Miyakogusa Predicted Gene

Lj0g3v0020279.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0020279.1 tr|Q00U01|Q00U01_OSTTA ACT domain-containing
protein (ISS) OS=Ostreococcus tauri GN=Ot16g02490 PE=4
,27.36,2e-17,ACT,ACT domain; ACT-like,NULL; no
description,NULL,NODE_31662_length_1839_cov_99.379013.path2.1
         (402 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36840.1 | Symbols:  | ACT-like superfamily protein | chr2:15...   430   e-121
AT2G39570.1 | Symbols:  | ACT domain-containing protein | chr2:1...   348   4e-96

>AT2G36840.1 | Symbols:  | ACT-like superfamily protein |
           chr2:15451834-15453550 REVERSE LENGTH=410
          Length = 410

 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 231/415 (55%), Positives = 287/415 (69%), Gaps = 18/415 (4%)

Query: 1   MGILHDDVVLIRPPEKEGDPTVITVNCPDKTGLGCDLCRIILFFGLSIVKGDVSTDGKWC 60
           MGIL DDVV+I   EKEGDP+VIT+NCPDKTGLGCDLCRI+LFFGL+IV+GDVSTDGKWC
Sbjct: 1   MGILSDDVVIISQSEKEGDPSVITINCPDKTGLGCDLCRILLFFGLNIVRGDVSTDGKWC 60

Query: 61  YIVFWVVGKQKTRWSLLKKRLVGVCPSCFSASGISY-YCSDMQ---PKPSDVFLLQFCCQ 116
           Y+VFWV+GK  TRW+LLK RLV   PS   A GIS  Y SD +   PK  D+FLL+  C 
Sbjct: 61  YLVFWVIGKPNTRWNLLKMRLVEASPSFSWAFGISRCYLSDSESQPPKLPDLFLLKLACS 120

Query: 117 DRKGLLHDVTEVLCDLELTIHKVKVSTTPDGKVMDLFFITDNRELLHTKKRKDDTIEELA 176
           DR GLL+DVTEVL  LE+ I KVK+STTPDGKVMDLFF+TD RELL T KR+++  E L 
Sbjct: 121 DRTGLLYDVTEVLYKLEINIEKVKISTTPDGKVMDLFFVTDTRELLGTVKRRNEVYEYLR 180

Query: 177 NILKDTIITIDIELVGPDFPVCSQASSFLPPEITENVFESELPVLVQTGTLRSDYVSVTM 236
           + + D++I+ DIELVGP+   CS +SS     + E +F S++     +G   S  VS+ +
Sbjct: 181 DAIGDSMISYDIELVGPEITACSTSSS-----VAETLFSSDVSGEHSSGLHTSSNVSIAV 235

Query: 237 DNMLSPAHTLVQIMCQDHKGLLYDIMRTFKDYNIKFLRA-FTNP--RKCE--LIVLMQQR 291
           DN LS AHTL+ I CQDHKGLLYDIMRTFKD+NI+     FT    + CE  L ++    
Sbjct: 236 DNSLSSAHTLIHITCQDHKGLLYDIMRTFKDFNIQISYGRFTIKLGKNCEIDLFIVQSDG 295

Query: 292 QKIVDHTA-GFSVTRLRRNCSTA-QSSCCNQGLKLA-SGCNPEECPPRAAPSIY-DITLA 347
           +KI+D +     +TRLR       +    N+G        NP E   +  P ++ DI LA
Sbjct: 296 RKILDSSKLNALITRLRAELQQPLRVVMMNRGPDTELLVTNPVELSGKGRPQVFHDIALA 355

Query: 348 LKMLHICIFSAEIGRHVIGDREWEVYRILLDEGEGLSVPRNKIEERVWKMLMGWE 402
           LK +  CIFSAEIGRHV GDREWEVY++L++E + L +PR+KIEE VWK LMGWE
Sbjct: 356 LKKIDTCIFSAEIGRHVTGDREWEVYKVLINEEDSLPIPRSKIEEEVWKTLMGWE 410


>AT2G39570.1 | Symbols:  | ACT domain-containing protein |
           chr2:16507963-16509741 FORWARD LENGTH=411
          Length = 411

 Score =  348 bits (893), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 201/421 (47%), Positives = 255/421 (60%), Gaps = 30/421 (7%)

Query: 1   MGILHDDVVLIRPPEKEGDPTVITVNCPDKTGLGCDLCRIILFFGLSIVKGDVSTDGKWC 60
           MGIL+DD VLI P +  GDPTV+TVNCPD++GLG  LCRIIL FGLSI + D STDG+WC
Sbjct: 1   MGILNDDAVLIEPGKISGDPTVVTVNCPDESGLGSTLCRIILEFGLSITRADFSTDGRWC 60

Query: 61  YIVFWV---VGKQKTRWSLLKKRLVGVCPSCFSASGISYYCSDMQ-PKPSDVFLLQFCCQ 116
           YIVFWV   +   K  W  LK RL+  CPSC    G  Y+C      KP  ++LL+F C+
Sbjct: 61  YIVFWVTPDISSPKIDWDSLKNRLLSACPSCL---GSFYFCLQSNVSKPPSLYLLKFFCR 117

Query: 117 DRKGLLHDVTEVLCDLELTIHKVKVSTTPDGKVMDLFFITDNRELLHTKKRKDDTIEELA 176
           DRKGLLHDVT+VL +LE TI +VKV TTPDG+V+D+FFITD  +LLHTK+R+  T + L 
Sbjct: 118 DRKGLLHDVTKVLTELEFTIQRVKVMTTPDGRVLDMFFITDAMDLLHTKQRQTKTCDHLT 177

Query: 177 NILKDTIITIDIELVGPDFPVCSQASSFLPPEITENVFESELPVLVQTGTLRSDYVSVTM 236
            +L +  ++ ++EL GP+     + SS LPP   + +F    P         S+   +T+
Sbjct: 178 AVLGEHGVSCELELAGPELESVQRFSS-LPPLAADELFG---PDGFDISGSSSNKAVLTV 233

Query: 237 DNMLSPAHTLVQIMCQDHKGLLYDIMRTFKDYNI-----KFLRAFTNPRKCELIVLMQQR 291
           DN LSPAHTL+QI C D KGL YDI+RT KD ++     +F       R  EL V     
Sbjct: 234 DNQLSPAHTLLQIRCVDQKGLFYDILRTSKDCDVHIAYGRFSSKVKGYRNLELFVRGTDG 293

Query: 292 QKIVD--HTAGFSVTRLRRNCSTAQSSCCNQG----LKLASGCNPEECPPRAAPSI-YDI 344
            KI+D  H A F            +    N+G    L +A   NP E   +  P + YD+
Sbjct: 294 NKIMDPKHQANFCARLKEEMVCPLRVIIVNRGPDTELLVA---NPVELSGKGRPRVFYDV 350

Query: 345 TLALKMLHICIFSAEIGRHVIGDREWEVYRILLDEGEGLSV----PRNKIEERVWKMLMG 400
           TLALK L ICIFSAEIGRH   DR+WEVYR LLDE     +     RN++ +RV K LMG
Sbjct: 351 TLALKSLGICIFSAEIGRHSTLDRQWEVYRFLLDESREFPLASLRARNQVVDRVTKTLMG 410

Query: 401 W 401
           W
Sbjct: 411 W 411