Miyakogusa Predicted Gene
- Lj0g3v0018479.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0018479.1 tr|I3SWZ4|I3SWZ4_LOTJA Peptidyl-prolyl cis-trans
isomerase OS=Lotus japonicus PE=2
SV=1,82.14,5e-18,Cyclophilin-like,Cyclophilin-like peptidyl-prolyl
cis-trans isomerase domain; PEPTIDYL-PROLYL CIS-TR,CUFF.1070.1
(76 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G58710.1 | Symbols: ROC7 | rotamase CYP 7 | chr5:23717840-237... 89 6e-19
AT2G29960.2 | Symbols: CYP5, ATCYP5, CYP19-4 | cyclophilin 5 | c... 88 1e-18
AT2G29960.1 | Symbols: CYP5, ATCYP5, CYP19-4 | cyclophilin 5 | c... 88 1e-18
AT3G55920.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 64 1e-11
AT2G21130.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 55 7e-09
AT5G13120.2 | Symbols: CYP20-2 | cyclophilin 20-2 | chr5:4162714... 55 8e-09
AT5G13120.1 | Symbols: ATCYP20-2, CYP20-2 | cyclophilin 20-2 | c... 55 8e-09
AT4G34960.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 55 8e-09
AT4G38740.1 | Symbols: ROC1 | rotamase CYP 1 | chr4:18083620-180... 55 1e-08
AT3G63400.3 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 54 3e-08
AT3G56070.2 | Symbols: ROC2 | rotamase cyclophilin 2 | chr3:2080... 54 3e-08
AT3G63400.2 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 54 3e-08
AT3G56070.1 | Symbols: ROC2 | rotamase cyclophilin 2 | chr3:2080... 54 3e-08
AT3G63400.1 | Symbols: | Cyclophilin-like peptidyl-prolyl cis-t... 54 3e-08
AT2G16600.1 | Symbols: ROC3 | rotamase CYP 3 | chr2:7200862-7201... 48 1e-06
AT2G16600.2 | Symbols: ROC3 | rotamase CYP 3 | chr2:7200862-7201... 48 1e-06
AT4G34870.1 | Symbols: ROC5, ATCYP1 | rotamase cyclophilin 5 | c... 48 1e-06
>AT5G58710.1 | Symbols: ROC7 | rotamase CYP 7 |
chr5:23717840-23719495 FORWARD LENGTH=204
Length = 204
Score = 89.0 bits (219), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 47/56 (83%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGELPL 76
+ I + LDGRHVVFGKV++GMDVVYK+EAEGNQSGTPKSKVVI DSGELPL
Sbjct: 149 QFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGELPL 204
>AT2G29960.2 | Symbols: CYP5, ATCYP5, CYP19-4 | cyclophilin 5 |
chr2:12769183-12770528 REVERSE LENGTH=191
Length = 191
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 46/56 (82%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGELPL 76
+ I + LDGRHVVFGKV+ GMDVVYK+EAEG QSGTPKSKVVIADSGELPL
Sbjct: 136 QFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGELPL 191
>AT2G29960.1 | Symbols: CYP5, ATCYP5, CYP19-4 | cyclophilin 5 |
chr2:12769183-12770528 REVERSE LENGTH=201
Length = 201
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/56 (75%), Positives = 46/56 (82%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGELPL 76
+ I + LDGRHVVFGKV+ GMDVVYK+EAEG QSGTPKSKVVIADSGELPL
Sbjct: 146 QFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGELPL 201
>AT3G55920.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr3:20743529-20745049 REVERSE LENGTH=228
Length = 228
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGELPL 76
+ I + LDG HVVFGKVLSGM+VV K+EA+G SG PK+ V+I SGE+ L
Sbjct: 173 QFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVPKANVIIFASGEVSL 228
>AT2G21130.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr2:9055619-9056143 REVERSE LENGTH=174
Length = 174
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 29 SDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGEL 74
+D LDG+HVVFG+V+ G+DVV +E G+ SG P VVIAD GE+
Sbjct: 127 TDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEI 172
>AT5G13120.2 | Symbols: CYP20-2 | cyclophilin 20-2 |
chr5:4162714-4164720 REVERSE LENGTH=255
Length = 255
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGT-PKSKVVIADSGELPL 76
LDGRHVVFG+V+ GM+VV +E + G P+ KVVIAD G+LP+
Sbjct: 207 LDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLPM 252
>AT5G13120.1 | Symbols: ATCYP20-2, CYP20-2 | cyclophilin 20-2 |
chr5:4162714-4164720 REVERSE LENGTH=259
Length = 259
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGT-PKSKVVIADSGELPL 76
LDGRHVVFG+V+ GM+VV +E + G P+ KVVIAD G+LP+
Sbjct: 211 LDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQLPM 256
>AT4G34960.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr4:16648865-16650646 FORWARD LENGTH=224
Length = 224
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEA-EGNQSGTPKSKVVIADSGELP 75
+ I + L+G HVV GKV+ GMD V+ +E G SG P+ KVVIADSGE+P
Sbjct: 161 QFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADSGEIP 216
>AT4G38740.1 | Symbols: ROC1 | rotamase CYP 1 |
chr4:18083620-18084138 REVERSE LENGTH=172
Length = 172
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 29 SDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGEL 74
+D LDG+HVVFG+V+ G+DVV +E G+ SG P VV+AD G+L
Sbjct: 126 TDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQL 171
>AT3G63400.3 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr3:23412449-23415435 FORWARD LENGTH=570
Length = 570
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 28/42 (66%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGE 73
LDG+HVVFGKV+ GM V+ KME G G P S V I D GE
Sbjct: 133 LDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>AT3G56070.2 | Symbols: ROC2 | rotamase cyclophilin 2 |
chr3:20806987-20807517 REVERSE LENGTH=176
Length = 176
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C +K + LDG+HVVFGKV+ G +VV ME G+ G
Sbjct: 105 LSMANSGPNTNGSQFFICTEK-------TSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMG 157
Query: 61 TPKSKVVIADSGEL 74
P +VVI D GEL
Sbjct: 158 NPSERVVIEDCGEL 171
>AT3G63400.2 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr3:23412449-23415435 FORWARD LENGTH=387
Length = 387
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 28/42 (66%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGE 73
LDG+HVVFGKV+ GM V+ KME G G P S V I D GE
Sbjct: 133 LDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>AT3G56070.1 | Symbols: ROC2 | rotamase cyclophilin 2 |
chr3:20806987-20807517 REVERSE LENGTH=176
Length = 176
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C +K + LDG+HVVFGKV+ G +VV ME G+ G
Sbjct: 105 LSMANSGPNTNGSQFFICTEK-------TSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMG 157
Query: 61 TPKSKVVIADSGEL 74
P +VVI D GEL
Sbjct: 158 NPSERVVIEDCGEL 171
>AT3G63400.1 | Symbols: | Cyclophilin-like peptidyl-prolyl
cis-trans isomerase family protein |
chr3:23412449-23415435 FORWARD LENGTH=570
Length = 570
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 28/42 (66%)
Query: 32 LDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGE 73
LDG+HVVFGKV+ GM V+ KME G G P S V I D GE
Sbjct: 133 LDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>AT2G16600.1 | Symbols: ROC3 | rotamase CYP 3 | chr2:7200862-7201383
FORWARD LENGTH=173
Length = 173
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 21 KLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSGEL 74
+ I + LDG+HVVFG+V+ G++VV +E G+ SG VVIAD G++
Sbjct: 119 QFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQI 172
>AT2G16600.2 | Symbols: ROC3 | rotamase CYP 3 | chr2:7200862-7201383
FORWARD LENGTH=151
Length = 151
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 13 STFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSGTPKSKVVIADSG 72
S F C +K + LDG+HVVFG+V+ G++VV +E G+ SG VVIAD G
Sbjct: 96 SQFFICTEK-------TSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCG 148
Query: 73 EL 74
++
Sbjct: 149 QI 150
>AT4G34870.1 | Symbols: ROC5, ATCYP1 | rotamase cyclophilin 5 |
chr4:16614451-16614969 FORWARD LENGTH=172
Length = 172
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 1 MNMLYKMPILIYSTFLPCFKKLLINAHISDRLDGRHVVFGKVLSGMDVVYKMEAEGNQSG 60
++M P S F C K + LDG+HVVFG+V+ G+DVV +E G+ SG
Sbjct: 105 LSMANSGPNTNGSQFFICTDK-------TSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSG 157
Query: 61 TPKSKVVIADSGEL 74
V I D G+L
Sbjct: 158 KTSKVVTITDCGQL 171