Miyakogusa Predicted Gene

Lj0g3v0020869.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0020869.1 Non Chatacterized Hit- tr|G7L350|G7L350_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,81.6,0,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
seg,NULL,NODE_10168_length_1497_cov_75.666000.path1.1
         (326 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G39410.1 | Symbols:  | Saccharopine dehydrogenase  | chr5:157...   477   e-135

>AT5G39410.1 | Symbols:  | Saccharopine dehydrogenase  |
           chr5:15768415-15770274 REVERSE LENGTH=454
          Length = 454

 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 224/321 (69%), Positives = 268/321 (83%), Gaps = 1/321 (0%)

Query: 1   MERVEAVYHDRAAETGSLVVSACGFDSVPAELGIMFNSRQWVSPAVPNRVEAYVSLESEK 60
           MER+EA YHDRA ETGSL+VSACGFDS+PAELG++FN++QWVSP+VPN++EAY+SLES+K
Sbjct: 130 MERMEANYHDRAEETGSLIVSACGFDSIPAELGLLFNAKQWVSPSVPNQIEAYLSLESDK 189

Query: 61  SIVGNFATYESAVLGVANANKLQELXXXXXXXXXXLIPGPPPSKGETIENQKKIGLWAVK 120
            I GNF TYESAVLGVANA KL+EL           I GPP +KG T+ENQK IGLWA+K
Sbjct: 190 KIAGNFGTYESAVLGVANAEKLKELRRSRPRRPRPTICGPP-AKGPTLENQKTIGLWALK 248

Query: 121 LPSADAAVVRRTLAILKENPNGLTGLNESSEVVEKREAFWSSVKPAHFGVKIGTKSLLGI 180
           LPSADA VVRRTL  L E P+GL G+NES E ++KREAFWSS+KPAHFGVKI +KSL GI
Sbjct: 249 LPSADAVVVRRTLTTLTEKPHGLPGINESPEQIQKREAFWSSIKPAHFGVKITSKSLFGI 308

Query: 181 LRIIMVGICIGLLGNTGFGRWLLLKFPSVFSLGWFKKNGPSEEEVEKASFKMWFVGRGFS 240
            R + +G+ +GLL    FGRWLLLKFPSVFSLGWF+K GPSEEEVE A+FKMWF+GRG+S
Sbjct: 309 FRYVTLGVSLGLLSKFSFGRWLLLKFPSVFSLGWFQKKGPSEEEVESATFKMWFIGRGYS 368

Query: 241 NVSLASQGNSKPDMEIVTRVTGPEIGYIATPIILIQCALILLSQRRNLPKGGVYPPGIIF 300
             SLASQG +KPD+EI+TR++GPEIGYI TPI L+QC LI+L QR +L KGGVY PGI+F
Sbjct: 369 EESLASQGETKPDLEIITRISGPEIGYITTPITLVQCGLIVLGQRESLVKGGVYTPGIVF 428

Query: 301 GPTDLQERLQQNGISFDMISK 321
           G TD+Q+RL+ NGISF++ISK
Sbjct: 429 GSTDIQQRLEDNGISFELISK 449