ---------------------------------ESGMLGLGKKIHASVQRCR-FRCSTKV 351
E G L + +K+ +QR S V
Sbjct: 739 MEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV 798
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMV 408
NA + K + A + M L S +I G G+ E+ +F +++
Sbjct: 799 FNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Query: 409 HEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
G+ D+ + ++ GLV+ FN MEK
Sbjct: 859 QCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 44/270 (16%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKAC----------- 128
P+ H Y + I+ + G M+ GV PD FTY L+K
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDAE-DMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 129 -------TG--PSSLPLVQMIHAHVE-KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLF 178
TG PS + +I +E K+G + S + + + D + L
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQK-----GSEPELCAMSNMMEFDTVVELL 748
Query: 179 SAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVS-----WNTMLDGYAK 229
M E +A ++ +I G+ G+L A K+FD M + +S +N +L K
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCK 808
Query: 230 AGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPE----KNLVL 281
+ N+A ++ D M+ + S ++CG + G+ + +F + ++ +
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
W II G ++G ++ L++ ME+ G K
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 157/334 (47%), Gaps = 16/334 (4%)
Query: 268 RMLFDKCPEKNLVLWTTII----SGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
R L + L +T I+ + + G +K+A D + D L+ +
Sbjct: 204 RALVNNLEANYLKYYTDIMIEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKI 263
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVS 383
C E+ L K +H + + ++MY+ CG + A +F KM+ +K+L +
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMS-EKNLET 322
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
W +I F +G GE A+++FS EG PD F G+ AC G VD+G +F SM
Sbjct: 323 WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMS 382
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
+ YGI P IE Y ++++ + G L+EA E + MP+EPN V TL+ R+H ++EL
Sbjct: 383 RDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELG 442
Query: 504 RALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSIXXXXX 563
+E + L P+ S I +A D + S++ + G K S
Sbjct: 443 DYCAEVVEFLDPTRLNKQSREGFIPVKASD-VEKESLKKRSGILHGVKSS---------- 491
Query: 564 XXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYV 597
F D + P++D+++Q++ L + +VGYV
Sbjct: 492 MQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYV 525
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 258 YSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
YS G + A +F+K EKNL W II +A+ GF ++A ++ + +E G PD +
Sbjct: 299 YSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLF 358
Query: 318 ISILTACAESGMLGLGKK--IHASVQRCRFRCSTKVLN--AFIDMYAKCGCLDAAFGIFS 373
I AC GMLG + +H + + + + + ++MYA G LD A
Sbjct: 359 RGIFYAC---GMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVE 415
Query: 374 KMTGKKDLVSWNSMIHGFGVHGQGE 398
+M + ++ W ++++ VHG E
Sbjct: 416 RMPMEPNVDVWETLMNLSRVHGNLE 440
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 188/420 (44%), Gaps = 23/420 (5%)
Query: 78 PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
P P++ +N L+ A A L S MQR G+ + +TY L+ S + L
Sbjct: 6 PLPSIFEFNKLLSAIA-KMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMI 193
+ + K G+ I +SL++ Y C G I A+ L M E D +T+ ++I
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGY--CHGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 194 GGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQ 245
GL A L D M +R ++V++ +++G K G+++ AF L ++M ++
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 246 WNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVL 301
+++ ++T++ + +D A LF + K N+V ++++IS G +A+ L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 302 YDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAK 361
M E + P+ +++ A + G +K+H + + N+ I+ +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 362 CGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
LD A +F M K DL ++N++I GF + E ELF M H G D T
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
+ L+ H G D + F M G+ P I Y ++D L G LE+A E+ M
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 189/412 (45%), Gaps = 25/412 (6%)
Query: 116 PDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM 175
P F + LL A LV + +++ G +++ N LI+ + R + + A+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 176 --RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAK 229
++ E VT +S++ G G + A L D+M E D +++ T++ G
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 230 AGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCP----EKNLVL 281
+ ++A L DRM+Q N++++ +V G + GD+D+A L +K E ++V+
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ 341
+ TII + + +A L+ +ME G++P+ S+++ G ++ + +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 342 RCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGE 398
+ + NA ID + K G A + M + D+ ++NS+I+GF +H + +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 399 KALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCM 458
KA ++F MV + PD T+ L+ + V+ G F M G+V Y +
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVGDTVTYTTL 366
Query: 459 IDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLL-GACRMHNDVELARAL 506
I L G + A ++ + M V P+ + LL G C N+ +L +AL
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC---NNGKLEKAL 415
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 169/394 (42%), Gaps = 59/394 (14%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVHLYN 86
++DL + ++ A + D+ + +I + RH+ A+N+F ++ PNV Y+
Sbjct: 165 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 224
Query: 87 SLIRAHALNG--SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
SLI G S S S M + + P+ T+ L+ A + +H +
Sbjct: 225 SLISCLCSYGRWSDASQLLS---DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 281
Query: 145 EKFGFYEDIFVPNSLI----------------------------DSYSR-----CGGVGI 171
K DIF NSLI D+Y+ C +
Sbjct: 282 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 341
Query: 172 DGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTM 223
+ LF M R D VT+ ++I GL GD D A K+F +M D+++++ +
Sbjct: 342 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Query: 224 LDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK-- 277
LDG G++ KA E+FD M ++ +I ++TM+ G +AG +D LF K
Sbjct: 402 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 461
Query: 278 --NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKK 335
N+V + T+ISG K ++EA L KM+E G PD G +++ A G +
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 336 IHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
+ ++ CRF + +M G LD +F
Sbjct: 522 LIREMRSCRFVGDASTIGLVANMLHD-GRLDKSF 554
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 132/545 (24%), Positives = 236/545 (43%), Gaps = 72/545 (13%)
Query: 67 ISSAVNVFNQV----PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYP 122
+ AVN+F + P+P++ ++ L+ A A + L S MQ G+ + +TY
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIA-KMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 123 FLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
L+ S L L + A + K G+ DI NSL++ + C G I A+ L M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF--CHGNRISDAVSLVGQMV 178
Query: 183 ER---------------------------------------DAVTWNSMIGGLVRGGDLD 203
E D VT+ ++ GL + GD+D
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 204 GAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMV 255
A L +M E +V +NT++D +N A LF M ++ N++++++++
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 256 ---CGYSRAGDMDMARMLFDKCPEK---NLVLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
C Y R D +R+L D K N+V ++ +I + ++G + EA LYD+M +
Sbjct: 299 RCLCNYGRWS--DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
+ PD S++ L K + + + N I + K +D
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 370 GIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCAC 426
+F +M+ + + V++ ++IHGF + + A +F MV +G PD T+ LL
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGL 476
Query: 427 THAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPN 483
+ G V+ F +++ + P I Y MI+ + + G +E+ ++L S+ V+PN
Sbjct: 477 CNNGKVETALVVFEYLQR-SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535
Query: 484 AIVVGTLL-GACRMHNDVELARALSEHLFKLVP-SDPGNFSLLSNIYAQAGDWMNVASVR 541
+ T++ G CR E A AL + + P D G ++ L + + GD A +
Sbjct: 536 VVTYTTMMSGFCR-KGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Query: 542 LQMKN 546
+M++
Sbjct: 595 REMRS 599
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 219/493 (44%), Gaps = 67/493 (13%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNVH 83
R S L L + A+++K D+ L+ F IS AV++ Q+ P+
Sbjct: 128 RRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSF 187
Query: 84 LYNSLIRAHAL-NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
+N+LI H L + S + M +G PD TY ++ + L +
Sbjct: 188 TFNTLI--HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVR 198
+E+ + + N++ID+ C ++ A+ LF+ M+ + + VT+NS+I L
Sbjct: 246 KMEQGKIEPGVVIYNTIIDAL--CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 199 GGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIIS 250
G A +L +M ER ++V+++ ++D + K G++ +A +L+D M++ +I +
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 251 WSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKME 306
+S+++ G+ +D A+ +F+ K N+V + T+I G+ + + E L+ +M
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 307 EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLD 366
+ GL + ++ IH Q +C D
Sbjct: 424 QRGLVGNTVTYTTL---------------IHGFFQA-----------------REC---D 448
Query: 367 AAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL 423
A +F +M D+++++ ++ G +G+ E AL +F + EPD YT+ ++
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMI 508
Query: 424 CACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE-- 481
AG V+ G + F S+ + G+ P + Y M+ R G EEA L R M E
Sbjct: 509 EGMCKAGKVEDGWDLFCSLS-LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567
Query: 482 -PNAIVVGTLLGA 493
P++ TL+ A
Sbjct: 568 LPDSGTYNTLIRA 580
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 173/396 (43%), Gaps = 63/396 (15%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVF----NQVPYPNVHLYN 86
++DL + ++ + + + + +I A ++++ A+N+F N+ PNV YN
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 87 SLIRAHALNG--SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
SLIR G S S S M + P+ T+ L+ A L + ++ +
Sbjct: 296 SLIRCLCNYGRWSDASRLLS---DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERD----AVTWNSMIGGLVRGG 200
K DIF +SLI+ + C +D A +F M +D VT+N++I G +
Sbjct: 353 IKRSIDPDIFTYSSLINGF--CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 201 DLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQ----WNIISWS 252
+D +LF EM +R + V++ T++ G+ +A E + A +F +M+ +I+++S
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 253 TMVCGYSRAGDMDMARMLFD---------------------------------------K 273
++ G G ++ A ++F+ K
Sbjct: 471 ILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 274 CPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
+ N+V +TT++SG+ KG +EA L+ +M+E G PD G +++ A G
Sbjct: 531 GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAAS 590
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
++ ++ CRF + +M G LD +F
Sbjct: 591 AELIREMRSCRFVGDASTIGLVTNMLHD-GRLDKSF 625
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/551 (23%), Positives = 233/551 (42%), Gaps = 80/551 (14%)
Query: 67 ISSAVNVFNQV----PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYP 122
+ AV++F + P+P++ +N L+ A A + L S MQ G+ D +TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVA-KMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 123 FLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
+ S L L + A + K G+ DI +SL++ Y C I A+ L M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY--CHSKRISDAVALVDQMV 180
Query: 183 ER---------------------------------------DAVTWNSMIGGLVRGGDLD 203
E D VT+ +++ GL + GD+D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 204 GAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMV 255
A L +M E D+V +NT++DG K M+ A LF M ++ ++ ++S+++
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 256 ---CGYSRAGDMDMARMLFDKCPEK---NLVLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
C Y R D +R+L D K N+V ++ +I + ++G + EA LYD+M +
Sbjct: 301 SCLCNYGRWS--DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
+ PD S++ L K + + + + I + K ++
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 370 GIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCAC 426
+F +M+ + + V++ ++IHGF + A +F MV G P+ T+ LL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 427 THAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPN 483
G + K F +++ + P I Y MI+ + + G +E+ +EL ++ V PN
Sbjct: 479 CKNGKLAKAMVVFEYLQR-STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 484 AIVVGTLL-GACRMHNDVELARALSEHLFKLVPSD-----PGNFSLLSNIYAQAGDWMNV 537
I T++ G CR + E ++ L K + D G ++ L + GD
Sbjct: 538 VIAYNTMISGFCRKGSKEE-----ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREAS 592
Query: 538 ASVRLQMKNAG 548
A + +M++ G
Sbjct: 593 AELIKEMRSCG 603
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/503 (21%), Positives = 212/503 (42%), Gaps = 63/503 (12%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNVH 83
R S L L + A+++K D+ L+ + + IS AV + +Q+ P+
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+ +LI L+ + S + M + G PD TY ++ + L +
Sbjct: 190 TFTTLIHGLFLH-NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRG 199
+EK D+ + N++ID C +D A+ LF+ M+ + D T++S+I L
Sbjct: 249 MEKGKIEADVVIYNTIIDGL--CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 200 GDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW--------- 246
G A +L +M ER ++V+++ ++D + K G++ +A +L+D M++
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Query: 247 ------------------------------NIISWSTMVCGYSRAGDMDMARMLFDKCPE 276
N++++ST++ G+ +A ++ LF + +
Sbjct: 367 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 277 K----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGL 332
+ N V +TT+I G+ + A +++ +M G+ P+ +L ++G L
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Query: 333 GKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIH 389
+ +QR N I+ K G ++ + +F ++ K +++++N+MI
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 390 GFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIV 449
GF G E+A L M +G P+ T+ L+ A G + M G
Sbjct: 547 GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSC-GFA 605
Query: 450 PQIEHYGCMIDLLSRGGHLEEAF 472
G + ++L G L+++F
Sbjct: 606 GDASTIGLVTNML-HDGRLDKSF 627
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 180/406 (44%), Gaps = 30/406 (7%)
Query: 169 VGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSW 220
+ +D A+ LF M + V +N ++ + + + L ++M D+ ++
Sbjct: 62 IKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTY 121
Query: 221 NTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPE 276
+ ++ + + +++ A + +M++ +I++ S+++ GY + + A L D+ E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 277 ----KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGL 332
+ +TT+I G EA L D+M + G +PD +++ + G + L
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 333 GKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIH 389
+ +++ + + N ID K +D A +F++M K D+ +++S+I
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 390 GFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIV 449
+G+ A L S M+ P+ TF L+ A G + + ++ M K I
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSID 360
Query: 450 PQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLL-GAC---RMHNDVEL 502
P I Y +I+ L+EA FEL+ S PN + TL+ G C R+ +EL
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 503 ARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAG 548
R +S+ + + + ++ L + + QA D N V QM + G
Sbjct: 421 FREMSQ---RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 463
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 117/226 (51%), Gaps = 5/226 (2%)
Query: 291 EKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK 350
++ K+A L DK G PD + + +CA L KK+H + +FR K
Sbjct: 217 QRRLYKDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPK 272
Query: 351 VLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHE 410
+ N I M+ +C + A +F M KD+ SW+ M+ + +G G+ AL LF M
Sbjct: 273 LNNMVISMFGECSSITDAKRVFDHMV-DKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH 331
Query: 411 GFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEE 470
G +P++ TF+ + AC G +++ +F+SM+ +GI P+ EHY ++ +L + GHL E
Sbjct: 332 GLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVE 391
Query: 471 AFELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPS 516
A + +R +P EP A + R+H D++L + E + + PS
Sbjct: 392 AEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPS 437
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 112 EGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGI 171
+G PD + L ++C SL + +H H + F D + N +I + C I
Sbjct: 230 KGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS--SI 287
Query: 172 DGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMV----SWNTMLDGY 227
A R+F M ++D +W+ M+ G D A LF+EM + + ++ T+
Sbjct: 288 TDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLAC 347
Query: 228 AKAGEMNKAFELFDRMLQWNIISWST 253
A G + +AF FD M + IS T
Sbjct: 348 ATVGGIEEAFLHFDSMKNEHGISPKT 373
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 218/500 (43%), Gaps = 33/500 (6%)
Query: 9 IPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHIS 68
+PT RL + + DLV + Q+ + +LY +I F CR +
Sbjct: 85 LPTVIDFSRLFS----AIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLC 140
Query: 69 SAVNVFNQVPY----PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFL 124
A + ++ PN +++LI L G S M G PD T L
Sbjct: 141 LAFSAMGKIIKLGYEPNTITFSTLINGLCLEG-RVSEALELVDRMVEMGHKPDLITINTL 199
Query: 125 LKA-CTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE 183
+ C + +I VE +G + +++ + G + AM L MEE
Sbjct: 200 VNGLCLSGKEAEAMLLIDKMVE-YGCQPNAVTYGPVLNVMCKSGQTAL--AMELLRKMEE 256
Query: 184 R----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNK 235
R DAV ++ +I GL + G LD AF LF+EM + +++++N ++ G+ AG +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 236 AFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL----VLWTTIIS 287
+L M++ N++++S ++ + + G + A L + + + + +T++I
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 288 GYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRC 347
G+ ++ + +A + D M G P+ ++ ++ + G ++ +
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 348 STKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELF 404
T N I + + G L+ A +F +M +K ++V++ ++ G +G+ EKALE+F
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 405 SSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSR 464
+ E D + ++ +A VD + F S+ + G+ P ++ Y MI L +
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP-LKGVKPGVKTYNIMIGGLCK 555
Query: 465 GGHLEEAFELLRSMPVEPNA 484
G L EA L R M + +A
Sbjct: 556 KGPLSEAELLFRKMEEDGHA 575
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 136/300 (45%), Gaps = 25/300 (8%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFH--MQREGVYPDNFTYPFLLKACTGPSSLPLV 137
PNV ++ LI + G L + H M G+ PD TY L+ + L
Sbjct: 331 PNVVTFSVLIDSFVKEGK---LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 138 -QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSM 192
QM+ V K G +I N LI+ Y C ID + LF M R D VT+N++
Sbjct: 388 NQMVDLMVSK-GCDPNIRTFNILINGY--CKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 193 IGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----L 244
I G G L+ A +LF EM R ++V++ +LDG GE KA E+F+++ +
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISGYAEKGFMKEATV 300
+ +I ++ ++ G A +D A LF P K + + +I G +KG + EA +
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 301 LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYA 360
L+ KMEE G PD ++ A G K+ ++RC F + IDM +
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 624
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 177/407 (43%), Gaps = 33/407 (8%)
Query: 165 RCGGVGI--DGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER--- 215
R G V I D A+ LF M + ++ + + + D L +M +
Sbjct: 61 RSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 216 -DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARML 270
++ + + M++ + + ++ AF ++++ N I++ST++ G G + A L
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 271 FDKCPE----KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
D+ E +L+ T+++G G EA +L DKM E G +P+ +L +
Sbjct: 181 VDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 240
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVS 383
SG L ++ ++ + + ID K G LD AF +F++M K ++++
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
+N +I GF G+ + +L M+ P+ TF L+ + G + + M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNA----IVVGTLLGACRM 496
GI P Y +ID + HL++A +L+ S +PN I++ A R+
Sbjct: 361 H-RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRI 419
Query: 497 HNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQ 543
+ +EL R +S + V +D ++ L + + G +NVA Q
Sbjct: 420 DDGLELFRKMS---LRGVVADTVTYNTLIQGFCELGK-LNVAKELFQ 462
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 202/442 (45%), Gaps = 31/442 (7%)
Query: 101 LTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLI 160
L + + + R GV + +T ++ A + V + V++ G Y DI N+LI
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI 277
Query: 161 DSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER- 215
+YS G ++ A L +AM + T+N++I GL + G + A ++F EM
Sbjct: 278 SAYSSKG--LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 216 ---DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----ISWSTMVCGYSRAGDMDMAR 268
D ++ ++L K G++ + ++F M ++ + +S+M+ ++R+G++D A
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 269 MLFDKCPEKNL----VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
M F+ E L V++T +I GY KG + A L ++M + G D +IL
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DL 381
+ MLG K+ + + L ID + K G L A +F KM K+ D+
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA-CTHAGLVDKGRNYFN 440
V++N+++ GFG G + A E+++ MV + P ++ L+ A C+ L + R +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 441 SMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE---PNAIVVGTLL-GACRM 496
+ K I P + MI R G+ + L M E P+ I TL+ G R
Sbjct: 576 MISK--NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVRE 633
Query: 497 HNDVE---LARALSEHLFKLVP 515
N + L + + E LVP
Sbjct: 634 ENMSKAFGLVKKMEEEQGGLVP 655
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/494 (21%), Positives = 219/494 (44%), Gaps = 31/494 (6%)
Query: 81 NVHLYNSLIRAHALNGSHPSLTFSTFF-HMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
NV+ N ++ A +G + TF +Q +GVYPD TY L+ A + +
Sbjct: 234 NVYTLNIMVNALCKDGKMEKV--GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGG 195
+ + GF ++ N++I+ + G + A +F+ M D+ T+ S++
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKY--ERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 196 LVRGGDLDGAFKLFDEMPERD----MVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS- 250
+ GD+ K+F +M RD +V +++M+ + ++G ++KA F+ + + +I
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 251 ---WSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYD 303
++ ++ GY R G + +A L ++ ++ ++V + TI+ G ++ + EA L++
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 304 KMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
+M E L PD L ++ + G L ++ ++ R R N +D + K G
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 364 CLDAAFGIFSKMTGKKDL---VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFI 420
+D A I++ M K+ L +S++ +++ G +A ++ M+ + +P
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 421 GLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPV 480
++ +G G ++ M G VP Y +I R ++ +AF L++ M
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMIS-EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648
Query: 481 E-----PNAIVVGTLL-GACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDW 534
E P+ ++L G CR + E L + + + V D ++ + N + +
Sbjct: 649 EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNL 708
Query: 535 MNVASVRLQMKNAG 548
+ +M G
Sbjct: 709 TEAFRIHDEMLQRG 722
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 185/435 (42%), Gaps = 92/435 (21%)
Query: 79 YPNVHLYNSLIRAHALNG----------SHPSLTFS------------------------ 104
YP++ YN+LI A++ G + P FS
Sbjct: 267 YPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKE 326
Query: 105 TFFHMQREGVYPDNFTY-PFLLKAC----------------------------------T 129
F M R G+ PD+ TY L++AC T
Sbjct: 327 VFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 386
Query: 130 GPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----D 185
+L M V++ G D + LI Y R G + + AM L + M ++ D
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV--AMNLRNEMLQQGCAMD 444
Query: 186 AVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFD 241
VT+N+++ GL + L A KLF+EM ER D + ++DG+ K G + A ELF
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 242 RM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL----VLWTTIISGYAEKG 293
+M ++ ++++++T++ G+ + GD+D A+ ++ K + + ++ +++ KG
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 294 FMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLN 353
+ EA ++D+M +KP + S++ SG G+ + F N
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 354 AFIDMYAKCGCLDAAFGIFSKMTGKK-----DLVSWNSMIHGFGVHGQGEKALELFSSMV 408
I + + + AFG+ KM ++ D+ ++NS++HGF Q ++A + M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 409 HEGFEPDKYTFIGLL 423
G PD+ T+ ++
Sbjct: 685 ERGVNPDRSTYTCMI 699
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 195/471 (41%), Gaps = 98/471 (20%)
Query: 40 AQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNVHLYNSLIRAHALN 95
+Q+ + ++ D+ LI+A+S + A + N +P P V+ YN++I +
Sbjct: 259 SQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKH 318
Query: 96 GSHPSLTFSTFFHMQREGVYPDNFTY-PFLLKAC-------------------------- 128
G + F M R G+ PD+ TY L++AC
Sbjct: 319 GKYERAK-EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377
Query: 129 --------TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSA 180
T +L M V++ G D + LI Y R G + + AM L +
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV--AMNLRNE 435
Query: 181 MEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGE 232
M ++ D VT+N+++ GL + L A KLF+EM ER D + ++DG+ K G
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 233 MNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL----VLWTT 284
+ A ELF +M ++ ++++++T++ G+ + GD+D A+ ++ K + + ++
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 285 IISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCR 344
+++ KG + EA ++D+M +KP + S++ SG G+ +
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 345 FRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK-----DLVSWNSMIHGFGVHGQGEK 399
F N I + + + AFG+ KM ++ D+ ++NS++HGF Q ++
Sbjct: 616 FVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKE 675
Query: 400 A-----------------------------------LELFSSMVHEGFEPD 415
A + M+ GF PD
Sbjct: 676 AEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 202/465 (43%), Gaps = 29/465 (6%)
Query: 92 HALNGSHPSLTFSTFFH-MQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFY 150
H N H SL+ S H + R G D + + +G S L +V + + G
Sbjct: 105 HFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSN 164
Query: 151 EDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVT----WNSMIGGLVRGGDLDGAF 206
+ +F + LI +Y + + A F+ + + N++IG LVR G ++ A+
Sbjct: 165 DSVF--DLLIRTYVQ--ARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAW 220
Query: 207 KLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGY 258
++ E+ ++ + N M++ K G+M K ++ + +I++++T++ Y
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 259 SRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
S G M+ A L + P K + + T+I+G + G + A ++ +M +GL PD
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 315 GVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSK 374
S+L + G + +K+ + ++ ++ + ++ + G LD A F+
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 375 MTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGL 431
+ D V + +I G+ G A+ L + M+ +G D T+ +L +
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 460
Query: 432 VDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVG 488
+ + FN M + + P +ID + G+L+ A EL + M + + +
Sbjct: 461 LGEADKLFNEMTE-RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 489 TLLGACRMHNDVELARAL-SEHLFKLVPSDPGNFSLLSNIYAQAG 532
TLL D++ A+ + ++ + K + P ++S+L N G
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 146/347 (42%), Gaps = 66/347 (19%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYP----NVH 83
R NLD + +A L D + LI + IS A+N+ N++ +V
Sbjct: 387 RSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVV 446
Query: 84 LYNSLIRA---HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
YN+++ + G L F M ++PD++T L+ +L +
Sbjct: 447 TYNTILHGLCKRKMLGEADKL----FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERD----AVTWNSMIGGL 196
+++ D+ N+L+D + + G ID A +++ M ++ ++++ ++ L
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGD--IDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 197 VRGGDLDGAFKLFDEMPER---------------------------------------DM 217
G L AF+++DEM + D
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRM------LQWNIISWSTMVCGYSRAGDMDMARMLF 271
+S+NT++ G+ + M+KAF L +M L ++ ++++++ G+ R M A ++
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 272 DKCPEKNL----VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD 314
K E+ + +T +I+G+ + + EA ++D+M + G PDD
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 196/460 (42%), Gaps = 75/460 (16%)
Query: 66 HISSAVNVFNQVPYP----NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTY 121
+SSA N+FN + +V+ Y SLI A A +G + + F M+ +G P TY
Sbjct: 188 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYRE-AVNVFKKMEEDGCKPTLITY 246
Query: 122 PFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAM 181
+L G P + I + VEK D P
Sbjct: 247 NVILNVF-GKMGTPWNK-ITSLVEKMK--SDGIAP------------------------- 277
Query: 182 EERDAVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAF 237
DA T+N++I RG A ++F+EM D V++N +LD Y K+ +A
Sbjct: 278 ---DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAM 334
Query: 238 ELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKE 297
++ + M+ + G+S ++V + ++IS YA G + E
Sbjct: 335 KVLNEMV----------LNGFS-----------------PSIVTYNSLISAYARDGMLDE 367
Query: 298 ATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFID 357
A L ++M E G KPD ++L+ +G + I ++ + + NAFI
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 358 MYAKCGCLDAAFGIFSKMTG---KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEP 414
MY G IF ++ D+V+WN+++ FG +G + +F M GF P
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 415 DKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFEL 474
++ TF L+ A + G ++ + M G+ P + Y ++ L+RGG E++ ++
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKV 546
Query: 475 LRSMP---VEPNAIVVGTLLGACRMHNDVELARALSEHLF 511
L M +PN + +LL A ++ L +L+E ++
Sbjct: 547 LAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 130/564 (23%), Positives = 225/564 (39%), Gaps = 109/564 (19%)
Query: 50 DLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNVHLYNSLIRAHALNGSHPSLTFST 105
D+Y LI+AF+ AVNVF ++ P + YN ++ G+ + S
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
M+ +G+ PD +TY L+ C S + ++ GF D N+L+D Y +
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 166 CGGVGIDGAMRLFSAME----ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DM 217
AM++ + M VT+NS+I R G LD A +L ++M E+ D+
Sbjct: 327 SHRP--KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRM---------------------------------- 243
++ T+L G+ +AG++ A +F+ M
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 244 -----LQWNIISWSTMVCGYSRAGDMD---------MARMLFDKCPEKNLVLWTTIISGY 289
L +I++W+T++ + + G MD M R F PE+ + T+IS Y
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNG-MDSEVSGVFKEMKRAGF--VPERE--TFNTLISAY 499
Query: 290 AEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQ--RCRFR- 346
+ G ++A +Y +M +AG+ PD ++L A A GM +K+ A ++ RC+
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 347 ---CS-----------------------------TKVLNAFIDMYAKCGCLDAAFGIFSK 374
CS +L + + +KC L A FS+
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 375 MTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGL 431
+ + D+ + NSM+ +G KA + M GF P T+ L+ + +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 432 VDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVG 488
K + GI P I Y +I R + +A F +R+ + P+ I
Sbjct: 680 FGKSEEILREI-LAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYN 738
Query: 489 TLLGACRMHNDVELARALSEHLFK 512
T +G+ + E A + ++ K
Sbjct: 739 TFIGSYAADSMFEEAIGVVRYMIK 762
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/475 (20%), Positives = 196/475 (41%), Gaps = 47/475 (9%)
Query: 13 FSPRRLLEEKLCTLH-RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAV 71
FSP + L + + R LD ++ Q+ + D++ L++ F + SA+
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 72 NVFNQVP----YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKA 127
++F ++ PN+ +N+ I+ + G + F + G+ PD T+ LL
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM-MKIFDEINVCGLSPDIVTWNTLLAV 463
Query: 128 CTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM----RLFSAMEE 183
V + +++ GF + N+LI +YSRCG + AM R+ A
Sbjct: 464 FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS--FEQAMTVYRRMLDAGVT 521
Query: 184 RDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM 243
D T+N+++ L RGG + + K+ EM DG K E+
Sbjct: 522 PDLSTYNTVLAALARGGMWEQSEKVLAEME-----------DGRCKPNEL---------- 560
Query: 244 LQWNIISWSTMVCGYSRAGDM----DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEAT 299
++ +++ Y+ ++ +A ++ E VL T++ ++ + EA
Sbjct: 561 ------TYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAE 614
Query: 300 VLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMY 359
+ +++E G PD L S+++ M+ + ++ F S N+ + M+
Sbjct: 615 RAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMH 674
Query: 360 AKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDK 416
++ + I ++ K D++S+N++I+ + + + A +FS M + G PD
Sbjct: 675 SRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDV 734
Query: 417 YTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
T+ + + + ++ M K +G P Y ++D + +EA
Sbjct: 735 ITYNTFIGSYAADSMFEEAIGVVRYMIK-HGCRPNQNTYNSIVDGYCKLNRKDEA 788
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 224/528 (42%), Gaps = 67/528 (12%)
Query: 13 FSPR-RLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLI---AAFSLCRHIS 68
FSP L EE L L R + D +K+I + + LI A F L I
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 69 SAVN-VFNQVPY-PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLK 126
S V+ + ++ P+ H YN ++ ++G+ L + M G+ PD T+ L+K
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNL-LVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 127 A-CTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER- 184
A C P + M+ + +G D +++ Y G +DGA+R+ M E
Sbjct: 198 ALCRAHQLRPAILMLE-DMPSYGLVPDEKTFTTVMQGYIEEGD--LDGALRIREQMVEFG 254
Query: 185 ---DAVTWNSMIGGLVRGGDLDGAFKLFDEMPERD-----MVSWNTMLDGYAKAGEMNKA 236
V+ N ++ G + G ++ A EM +D ++NT+++G KAG + A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 237 FELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISG 288
E+ D MLQ ++ ++++++ G + G++ A + D+ + N V + T+IS
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 289 YAEKGFMKEATVL-----------------------------------YDKMEEAGLKPD 313
++ ++EAT L +++M G +PD
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 314 DGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFS 373
+ ++ + G L + ++ S N ID + K A IF
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 374 KMTG---KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAG 430
+M ++ V++N++I G + E A +L M+ EG +PDKYT+ LL G
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 431 LVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
+ K + +M G P I YG +I L + G +E A +LLRS+
Sbjct: 555 DIKKAADIVQAMTS-NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 196/464 (42%), Gaps = 63/464 (13%)
Query: 113 GVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGID 172
G+ PD Y +L +SL LV++ HA + +G D+ N LI + C +
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL--CRAHQLR 206
Query: 173 GAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTML 224
A+ + M D T+ +++ G + GDLDGA ++ ++M E VS N ++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 225 DGYAKAGEMNKAFELFDRMLQWN-----IISWSTMVCGYSRAGDMDMARMLFDKCPEK-- 277
G+ K G + A M + +++T+V G +AG + A + D ++
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 278 --NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD---GVLISILTACAESGMLGL 332
++ + ++ISG + G +KEA + D+M P+ LIS L C E+
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL--CKEN----- 379
Query: 333 GKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFG 392
++ + + R S +L D+ ++NS+I G
Sbjct: 380 --QVEEATELARVLTSKGIL--------------------------PDVCTFNSLIQGLC 411
Query: 393 VHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQI 452
+ A+ELF M +G EPD++T+ L+ + G +D+ N ME + G +
Sbjct: 412 LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME-LSGCARSV 470
Query: 453 EHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLL-GACRMHNDVELARALSE 508
Y +ID + EA E+ M V N++ TL+ G C+ + A+ + +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 509 HLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKP 552
+ + D ++ L + + GD A + +Q + G +P
Sbjct: 531 MIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI-VQAMTSNGCEP 573
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 121/258 (46%), Gaps = 19/258 (7%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P+V +NSLI+ L +H + F M+ +G PD FTY L+ + L
Sbjct: 398 PDVCTFNSLIQGLCLTRNH-RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME----ERDAVTWNSMIGG 195
+ +E G + N+LID + C A +F ME R++VT+N++I G
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGF--CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 196 LVRGGDLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELFDRML----QWN 247
L + ++ A +L D+M + D ++N++L + + G++ KA ++ M + +
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL----WTTIISGYAEKGFMKEATVLYD 303
I+++ T++ G +AG +++A L K + L + +I G K EA L+
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFR 634
Query: 304 KMEEAGLKPDDGVLISIL 321
+M E P D V I+
Sbjct: 635 EMLEQNEAPPDAVSYRIV 652
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 197/418 (47%), Gaps = 22/418 (5%)
Query: 78 PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
P P++ ++ ++ A + ++ L S F HM+ G+ D ++Y ++ S +
Sbjct: 65 PLPSIVDFSKVLSKIAKSKNY-DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 123
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMI 193
+ + KFG+ D+ +SLI+ + C G + A+ L S MEE D V +N++I
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGF--CQGNRVFDAIDLVSKMEEMGFRPDVVIYNTII 181
Query: 194 GGLVRGGDLDGAFKLFDEMPERD-----MVSWNTMLDGYAKAGEMNKAFELFDRMLQW-- 246
G + G ++ A +LFD M ERD V++N+++ G +G + A L M+
Sbjct: 182 DGSCKIGLVNDAVELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI 240
Query: 247 --NIISWSTMVCGYSRAGDMDMARMLFD----KCPEKNLVLWTTIISGYAEKGFMKEATV 300
N+I+++ ++ + + G A L++ +C + ++ + ++I+G G + EA
Sbjct: 241 VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQ 300
Query: 301 LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYA 360
+ D M G PD +++ +S + G K+ + + T N I Y
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 361 KCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFI 420
+ G DAA IFS+M + ++ +++ +++G ++ + EKAL LF +M E D T+
Sbjct: 361 QAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 421 GLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
++ G V+ + F S+ G+ P + Y MI R +++ L R M
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLS-CKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 191/413 (46%), Gaps = 29/413 (7%)
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
F M + P + +L + LV + H+E G D++ N +I+ R
Sbjct: 57 FCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCR 116
Query: 166 CG----GVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DM 217
C + + G M F E D VT +S+I G +G + A L +M E D+
Sbjct: 117 CSRFVIALSVVGKMMKFGY--EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGD-MDMARMLFD 272
V +NT++DG K G +N A ELFDRM ++ + ++++++V G +G D AR++ D
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 273 KCPEK---NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGM 329
N++ +T +I + ++G EA LY++M + PD S++ G
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 330 LGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNS 386
+ K++ + N I+ + K +D +F +M + D +++N+
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNT 354
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
+I G+ G+ + A E+FS M P+ T+ LL V+K F +M+K
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK-S 410
Query: 447 GIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLL-GACR 495
I I Y +I + + G++E+A++L RS+ ++P+ + T++ G CR
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCR 463
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 184/392 (46%), Gaps = 32/392 (8%)
Query: 81 NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKA-CTGPSSLPLVQM 139
+++ YN +I S + S M + G PD T L+ C G + +
Sbjct: 103 DLYSYNIVINCLC-RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGG 195
+ + +E+ GF D+ + N++ID + G V + A+ LF ME DAVT+NS++ G
Sbjct: 162 V-SKMEEMGFRPDVVIYNTIIDGSCKIGLV--NDAVELFDRMERDGVRADAVTYNSLVAG 218
Query: 196 LVRGGDLDGAFKLFDEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDRMLQW----N 247
L G A +L +M RD+V ++ ++D + K G+ ++A +L++ M + +
Sbjct: 219 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYD 303
+ ++++++ G G +D A+ + D K ++V + T+I+G+ + + E T L+
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 304 KMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
+M + GL D +I+ ++G ++I + R + I +Y C
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS-----RMDSRPNIRTYSILLYGLCM 393
Query: 364 C--LDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
++ A +F M + D+ ++N +IHG G E A +LF S+ +G +PD +
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP 450
+ ++ DK + M++ G++P
Sbjct: 454 YTTMISGFCRKRQWDKSDLLYRKMQE-DGLLP 484
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 155/341 (45%), Gaps = 16/341 (4%)
Query: 187 VTWNSMIGGLVRGGDLDGAFKLFDEMPE----RDMVSWNTMLDGYAKAGEMNKAFELFDR 242
V ++ ++ + + + D LF M D+ S+N +++ + A + +
Sbjct: 70 VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 243 MLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPE----KNLVLWTTIISGYAEKGF 294
M+++ ++++ S+++ G+ + + A L K E ++V++ TII G + G
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGL 189
Query: 295 MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNA 354
+ +A L+D+ME G++ D S++ SG ++ + + A
Sbjct: 190 VNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTA 249
Query: 355 FIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
ID++ K G A ++ +MT + D+ ++NS+I+G +HG+ ++A ++ MV +G
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
PD T+ L+ + VD+G F M + G+V Y +I + G + A
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 472 FELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFK 512
E+ M PN LL M+ VE A L E++ K
Sbjct: 369 QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 157/374 (41%), Gaps = 90/374 (24%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPN 81
L RCS + + +++K D+ LI F + A+++ +++ P+
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 82 VHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLK--ACTG--------- 130
V +YN++I G F M+R+GV D TY L+ C+G
Sbjct: 174 VVIYNTIIDGSCKIGLVND-AVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 131 ---------PSSLPLVQMIHAHVEKFGFYE---------------DIFVPNSLIDSYSRC 166
P+ + +I V++ F E D+F NSLI+
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 167 GGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMV 218
G V D A ++ M + D VT+N++I G + +D KLF EM +R D +
Sbjct: 293 GRV--DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 219 SWNTMLDGYAKAGEMNKAFELFDRM----------------------------------- 243
++NT++ GY +AG + A E+F RM
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
Query: 244 -LQWNIISWSTMVCGYSRAGDM----DMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEA 298
++ +I +++ ++ G + G++ D+ R L K + ++V +TT+ISG+ K ++
Sbjct: 411 EIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Query: 299 TVLYDKMEEAGLKP 312
+LY KM+E GL P
Sbjct: 471 DLLYRKMQEDGLLP 484
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/533 (24%), Positives = 228/533 (42%), Gaps = 64/533 (12%)
Query: 29 CS--NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNV 82
CS +LD I +++ + ++ + LI F A+ V ++ P++
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 83 HLYNSLI----RAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQ 138
YNSLI +A ++ + S M G+ P+ FTY + S
Sbjct: 488 FCYNSLIIGLSKAKRMDEAR-----SFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER---DAVTWNSMIGG 195
+ + G + + LI+ Y + G V I+ S +++ DA T+ ++ G
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKV-IEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 196 LVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----N 247
L + +D A ++F EM + D+ S+ +++G++K G M KA +FD M++ N
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYD 303
+I ++ ++ G+ R+G+++ A+ L D+ K N V + TII GY + G + EA L+D
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 304 KMEEAGLKPDDGVLISILTACAESG-------MLGLGKKIHASVQRCRFRCSTKVLNAFI 356
+M+ GL PD V +++ C + G KK AS ST NA I
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCAS--------STAPFNALI 773
Query: 357 DMYAKCGCLDAAFGIFSKMT-------GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
+ K G + + +++ GK + V++N MI G E A ELF M +
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLE 469
P T+ LL G + F+ GI P Y +I+ + G
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAA-GIEPDHIMYSVIINAFLKEGMTT 892
Query: 470 EAFELLRSMPVEPNAIVVGTLL--GACRMH-------NDVELARALSEHLFKL 513
+A L+ M NA+ G L CR ++E+A + E++ +L
Sbjct: 893 KALVLVDQM-FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 156/372 (41%), Gaps = 83/372 (22%)
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
F M+ +G+ PD F+Y L+ + ++ I + + G ++ + N L+ + R
Sbjct: 615 FREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 166 CGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVS-- 219
G I+ A L M + +AVT+ ++I G + GDL AF+LFDEM + +V
Sbjct: 675 SGE--IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 220 --WNTMLDGYAKAGEMNKAFELF------------------------------------- 240
+ T++DG + ++ +A +F
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRL 792
Query: 241 -----DRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL----VLWTTIISGYAE 291
DR + N ++++ M+ + G+++ A+ LF + NL + +T++++GY +
Sbjct: 793 MDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
G E ++D+ AG++PD + I+ A + GM +TK
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM------------------TTKA 894
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
L M+AK D K + + +++ GF G+ E A ++ +MV
Sbjct: 895 LVLVDQMFAKNAVDDGC---------KLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ 945
Query: 412 FEPDKYTFIGLL 423
+ PD T I L+
Sbjct: 946 YIPDSATVIELI 957
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/394 (20%), Positives = 160/394 (40%), Gaps = 32/394 (8%)
Query: 152 DIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDE 211
D+ + LI ++ R G V + G LF +E T N +DGA KL +
Sbjct: 220 DVKTYHMLIIAHCRAGNVQL-GKDVLFKTEKEFRTATLN-----------VDGALKLKES 267
Query: 212 MPERDMV----SWNTMLDGYAKAGEMNKAFELFDRMLQWNII----SWSTMVCGYSRAGD 263
M + +V +++ ++DG K + A L M + ++S ++ G + +
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 264 MDMARMLFDKCPEKNL----VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
D A+ L + + ++ I +++G M++A L+D M +GL P S
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 320 ILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG-- 377
++ + G ++ +++ S + G LD A+ I +M
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 378 -KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
+ ++V + ++I F + + A+ + M +G PD + + L+ + A +D+ R
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGA 493
++ M + G+ P YG I A + ++ M V PN ++ L+
Sbjct: 508 SFLVEMVE-NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 494 -CRMHNDVELARALSEHLFKLVPSDPGNFSLLSN 526
C+ +E A + + + D +++L N
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 218/510 (42%), Gaps = 32/510 (6%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVH 83
R DLV + Q+ + +LY +I CR +S A + ++ P+
Sbjct: 84 RTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTV 143
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKA-CTGPSSLPLVQMIHA 142
+++LI L G S M G P T L+ C V +I
Sbjct: 144 TFSTLINGLCLEG-RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVR 198
VE GF + ++ + G + AM L MEER DAV ++ +I GL +
Sbjct: 203 MVET-GFQPNEVTYGPVLKVMCKSGQTAL--AMELLRKMEERKIKLDAVKYSIIIDGLCK 259
Query: 199 GGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----IS 250
G LD AF LF+EM + D++ + T++ G+ AG + +L M++ I ++
Sbjct: 260 DGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA 319
Query: 251 WSTMVCGYSRAGDMDMARMLFDKCPEKNL----VLWTTIISGYAEKGFMKEATVLYDKME 306
+S ++ + + G + A L + ++ + V +T++I G+ ++ + +A + D M
Sbjct: 320 FSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 307 EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLD 366
G P+ ++ ++ ++ G ++ + T N I + + G L+
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLE 439
Query: 367 AAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL 423
A +F +M ++ D+VS+ ++ G +G+ EKALE+F + E D + ++
Sbjct: 440 VAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII 499
Query: 424 CACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE-- 481
+A VD + F S+ + G+ P ++ Y MI L + G L EA L R M +
Sbjct: 500 HGMCNASKVDDAWDLFCSLP-LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558
Query: 482 -PNAIVVGTLLGACRMHNDVELARALSEHL 510
PN L+ A D + L E +
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/481 (24%), Positives = 218/481 (45%), Gaps = 44/481 (9%)
Query: 100 SLTFSTFFHMQREGVYPDNFTYPFLLKA-CTGPSSLPLVQMIHAHVEKFGFYEDIFVPNS 158
SL FS + + G PD T+ L+ C ++++ VE G + N+
Sbjct: 124 SLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE-MGHKPTLITLNA 182
Query: 159 LIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPE 214
L++ G V A+ L M E + VT+ ++ + + G A +L +M E
Sbjct: 183 LVNGLCLNGKVS--DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 215 R----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDM 266
R D V ++ ++DG K G ++ AF LF+ M + +II ++T++ G+ AG D
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 267 -ARMLFDKCPEK---NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILT 322
A++L D K ++V ++ +I + ++G ++EA L+ +M + G+ PD S++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 323 A-CAESGMLGLGKKIHASVQRCRFRC--STKVLNAFIDMYAKCGCLDAAFGIFSKMTGK- 378
C E+ + + V + C + + N I+ Y K +D +F KM+ +
Sbjct: 361 GFCKENQLDKANHMLDLMVSK---GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 379 --KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGR 436
D V++N++I GF G+ E A ELF MV PD ++ LL G +K
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGA 493
F +EK + I Y +I + +++A++L S+P V+P+ ++G
Sbjct: 478 EIFEKIEK-SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGG 536
Query: 494 -CRMHNDVELARALSEHLFKLVPSD---PG--NFSLLSNIYAQAGDWMNVASVRLQMKNA 547
C+ + E ++ LF+ + D P +++L + GD A + ++K
Sbjct: 537 LCKKGSLSE-----ADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRC 591
Query: 548 G 548
G
Sbjct: 592 G 592
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 137/300 (45%), Gaps = 25/300 (8%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFH--MQREGVYPDNFTYPFLLKACTGPSSLPLV 137
P+V +++LI G L + H M + G+ PD TY L+ + L
Sbjct: 315 PDVVAFSALIDCFVKEGK---LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 138 Q-MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSM 192
M+ V K G +I N LI+ Y C ID + LF M R D VT+N++
Sbjct: 372 NHMLDLMVSK-GCGPNIRTFNILINGY--CKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 193 IGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----L 244
I G G L+ A +LF EM R D+VS+ +LDG GE KA E+F+++ +
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 245 QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATV 300
+ +I ++ ++ G A +D A LF P K ++ + +I G +KG + EA +
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 301 LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYA 360
L+ KMEE G P+ ++ A G K+ ++RC F + +DM +
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 198/455 (43%), Gaps = 37/455 (8%)
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
Y +R L+ F+ FF M P + LL A V +
Sbjct: 38 YREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM 97
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAM----EERDAVTWNSMIGGLVRGG 200
E +G D++ LI + RC + A+ + M E VT+ S++ G
Sbjct: 98 ELYGISHDLYSFTILIHCFCRCSRLSF--ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVN 155
Query: 201 DLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWS 252
+ AF L M E ++V +NT++DG K GE+N A EL + M L ++++++
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 253 TMVCGYSRAGD-MDMARMLFD---KCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEA 308
T++ G +G D ARML D + ++V +T +I + ++G + EA LY +M ++
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 309 GLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAA 368
+ P++ SI+ G L KK + + N I + K +D
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEG 335
Query: 369 FGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA 425
+F +M+ + D+ ++N++IHG+ G+ AL++F MV PD T LL
Sbjct: 336 MKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHG 395
Query: 426 CTHAGLVDKGRNYFNSM---EKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE- 481
G ++ F+ M EK GIV Y MI L + +E+A+EL +PVE
Sbjct: 396 LCVNGEIESALVKFDDMRESEKYIGIVA----YNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 482 --PNAIVVGTL-LGAC----RMHNDVELARALSEH 509
P+A + LG C R D EL R + E
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREAD-ELIRRMKEE 485
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 196/447 (43%), Gaps = 71/447 (15%)
Query: 47 LHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSL-TFST 105
+ DLY LI F C +S A++V ++ G PS+ TF +
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL---------------GYEPSIVTFGS 146
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
H F L G + ++ M+ K G+ ++ V N+LID +
Sbjct: 147 LLH-------------GFCLVNRIGDAFSLVILMV-----KSGYEPNVVVYNTLIDGLCK 188
Query: 166 CGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DM 217
G + I A+ L + ME++ D VT+N+++ GL G A ++ +M +R D+
Sbjct: 189 NGELNI--ALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----ISWSTMVCGYSRAGDMDMARMLFDK 273
V++ ++D + K G +++A EL+ M+Q ++ +++++++ G G + A+ FD
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 274 CPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGM 329
K N+V + T+ISG+ + + E L+ +M G D +++ + G
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 330 LGLGKKIHA-SVQRCRFRCSTKVLNAFIDMYAKC--GCLDAAFGIFSKMTGKKD---LVS 383
L + I V R R + ++ I ++ C G +++A F M + +V+
Sbjct: 367 LRVALDIFCWMVSR---RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
+N MIHG + EKA ELF + EG +PD T+ ++ G + M
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM- 482
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEE 470
K GI+ Q+ + HLEE
Sbjct: 483 KEEGIICQMN---------AEDDHLEE 500
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 135/301 (44%), Gaps = 23/301 (7%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSA---VNVFNQVPY-PNVH 83
RCS L + +++K + L+ F L I A V + + Y PNV
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+YN+LI NG ++ M+++G+ D TY LL +
Sbjct: 178 VYNTLIDGLCKNG-ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRG 199
+ K D+ +LID + + G +D A L+ M + + VT+NS+I GL
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQG--NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 200 GDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISW 251
G L A K FD M + ++V++NT++ G+ K +++ +LF RM +I ++
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 252 STMVCGYSRAGDMDMARMLF----DKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
+T++ GY + G + +A +F + +++ ++ G G ++ A V +D M E
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 308 A 308
+
Sbjct: 415 S 415
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 207/478 (43%), Gaps = 66/478 (13%)
Query: 78 PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
P P++ +N L+ A A L S MQR G+ + +TY L+ S + L
Sbjct: 81 PLPSIFEFNKLLSAIA-KMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 139
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER------------- 184
+ + K G+ I +SL++ Y C G I A+ L M E
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGY--CHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 185 --------------------------DAVTWNSMIGGLVRGGDLDGAFKLFDEMP----E 214
+ VT+ ++ GL + GD+D AF L ++M E
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 257
Query: 215 RDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMV---CGYSRAGDMDMA 267
++V ++T++D K + A LF M ++ N+I++S+++ C Y R D +
Sbjct: 258 ANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS--DAS 315
Query: 268 RMLFDKCPEK---NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC 324
R+L D K N+V + +I + ++G + EA LYD+M + + PD S++
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 325 AESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDL 381
L K + + + N I+ + K +D +F +M+ + +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 382 VSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNS 441
V++ ++IHGF + A +F MV +G P+ T+ LL G ++K F
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 442 MEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLL-GACR 495
+++ + P I Y MI+ + + G +E+ ++L S+ V+P+ I+ T++ G CR
Sbjct: 496 LQR-SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 194/425 (45%), Gaps = 21/425 (4%)
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
F M + P F + LL A LV + +++ G +++ N LI+ + R
Sbjct: 73 FGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCR 132
Query: 166 CGGVGIDGAM--RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVS 219
+ + A+ ++ E VT +S++ G G + A L D+M E D ++
Sbjct: 133 RSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT 192
Query: 220 WNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCP 275
+ T++ G + ++A L DRM+Q N++++ +V G + GD+D+A L +K
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 252
Query: 276 ----EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLG 331
E N+V+++T+I + +A L+ +ME G++P+ S+++
Sbjct: 253 AAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312
Query: 332 LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMI 388
++ + + + + NA ID + K G L A ++ +M + D+ +++S+I
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGI 448
+GF +H + ++A +F M+ + P+ T+ L+ A +D+G F M + G+
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ-RGL 431
Query: 449 VPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLLGACRMHNDVELARA 505
V Y +I + + A F+ + S V PN + TLL + +E A
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMV 491
Query: 506 LSEHL 510
+ E+L
Sbjct: 492 VFEYL 496
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 174/381 (45%), Gaps = 63/381 (16%)
Query: 63 LCRH--ISSAVNVFNQVPYP----NVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
LC+ I A N+ N++ NV +Y+++I + H + F M+ +GV P
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC-KYRHEDDALNLFTEMENKGVRP 293
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
+ TY L+ S + +Y R A R
Sbjct: 294 NVITYSSLI--------------------------------SCLCNYERWSD-----ASR 316
Query: 177 LFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYA 228
L S M ER + VT+N++I V+ G L A KL+DEM +R D+ +++++++G+
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 229 KAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLV 280
+++A +F+ M+ N+++++T++ G+ +A +D LF + ++ N V
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTV 436
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASV 340
+TT+I G+ + A +++ +M G+ P+ ++L ++G L + +
Sbjct: 437 TYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Query: 341 QRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT---GKKDLVSWNSMIHGFGVHGQG 397
QR + + N I+ K G ++ + +F ++ K D++ +N+MI GF G
Sbjct: 497 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLK 556
Query: 398 EKALELFSSMVHEGFEPDKYT 418
E+A LF M +G PD T
Sbjct: 557 EEADALFRKMREDGPLPDSGT 577
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 178/404 (44%), Gaps = 30/404 (7%)
Query: 171 IDGAMRLFSAMEERDAV----TWNSMIGGLVRGGDLDGAFKLFDEMPE----RDMVSWNT 222
+D A+ LF M + + +N ++ + + D L ++M ++ ++N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 223 MLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPE-- 276
+++ + + +++ A L +M++ +I++ S+++ GY + A L D+ E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 277 --KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGK 334
+ + +TT+I G EA L D+M + G +P+ ++ + G + L
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 335 KIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGF 391
+ ++ + + + + ID K D A +F++M K ++++++S+I
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 392 GVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQ 451
+ + A L S M+ P+ TF L+ A G + + ++ M K I P
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK-RSIDPD 364
Query: 452 IEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLL-GAC---RMHNDVELAR 504
I Y +I+ L+EA FEL+ S PN + TL+ G C R+ VEL R
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 505 ALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAG 548
+S+ + + + ++ L + + QA D N V QM + G
Sbjct: 425 EMSQ---RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 172/353 (48%), Gaps = 26/353 (7%)
Query: 148 GFYEDIFVPNSLIDSYSRCGGV-GIDGAMRLFSAMEERDAVTWNSMIGGL-----VRGGD 201
G + + N++I++Y + G++G +++ ++D V +N + L V+ G
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM----KKDGVVYNKVTYTLLMELSVKNGK 309
Query: 202 LDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----ISWST 253
+ A KLFDEM ER D+ + +++ + G M +AF LFD + + + ++
Sbjct: 310 MSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGA 369
Query: 254 MVCGYSRAGDMDMARMLFDKCPEKNL----VLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
++ G + G+M A +L ++ K + V++ T+I GY KG + EA+++YD ME+ G
Sbjct: 370 LIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
+ D +I + K+ + + ST ID+Y K G ++ A
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 370 GIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCAC 426
+F +M+ K + +++N MI+ + G+ ++A +L ++M G +PD YT+ L+
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 427 THAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP 479
A VD+ F+ M + G+ Y MI LS+ G +EAF L M
Sbjct: 550 CIADNVDEAMRLFSEM-GLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 201/449 (44%), Gaps = 36/449 (8%)
Query: 6 GVRIPTWFSPRRL-LEEKLCTL-----HRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIA 59
G+R+ + + L ++E+ C + + +DL +I +++ + + +Y I
Sbjct: 173 GLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLT--IV 230
Query: 60 AFSLCR--HISSAVNVFNQVPY----PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREG 113
LCR + + + + P + YN++I A+ + M+++G
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE-GVLKVMKKDG 289
Query: 114 VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDG 173
V + TY L++ + + + + + G D+ V SLI R G +
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG--NMKR 347
Query: 174 AMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDM----VSWNTMLD 225
A LF + E+ + T+ ++I G+ + G++ A L +EM + + V +NT++D
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLID 407
Query: 226 GYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL 281
GY + G +++A ++D M Q ++ + +T+ ++R D A+ + E + L
Sbjct: 408 GYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKL 467
Query: 282 ----WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIH 337
+T +I Y ++G ++EA L+ +M G++P+ ++ A + G + +K+
Sbjct: 468 STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLR 527
Query: 338 ASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVH 394
A+++ + + I +D A +FS+M K ++ V++ MI G
Sbjct: 528 ANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKA 587
Query: 395 GQGEKALELFSSMVHEGFEPDKYTFIGLL 423
G+ ++A L+ M +G+ D + L+
Sbjct: 588 GKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 171/376 (45%), Gaps = 20/376 (5%)
Query: 192 MIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQ-- 245
++ GL R G+++ + KL E + + ++NT+++ Y K + + + M +
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 246 --WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISGYAEKGFMKEAT 299
+N ++++ ++ + G M A LFD+ E+ + ++T++IS KG MK A
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAF 349
Query: 300 VLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMY 359
+L+D++ E GL P +++ + G +G + + +Q + V N ID Y
Sbjct: 350 LLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGY 409
Query: 360 AKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDK 416
+ G +D A I+ M K D+ + N++ F + ++A + M+ G +
Sbjct: 410 CRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLST 469
Query: 417 YTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLR 476
++ L+ G V++ + F M G+ P Y MI + G ++EA +L
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSS-KGVQPNAITYNVMIYAYCKQGKIKEARKLRA 528
Query: 477 SMP---VEPNAIVVGTLL-GACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAG 532
+M ++P++ +L+ G C N E R SE K + + ++++ + ++AG
Sbjct: 529 NMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAG 588
Query: 533 DWMNVASVRLQMKNAG 548
+ +MK G
Sbjct: 589 KSDEAFGLYDEMKRKG 604
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 206/482 (42%), Gaps = 34/482 (7%)
Query: 23 LCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP---- 78
L + RC N D + QI ++ A + +++ + +V +
Sbjct: 105 LLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKF 164
Query: 79 YPNVHLYNSLIRA-HALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
P Y +LI A A+N H + + F MQ G P + L++ +
Sbjct: 165 RPAFSAYTTLIGAFSAVN--HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSA 222
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMI 193
+ ++ DI + N IDS+ + G V D A + F +E D VT+ SMI
Sbjct: 223 LSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV--DMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 194 GGLVRGGDLDGAFKLFDEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDRMLQW--- 246
G L + LD A ++F+ + + V ++NTM+ GY AG+ ++A+ L +R
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 247 -NIISWSTMVCGYSRAGDMDMARMLFDKCPEK---NLVLWTTIISGYAEKGFMKEATVLY 302
++I+++ ++ + G +D A +F++ + NL + +I G + A L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 303 DKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTK---VLNAFIDMY 359
D M++AGL P+ + ++ +S L + A + ++ T + ID
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKL---DEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 360 AKCGCLDAAFGIFSKMTG---KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDK 416
K G +D A+ ++ KM + + + + S+I F HG+ E +++ M+++ PD
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 417 YTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLR 476
+ AG +KGR F + K VP Y +I L + G E +EL
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEI-KARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 477 SM 478
SM
Sbjct: 577 SM 578
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 200/450 (44%), Gaps = 29/450 (6%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P+V YN ++ G F M+++ P+ TY L+ L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDE-ALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFE 398
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGG 195
+ ++K G + ++ N ++D C +D A +F M+ + D +T+ S+I G
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRL--CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDG 456
Query: 196 LVRGGDLDGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRMLQWNI--- 248
L + G +D A+K++++M + D + + +++ + G +++ M+ N
Sbjct: 457 LGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Query: 249 --ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISGYAEKGFMKEATVLY 302
+ + M C + +AG+ + R +F++ + V ++ +I G + GF E L+
Sbjct: 517 LQLLNTYMDCMF-KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF 575
Query: 303 DKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKC 362
M+E G D ++ + G + ++ ++ F + + ID AK
Sbjct: 576 YSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 363 GCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTF 419
LD A+ +F + K+ ++V ++S+I GFG G+ ++A + ++ +G P+ YT+
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 420 IGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP 479
LL A A +++ F SM+++ P YG +I+ L + +AF + M
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKEL-KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 480 ---VEPNAIVVGTLLGACRMHNDVELARAL 506
++P+ I T++ ++ A AL
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/503 (20%), Positives = 207/503 (41%), Gaps = 70/503 (13%)
Query: 13 FSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVN 72
S +L + LC R LD ++ + KA L ++ ++ + + A
Sbjct: 377 LSTYNILIDMLC---RAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 73 VFNQVPY----PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKAC 128
+F ++ Y P+ + SLI G + + M ++ Y L+K
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD-AYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 129 TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER---- 184
I+ + D+ + N+ +D + G AM F ++ R
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAM--FEEIKARRFVP 550
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELF 240
DA +++ +I GL++ G + ++LF M E+ D ++N ++DG+ K G++NKA++L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 241 DRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEK 292
+ M + ++++ +++ G ++ +D A MLF++ K N+V+++++I G+ +
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Query: 293 GFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL 352
G + EA ++ +++ + GL P+
Sbjct: 671 GRIDEAYLILEELMQKGLTPN-----------------------------------LYTW 695
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
N+ +D K ++ A F M K + V++ +I+G + KA + M
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLE 469
+G +P ++ ++ AG + + F+ K G VP Y MI+ LS G
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRF-KANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 470 EAFELL-----RSMPVEPNAIVV 487
+AF L R +P+ VV
Sbjct: 815 DAFSLFEETRRRGLPIHNKTCVV 837
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 137/317 (43%), Gaps = 21/317 (6%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P+ Y+ LI + + T+ F+ M+ +G D Y ++ +
Sbjct: 550 PDARSYSILIHG-LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME----ERDAVTWNSMIGG 195
+ ++ GF + S+ID ++ +D A LF + E + V ++S+I G
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDR--LDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 196 LVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----N 247
+ G +D A+ + +E+ ++ ++ +WN++LD KA E+N+A F M + N
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEKNL----VLWTTIISGYAEKGFMKEATVLYD 303
+++ ++ G + + A + + + ++ + + +TT+ISG A+ G + EA L+D
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 304 KMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
+ + G PD +++ + + +R K +D K
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846
Query: 364 CLDAA--FGIFSKMTGK 378
CL+ A G + TGK
Sbjct: 847 CLEQAAIVGAVLRETGK 863
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/446 (26%), Positives = 187/446 (41%), Gaps = 95/446 (21%)
Query: 109 MQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGG 168
M R+G PD L+K ++P + +EKFG D+F N+LI+ + C
Sbjct: 115 MVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGF--CKM 171
Query: 169 VGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDL---------------------- 202
ID A R+ M + D VT+N MIG L G L
Sbjct: 172 NRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITY 231
Query: 203 -------------DGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM-- 243
D A KL DEM R DM ++NT++ G K G +++AFE+ +
Sbjct: 232 TILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLEL 291
Query: 244 -------LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
+ +NI+ + + G G+ M +M +KC + N+V ++ +I+ G ++
Sbjct: 292 KGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC-DPNVVTYSILITTLCRDGKIE 350
Query: 297 EATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFI 356
EA L M+E GL PD ++ A G L + + F+
Sbjct: 351 EAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE-------------------FL 391
Query: 357 DMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDK 416
+ GCL D+V++N+++ +G+ ++ALE+F + G P+
Sbjct: 392 ETMISDGCL-------------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNS 438
Query: 417 YTFIGLLCACTHAGLVDKGRNYFNSMEKVY-GIVPQIEHYGCMIDLLSRGGHLEEAFELL 475
++ + A +G DK R +E + GI P Y MI L R G ++EAFELL
Sbjct: 439 SSYNTMFSALWSSG--DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Query: 476 ---RSMPVEPNAIVVG-TLLGACRMH 497
RS P+ + LLG C+ H
Sbjct: 497 VDMRSCEFHPSVVTYNIVLLGFCKAH 522
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 207/457 (45%), Gaps = 33/457 (7%)
Query: 67 ISSAVNVFNQV----PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYP 122
+ AV++F + P+P++ +N L+ A A + L S MQ G+ D +TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVA-KMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 123 FLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
+ S L L + A + K G+ DI +SL++ Y C I A+ L M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGY--CHSKRISDAVALVDQMV 180
Query: 183 ER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMN 234
E D T+ ++I GL A L D+M +R D+V++ T+++G K G+++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 235 KAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTII 286
A L ++M ++ N++ ++T++ + +++A LF + K N+V + ++I
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 287 SGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFR 346
+ G +A+ L M E + P+ +++ A + G L +K+H + +
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 347 CSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALEL 403
T N I+ + LD A +F M K ++ ++N++I+GF + E +EL
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 404 FSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP-QIEHYGCMIDLL 462
F M G + T+ ++ AG D + F M V VP I Y ++ L
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM--VSNRVPTDIMTYSILLHGL 478
Query: 463 SRGGHLEEA---FELLRSMPVEPNAIVVGTLL-GACR 495
G L+ A F+ L+ +E N + T++ G C+
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 193/453 (42%), Gaps = 58/453 (12%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNVH 83
R S L L + A+++K D+ L+ + + IS AV + +Q+ P+
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+ +LI L+ + S + M + G PD TY ++ + L +
Sbjct: 190 TFTTLIHGLFLH-NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNK 248
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRG 199
+E ++ + N++IDS C ++ A+ LF+ ME + + VT+NS+I L
Sbjct: 249 MEAARIKANVVIFNTIIDSL--CKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNY 306
Query: 200 GDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----ISW 251
G A +L M E+ ++V++N ++D + K G++ +A +L + M+Q +I I++
Sbjct: 307 GRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 252 STMVCGYSRAGDMDMARMLFD----------------------KCPE------------- 276
+ ++ G+ +D A+ +F KC
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ 426
Query: 277 ----KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGL 332
N V +TTII G+ + G A +++ +M + D +L G L
Sbjct: 427 RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDT 486
Query: 333 GKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFG 392
I +Q+ + + N I+ K G + A+ +F ++ K D+V++N+MI G
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLC 546
Query: 393 VHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA 425
++A +LF M +G P+ T+ L+ A
Sbjct: 547 SKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 151/340 (44%), Gaps = 37/340 (10%)
Query: 202 LDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWST 253
+D A LF +M P +V +N +L AK + L ++M + ++ ++S
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 254 MVCGYSRAGDMDMARMLFDKCP----EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
+ + R + +A + K E ++V +++++GY + +A L D+M E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASV----QRCRFRCSTKVLN--AFIDMYAKCG 363
KPD +++ L L K +V Q + C ++ ++ K G
Sbjct: 184 YKPDTFTFTTLIHG------LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 364 CLDAAFGIFSKMTG---KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFI 420
+D A + +KM K ++V +N++I + E A++LF+ M +G P+ T+
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 421 GLL-CACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM- 478
L+ C C + D R N +EK I P + + +ID + G L EA +L M
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEK--KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 479 --PVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPS 516
++P+ I L+ MHN ++ A+ +FK + S
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAK----QMFKFMVS 391
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 119/290 (41%), Gaps = 14/290 (4%)
Query: 262 GDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISIL 321
GDM +R P ++V + ++S A+ + L ++M+ G+ D +
Sbjct: 72 GDMVKSR------PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 322 TACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG---K 378
L L + A + + + L++ ++ Y + A + +M K
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 379 KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNY 438
D ++ ++IHG +H + +A+ L MV G +PD T+ ++ G +D N
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGA-C 494
N ME I + + +ID L + H+E A +L M + PN + +L+ C
Sbjct: 246 LNKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 495 RMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQM 544
+ +R LS L K + + F+ L + + + G + + +M
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 93/223 (41%), Gaps = 12/223 (5%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYP----NVHLY 85
+ LD KQ+ ++ ++ LI F C+ + V +F ++ N Y
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
++I+ G S F M V D TY LL L +I +++
Sbjct: 437 TTIIQGFFQAGDCDSAQM-VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER-DAVTWNSMIGGLVRGGDLDG 204
K +IF+ N++I+ + G VG A LF ++ + D VT+N+MI GL L
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVG--EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQE 553
Query: 205 AFKLFDEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDRM 243
A LF +M E + ++NT++ + + + EL M
Sbjct: 554 ADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/536 (22%), Positives = 231/536 (43%), Gaps = 68/536 (12%)
Query: 46 HLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVHLYNSLIRAHALNGSHPSL 101
H+ + +YV + + + AVNVF ++ + P V YN+++ +G
Sbjct: 73 HMLEGVYVGA--MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ- 129
Query: 102 TFSTFFHMQREGVYPDNFTYPFLLKACTGPS----SLPLV-----QMIHAHVEKF----- 147
+ M+ G+ PD +++ +K+ S +L L+ Q +V +
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 148 GFYEDIFVPNSL--------------IDSYSR-----CGGVGIDGAMRLFSAMEERDAV- 187
GFYE+ F + ++++ C + +L + +R +
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP 249
Query: 188 ---TWNSMIGGLVRGGDLDGAFK----LFDEMPERDMVSWNTMLDGYAKAGEMNKAFELF 240
T+N I GL + G+LDGA + L ++ P+ D++++N ++ G K + +A
Sbjct: 250 NLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYL 309
Query: 241 DRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISGYAEK 292
+M L+ + +++T++ GY + G + +A + V + ++I G +
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 293 GFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL 352
G A L+++ G+KP+ + +++ + GM+ ++ + +
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
N ++ K GC+ A G+ M K D+ ++N +IHG+ + E ALE+ M+
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLD 489
Query: 410 EGFEPDKYTFIGLLCA-CTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHL 468
G +PD YT+ LL C + D Y +EK G P + + +++ L R L
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK--GCAPNLFTFNILLESLCRYRKL 547
Query: 469 EEAFELLRSMP---VEPNAIVVGTLLGACRMHNDVELARAL---SEHLFKLVPSDP 518
+EA LL M V P+A+ GTL+ + D++ A L E +K+ S P
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTP 603
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 177/426 (41%), Gaps = 24/426 (5%)
Query: 73 VFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPS 132
+ Q P P+V YN+LI N M EG+ PD++TY L+
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY-LGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 133 SLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVT 188
+ L + I GF D F SLID G + A+ LF+ + + +
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET--NRALALFNEALGKGIKPNVIL 393
Query: 189 WNSMIGGLVRGGDLDGAFKLFDEMPERDMV----SWNTMLDGYAKAGEMNKAFELFDRML 244
+N++I GL G + A +L +EM E+ ++ ++N +++G K G ++ A L M+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 245 QW----NIISWSTMVCGYSRAGDMDMA----RMLFDKCPEKNLVLWTTIISGYAEKGFMK 296
+I +++ ++ GYS M+ A ++ D + ++ + ++++G + +
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 297 EATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFI 356
+ Y M E G P+ +L + L + ++ I
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 357 DMYAKCGCLDAAFGIFSKMTGKKDLVS----WNSMIHGFGVHGQGEKALELFSSMVHEGF 412
D + K G LD A+ +F KM + S +N +IH F A +LF MV
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 413 EPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAF 472
PD YT+ ++ G V+ G + M + G +P + G +I+ L + EA
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME-NGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 473 ELLRSM 478
++ M
Sbjct: 693 GIIHRM 698
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 188/476 (39%), Gaps = 67/476 (14%)
Query: 59 AAFSLCRHISSAVNVFNQVPYPNV--HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYP 116
AA L ++SS N V Y V Y +A + F M GV
Sbjct: 164 AALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG---------YELFGKMLASGVSL 214
Query: 117 DNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMR 176
T+ LL+ + + + V K G ++F N I + G +DGA+R
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE--LDGAVR 272
Query: 177 LFSAMEER----DAVTWNSMIGGLVRGGDLDGAF----KLFDEMPERDMVSWNTMLDGYA 228
+ + E+ D +T+N++I GL + A K+ +E E D ++NT++ GY
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 229 KAGEMNKAFELF-DRMLQWNI---ISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLV 280
K G + A + D + + ++ +++ G G+ + A LF++ K N++
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVI 392
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD--------------------DGVLISI 320
L+ T+I G + +G + EA L ++M E GL P+ DG++ +
Sbjct: 393 LYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Query: 321 LTACAESGMLGLGKKIHASVQRCRFRCSTKVL---------------NAFIDMYAKCGCL 365
++ + IH + + + ++L N+ ++ K
Sbjct: 453 ISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKF 512
Query: 366 DAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGL 422
+ + M K +L ++N ++ + + ++AL L M ++ PD TF L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 423 LCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
+ G +D F ME+ Y + Y +I + ++ A +L + M
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 161/396 (40%), Gaps = 61/396 (15%)
Query: 160 IDSYSRCGGVGIDGAMRLFSAME----ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
+ +Y R G V A+ +F M+ E ++N+++ LV G D A K++ M +R
Sbjct: 83 MKNYGRKGKV--QEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 216 ----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLF 271
D+ S+ + + K + A L + M S+ C
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNM--------SSQGC--------------- 177
Query: 272 DKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLG 331
E N+V + T++ G+ E+ F E L+ KM +G+ +L + G +
Sbjct: 178 ----EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVK 233
Query: 332 LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF---GIFSKMTGKKDLVSWNSMI 388
+K+ V + + N FI + G LD A G + K D++++N++I
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI 293
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVD-----KGRNYFNSME 443
+G + + ++A MV+EG EPD YT+ L+ G+V G FN
Sbjct: 294 YGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN--- 350
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIVVGTLLGACRMHNDV 500
G VP Y +ID L G A L ++PN I+ TL+ +
Sbjct: 351 ---GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 501 ----ELARALSEHLFKLVPSDPGNFSLLSNIYAQAG 532
+LA +SE L+P + F++L N + G
Sbjct: 408 LEAAQLANEMSEK--GLIP-EVQTFNILVNGLCKMG 440
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 20/252 (7%)
Query: 79 YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQ 138
+P++ +N LI ++ + M GV PD +TY LL S V
Sbjct: 458 FPDIFTFNILIHGYSTQLKMEN-ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIG 194
+ + + G ++F N L++S C +D A+ L M+ + DAVT+ ++I
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESL--CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 195 GLVRGGDLDGAFKLFDEMPERDMVS-----WNTMLDGYAKAGEMNKAFELF----DRMLQ 245
G + GDLDGA+ LF +M E VS +N ++ + + + A +LF DR L
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Query: 246 WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTT----IISGYAEKGFMKEATVL 301
+ ++ MV G+ + G++++ + E + T +I+ + + EA +
Sbjct: 635 PDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694
Query: 302 YDKMEEAGLKPD 313
+M + GL P+
Sbjct: 695 IHRMVQKGLVPE 706
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 200/451 (44%), Gaps = 30/451 (6%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P+V +N LI GS ++ M++ G P TY +L
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSY-LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 289
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGG 195
+ H++ G D+ N LI + C I L M +R + VT+N++I G
Sbjct: 290 LLDHMKSKGVDADVCTYNMLI--HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347
Query: 196 LVRGGDLDGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRM----LQWN 247
G + A +L +EM + V++N ++DG+ G +A ++F M L +
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 407
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPEKNL----VLWTTIISGYAEKGFMKEATVLYD 303
+S+ ++ G + + D+AR + + + + +T +I G + GF+ EA VL +
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467
Query: 304 KMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
+M + G+ PD +++ + G K+I + R + + + I + G
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527
Query: 364 CLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFI 420
CL A I+ M + +D ++N ++ G+ +A E M +G P+ +F
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587
Query: 421 GLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM-- 478
L+ ++G K + F+ M KV G P YG ++ L +GGHL EA + L+S+
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKV-GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHA 646
Query: 479 -PVEPNAIVVGTLLGA-CRMHNDVELARALS 507
P + ++ TLL A C+ N LA+A+S
Sbjct: 647 VPAAVDTVMYNTLLTAMCKSGN---LAKAVS 674
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 196/491 (39%), Gaps = 59/491 (12%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
PN ++ LI + N FS F M + G +P FTY LLK L +
Sbjct: 581 PNTVSFDCLINGYG-NSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEK 639
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGG 195
+ D + N+L+ + + G + A+ LF M +R D+ T+ S+I G
Sbjct: 640 FLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA--KAVSLFGEMVQRSILPDSYTYTSLISG 697
Query: 196 LVRGGDLDGAFKLFDEMPER-----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW---- 246
L R G A E R + V + +DG KAG+ ++M
Sbjct: 698 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757
Query: 247 NIISWSTMVCGYSRAGDMDMARMLFDKCPEKN----LVLWTTIISGYAEKGFMKEATVLY 302
+I++ + M+ GYSR G ++ L + +N L + ++ GY+++ + + +LY
Sbjct: 758 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 303 DKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKC 362
+ G+ PD S++ ES ML +G KI L AFI C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKI---------------LKAFI-----C 857
Query: 363 GCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGL 422
++ D ++N +I +G+ A +L M G DK T +
Sbjct: 858 RGVEV------------DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAM 905
Query: 423 LCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM---P 479
+ + R + M K GI P+ Y +I+ L R G ++ AF + M
Sbjct: 906 VSVLNRNHRFQESRMVLHEMSK-QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHK 964
Query: 480 VEPNAIVVGTLLGACRMHNDVELARALSEHLF--KLVPSDPGNFSLLSNIYAQAGDWMNV 537
+ P + ++ A + A L + KLVP+ +F+ L ++ + G+ +
Sbjct: 965 ICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT-IASFTTLMHLCCKNGNVIEA 1023
Query: 538 ASVRLQMKNAG 548
+R+ M N G
Sbjct: 1024 LELRVVMSNCG 1034
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 105/485 (21%), Positives = 193/485 (39%), Gaps = 33/485 (6%)
Query: 44 KAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVHLYNSLIRAHALNGSHP 99
K +H + LI FS + A + N++ PN +N+LI H G+
Sbjct: 331 KRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFK 390
Query: 100 SLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSL 159
F+ M+ +G+ P +Y LL + L + + +++ G +
Sbjct: 391 E-ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449
Query: 160 IDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER 215
ID + G +D A+ L + M + D VT++++I G + G A ++ +
Sbjct: 450 IDGLCKNGF--LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRV 507
Query: 216 DM----VSWNTMLDGYAKAGEMNKAFELFDRML----QWNIISWSTMVCGYSRAGDMDMA 267
+ + ++T++ + G + +A +++ M+ + +++ +V +AG + A
Sbjct: 508 GLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 268 RMLFDKCPEKNLVLWTTI-----ISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILT 322
F +C + +L T+ I+GY G +A ++D+M + G P S+L
Sbjct: 568 EE-FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLK 626
Query: 323 ACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK--- 379
+ G L +K S+ T + N + K G L A +F +M +
Sbjct: 627 GLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILP 686
Query: 380 DLVSWNSMIHGFGVHGQGEKALELFSSMVHEG-FEPDKYTFIGLLCACTHAGLVDKGRNY 438
D ++ S+I G G+ A+ G P+K + + AG G +
Sbjct: 687 DSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYF 746
Query: 439 FNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE---PNAIVVGTLLGACR 495
M+ + G P I MID SR G +E+ +LL M + PN LL
Sbjct: 747 REQMDNL-GHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 496 MHNDV 500
DV
Sbjct: 806 KRKDV 810
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 226/497 (45%), Gaps = 32/497 (6%)
Query: 78 PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
P+P++ ++ L+ A A + L S MQ G+ + +TY + S L L
Sbjct: 71 PFPSIVEFSKLLSAIA-KMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLA 129
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMI 193
I + K G+ I NSL++ + C G I A+ L M E D VT+ +++
Sbjct: 130 LAILGKMMKLGYGPSIVTLNSLLNGF--CHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 194 GGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQ 245
GL + A L + M + D+V++ +++G K GE + A L ++M ++
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 246 WNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVL 301
+++ ++T++ G + MD A LF+K K ++ + +IS G +A+ L
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 302 YDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL--NAFIDMY 359
M E + PD +++ A + G L +K++ + + + C V+ N I +
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK-HCFPDVVAYNTLIKGF 366
Query: 360 AKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDK 416
K ++ +F +M+ + + V++ ++IHGF + A +F MV +G PD
Sbjct: 367 CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI 426
Query: 417 YTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLR 476
T+ LL + G V+ F M+K + I Y MI+ L + G +E+ ++L
Sbjct: 427 MTYNILLDGLCNNGNVETALVVFEYMQK-RDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 477 SMP---VEPNAIVVGTLL-GACRMHNDVELARALSEHLFKLVP-SDPGNFSLLSNIYAQA 531
S+ V+PN + T++ G CR E A AL + + P + G ++ L +
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCR-KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRD 544
Query: 532 GDWMNVASVRLQMKNAG 548
GD A + +M++ G
Sbjct: 545 GDEAASAELIKEMRSCG 561
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 162/360 (45%), Gaps = 29/360 (8%)
Query: 33 DLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVHLYNSL 88
DL + ++ K + D+ + +I +H+ A ++FN++ P+V YN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 89 IRAHALNG--SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEK 146
I G S S S M + + PD + L+ A L + ++ + K
Sbjct: 292 ISCLCNYGRWSDASRLLS---DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 147 FGF-YEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGD 201
+ D+ N+LI + C ++ M +F M +R + VT+ ++I G + D
Sbjct: 349 SKHCFPDVVAYNTLIKGF--CKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARD 406
Query: 202 LDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWST 253
D A +F +M D++++N +LDG G + A +F+ M ++ +I++++T
Sbjct: 407 CDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTT 466
Query: 254 MVCGYSRAGDMDMARMLFD----KCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
M+ +AG ++ LF K + N+V +TT++SG+ KG +EA L+ +M+E G
Sbjct: 467 MIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDG 526
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
P+ G +++ A G ++ ++ C F +M G LD +F
Sbjct: 527 PLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD-GRLDKSF 585
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 157/369 (42%), Gaps = 26/369 (7%)
Query: 171 IDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPE----RDMVSWNT 222
+D A+ LF M + V ++ ++ + + D L ++M ++ +++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 223 MLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPE-- 276
++ + + +++ A + +M++ +I++ ++++ G+ + A L D+ E
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 277 --KNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGK 334
+ V +TT++ G + EA L ++M G +PD +++ + G L
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 335 KIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG---KKDLVSWNSMIHGF 391
+ +++ + + N ID K +D AF +F+KM K D+ ++N +I
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 392 GVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQ 451
+G+ A L S M+ + PD F L+ A G + + ++ M K P
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 452 IEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGACRMHNDVELARALSE 508
+ Y +I + +EE E+ R M + N + TL+ D + A +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA----Q 411
Query: 509 HLFKLVPSD 517
+FK + SD
Sbjct: 412 MVFKQMVSD 420
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 116/509 (22%), Positives = 225/509 (44%), Gaps = 65/509 (12%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQV----PYPNVH 83
R S L L + +++K ++ L+ + + IS AV + +Q+ PN
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAH 143
+N+LI L+ + S + M +G PD TY ++ L +
Sbjct: 188 TFNTLIHGLFLH-NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 144 VEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRG 199
+E+ + + N++ID C +D A+ LF ME + + VT++S+I L
Sbjct: 247 MEQGKLEPGVLIYNTIIDGL--CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 200 GDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNI----ISW 251
G A +L +M ER D+ +++ ++D + K G++ +A +L+D M++ +I +++
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
S+++ G+ +D A+ +F+ K ++V + T+I G+ + Y ++EE
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK----------YKRVEE 414
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDA 367
+ + ++ G++G +T N I + G D
Sbjct: 415 G---------MEVFREMSQRGLVG----------------NTVTYNILIQGLFQAGDCDM 449
Query: 368 AFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC 424
A IF +M +++++N+++ G +G+ EKA+ +F + EP YT+ ++
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 425 ACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE--- 481
AG V+ G + F ++ + G+ P + Y MI R G EEA L + M +
Sbjct: 510 GMCKAGKVEDGWDLFCNLS-LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 482 PNAIVVGTLLGACRMHNDVELARALSEHL 510
PN+ TL+ A D E + L + +
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 206/462 (44%), Gaps = 49/462 (10%)
Query: 67 ISSAVNVFNQV----PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYP 122
+ AV +F ++ P+P++ ++ L+ A A + + S MQ G+ +++TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIA-KMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 123 FLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
L+ S LPL + + K G+ +I +SL++ Y C I A+ L M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGY--CHSKRISEAVALVDQM- 177
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDR 242
F + + V++NT++ G + ++A L DR
Sbjct: 178 --------------------------FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 243 ML----QWNIISWSTMVCGYSRAGDMDMARMLFDKCP----EKNLVLWTTIISGYAEKGF 294
M+ Q +++++ +V G + GD D+A L +K E ++++ TII G +
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 295 MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNA 354
M +A L+ +ME G++P+ S+++ G ++ + + + +A
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 355 FIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
ID + K G L A ++ +M + +V+++S+I+GF +H + ++A ++F MV +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
PD T+ L+ V++G F M + G+V Y +I L + G + A
Sbjct: 392 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ-RGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 472 FELLRSMP---VEPNAIVVGTLLGACRMHNDVELARALSEHL 510
E+ + M V PN + TLL + +E A + E+L
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 170/396 (42%), Gaps = 63/396 (15%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVHLYN 86
+ DL + ++ + L + + +I +H+ A+N+F ++ PNV Y+
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 87 SLIRAHALNG--SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
SLI G S S S M + PD FT+ L+ A L + ++ +
Sbjct: 296 SLISCLCNYGRWSDASRLLS---DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 145 EK-----------------------------FGF------YEDIFVPNSLIDSYSRCGGV 169
K F F + D+ N+LI + C
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF--CKYK 410
Query: 170 GIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWN 221
++ M +F M +R + VT+N +I GL + GD D A ++F EM +++++N
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 222 TMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK 277
T+LDG K G++ KA +F+ + ++ I +++ M+ G +AG ++ LF K
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 278 ----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
++V + T+ISG+ KG +EA L+ +M+E G P+ G +++ A G
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
++ ++ C F + +M G LD +F
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDKSF 625
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 126/278 (45%), Gaps = 10/278 (3%)
Query: 275 PEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTAC-AESGMLGLG 333
P +++ ++ ++S A+ L ++M+ G+ P + SIL C L L
Sbjct: 77 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI-PHNHYTYSILINCFCRRSQLPLA 135
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM--TG-KKDLVSWNSMIHG 390
+ + + + + L++ ++ Y + A + +M TG + + V++N++IHG
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 391 FGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP 450
+H + +A+ L MV +G +PD T+ ++ G D N N ME+ + P
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ-GKLEP 254
Query: 451 QIEHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLLGA-CRMHNDVELARAL 506
+ Y +ID L + H+++A L + M + PN + +L+ C + +R L
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 507 SEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQM 544
S+ + + + D FS L + + + G + + +M
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 186/420 (44%), Gaps = 23/420 (5%)
Query: 78 PYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
P P++ +N L+ A A + S MQR + +TY L+ S + L
Sbjct: 81 PLPSIVEFNKLLSAIA-KMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 139
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMI 193
+ + K G+ I +SL++ Y C G I A+ L M E D +T+ ++I
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGY--CHGKRISDAVALVDQMVEMGYRPDTITFTTLI 197
Query: 194 GGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQ 245
GL A L D M +R ++V++ +++G K G+ + A L ++M ++
Sbjct: 198 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE 257
Query: 246 WNIISWSTMV---CGYSRAGD-MDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVL 301
+++ ++T++ C Y D +++ + + K N+V ++++IS G +A+ L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 302 YDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAK 361
M E + P+ +++ A + G +K++ + + N+ ++ +
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCM 377
Query: 362 CGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYT 418
LD A +F M K D+V++N++I GF + E ELF M H G D T
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 419 FIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
+ L+ H G D + F M G+ P I Y ++D L G LE+A E+ M
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVS-DGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 170/394 (43%), Gaps = 59/394 (14%)
Query: 31 NLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVHLYN 86
+ DL + ++ A + D+ + +I + RH+ A+N+F ++ PNV Y+
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 87 SLIRAHALNGS----------------HPSL-TFSTFFH-----------------MQRE 112
SLI G +P+L TF+ M +
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 113 GVYPDNFTYPFLLKA-CTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGI 171
+ PD FTY L+ C QM V K F D+ N+LI + C +
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGF--CKSKRV 416
Query: 172 DGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTM 223
+ LF M R D VT+ ++I GL GD D A K+F +M D+++++ +
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 224 LDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFD----KCP 275
LDG G++ KA E+FD M ++ +I ++TM+ G +AG +D LF K
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 276 EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKK 335
+ N+V + T+ISG K ++EA L KM+E G P+ G +++ A G +
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 336 IHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAF 369
+ ++ CRF + +M G LD +F
Sbjct: 597 LIREMRSCRFVGDASTIGLVANMLHD-GRLDKSF 629
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/515 (22%), Positives = 208/515 (40%), Gaps = 100/515 (19%)
Query: 103 FSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDS 162
FS M +G PD TY +L S + L ++ +++ G D++ ++DS
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 163 YSRCGGVGIDGAMRLFSAMEE----RDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER--- 215
+ + G I+ A + F+ M E + VT+ ++I ++ + A +LF+ M
Sbjct: 528 FCKAGL--IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL 585
Query: 216 -DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKC 274
++V+++ ++DG+ KAG++ KA ++F+RM CG D+DM +D
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERM------------CGSKDVPDVDMYFKQYDDN 633
Query: 275 PEK-NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLG 333
E+ N+V + ++ G+ + ++EA L D M G +P+ V +++ + G L
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 334 KKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM------------------ 375
+++ + F + ++ ID Y K D A + SKM
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 753
Query: 376 ---TGKKD-----------------LVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
GK D +V++ +MI GFG+ G+ E LEL M +G P+
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Query: 416 KYTFIGLLCACTHAGLVDKGRNYFNSMEKVY----------------------------- 446
T+ L+ C G +D N M++ +
Sbjct: 814 YVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Query: 447 ---GIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIV-----VGTLLGACRMHN 498
P + Y +ID L + LE A LL + +V +L+ + + N
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 933
Query: 499 DVELARALSEHLFK--LVPSDPGNFSLLSNIYAQA 531
VE A L + K ++P SL+ ++ +
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/478 (22%), Positives = 204/478 (42%), Gaps = 84/478 (17%)
Query: 79 YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSS----- 133
YP+ ++NSL+ A+ +G H S + M + G P Y L+ + G
Sbjct: 369 YPSPKIFNSLVHAYCTSGDH-SYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427
Query: 134 -LPLVQMIHA------------HVEKF-------GFYEDI-----------FVPNSLIDS 162
L L + ++ +V F G YE F+P++ +
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDT--ST 485
Query: 163 YSR-----CGGVGIDGAMRLFSAMEE----RDAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
YS+ C ++ A LF M+ D T+ M+ + G ++ A K F+EM
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 214 E----RDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMD 265
E ++V++ ++ Y KA +++ A ELF+ ML NI+++S ++ G+ +AG ++
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 266 MARMLFDK-CPEK-------------------NLVLWTTIISGYAEKGFMKEATVLYDKM 305
A +F++ C K N+V + ++ G+ + ++EA L D M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 306 EEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCL 365
G +P+ V +++ + G L +++ + F + ++ ID Y K
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 366 DAAFGIFSKM---TGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGL 422
D A + SKM + ++V + MI G G+ ++A +L M +G +P+ T+ +
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 423 LCACTHAGLVDKGRNYFNSMEKV--YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
+ G++ K +E++ G+ P Y +ID + G L+ A LL M
Sbjct: 786 I---DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 196/468 (41%), Gaps = 77/468 (16%)
Query: 30 SNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNVHLY 85
S ++L + ++ + L D+Y ++ +F I A FN++ PNV Y
Sbjct: 497 SKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTY 556
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLL----------KACT------ 129
+LI A+ L S F M EG P+ TY L+ KAC
Sbjct: 557 TALIHAY-LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMC 615
Query: 130 GPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME----ERD 185
G +P V M + ++ +L+D + C ++ A +L AM E +
Sbjct: 616 GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF--CKSHRVEEARKLLDAMSMEGCEPN 673
Query: 186 AVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFD 241
+ ++++I GL + G LD A ++ EM E + ++++++D Y K + A ++
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 242 RMLQW----NIISWSTMVCGYSRAGDMDMA----RMLFDKCPEKNLVLWTTIISGYAEKG 293
+ML+ N++ ++ M+ G + G D A +M+ +K + N+V +T +I G+ G
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 294 FMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCST---- 349
++ L ++M G+ P+ ++ C ++G L + + +++ + T
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Query: 350 KVLNAF-----------------------------IDMYAKCGCLDAAFGIFSKM-TGKK 379
KV+ F ID K L+ A + ++ T
Sbjct: 854 KVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSA 913
Query: 380 DLV----SWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL 423
LV ++NS+I + + E A +LFS M +G P+ +F L+
Sbjct: 914 TLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/519 (21%), Positives = 209/519 (40%), Gaps = 58/519 (11%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLC-----RHISSAVNVFNQVPYPNV 82
+ LD IH ++ A+L D + A+SLC R + V N VP +
Sbjct: 247 KADRLDSASLIHREMSLANLRMDGFTLRCF--AYSLCKVGKWREALTLVETENFVP--DT 302
Query: 83 HLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
Y LI + S M+ P+ TY LL C L + +
Sbjct: 303 VFYTKLI-SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE----RDAVTWNSMIGGLVR 198
+ G Y + NSL+ +Y G A +L M + V +N +IG +
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSY--AYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 199 GGD------LDGAFKLFDEMPERDMVSWNTMLDGYAK----AGEMNKAFELFDRMLQWNI 248
D LD A K + EM +V + + + AG+ KAF + M+
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 249 I----SWSTMVCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISGYAEKGFMKEATV 300
I ++S ++ A M++A +LF++ LV +T ++ + + G +++A
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 301 LYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYA 360
+++M E G P+ +++ A ++ + ++ ++ + +A ID +
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 361 KCGCLDAAFGIFSKMTGKKD-------------------LVSWNSMIHGFGVHGQGEKAL 401
K G ++ A IF +M G KD +V++ +++ GF + E+A
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 402 ELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDL 461
+L +M EG EP++ + L+ G +D+ + M + +G + Y +ID
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE-HGFPATLYTYSSLIDR 718
Query: 462 LSRGGHLEEAFELLRSM---PVEPNAIVVGTLL-GACRM 496
+ + A ++L M PN ++ ++ G C++
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 149/386 (38%), Gaps = 40/386 (10%)
Query: 157 NSLIDSYSRCGGVGID----GAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
N L+ + R G I G ++ F R T+N +I ++ LD A +
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRS--TYNCLIQAFLKADRLDSA-----SL 256
Query: 213 PERDMVSWNTMLDGYA---------KAGEMNKAFELFD-RMLQWNIISWSTMVCGYSRAG 262
R+M N +DG+ K G+ +A L + + + ++ ++ G A
Sbjct: 257 IHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 316
Query: 263 DMDMA-----RMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVL 317
+ A RM C N+V ++T++ G K + + + M G P +
Sbjct: 317 LFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 318 ISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYA------KCGCLDAAFGI 371
S++ A SG K+ + +C V N I C LD A
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 372 FSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTH 428
+S+M + ++ +S G+ EKA + M+ +GF PD T+ +L +
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCN 495
Query: 429 AGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAI 485
A ++ F M++ G+V + Y M+D + G +E+A F +R + PN +
Sbjct: 496 ASKMELAFLLFEEMKR-GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 486 VVGTLLGACRMHNDVELARALSEHLF 511
L+ A V A L E +
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETML 580
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 206/473 (43%), Gaps = 65/473 (13%)
Query: 46 HLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVHLYNSLIRAHALNGSHPSL 101
H +DL+++ +I+ + AV +F ++ P+V +YN ++ L + +
Sbjct: 108 HCSEDLFIS--VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDT-LLGENRIQM 164
Query: 102 TFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLID 161
+ + M+R+G P+ FTY LLKA + + + + + G D ++I
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 162 SYSRCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DM 217
S VG+ R + E +N++I GL + D GAF+L EM E+ ++
Sbjct: 225 SMCE---VGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNV 281
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCG-YSRAGDMDMA----R 268
+S++T+++ +G++ AF +ML+ NI + S++V G + R D +
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ 341
Query: 269 MLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG 328
M+ + N+V + T++ G+ G + +A ++ MEE G P+
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN--------------- 386
Query: 329 MLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWN 385
+ + I+ +AK G LD A I++KM ++V +
Sbjct: 387 --------------------IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426
Query: 386 SMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV 445
+M+ H + ++A L M E P TF + AG +D F ME+
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486
Query: 446 YGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIVVGTLL-GAC 494
+ P I Y ++D L++ +EEA+ L R + VE ++ TLL G+C
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 156/340 (45%), Gaps = 36/340 (10%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP-----YPNVHLYN 86
++L Q+LK H ++Y L+ L A++++NQ+ PNV YN
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 87 SLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEK 146
+L++ +G+ S F HM+ G P+ TY L+ SL I +
Sbjct: 357 TLVQGFCSHGNIVK-AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLT 415
Query: 147 FGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAV----TWNSMIGGLVRGGDL 202
G ++ V +++++ C A L M + + T+N+ I GL G L
Sbjct: 416 SGCCPNVVVYTNMVEAL--CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRL 473
Query: 203 DGAFKLFDEMPER-----DMVSWNTMLDGYAKAGEMNKAF----ELFDRMLQWNIISWST 253
D A K+F +M ++ ++V++N +LDG AKA + +A+ E+F R ++W+ +++T
Sbjct: 474 DWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNT 533
Query: 254 MVCGYSRAGDMDMA-----RMLFD-KCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME- 306
++ G AG +A +M+ D K P++ + II Y ++G + A + D +
Sbjct: 534 LLHGSCNAGLPGIALQLVGKMMVDGKSPDE--ITMNMIILAYCKQGKAERAAQMLDLVSC 591
Query: 307 -EAGLKPDDGVLISIL-----TACAESGMLGLGKKIHASV 340
+PD +++ + C E G++ L + I A +
Sbjct: 592 GRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 195/436 (44%), Gaps = 34/436 (7%)
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKA-CTGPSSLPLVQMIHA 142
L SL+RA+ + F + +GV PD + + + A C G V++ +
Sbjct: 232 LLTSLVRANEFQKCCEA------FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF-S 284
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVR 198
+E+ G ++ N++ID CG D A M ER +T++ ++ GL R
Sbjct: 285 KMEEAGVAPNVVTFNTVIDGLGMCGRY--DEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 199 GGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIIS 250
+ A+ + EM ++ +++ +N ++D + +AG +NKA E+ D M L +
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 251 WSTMVCGYSRAGDMDMARMLFDKCP----EKNLVLWTTIISGYAEKGFMKEATVLYDKME 306
++T++ GY + G D A L + N +T++I A +M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 307 EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLD 366
+ P G+L ++++ + G ++ F T+ NA + + G LD
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 367 AAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL 423
AF I ++ G+ D VS+N++I G + ++A MV G +PD YT+ L+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 424 CACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPV 480
C + V++ +++ ++ G++P + Y MID + EE F+ + S V
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKR-NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 481 EPNAIVVGTLLGA-CR 495
+PN +V L+ A CR
Sbjct: 642 QPNTVVYNHLIRAYCR 657
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 215/526 (40%), Gaps = 76/526 (14%)
Query: 50 DLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNVHLYNSLIRAHALNGSHPSLTFST 105
D+Y+ I AF + AV +F+++ PNV +N++I + G + F
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE-AFMF 317
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
M G+ P TY L+K T + + + K GF ++ V N+LIDS+
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 166 CGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPE------- 214
G ++ A+ + M + + T+N++I G + G D A +L EM
Sbjct: 378 AGS--LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 215 ----------------------------RDMVS----WNTMLDGYAKAGEMNKAFELFDR 242
R+M T++ G K G+ +KA EL+ +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 243 MLQWNII----SWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL----WTTIISGYAEKGF 294
L + + + ++ G AG +D A + + + V+ + T+ISG K
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 295 MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA-----SVQRCRFRCST 349
+ EA + D+M + GLKPD+ SIL G+ + K A +R
Sbjct: 556 LDEAFMFLDEMVKRGLKPDN-YTYSILIC----GLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSS 406
+ ID K + F +M K + V +N +I + G+ ALEL
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 407 MVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGG 466
M H+G P+ T+ L+ + V++ + F M ++ G+ P + HY +ID + G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLG 729
Query: 467 HLEEAFELLRSM---PVEPNAIVVGTLLGA-CRMHNDVELARALSE 508
+ + LLR M V PN I ++G R N E +R L+E
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 135/301 (44%), Gaps = 17/301 (5%)
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELF 240
D T N+++ GL G LD AF++ E+ R D VS+NT++ G ++++AF
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 241 DRMLQWNI----ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISGYAEK 292
D M++ + ++S ++CG ++ A +D C ++ ++ +I G +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 293 GFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL 352
+E +D+M ++P+ V ++ A SG L + ++ ++ ++
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
+ I + ++ A +F +M + ++ + ++I G+G GQ K L M
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP-QIEHYGCMIDLLSRGGHL 468
+ P+K T+ ++ G V + N M + GIVP I + + L +GG L
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE-KGIVPDSITYKEFIYGYLKQGGVL 802
Query: 469 E 469
E
Sbjct: 803 E 803
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 25/276 (9%)
Query: 54 APKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREG 113
A KL AF + + I V ++V Y N+LI + F M + G
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSY------NTLI-SGCCGKKKLDEAFMFLDEMVKRG 570
Query: 114 VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDG 173
+ PDN+TY L+ + + ++ G D++ + +ID C +
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC--CKAERTEE 628
Query: 174 AMRLFSAMEERD----AVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLD 225
F M ++ V +N +I R G L A +L ++M + + ++ +++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 226 GYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL-- 279
G + + +A LF+ M L+ N+ ++ ++ GY + G M L + KN+
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 280 --VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
+ +T +I GYA G + EA+ L ++M E G+ PD
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 218 VSWNTMLDGYAKAGEMNKAFELFD---RMLQWNIISWSTMVCGYSRAGDMDMARMLFDKC 274
+ N +L +A E K E FD + + ++ ++T + + + G ++ A LF K
Sbjct: 227 TTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 275 PEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGML 330
E N+V + T+I G G EA + +KM E G++P ++ + +
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 331 GLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK-DLVS--WNSM 387
G + + + F + V N ID + + G L+ A I M K L S +N++
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 388 IHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC-ACTH 428
I G+ +GQ + A L M+ GF ++ +F ++C C+H
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 195/436 (44%), Gaps = 34/436 (7%)
Query: 84 LYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKA-CTGPSSLPLVQMIHA 142
L SL+RA+ + F + +GV PD + + + A C G V++ +
Sbjct: 232 LLTSLVRANEFQKCCEA------FDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLF-S 284
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVR 198
+E+ G ++ N++ID CG D A M ER +T++ ++ GL R
Sbjct: 285 KMEEAGVAPNVVTFNTVIDGLGMCGRY--DEAFMFKEKMVERGMEPTLITYSILVKGLTR 342
Query: 199 GGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIIS 250
+ A+ + EM ++ +++ +N ++D + +AG +NKA E+ D M L +
Sbjct: 343 AKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST 402
Query: 251 WSTMVCGYSRAGDMDMARMLFDKCP----EKNLVLWTTIISGYAEKGFMKEATVLYDKME 306
++T++ GY + G D A L + N +T++I A +M
Sbjct: 403 YNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 307 EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLD 366
+ P G+L ++++ + G ++ F T+ NA + + G LD
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 367 AAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL 423
AF I ++ G+ D VS+N++I G + ++A MV G +PD YT+ L+
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 424 CACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPV 480
C + V++ +++ ++ G++P + Y MID + EE F+ + S V
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKR-NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNV 641
Query: 481 EPNAIVVGTLLGA-CR 495
+PN +V L+ A CR
Sbjct: 642 QPNTVVYNHLIRAYCR 657
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 215/526 (40%), Gaps = 76/526 (14%)
Query: 50 DLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNVHLYNSLIRAHALNGSHPSLTFST 105
D+Y+ I AF + AV +F+++ PNV +N++I + G + F
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE-AFMF 317
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
M G+ P TY L+K T + + + K GF ++ V N+LIDS+
Sbjct: 318 KEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIE 377
Query: 166 CGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPE------- 214
G ++ A+ + M + + T+N++I G + G D A +L EM
Sbjct: 378 AGS--LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 215 ----------------------------RDMVS----WNTMLDGYAKAGEMNKAFELFDR 242
R+M T++ G K G+ +KA EL+ +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 243 MLQWNII----SWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL----WTTIISGYAEKGF 294
L + + + ++ G AG +D A + + + V+ + T+ISG K
Sbjct: 496 FLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKK 555
Query: 295 MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHA-----SVQRCRFRCST 349
+ EA + D+M + GLKPD+ SIL G+ + K A +R
Sbjct: 556 LDEAFMFLDEMVKRGLKPDN-YTYSILIC----GLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 350 KVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSS 406
+ ID K + F +M K + V +N +I + G+ ALEL
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED 670
Query: 407 MVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGG 466
M H+G P+ T+ L+ + V++ + F M ++ G+ P + HY +ID + G
Sbjct: 671 MKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDGYGKLG 729
Query: 467 HLEEAFELLRSM---PVEPNAIVVGTLLGA-CRMHNDVELARALSE 508
+ + LLR M V PN I ++G R N E +R L+E
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 135/301 (44%), Gaps = 17/301 (5%)
Query: 185 DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELF 240
D T N+++ GL G LD AF++ E+ R D VS+NT++ G ++++AF
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 241 DRMLQWNI----ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISGYAEK 292
D M++ + ++S ++CG ++ A +D C ++ ++ +I G +
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 293 GFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL 352
+E +D+M ++P+ V ++ A SG L + ++ ++ ++
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
+ I + ++ A +F +M + ++ + ++I G+G GQ K L M
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVP-QIEHYGCMIDLLSRGGHL 468
+ P+K T+ ++ G V + N M + GIVP I + + L +GG L
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE-KGIVPDSITYKEFIYGYLKQGGVL 802
Query: 469 E 469
E
Sbjct: 803 E 803
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 25/276 (9%)
Query: 54 APKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREG 113
A KL AF + + I V ++V Y N+LI + F M + G
Sbjct: 518 AGKLDEAFRIQKEILGRGCVMDRVSY------NTLI-SGCCGKKKLDEAFMFLDEMVKRG 570
Query: 114 VYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDG 173
+ PDN+TY L+ + + ++ G D++ + +ID C +
Sbjct: 571 LKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC--CKAERTEE 628
Query: 174 AMRLFSAMEERD----AVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLD 225
F M ++ V +N +I R G L A +L ++M + + ++ +++
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 226 GYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNL-- 279
G + + +A LF+ M L+ N+ ++ ++ GY + G M L + KN+
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 280 --VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPD 313
+ +T +I GYA G + EA+ L ++M E G+ PD
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 11/222 (4%)
Query: 218 VSWNTMLDGYAKAGEMNKAFELFD---RMLQWNIISWSTMVCGYSRAGDMDMARMLFDKC 274
+ N +L +A E K E FD + + ++ ++T + + + G ++ A LF K
Sbjct: 227 TTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKM 286
Query: 275 PEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGML 330
E N+V + T+I G G EA + +KM E G++P ++ + +
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 331 GLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK-DLVS--WNSM 387
G + + + F + V N ID + + G L+ A I M K L S +N++
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTL 406
Query: 388 IHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLC-ACTH 428
I G+ +GQ + A L M+ GF ++ +F ++C C+H
Sbjct: 407 IKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSH 448
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 124/239 (51%), Gaps = 5/239 (2%)
Query: 295 MKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNA 354
++EA + D +E+ G D L+ + C E L + +H C + +
Sbjct: 93 IREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHD----CITPLDARSYHT 148
Query: 355 FIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEP 414
I+MY+ C D A +F++M K++ +W +MI +G+GE+A+++F+ + EG +P
Sbjct: 149 VIEMYSGCRSTDDALNVFNEMP-KRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 415 DKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFEL 474
DK F + AC G +++G +F SM + YG+V +E Y +I++L+ GHL+EA +
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 475 LRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGD 533
+ M VEP+ + TL+ C + +EL +E + KL S S + A+A D
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESNAGLVAAKASD 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 4/162 (2%)
Query: 250 SWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAG 309
S+ T++ YS D A +F++ P++N W T+I A+ G + A ++ + E G
Sbjct: 145 SYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEG 204
Query: 310 LKPDDGVLISILTACAESGMLGLGKKIHASVQRCR-FRCSTKVLNAFIDMYAKCGCLDAA 368
KPD + ++ AC G + G S+ R S + I+M A CG LD A
Sbjct: 205 NKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEA 264
Query: 369 FGIFSKMTGKKDLVSWNSMIHGFGVHGQ---GEKALELFSSM 407
+MT + + W ++++ V G G++ EL +
Sbjct: 265 LDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKL 306
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 209/497 (42%), Gaps = 68/497 (13%)
Query: 9 IPTWFSPRRLLEEKLCTLHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHIS 68
+PT RL + + +LV + Q+ + +Y +I F CR +S
Sbjct: 85 LPTVIDFNRLFS----AIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLS 140
Query: 69 SAVNVFNQVPY----PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFL 124
A + ++ P+ ++N+L+ L S M G P T L
Sbjct: 141 YAFSTMGKIMKLGYEPDTVIFNTLLNGLCLE-CRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 125 LKA-CTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE 183
+ C V +I VE GF + +++ + G + AM L MEE
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVET-GFQPNEVTYGPVLNVMCKSGQTAL--AMELLRKMEE 256
Query: 184 R----DAVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNK 235
R DAV ++ +I GL + G LD AF LF+EM + D++++NT++ G+ AG +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 236 AFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIIS 287
+L M++ N++++S ++ + + G + A L + ++ N + + ++I
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 288 GYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRC 347
G+ ++ ++EA + D M G PD I+T
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCDPD------IMT------------------------- 405
Query: 348 STKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELF 404
N I+ Y K +D +F +M+ + + V++N+++ GF G+ E A +LF
Sbjct: 406 ----FNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 405 SSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSR 464
MV PD ++ LL G ++K F +EK + I Y +I +
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK-SKMELDIGIYMIIIHGMCN 520
Query: 465 GGHLEEAFELLRSMPVE 481
+++A++L S+P++
Sbjct: 521 ASKVDDAWDLFCSLPLK 537
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 188/441 (42%), Gaps = 32/441 (7%)
Query: 57 LIAAFSLCRHISSAVNVFNQVP----YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQRE 112
L+ L +S AV + +++ PN Y ++ +G +L M+
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSG-QTALAMELLRKMEER 257
Query: 113 GVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGID 172
+ D Y ++ SL + +E GF DI N+LI + C D
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF--CNAGRWD 315
Query: 173 GAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTML 224
+L M +R + VT++ +I V+ G L A +L EM +R + +++N+++
Sbjct: 316 DGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLI 375
Query: 225 DGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPEK--- 277
DG+ K + +A ++ D M+ +I++++ ++ GY +A +D LF + +
Sbjct: 376 DGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI 435
Query: 278 -NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKI 336
N V + T++ G+ + G ++ A L+ +M ++PD +L ++G L +I
Sbjct: 436 ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEI 495
Query: 337 HASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT---GKKDLVSWNSMIHGFGV 393
+++ + + I +D A+ +F + K D ++N MI
Sbjct: 496 FGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCR 555
Query: 394 HGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME--KVYGIVPQ 451
KA LF M EG PD+ T+ L+ A H G D +E K G
Sbjct: 556 KDSLSKADILFRKMTEEGHAPDELTYNILIRA--HLG-DDDATTAAELIEEMKSSGFPAD 612
Query: 452 IEHYGCMIDLLSRGGHLEEAF 472
+ +I++LS G L+++F
Sbjct: 613 VSTVKMVINMLS-SGELDKSF 632
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 156/359 (43%), Gaps = 45/359 (12%)
Query: 188 TWNSMIGGLVRGGDLDGAF----KLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM 243
T + MI R L AF K+ E D V +NT+L+G +++A EL DRM
Sbjct: 125 TLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 244 LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYD 303
++ G+ + L+ T+++G G + +A VL D
Sbjct: 185 VEM----------GH-----------------KPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 304 KMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
+M E G +P++ +L +SG L ++ ++ + + ID K G
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
Query: 364 CLDAAFGIFSKMT---GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFI 420
LD AF +F++M K D++++N++I GF G+ + +L M+ P+ TF
Sbjct: 278 SLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS 337
Query: 421 GLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFE---LLRS 477
L+ + G + + M + GI P Y +ID + LEEA + L+ S
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQ-RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 478 MPVEPNAIVVGTLL-GAC---RMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAG 532
+P+ + L+ G C R+ + +EL R +S + V ++ ++ L + Q+G
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMS---LRGVIANTVTYNTLVQGFCQSG 452
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 142/307 (46%), Gaps = 17/307 (5%)
Query: 292 KGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKV 351
+G +K+A + G D L I C ++ L K +H +
Sbjct: 159 EGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISA 218
Query: 352 LNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEG 411
N+ I+MY+ CG ++ A +F+ M +++L +W +I F +GQGE A++ FS EG
Sbjct: 219 YNSIIEMYSGCGSVEDALTVFNSMP-ERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 412 FEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA 471
+PD F + AC G +++G +F SM K YGI+P +EHY ++ +L+ G+L+EA
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 472 FELLRSMPVEPNAIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQA 531
+ SM EPN + TL+ R+H D+ L + + +L S S + ++
Sbjct: 338 LRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKS 395
Query: 532 GDWMNVASVRLQMKNAGGQKPSGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDL 591
D + R+ G + A I S P++ ++Y + L +
Sbjct: 396 SDLVKEKLQRMAKGPNYGIRYMAAGDI--------------SRPENRELYMALKSLKEHM 441
Query: 592 RQVGYVP 598
++GYVP
Sbjct: 442 IEIGYVP 448
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Query: 247 NIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME 306
+I ++++++ YS G ++ A +F+ PE+NL W +I +A+ G ++A + + +
Sbjct: 215 DISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFK 274
Query: 307 EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCR--FRCSTKVLNAFIDMYAKCGC 364
+ G KPD + I AC G + G S+ + C + + + M A+ G
Sbjct: 275 QEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYV-SLVKMLAEPGY 333
Query: 365 LDAAFGIFSKMTGKKDLVSWNSMIHGFGVHG 395
LD A M DL W ++++ VHG
Sbjct: 334 LDEALRFVESMEPNVDL--WETLMNLSRVHG 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 123 FLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME 182
++ + C +L +++H + DI NS+I+ YS CG V + A+ +F++M
Sbjct: 186 WIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSV--EDALTVFNSMP 243
Query: 183 ERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFE 238
ER+ TW +I + G + A F + D + + G+MN+
Sbjct: 244 ERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLL 303
Query: 239 LFDRML-QWNIIS----WSTMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIIS 287
F+ M ++ II + ++V + G +D A + F + E N+ LW T+++
Sbjct: 304 HFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA-LRFVESMEPNVDLWETLMN 356
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 184/412 (44%), Gaps = 59/412 (14%)
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
F M + +P + LL A +V + +E G D++ N +I+ +
Sbjct: 73 FSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCC 132
Query: 166 CGGVGIDGAMRLFSAM----EERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPE----RDM 217
C V + A+ + M E D VT S++ G R + A L D+M E D+
Sbjct: 133 CFQVSL--ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMV---CGYSRAGDMDMARML 270
V++N ++D K +N AF+ F + ++ N+++++ +V C SR D AR+L
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA--ARLL 248
Query: 271 FDKCPEK---NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAES 327
D +K N++ ++ ++ + + G + EA L+++M + PD I+T +
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD------IVTYSSLI 302
Query: 328 GMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSM 387
L L +I + N D+ GCL D+VS+N++
Sbjct: 303 NGLCLHDRIDEA-------------NQMFDLMVSKGCL-------------ADVVSYNTL 336
Query: 388 IHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYG 447
I+GF + E ++LF M G + T+ L+ AG VDK + +F+ M+ +G
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD-FFG 395
Query: 448 IVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLL-GACR 495
I P I Y ++ L G LE+A FE ++ ++ + + T++ G C+
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 125/255 (49%), Gaps = 21/255 (8%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKA-CTGPSSLPLVQ 138
PNV Y++L+ A NG F M R + PD TY L+ C Q
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAK-ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIG 194
M V K G D+ N+LI+ + C ++ M+LF M +R + VT+N++I
Sbjct: 317 MFDLMVSK-GCLADVVSYNTLINGF--CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 195 GLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLDGYAKAGEMNKAFELFD----RMLQW 246
G + GD+D A + F +M D+ ++N +L G GE+ KA +F+ R +
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 247 NIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLY 302
+I++++T++ G + G ++ A LF K ++V +TT++SG KG + E LY
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 303 DKMEEAGLKPDDGVL 317
KM++ GL +D L
Sbjct: 494 TKMKQEGLMKNDCTL 508
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 170/367 (46%), Gaps = 23/367 (6%)
Query: 98 HPSLTFSTFFHMQREGVYPDNFTYPFLLKA-CTGPSSLPLVQMIHAHVEKFGFYEDIFVP 156
SL S M + G PD T L+ C V ++ VE G+ DI
Sbjct: 135 QVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAY 193
Query: 157 NSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEM 212
N++IDS C ++ A F +E + + VT+ +++ GL A +L +M
Sbjct: 194 NAIIDSL--CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 213 PER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDM 264
++ ++++++ +LD + K G++ +A ELF+ M++ +I+++S+++ G +
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 265 DMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISI 320
D A +FD K ++V + T+I+G+ + +++ L+ +M + GL + ++
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 321 LTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK- 379
+ ++G + ++ + + N + G L+ A IF M ++
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 380 --DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRN 437
D+V++ ++I G G+ E+A LF S+ +G +PD T+ ++ GL+ +
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Query: 438 YFNSMEK 444
+ M++
Sbjct: 492 LYTKMKQ 498
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 172/406 (42%), Gaps = 45/406 (11%)
Query: 29 CSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFN---QVPY-PNVHL 84
C + L I ++LK D L+ F +S AV++ + ++ Y P++
Sbjct: 133 CFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVA 192
Query: 85 YNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHV 144
YN++I + + F F ++R+G+ P+ TY L+ S + + +
Sbjct: 193 YNAIIDSLC-KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 145 EKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAME----ERDAVTWNSMIGGLVRGG 200
K ++ ++L+D++ + G V A LF M + D VT++S+I GL
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVL--EAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 201 DLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVC 256
+D A ++FD M + D+VS+NT+++G+ KA + +LF M Q ++S
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS------ 363
Query: 257 GYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
N V + T+I G+ + G + +A + +M+ G+ PD
Sbjct: 364 ---------------------NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWT 402
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
+L ++G L I +Q+ I K G ++ A+ +F ++
Sbjct: 403 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 462
Query: 377 ---GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTF 419
K D+V++ +M+ G G + L++ M EG + T
Sbjct: 463 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 199/442 (45%), Gaps = 41/442 (9%)
Query: 80 PNVHLYNSLIRAHALNGS--HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLV 137
P+V YNSLI H NG SL + PD ++ L G S + ++
Sbjct: 89 PDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLF---NGFSKMKML 145
Query: 138 QMIHAHVEKFGFYEDIFVPNSL-----IDSYSRCGGVGIDGAMRLFSAMEERDA-----V 187
+ ++ G PN + ID++ + G + + A++ F +M+ RDA V
Sbjct: 146 DEVFVYM---GVMLKCCSPNVVTYSTWIDTFCKSGELQL--ALKSFHSMK-RDALSPNVV 199
Query: 188 TWNSMIGGLVRGGDLDGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRM 243
T+ +I G + GDL+ A L+ EM M V++ ++DG+ K GEM +A E++ RM
Sbjct: 200 TFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM 259
Query: 244 LQ----WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVL----WTTIISGYAEKGFM 295
++ N + ++T++ G+ + GD D A K + + L + IISG G +
Sbjct: 260 VEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKL 319
Query: 296 KEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
KEAT + + ME++ L PD + +++ A +SG + ++ + F L+
Sbjct: 320 KEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Query: 356 IDMYAKCGCLDAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
ID AK G L A F K + V + +I G + LFS + G PD
Sbjct: 380 IDGIAKNGQLHEAIVYFC--IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Query: 416 KYTFIGLLCA-CTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFEL 474
K+ + + C LVD + +++ G++ + Y +I L+ G + EA ++
Sbjct: 438 KFMYTSWIAGLCKQGNLVDAFKLKTRMVQE--GLLLDLLAYTTLIYGLASKGLMVEARQV 495
Query: 475 LRSM---PVEPNAIVVGTLLGA 493
M + P++ V L+ A
Sbjct: 496 FDEMLNSGISPDSAVFDLLIRA 517
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 210/509 (41%), Gaps = 56/509 (11%)
Query: 94 LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDI 153
+N + L+ ++ G P ++ ++ + + I + +FG D+
Sbjct: 32 INSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDV 91
Query: 154 FVPNSLIDSYSRCGGVGIDGAMRLFSAME-------ERDAVTWNSMIGGLVRGGDLDGAF 206
NSLID + R G I A + ++ + D V++NS+ G + LD F
Sbjct: 92 ISYNSLIDGHCRNG--DIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 207 KLFDEMPE---RDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYS 259
M + ++V+++T +D + K+GE+ A + F M L N+++++ ++ GY
Sbjct: 150 VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC 209
Query: 260 RAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDG 315
+AGD+++A L+ + N+V +T +I G+ +KG M+ A +Y +M E ++P+
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 316 VLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKM 375
V +I+ + G K A + R I G L A I M
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 376 TGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLV 432
D+V + +M++ + G+ + A+ ++ ++ GFEPD ++ G +
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 433 DKGRNYFN-----------------------SMEKVY------GIVPQIEHYGCMIDLLS 463
+ YF +E+++ G+VP Y I L
Sbjct: 390 HEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC 449
Query: 464 RGGHLEEAFELLRSMPVEP---NAIVVGTLL-GACRMHNDVELARALSEHLFKLVPSDPG 519
+ G+L +AF+L M E + + TL+ G VE + E L + D
Sbjct: 450 KQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509
Query: 520 NFSLLSNIYAQAGDWMNVASVRLQMKNAG 548
F LL Y + G+ + + L M+ G
Sbjct: 510 VFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 148/332 (44%), Gaps = 22/332 (6%)
Query: 28 RCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVH 83
+ +L++ ++ ++ + + ++ LI F + A +++++ PN
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 84 LYNSLIRAHALNG-SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHA 142
+Y ++I G S ++ F M +G+ D Y ++ G L I
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKF--LAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 143 HVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVR 198
+EK D+ + +++++Y + G + A+ ++ + ER D V ++MI G+ +
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGR--MKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 199 GGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIIS----WSTM 254
G L A F D V + ++D K G+ + LF ++ + ++ +++
Sbjct: 386 NGQLHEAIVYFCIEKAND-VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444
Query: 255 VCGYSRAGDMDMARMLFDKCPEKNLVL----WTTIISGYAEKGFMKEATVLYDKMEEAGL 310
+ G + G++ A L + ++ L+L +TT+I G A KG M EA ++D+M +G+
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504
Query: 311 KPDDGVLISILTACAESGMLGLGKKIHASVQR 342
PD V ++ A + G + + +QR
Sbjct: 505 SPDSAVFDLLIRAYEKEGNMAAASDLLLDMQR 536
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 188/417 (45%), Gaps = 28/417 (6%)
Query: 85 YNSLIRAHALNGSHPSLTFST----FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
Y ++R NG H SL F+ F HM P + LL +V +
Sbjct: 40 YREILR----NGLH-SLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL 94
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAM--RLFSAMEERDAVTWNSMIGGLVR 198
H++ G D++ N L++ + + + + ++ E D VT+ S+I G
Sbjct: 95 CDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 199 GGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIIS 250
G ++ A + ++M E D+V + T++D K G +N A LFD+M + +++
Sbjct: 155 GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVM 214
Query: 251 WSTMVCGYSRAG---DMD-MARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME 306
++++V G +G D D + R + + + +++ + +I + ++G +A LY++M
Sbjct: 215 YTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMI 274
Query: 307 EAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLD 366
+ P+ S++ G + +++ ++ + I+ + KC +D
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 367 AAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL 423
A IF +M+ K + +++ ++I GFG G+ A E+FS MV G P+ T+ LL
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL 394
Query: 424 CACTHAGLVDKGRNYFNSMEK--VYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
+ G V K F M+K + G+ P I Y ++ L G LE+A + M
Sbjct: 395 HCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 185/405 (45%), Gaps = 27/405 (6%)
Query: 97 SHPSLTFSTFFHMQREGVYPDNFTYPFLLKA-CTGPSSLPLVQMIHAHVEKFGFYEDIFV 155
S P L S M + G PD T+ L+ C G + M++ VE G D+ +
Sbjct: 121 SQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE-MGIKPDVVM 179
Query: 156 PNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDE 211
++IDS + G V + A+ LF ME D V + S++ GL G A L
Sbjct: 180 YTTIIDSLCKNGHV--NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237
Query: 212 MPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGD 263
M +R D++++N ++D + K G+ A EL++ M++ NI ++++++ G+ G
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 264 MDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLIS 319
+D AR +F K ++V +T++I+G+ + + +A ++ +M + GL + +
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 320 ILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK 379
++ + G + +++ + + + + N + G + A IF M ++
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 380 ------DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVD 433
++ ++N ++HG +G+ EKAL +F M + T+ ++ AG V
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 434 KGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
N F S+ G+ P + Y MI L R G EA L R M
Sbjct: 478 NAVNLFCSLPS-KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 130/292 (44%), Gaps = 26/292 (8%)
Query: 42 LLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPY----PNVHLYNSLIRAHALNGS 97
+ K + D+ LI AF A ++N++ PN+ Y SLI + G
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 98 HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPN 157
F+ M+ +G +PD Y L+ + I + + G +
Sbjct: 298 VDEAR-QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 158 SLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMP 213
+LI + + G + A +FS M R + T+N ++ L G + A +F++M
Sbjct: 357 TLIQGFGQVGKPNV--AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 214 ERDMV-------SWNTMLDGYAKAGEMNKAFELFDRMLQWNI----ISWSTMVCGYSRAG 262
+R+M ++N +L G G++ KA +F+ M + + I+++ ++ G +AG
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAG 474
Query: 263 DMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGL 310
+ A LF P K N+V +TT+ISG +G EA VL+ KM+E G+
Sbjct: 475 KVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 168/399 (42%), Gaps = 61/399 (15%)
Query: 174 AMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMP----ERDMVSWNTMLD 225
A+ LF+ M E + + ++ + + D L D + D+ + N +++
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 226 GYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKCPE----K 277
+ ++ + A +M++ +I+++++++ G+ M+ A + ++ E
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 278 NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESG--------M 329
++V++TTII + G + A L+D+ME G++PD + S++ SG +
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLL 235
Query: 330 LGLGKK------------IHASVQRCRFRCSTKVLNAFIDM---------------YAKC 362
G+ K+ I A V+ +F + ++ N I M +
Sbjct: 236 RGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCME 295
Query: 363 GCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTF 419
GC+D A +F M K D+V++ S+I+GF + + A+++F M +G + T+
Sbjct: 296 GCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 420 IGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMP 479
L+ G + + F+ M G+ P I Y ++ L G +++A + M
Sbjct: 356 TTLIQGFGQVGKPNVAQEVFSHMVS-RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 480 ------VEPNAIVVGTLLGACRMHNDVELARALSEHLFK 512
V PN LL + +E A + E + K
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRK 453
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 125/545 (22%), Positives = 222/545 (40%), Gaps = 68/545 (12%)
Query: 67 ISSAVNVFNQVP----YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYP 122
I A+N+ +V PN+ +YN+LI + G F M + G+ P++ TY
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLC-KGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 123 FLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV-GIDGAM-RLFSA 180
L+ L + G ++ NSLI+ + + G + +G M + +
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 181 MEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMV----SWNTMLDGYAKAGEMNKA 236
E VT+ S++GG G ++ A +L+ EM + + ++ T+L G +AG + A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 237 FELFDRMLQWNI----ISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV----LWTTIISG 288
+LF+ M +WN+ ++++ M+ GY GDM A + EK +V + +I G
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Query: 289 YAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCS 348
G EA V D + + + ++ +L G L + + +
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 349 TKVLNAFIDMYAKCGCLDAAFGIFSKMTG---KKDLVSWNSMIHGFGVHGQGEKALELFS 405
ID K FG+ +M K D V + SMI G ++A ++
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD 706
Query: 406 SMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRG 465
M++EG P++ T+ ++ AG V++ + M+ V + Q+ YGC +D+L++G
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT-YGCFLDILTKG 765
Query: 466 -----------------------------------GHLEEAFELLRSM---PVEPNAIVV 487
G +EEA EL+ M V P+ I
Sbjct: 766 EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 488 GTLLGACRMHNDV----ELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQ 543
T++ NDV EL +++E K + D ++ L + AG+ +R +
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTE---KGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882
Query: 544 MKNAG 548
M G
Sbjct: 883 MLRQG 887
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 181/439 (41%), Gaps = 49/439 (11%)
Query: 57 LIAAFSLCRHISSAVNVFNQVP-----YPNVHLYNSLIRAHAL-NGSHPSLTFSTFFHMQ 110
LI + R + V VF + P V ++L+ H L H L F M
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALL--HGLVKFRHFGLAMELFNDMV 219
Query: 111 REGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV- 169
G+ PD + Y ++++ L + + AH+E G +I N LID + V
Sbjct: 220 SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVW 279
Query: 170 -GIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEM------PERDMVSWNT 222
+ L + D VT+ +++ GL + + + ++ DEM P VS +
Sbjct: 280 EAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS--S 337
Query: 223 MLDGYAKAGEMNKAFELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLVLW 282
+++G K G++ +A L R++ + + NL ++
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGV---------------------------SPNLFVY 370
Query: 283 TTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQR 342
+I + EA +L+D+M + GL+P+D ++ G L +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 343 CRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEK 399
+ S N+ I+ + K G + AA G ++M KK +V++ S++ G+ G+ K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 400 ALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMI 459
AL L+ M +G P YTF LL AGL+ FN M + + + P Y MI
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVTYNVMI 549
Query: 460 DLLSRGGHLEEAFELLRSM 478
+ G + +AFE L+ M
Sbjct: 550 EGYCEEGDMSKAFEFLKEM 568
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 183/427 (42%), Gaps = 68/427 (15%)
Query: 51 LYVAPKLIAAFSLCRHISSAVNVFNQVP----YPNVHLYNSLIRAHALNGSHPSLTFSTF 106
+Y L++ I AV +FN++ PN YN +I + G S F
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDM-SKAFEFL 565
Query: 107 FHMQREGVYPDNFTY-PFLLKAC-TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYS 164
M +G+ PD ++Y P + C TG +S
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASE------------------------------ 595
Query: 165 RCGGVGIDGAMRLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSW 220
V +DG L E + + + ++ G R G L+ A + EM +R D+V +
Sbjct: 596 --AKVFVDG---LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 221 NTMLDGYAKAGEMNKAF----ELFDRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPE 276
++DG K + F E+ DR L+ + + +++M+ S+ GD A ++D
Sbjct: 651 GVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN 710
Query: 277 K----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDD---GVLISILTACAESGM 329
+ N V +T +I+G + GF+ EA VL KM+ P+ G + ILT G
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT----KGE 766
Query: 330 LGLGK--KIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG---KKDLVSW 384
+ + K ++H ++ + +T N I + + G ++ A + ++M G D +++
Sbjct: 767 VDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 385 NSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEK 444
+MI+ +KA+EL++SM +G PD+ + L+ C AG + K N M +
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885
Query: 445 VYGIVPQ 451
G++P
Sbjct: 886 -QGLIPN 891
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 148/309 (47%), Gaps = 21/309 (6%)
Query: 189 WNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEM--NKAFELFDR 242
+N+M+G R G A +L D M +R D++S+NT+++ K+G + N A EL D
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 243 M----LQWNIISWSTMVCGYSRAGDMDMARMLFD-----KCPEKNLVLWTTIISGYAEKG 293
+ L+ + I+++T++ SR ++D A +F+ +C + +L + +IS Y G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRC-QPDLWTYNAMISVYGRCG 346
Query: 294 FMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLN 353
EA L+ ++E G PD S+L A A K+++ +Q+ F N
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 354 AFIDMYAKCGCLDAAFGIFSKMTG----KKDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
I MY K G LD A ++ M G D +++ +I G + +A L S M+
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLE 469
G +P T+ L+C AG ++ + F+ M + G P Y M+D+L RG
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETR 525
Query: 470 EAFELLRSM 478
+A+ L R M
Sbjct: 526 KAWGLYRDM 534
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 128/263 (48%), Gaps = 23/263 (8%)
Query: 80 PNVHLYNSLIRAHALNGS-HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQ 138
P++ +N+LI A +G P+L ++ G+ PD TY LL AC+ S+L
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIG 194
+ +E D++ N++I Y RCG A RLF +E + DAVT+NS++
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAA--EAERLFMELELKGFFPDAVTYNSLLY 375
Query: 195 GLVRGGDLDGAFKLFDEMPE----RDMVSWNTMLDGYAKAGEMNKAFELFDRM-----LQ 245
R + + +++ +M + +D +++NT++ Y K G+++ A +L+ M
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 246 WNIISWSTMVCGYSRAGDMDMARML----FDKCPEKNLVLWTTIISGYAEKGFMKEATVL 301
+ I+++ ++ +A A L D + L ++ +I GYA+ G +EA
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 302 YDKMEEAGLKPDD---GVLISIL 321
+ M +G KPD+ V++ +L
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVL 518
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 11/262 (4%)
Query: 281 LWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGML--GLGKKIHA 338
++ ++ Y+ G +A L D M + G PD +++ A +SG L L ++
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 339 SVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHG 395
V+ R N + ++ LD A +F M + DL ++N+MI +G G
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 396 QGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHY 455
+A LF + +GF PD T+ LL A +K + + M+K+ G Y
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKM-GFGKDEMTY 405
Query: 456 GCMIDLLSRGGHLEEAFELLRSMP----VEPNAIVVGTLLGAC-RMHNDVELARALSEHL 510
+I + + G L+ A +L + M P+AI L+ + + + VE A +SE L
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 511 FKLVPSDPGNFSLLSNIYAQAG 532
+ +S L YA+AG
Sbjct: 466 DVGIKPTLQTYSALICGYAKAG 487
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 124/270 (45%), Gaps = 12/270 (4%)
Query: 220 WNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLFDKC- 274
+ +++ Y K KA + + Q ++ +W++++ Y++ G + AR +F+
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 275 ---PEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLG 331
P + ++ G ++E V+ +++++ G K ++ +L A A +G +
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 332 LGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG---KKDLVSWNSMI 388
KKI++S++ + + ++ I++ K + A + S+M K +L WNSM+
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 389 HGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGI 448
+ +K ++++ + G EPD+ T+ L+ ++G M + G+
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNL-GL 993
Query: 449 VPQIEHYGCMIDLLSRGGHLEEAFELLRSM 478
P+++ Y +I + LE+A +L +
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 152/355 (42%), Gaps = 22/355 (6%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P++ +NSL+ A+A G + + F M R+G P + LL A L + +
Sbjct: 785 PDLKTWNSLMSAYAQCGCYER-ARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYV 843
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERDAVT----WNSMIGG 195
+ ++ GF ++D+++R G I +++S+M+ + + MI
Sbjct: 844 VVEELQDMGFKISKSSILLMLDAFARAGN--IFEVKKIYSSMKAAGYLPTIRLYRMMIEL 901
Query: 196 LVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWN 247
L +G + A + EM E ++ WN+ML Y + K +++ R+ L+ +
Sbjct: 902 LCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPD 961
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCP----EKNLVLWTTIISGYAEKGFMKEATVLYD 303
+++T++ Y R + +L + + L + ++IS + ++ +++A L++
Sbjct: 962 ETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFE 1021
Query: 304 KMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
++ GLK D +++ +SG +K+ ++ + ++ + Y+ G
Sbjct: 1022 ELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSG 1081
Query: 364 CLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPD 415
A + S + + + ++S+I + +E M EG EPD
Sbjct: 1082 NPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 153/369 (41%), Gaps = 34/369 (9%)
Query: 138 QMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERD-----AVTWNSM 192
+ + ++ + G D+ NSL+ +Y++CG + A +F+ M RD + N +
Sbjct: 772 ESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY--ERARAIFNTM-MRDGPSPTVESINIL 828
Query: 193 IGGLVRGGDLDGAFKLFDEMPERDM---VSWNT---MLDGYAKAGEMNKAFELFDRMLQW 246
+ L G L+ + + +E+ +DM +S ++ MLD +A+AG + + +++ M
Sbjct: 829 LHALCVDGRLEELYVVVEEL--QDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAA 886
Query: 247 ----NIISWSTMV---CGYSRAGDMDMARMLFDKCPEKN----LVLWTTIISGYAEKGFM 295
I + M+ C R D A ++ + E N L +W +++ Y
Sbjct: 887 GYLPTIRLYRMMIELLCKGKRVRD---AEIMVSEMEEANFKVELAIWNSMLKMYTAIEDY 943
Query: 296 KEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAF 355
K+ +Y +++E GL+PD+ +++ G + ++ +
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 356 IDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGF 412
I + K CL+ A +F ++ K D +++M+ G KA +L M + G
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 413 EPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAF 472
EP T L+ + + +G + ++++ + + Y +ID R
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLP-YSSVIDAYLRSKDYNSGI 1122
Query: 473 ELLRSMPVE 481
E L M E
Sbjct: 1123 ERLLEMKKE 1131
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 205/450 (45%), Gaps = 26/450 (5%)
Query: 106 FFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSR 165
F M + +P + LL A LV +E G +++ N +I+ R
Sbjct: 53 FGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCR 112
Query: 166 CGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DM 217
+ A+ + M + VT NS++ G G + A L D+M E D
Sbjct: 113 RSQLSF--ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 170
Query: 218 VSWNTMLDGYAKAGEMNKAFELFDRML----QWNIISWSTMVCGYSRAGDMDMARMLFDK 273
V++ T++ G + + ++A L +RM+ Q +++++ ++ G + G+ D+A L +K
Sbjct: 171 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 230
Query: 274 CP----EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGM 329
E ++V+++T+I + + +A L+ +M+ G++PD S+++ G
Sbjct: 231 MEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 290
Query: 330 LGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVSWNS 386
++ + + + + N+ ID +AK G L A +F +M + ++V++NS
Sbjct: 291 WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 387 MIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVY 446
+I+GF +H + ++A ++F+ MV + PD T+ L+ A V G F M +
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR-R 409
Query: 447 GIVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLLGACRMHNDVELA 503
G+V Y +I + + A F+ + S V PN + TLL + +E A
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 504 RALSEHLFK-LVPSDPGNFSLLSNIYAQAG 532
+ E+L K + D ++++S +AG
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 217/495 (43%), Gaps = 67/495 (13%)
Query: 26 LHRCSNLDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVP----YPN 81
L R S L I +++K + L+ F IS AV + +Q+ P+
Sbjct: 110 LCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 169
Query: 82 VHLYNSLIRAHAL-NGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMI 140
+ +L+ H L + S + M +G PD TY ++ L +
Sbjct: 170 TVTFTTLV--HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 141 HAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGL 196
+EK D+ + +++IDS C +D A+ LF+ M+ + D T++S+I L
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSL--CKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 197 VRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NI 248
G A +L +M ER ++V++N+++D +AK G++ +A +LFD M+Q NI
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 345
Query: 249 ISWSTMVCGYSRAGDMDMARMLFDKCPEKN----LVLWTTIISGYAEKGFMKEATVLYDK 304
+++++++ G+ +D A+ +F K+ +V + T+I+G+ + + + L+
Sbjct: 346 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD 405
Query: 305 MEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGC 364
M GL + ++ IH Q + C
Sbjct: 406 MSRRGLVGNTVTYTTL---------------IHGFFQA-----------------SDC-- 431
Query: 365 LDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIG 421
D A +F +M +++++N+++ G +G+ EKA+ +F + EPD YT+
Sbjct: 432 -DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 422 LLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE 481
+ AG V+ G + F S+ + G+ P + Y MI + G EEA+ L M +
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLS-LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Query: 482 ---PNAIVVGTLLGA 493
P++ TL+ A
Sbjct: 550 GPLPDSGTYNTLIRA 564
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 194/451 (43%), Gaps = 96/451 (21%)
Query: 33 DLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAH 92
DL + ++ K + D+ + +I + RH+ A+N+F +
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE---------------- 265
Query: 93 ALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYED 152
M +G+ PD FTY L+ + + + + +
Sbjct: 266 ----------------MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 153 IFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKL 208
+ NSLID++++ G + A +LF M +R + VT+NS+I G LD A ++
Sbjct: 310 VVTFNSLIDAFAKEGK--LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 209 FDEMPERD----MVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSR 260
F M +D +V++NT+++G+ KA ++ ELF M L N ++++T++ G+ +
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 261 AGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGV 316
A D D A+M+F + N++ + T++ G + G +++A V+++ ++++ ++PD
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPD--- 484
Query: 317 LISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMT 376
N + K G ++ + +F ++
Sbjct: 485 --------------------------------IYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 377 ---GKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA-------C 426
K D++++N+MI GF G E+A LF M +G PD T+ L+ A
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 427 THAGLVDKGRN-YFNSMEKVYGIVPQIEHYG 456
A L+ + R+ F YG+V + H G
Sbjct: 573 ASAELIKEMRSCRFAGDASTYGLVTDMLHDG 603
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 143/593 (24%), Positives = 259/593 (43%), Gaps = 84/593 (14%)
Query: 30 SNLDLVKQIHAQLLKA-HLHQDLYVAPKLIAAFSLC-RHISSAVN------------VFN 75
+N+ ++ I LLK L DL + + FS C R SS N + +
Sbjct: 9 TNMKALRLIQPHLLKTGSLRTDLLCT--ISSFFSSCERDFSSISNGNVCFRERLRSGIVD 66
Query: 76 QVPYPNVHLYNSLIRAHALNGSHPSLT-FSTFF-----------------HMQREGVYPD 117
+ L+ +IR+ L PSL FS FF ++ G+ +
Sbjct: 67 IKKDDAIALFQEMIRSRPL----PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHN 122
Query: 118 NFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRL 177
+T ++ + V K G+ D N+LI G V A+ L
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS--EAVVL 180
Query: 178 FSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAK 229
M E D VT+NS++ G+ R GD A L +M ER D+ +++T++D +
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 230 AGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGD-MDMARMLFDKCPEK---NLVL 281
G ++ A LF M ++ ++++++++V G +AG D A +L D + N++
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300
Query: 282 WTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA-CAESGMLGLGKKIHASV 340
+ ++ + ++G ++EA LY +M G+ P+ +++ C ++ + + V
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 341 QRCRFRCSTKVLN--AFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHG 395
R +CS ++ + I Y +D +F ++ + + V+++ ++ GF G
Sbjct: 361 ---RNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Query: 396 QGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKV---YGIVPQI 452
+ + A ELF MV G PD T+ LL G ++K F ++K GIV
Sbjct: 418 KIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIV--- 474
Query: 453 EHYGCMIDLLSRGGHLEEAFELLRSMP---VEPNAIVVGTLL-GACRMHNDVE---LARA 505
Y +I+ + +GG +E+A+ L S+P V+PN + ++ G C+ + E L R
Sbjct: 475 -MYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 506 LSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKPSGASSI 558
+ E P+D ++ L + + GD A + +MK+ G + ASSI
Sbjct: 534 MEED--GNAPNDC-TYNTLIRAHLRDGDLTASAKLIEEMKSCGFS--ADASSI 581
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 167/382 (43%), Gaps = 62/382 (16%)
Query: 32 LDLVKQIHAQLLKAHLHQDLYVAPKLIAAFSLCRH--ISSAVNVFNQVPYP----NVHLY 85
LDL++++ + +KA D++ +I SLCR I +A+++F ++ +V Y
Sbjct: 213 LDLLRKMEERNVKA----DVFTYSTIID--SLCRDGCIDAAISLFKEMETKGIKSSVVTY 266
Query: 86 NSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
NSL+R G + RE + P+ T+ LL L ++ +
Sbjct: 267 NSLVRGLCKAGKWNDGALLLKDMVSRE-IVPNVITFNVLLDVFVKEGKLQEANELYKEMI 325
Query: 146 KFGFYEDIFVPNSLIDSYSR---------------------------------CGGVGID 172
G +I N+L+D Y C +D
Sbjct: 326 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 385
Query: 173 GAMRLFSAMEER----DAVTWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTML 224
M++F + +R +AVT++ ++ G + G + A +LF EM D++++ +L
Sbjct: 386 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 445
Query: 225 DGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK--- 277
DG G++ KA E+F+ + + I+ ++T++ G + G ++ A LF P K
Sbjct: 446 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 505
Query: 278 -NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKI 336
N++ +T +ISG +KG + EA +L KMEE G P+D +++ A G L K+
Sbjct: 506 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKL 565
Query: 337 HASVQRCRFRCSTKVLNAFIDM 358
++ C F + IDM
Sbjct: 566 IEEMKSCGFSADASSIKMVIDM 587
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 189/422 (44%), Gaps = 44/422 (10%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P+V Y++++ + G + + M+R+G+ P+++ Y ++ L +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKV-WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERD----AVTWNSMIGG 195
+ + + G D V +LID + + G I A + F M RD +T+ ++I G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGD--IRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 196 LVRGGDLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISW 251
+ GD+ A KLF EM E D V++ +++GY KAG M AF + + M+Q
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ------ 449
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
AG C N+V +TT+I G ++G + A L +M + GL+
Sbjct: 450 ---------AG-----------CSP-NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
P+ SI+ +SG + K+ + T +D Y K G +D A I
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 372 FSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA-CT 427
+M GK +V++N +++GF +HG E +L + M+ +G P+ TF L+ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 428 HAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVV 487
L Y + + G+ P + Y ++ + +++EA+ L + M + ++ V
Sbjct: 609 RNNLKAATAIYKDMCSR--GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 488 GT 489
T
Sbjct: 667 ST 668
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 23/229 (10%)
Query: 380 DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTF---IGLLCACTHAGLVDKGR 436
D++S++++++G+ G+ +K +L M +G +P+ Y + IGLLC ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA- 338
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLL-G 492
F+ M + GI+P Y +ID + G + A F + S + P+ + ++ G
Sbjct: 339 --FSEMIR-QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 493 ACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKP 552
C++ + VE + E K + D F+ L N Y +AG + V M AG P
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS-P 454
Query: 553 SGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGIY 601
+ + +T K D+ L+H++ ++G P I+
Sbjct: 455 NVVT----------YTTLIDGLCKEGDL-DSANELLHEMWKIGLQPNIF 492
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 189/422 (44%), Gaps = 44/422 (10%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P+V Y++++ + G + + M+R+G+ P+++ Y ++ L +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKV-WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEERD----AVTWNSMIGG 195
+ + + G D V +LID + + G I A + F M RD +T+ ++I G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGD--IRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 196 LVRGGDLDGAFKLFDEM----PERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQWNIISW 251
+ GD+ A KLF EM E D V++ +++GY KAG M AF + + M+Q
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ------ 449
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLK 311
AG C N+V +TT+I G ++G + A L +M + GL+
Sbjct: 450 ---------AG-----------CSP-NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 312 PDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGI 371
P+ SI+ +SG + K+ + T +D Y K G +D A I
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 372 FSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA-CT 427
+M GK +V++N +++GF +HG E +L + M+ +G P+ TF L+ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 428 HAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVEPNAIVV 487
L Y + + G+ P + Y ++ + +++EA+ L + M + ++ V
Sbjct: 609 RNNLKAATAIYKDMCSR--GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 488 GT 489
T
Sbjct: 667 ST 668
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 23/229 (10%)
Query: 380 DLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTF---IGLLCACTHAGLVDKGR 436
D++S++++++G+ G+ +K +L M +G +P+ Y + IGLLC ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA- 338
Query: 437 NYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLL-G 492
F+ M + GI+P Y +ID + G + A F + S + P+ + ++ G
Sbjct: 339 --FSEMIR-QGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 493 ACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAGGQKP 552
C++ + VE + E K + D F+ L N Y +AG + V M AG P
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS-P 454
Query: 553 SGASSIXXXXXXXXFTVFDHSHPKSDDIYQMIGRLVHDLRQVGYVPGIY 601
+ + +T K D+ L+H++ ++G P I+
Sbjct: 455 NVVT----------YTTLIDGLCKEGDL-DSANELLHEMWKIGLQPNIF 492
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 231/518 (44%), Gaps = 40/518 (7%)
Query: 44 KAHLHQDLYV---APKLIAAFSLCRHISSAVNVFNQVPYPNVHLYNSLIRAHALNGSHPS 100
K +H+ L V A +FS CR + + + Y Y ++R L+
Sbjct: 10 KRFVHRSLVVRGNAATFPLSFSFCRRRAFS----GKTSYD----YREVLRT-GLSDIELD 60
Query: 101 LTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLI 160
F M + +P + LL A + LV +E G +++ N LI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 161 DSYSRCGGVGIDGAM--RLFSAMEERDAVTWNSMIGGLVRGGDLDGAFKLFDEMPER--- 215
+ + RC + + A+ ++ E D VT NS++ G G + A L D+M E
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 216 -DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARML 270
D V++ T++ G + ++A L DRM+Q +++++ +V G + GD D+A L
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 271 FDKCP----EKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAE 326
+K E N+V+++T+I + +A L+ +ME G++P+ S+++
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 327 SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---DLVS 383
G ++ + + + + +A ID + K G L A ++ +M + ++ +
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360
Query: 384 WNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME 443
++S+I+GF + + +A ++ M+ + P+ T+ L+ A VDKG F M
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 444 KVYGIVPQIEHYGCMIDLLSRGGHLEEA---FELLRSMPVEPNAIVVGTLL-GACRMHND 499
+ G+V Y +I + + A F+ + S+ V PN + LL G C+ +
Sbjct: 421 Q-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK---N 476
Query: 500 VELARALS--EHLFK-LVPSDPGNFSLLSNIYAQAGDW 534
+LA+A+ E+L + + D ++++ +AG W
Sbjct: 477 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 186/454 (40%), Gaps = 98/454 (21%)
Query: 78 PYPNVHLYNSLIRAHA-LNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPL 136
P+P++ ++ L+ A A +N ++F M+ G+ + +TY L+ S L L
Sbjct: 74 PFPSIIEFSKLLSAIAKMNKFDLVISFGE--KMEILGISHNLYTYNILINCFCRCSRLSL 131
Query: 137 VQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER------------ 184
+ + K G+ DI NSL++ + C G I A+ L M E
Sbjct: 132 ALALLGKMMKLGYEPDIVTLNSLLNGF--CHGNRISDAVALVDQMVEMGYKPDTVTFTTL 189
Query: 185 ---------------------------DAVTWNSMIGGLVRGGDLDGAFKLFDEMP---- 213
D VT+ +++ GL + GD D A L ++M
Sbjct: 190 IHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249
Query: 214 ERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISWSTMV---CGYSRAGDMDM 266
E ++V ++T++D K + A LF M ++ N+I++S+++ C Y R D
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDA-- 307
Query: 267 ARMLFDKCPEK---NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA 323
+R+L D K NLV ++ +I + +KG + +A LY++M + + P+ S++
Sbjct: 308 SRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLING 367
Query: 324 CAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGKK---D 380
LG K++ + R + N I+ + K +D +F +M+ + +
Sbjct: 368 FCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN 427
Query: 381 LVSWNSMIHGF-------------------GVH----------------GQGEKALELFS 405
V++ ++IHGF GVH G+ KA+ +F
Sbjct: 428 TVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFE 487
Query: 406 SMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYF 439
+ EPD YT+ ++ AG G YF
Sbjct: 488 YLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 196/430 (45%), Gaps = 65/430 (15%)
Query: 90 RAHALNG----SHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVE 145
R +NG P S F + EG P TY L+ A T + + + VE
Sbjct: 322 RTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVE 381
Query: 146 KFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGLVRGGD 201
K G D + N++I++ S G +D AM++F M+E A T+N++I G + G
Sbjct: 382 KNGLKPDTILFNAIINASSESG--NLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439
Query: 202 LDGAFKLFDEMPERDMV-----SWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWS 252
L+ + +L D M +M+ + N ++ + ++ +A+ + +M + ++++++
Sbjct: 440 LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 253 TMVCGYSRAG------DMDMARMLFDKCPEKNLVLWTTIISGYAEKGFMKEATVLYDKME 306
T+ Y+R G DM + RML +K + N+ TI++GY E+G M+EA + +M+
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKV-KPNVRTCGTIVNGYCEEGKMEEALRFFYRMK 558
Query: 307 EAGLKPDDGVLISILTACAE-SGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCL 365
E G+ P+ V S++ + M G+G+ + L
Sbjct: 559 ELGVHPNLFVFNSLIKGFLNINDMDGVGEVVD---------------------------L 591
Query: 366 DAAFGIFSKMTGKKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCA 425
FG+ K D+V+++++++ + G ++ E+++ M+ G +PD + F L
Sbjct: 592 MEEFGV------KPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 426 CTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSM----PVE 481
AG +K N M K +G+ P + Y +I G +++A ++ + M +
Sbjct: 646 YARAGEPEKAEQILNQMRK-FGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLS 704
Query: 482 PNAIVVGTLL 491
PN TL+
Sbjct: 705 PNLTTYETLI 714
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 158/350 (45%), Gaps = 18/350 (5%)
Query: 216 DMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----NIISWSTMVCGYSRAGDMDMARMLF 271
D+ S +++G + G +A +F+ +++ ++I+++T+V +R L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 272 DKCPEKNL----VLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAES 327
K + L +L+ II+ +E G + +A +++KM+E+G KP +++ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 328 GMLGLGKKIHASVQRCR-FRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG---KKDLVS 383
G L ++ + R + + + N + + ++ A+ I KM K D+V+
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 384 WNSMIHGFGVHGQGEKALELF-SSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSM 442
+N++ + G A ++ M+H +P+ T ++ G +++ +F M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 443 EKVYGIVPQIEHYGCMIDLLSRGGHLE---EAFELLRSMPVEPNAIVVGTLLGACRMHND 499
+++ G+ P + + +I ++ E +L+ V+P+ + TL+ A D
Sbjct: 558 KEL-GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGD 616
Query: 500 VELARAL-SEHLFKLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAG 548
++ + ++ L + D FS+L+ YA+AG+ + QM+ G
Sbjct: 617 MKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 80 PNVHLYNSLIRAHALNGS-HPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQ 138
PNV +++ + G +L F F+ M+ GV+P+ F + L+K + + V
Sbjct: 529 PNVRTCGTIVNGYCEEGKMEEALRF--FYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG 586
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEE----RDAVTWNSMIG 194
+ +E+FG D+ ++L++++S G + +++ M E D ++ +
Sbjct: 587 EVVDLMEEFGVKPDVVTFSTLMNAWSSVG--DMKRCEEIYTDMLEGGIDPDIHAFSILAK 644
Query: 195 GLVRGGDLDGAFKLFDEMPE----RDMVSWNTMLDGYAKAGEMNKAFELFDRM-----LQ 245
G R G+ + A ++ ++M + ++V + ++ G+ AGEM KA +++ +M L
Sbjct: 645 GYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLS 704
Query: 246 WNIISWSTMVCGYSRAGDMDMARMLFDKCPEKNLV 280
N+ ++ T++ G+ A A L KN+V
Sbjct: 705 PNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVV 739
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 215/471 (45%), Gaps = 38/471 (8%)
Query: 57 LIAAFSLCRHISSAVNVFNQVP----YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQRE 112
+I ++ + ++ +++ FN++ P + +N L+ + GS + +FF+ +
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTF--VVGSSSFNQWWSFFNENKS 157
Query: 113 GVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGID 172
V D +++ L+K C + + + +FGF ++ + +LID + G I+
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE--IE 215
Query: 173 GAMRLFSAMEERDAV----TWNSMIGGLVRGGDLDGAFKLFDEMPER----DMVSWNTML 224
A LF M + V T+ +I GL + G F+++++M E ++ ++N ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 225 DGYAKAGEMNKAFELFDRM----LQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK--- 277
+ K G AF++FD M + NI++++T++ G R ++ A + D+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 278 -NLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTA--CAESGMLGLGK 334
NL+ + T+I G+ G + +A L ++ GL P V +IL + C + G K
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPS-LVTYNILVSGFCRKGDTSGAAK 394
Query: 335 KIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTG---KKDLVSWNSMIHGF 391
+ +R + S ID +A+ ++ A + M D+ +++ +IHGF
Sbjct: 395 MVKEMEER-GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 392 GVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIVPQ 451
+ GQ +A LF SMV + EP++ + ++ G + ME+ + P
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE-KELAPN 512
Query: 452 IEHYGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIVVGTLLGACRMHND 499
+ Y MI++L + +EA L+ M ++P+ ++ + R ND
Sbjct: 513 VASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI---SRAKND 560
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 129/300 (43%), Gaps = 54/300 (18%)
Query: 79 YPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQ 138
+PN++ YN ++ +G F F M+ GV + TY L+ L
Sbjct: 265 FPNLYTYNCVMNQLCKDGRTKD-AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 139 MIHAHVEKFGFYEDIFVPNSLIDSYSRCGGVGIDGAMRLFSAMEER----DAVTWNSMIG 194
+ ++ G ++ N+LID + CG + A+ L ++ R VT+N ++
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGF--CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 195 GLVRGGDLDGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAFELFDRMLQWNII- 249
G R GD GA K+ EM ER + V++ ++D +A++ M KA +L M + ++
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 250 ---SWSTMVCGYSRAGDMDMARMLFDKCPEKNL----VLWTTIISGYAEKG--------- 293
++S ++ G+ G M+ A LF EKN V++ T+I GY ++G
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 294 ----------------FM----------KEATVLYDKMEEAGLKPDDGVLISILTACAES 327
+M KEA L +KM ++G+ P +L I A +S
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLISRAKNDS 561
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 212/488 (43%), Gaps = 77/488 (15%)
Query: 50 DLYVAPKLIAAFSLCRHISSAVNVFNQV----PYPNVHLYNSLIRAHALNGSHPSLTFST 105
D L+ F L +S AV + +++ P++ ++LI L G S
Sbjct: 139 DTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG-RVSEALVL 197
Query: 106 FFHMQREGVYPDNFTY-PFLLKAC-TGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSY 163
M G PD TY P L + C +G S+L L + +E+ + + +IDS
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD--LFRKMEERNIKASVVQYSIVIDSL 255
Query: 164 SRCGGVGIDGAMRLFSAMEER----DAVTWNSMIGGL----------------------- 196
+ G D A+ LF+ ME + D VT++S+IGGL
Sbjct: 256 CKDGS--FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 197 ------------VRGGDLDGAFKLFDEMPER----DMVSWNTMLDGYAKAGEMNKAFELF 240
V+ G L A +L++EM R D +++N+++DG+ K +++A ++F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 241 DRML----QWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEK 292
D M+ + +I+++S ++ Y +A +D LF + K N + + T++ G+ +
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 293 GFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVL 352
G + A L+ +M G+ P +L ++G L +I +Q+ R +
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 353 NAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIHGFGVHGQGEKALELFSSMVH 409
N I +D A+ +F ++ K D+V++N MI G G +A LF M
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 410 EGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSME-----KVYGIVPQIEHYGCMIDLLSR 464
+G PD +T+ L+ A H G G +S+E KV G +ID+LS
Sbjct: 554 DGCTPDDFTYNILIRA--HLG----GSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS- 606
Query: 465 GGHLEEAF 472
L+++F
Sbjct: 607 DRRLDKSF 614
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 173/380 (45%), Gaps = 31/380 (8%)
Query: 192 MIGGLVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRMLQW----N 247
++ G +G +L+G E DM + M++ Y + ++ AF + R + +
Sbjct: 88 LVLGFCKGMELNGI--------EHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPD 139
Query: 248 IISWSTMVCGYSRAGDMDMARMLFDKCPE----KNLVLWTTIISGYAEKGFMKEATVLYD 303
I++ST+V G+ G + A L D+ E +LV +T+I+G KG + EA VL D
Sbjct: 140 TITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLID 199
Query: 304 KMEEAGLKPDDGVLISILTACAESGMLGLGKKIHASVQRCRFRCSTKVLNAFIDMYAKCG 363
+M E G +PD+ +L +SG L + ++ + S + ID K G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 364 CLDAAFGIFSKMTG---KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFI 420
D A +F++M K D+V+++S+I G G+ + ++ M+ PD TF
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 421 GLLCACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEA---FELLRS 477
L+ G + + + +N M GI P Y +ID + L EA F+L+ S
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEM-ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 478 MPVEPN----AIVVGTLLGACRMHNDVELARALSEHLFKLVPSDPGNFSLLSNIYAQAGD 533
EP+ +I++ + A R+ + + L R +S L+P+ ++ L + Q+G
Sbjct: 379 KGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK--GLIPNTI-TYNTLVLGFCQSGK 435
Query: 534 WMNVASVRLQMKNAGGQKPS 553
+N A Q + G PS
Sbjct: 436 -LNAAKELFQEMVSRGVPPS 454
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/458 (23%), Positives = 200/458 (43%), Gaps = 24/458 (5%)
Query: 80 PNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQM 139
P V +N+++ + G + + M+R + TY L+ + + +
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVD-KIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 140 IHAHVEKFGFYEDIFVPNSLIDSYSRCG----GVGIDGAMRLFSAMEERDAVTWNSMIGG 195
H + + GF + N LI+ Y + G G+ M +A T+N I
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM--LNAGIYPTTSTYNIYICA 352
Query: 196 LVRGGDLDGAFKLFDEMPERDMVSWNTMLDGYAKAGEMNKAFELFDRM----LQWNIISW 251
L G +D A +L M D+VS+NT++ GY K G+ +A LFD + + +I+++
Sbjct: 353 LCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTY 412
Query: 252 STMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMKEATVLYDKMEE 307
+T++ G +G+++ A+ L ++ + +++ +TT++ G+ + G + AT +YD+M
Sbjct: 413 NTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLR 472
Query: 308 AGLKPDDGVLISILTACAESGMLGLGKKIHAS-VQRCRFRCSTKVLNAFIDMYAKCGCLD 366
G+KPD + G ++H V + N ID K G L
Sbjct: 473 KGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLV 532
Query: 367 AAFGIFSKMTG---KKDLVSWNSMIHGFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLL 423
A K+ D V++ ++I G+ +GQ + A L+ M+ + P T+ L+
Sbjct: 533 KAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLI 592
Query: 424 CACTHAGLVDKGRNYFNSMEKVYGIVPQIEHYGCMIDLLSRGGHLEEAFELLRSMPVE-- 481
AG +++ Y M+K G+ P + + ++ + + G+++EA+ L M E
Sbjct: 593 YGHAKAGRLEQAFQYSTEMKK-RGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI 651
Query: 482 -PNAIVVGTLLGA-CRMHNDVELARALSEHLFKLVPSD 517
PN L+ C E+ + E L K + D
Sbjct: 652 PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/464 (21%), Positives = 191/464 (41%), Gaps = 58/464 (12%)
Query: 105 TFFHMQREGVYPDNFTYPFLLKACTGPSSLPLVQMIHAHVEKFGFYEDIFVPNSLIDSYS 164
+F M R+G P +LK + ++ + + G + N+++DS
Sbjct: 190 SFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 165 RCGGVGIDGAMRLFSAMEERD----AVTWNSMIGGLVRGGDLDGAFKLFDEMPERDMV-- 218
+ G ++ +++ M+ R+ VT+N +I G + G ++ A + +M
Sbjct: 250 KAGD--LERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT 307
Query: 219 --SWNTMLDGYAKAGEMNKAFELFDRMLQWNII----SWSTMVCGYSRAGDMDMARMLFD 272
S+N +++GY K G + A+ + D ML I +++ +C G +D AR L
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLS 367
Query: 273 KCPEKNLVLWTTIISGYAEKGFMKEATVLYDKMEEAGLKPDDGVLISILTACAESGMLGL 332
++V + T++ GY + G EA++L+D + + P SI+T
Sbjct: 368 SMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHP------SIVT---------- 411
Query: 333 GKKIHASVQRCRFRCSTKVLNAFIDMYAKCGCLDAAFGIFSKMTGK---KDLVSWNSMIH 389
N ID + G L+ A + +MT + D++++ +++
Sbjct: 412 -------------------YNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVK 452
Query: 390 GFGVHGQGEKALELFSSMVHEGFEPDKYTFIGLLCACTHAGLVDKGRNYFNSMEKVYGIV 449
GF +G A E++ M+ +G +PD Y + G DK M
Sbjct: 453 GFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHA 512
Query: 450 PQIEHYGCMIDLLSRGGHLEEAFELLRSM---PVEPNAIVVGTLLGACRMHNDVELARAL 506
P + Y ID L + G+L +A E R + + P+ + T++ + ++AR L
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL 572
Query: 507 SEHLF--KLVPSDPGNFSLLSNIYAQAGDWMNVASVRLQMKNAG 548
+ + +L PS F L+ +A+AG +MK G
Sbjct: 573 YDEMLRKRLYPSVITYFVLIYG-HAKAGRLEQAFQYSTEMKKRG 615
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 22/257 (8%)
Query: 75 NQVPYPNVHLYNSLIRAHALNGSHPSLTFSTFFHMQREGVYPDNFTYPFLLKACTGPSSL 134
Q+ +P+V Y +L++ NG + S+ + M R+G+ PD + Y G L
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNG-NLSMATEVYDEMLRKGIKPDGYAYT---TRAVGELRL 492
Query: 135 ----PLVQMIHAHVEKFGFYEDIFVPNSLIDSYSRCGGV--GIDGAMRLFSAMEERDAVT 188
++ V D+ + N ID + G + I+ ++F D VT
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 189 WNSMIGGLVRGGDLDGAFKLFDEMPERDM----VSWNTMLDGYAKAGEMNKAF----ELF 240
+ ++I G + G A L+DEM + + +++ ++ G+AKAG + +AF E+
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 241 DRMLQWNIISWSTMVCGYSRAGDMDMARMLFDKCPEK----NLVLWTTIISGYAEKGFMK 296
R ++ N+++ + ++ G +AG++D A K E+ N +T +IS + +
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 672
Query: 297 EATVLYDKMEEAGLKPD 313
E LY +M + ++PD
Sbjct: 673 EVVKLYKEMLDKEIEPD 689