Miyakogusa Predicted Gene

Lj0g3v0017249.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0017249.1 tr|G7K8U7|G7K8U7_MEDTR Nodulation signaling
pathway OS=Medicago truncatula GN=MTR_5g058860 PE=4
SV=1,68.45,0,seg,NULL; GRAS,Transcription factor GRAS; FAMILY NOT
NAMED,NULL,CUFF.953.1
         (492 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G08250.1 | Symbols:  | GRAS family transcription factor | chr...   415   e-116
AT3G54220.1 | Symbols: SCR, SGR1 | GRAS family transcription fac...   170   2e-42
AT5G17490.1 | Symbols: RGL3 | RGA-like protein 3 | chr5:5764316-...   164   2e-40
AT3G03450.1 | Symbols: RGL2 | RGA-like 2 | chr3:819636-821279 RE...   160   2e-39
AT1G66350.1 | Symbols: RGL1, RGL | RGA-like 1 | chr1:24748327-24...   157   1e-38
AT2G01570.1 | Symbols: RGA1, RGA | GRAS family transcription fac...   147   2e-35
AT5G41920.1 | Symbols:  | GRAS family transcription factor | chr...   146   3e-35
AT1G14920.1 | Symbols: GAI, RGA2 | GRAS family transcription fac...   142   7e-34
AT1G55580.1 | Symbols: LAS, SCL18 | GRAS family transcription fa...   140   3e-33
AT5G48150.2 | Symbols: PAT1 | GRAS family transcription factor |...   137   1e-32
AT5G48150.1 | Symbols: PAT1 | GRAS family transcription factor |...   137   1e-32
AT3G50650.1 | Symbols:  | GRAS family transcription factor | chr...   135   6e-32
AT4G17230.1 | Symbols: SCL13 | SCARECROW-like 13 | chr4:9661218-...   132   5e-31
AT5G66770.1 | Symbols:  | GRAS family transcription factor | chr...   132   8e-31
AT1G50600.1 | Symbols: SCL5 | scarecrow-like 5 | chr1:18737398-1...   127   2e-29
AT2G04890.1 | Symbols: SCL21 | SCARECROW-like 21 | chr2:1720575-...   125   5e-29
AT1G63100.1 | Symbols:  | GRAS family transcription factor | chr...   124   1e-28
AT1G21450.1 | Symbols: SCL1 | SCARECROW-like 1 | chr1:7509721-75...   116   4e-26
AT3G60630.1 | Symbols: HAM2, ATHAM2, LOM2 | GRAS family transcri...   104   2e-22
AT4G37650.1 | Symbols: SHR, SGR7 | GRAS family transcription fac...   103   3e-22
AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 14...   100   2e-21
AT4G36710.1 | Symbols:  | GRAS family transcription factor | chr...    99   5e-21
AT5G59450.1 | Symbols:  | GRAS family transcription factor | chr...    99   8e-21
AT1G50420.1 | Symbols: SCL3, SCL-3 | scarecrow-like 3 | chr1:186...    98   1e-20
AT3G46600.1 | Symbols:  | GRAS family transcription factor | chr...    97   3e-20
AT3G46600.2 | Symbols:  | GRAS family transcription factor | chr...    97   4e-20
AT3G46600.3 | Symbols:  | GRAS family transcription factor | chr...    96   4e-20
AT1G07520.1 | Symbols:  | GRAS family transcription factor | chr...    95   1e-19
AT2G29060.1 | Symbols:  | GRAS family transcription factor | chr...    95   1e-19
AT2G29065.1 | Symbols:  | GRAS family transcription factor | chr...    94   2e-19
AT2G45160.1 | Symbols: HAM1, ATHAM1, LOM1 | GRAS family transcri...    93   5e-19
AT4G00150.1 | Symbols: HAM3, ATHAM3, LOM3 | GRAS family transcri...    84   3e-16
AT5G52510.1 | Symbols: SCL8 | SCARECROW-like 8 | chr5:21307196-2...    83   5e-16
AT2G37650.1 | Symbols:  | GRAS family transcription factor | chr...    82   1e-15
AT3G49950.1 | Symbols:  | GRAS family transcription factor | chr...    70   3e-12
AT3G13840.1 | Symbols:  | GRAS family transcription factor | chr...    69   1e-11

>AT4G08250.1 | Symbols:  | GRAS family transcription factor |
           chr4:5196787-5198238 FORWARD LENGTH=483
          Length = 483

 Score =  415 bits (1066), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/393 (55%), Positives = 274/393 (69%), Gaps = 17/393 (4%)

Query: 97  KGLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXX 156
           KGLRLVHLL+AAA+A TGANKS +L R IL RLK+LVS    TNMERLAA+FT       
Sbjct: 100 KGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSPGDRTNMERLAAHFTNGLSKL- 158

Query: 157 XXXXXXHNLNKNSVVA-GPHRED--PQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVA 213
                   L ++SV+    HR+D   Q D+++AF+LLQ+MSPY+ F + TA QAILEAV 
Sbjct: 159 --------LERDSVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVK 210

Query: 214 HERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQE 273
           +ERR+HI+D+D++EG QWASL+QAL SR  GPS  HLRITAL            +A VQE
Sbjct: 211 YERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKS---VAAVQE 267

Query: 274 TGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDS 333
           TGRRLTAFA S+GQPFS+  C+LD +  F TSSLKLVRGEA+V NC+LHLP  +++ P S
Sbjct: 268 TGRRLTAFADSIGQPFSYQHCKLDTN-AFSTSSLKLVRGEAVVINCMLHLPRFSHQTPSS 326

Query: 334 IASFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWAR 393
           + SFLS A+ L+PKLVTL  EEVG +G+ GF+  FMD LH++SA+ DSLEAG  +   AR
Sbjct: 327 VISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPAR 386

Query: 394 GLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLG 453
           G VERVF+GP + + + R+                 L  +GF+ + +SFTN CQAKLLL 
Sbjct: 387 GFVERVFIGPWVANWLTRI-TANDAEVESFASWPQWLETNGFKPLEVSFTNRCQAKLLLS 445

Query: 454 LFNDGYRVEELSNNKLVLSWKSRRLLSASVWTS 486
           LFNDG+RVEEL  N LVL WKSRRL+SAS W S
Sbjct: 446 LFNDGFRVEELGQNGLVLGWKSRRLVSASFWAS 478


>AT3G54220.1 | Symbols: SCR, SGR1 | GRAS family transcription factor
           | chr3:20070550-20072625 FORWARD LENGTH=653
          Length = 653

 Score =  170 bits (430), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/382 (34%), Positives = 192/382 (50%), Gaps = 34/382 (8%)

Query: 109 AEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXHNLNKN 168
           AEA++  N     A  +L+ + +L S    T+ +R+AAYF+              N    
Sbjct: 298 AEAVSADNLEE--ANKLLLEISQL-STPYGTSAQRVAAYFSEAMSARLL------NSCLG 348

Query: 169 SVVAGPHREDPQT---DMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDV 225
              A P R  PQT    M++AFQ+   +SP +KF+HFTANQAI EA   E  VHIID D+
Sbjct: 349 IYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDI 408

Query: 226 SEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASV 285
            +G QW  L   L+SR  GP  PH+R+T L            +  +Q TG+RL+ FA  +
Sbjct: 409 MQGLQWPGLFHILASRPGGP--PHVRLTGL---------GTSMEALQATGKRLSDFADKL 457

Query: 286 GQPFSFHQCRL-DPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGAREL 344
           G PF F  C L +      T  L + + EA+    V  L H  Y    S A  L   + L
Sbjct: 458 GLPFEF--CPLAEKVGNLDTERLNVRKREAV---AVHWLQHSLYDVTGSDAHTLWLLQRL 512

Query: 345 SPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPR 404
           +PK+VT+ E+++   G   F+G F++++H YSA+ DSL A +  +   R +VE+  L   
Sbjct: 513 APKVVTVVEQDLSHAG--SFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKE 570

Query: 405 ITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLF-NDGYRVEE 463
           I + +A +                 +   GF+G+ ++     QA LLLG+F +DGY + +
Sbjct: 571 IRNVLA-VGGPSRSGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVD 629

Query: 464 LSNNKLVLSWKSRRLLSASVWT 485
             N  L L WK   LL+AS WT
Sbjct: 630 -DNGTLKLGWKDLSLLTASAWT 650


>AT5G17490.1 | Symbols: RGL3 | RGA-like protein 3 |
           chr5:5764316-5765887 REVERSE LENGTH=523
          Length = 523

 Score =  164 bits (414), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/396 (33%), Positives = 195/396 (49%), Gaps = 43/396 (10%)

Query: 98  GLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXX 157
           G+RLV  L+A AEA+   N S  LA A++ R+  L +  A   M ++A YF         
Sbjct: 154 GVRLVQALVACAEAVQLENLS--LADALVKRVGLLAASQAGA-MGKVATYFAEALARRI- 209

Query: 158 XXXXXHNLNKNSVVAGPHREDPQTDMLAAFQL-LQDMSPYIKFAHFTANQAILEAVAHER 216
                + ++ ++    P  E+         Q+   D  PY+KFAHFTANQAILEAV   R
Sbjct: 210 -----YRIHPSAAAIDPSFEE-------ILQMNFYDSCPYLKFAHFTANQAILEAVTTSR 257

Query: 217 RVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGR 276
            VH+ID  +++G QW +L+QAL+ R  GP  P  R+T +               +QE G 
Sbjct: 258 VVHVIDLGLNQGMQWPALMQALALRPGGP--PSFRLTGVGNPSNREG-------IQELGW 308

Query: 277 RLTAFAASVGQPFSFHQ------CRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRA 330
           +L   A ++G  F F+         L+PD  F T +      E LV N V  L H     
Sbjct: 309 KLAQLAQAIGVEFKFNGLTTERLSDLEPD-MFETRT----ESETLVVNSVFEL-HPVLSQ 362

Query: 331 PDSIASFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQR 390
           P SI   L+  + + P LVT+ E+E    GD  F+  F ++LH YS++ DSLE G  +  
Sbjct: 363 PGSIEKLLATVKAVKPGLVTVVEQEANHNGDV-FLDRFNEALHYYSSLFDSLEDGVVIPS 421

Query: 391 WARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKL 450
             R + E V+LG +I + VA                   + ++GF  V +      QA L
Sbjct: 422 QDRVMSE-VYLGRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPVNLGSDAFKQASL 480

Query: 451 LLGLF--NDGYRVEELSNNKLVLSWKSRRLLSASVW 484
           LL L    DGYRVEE ++  L+L+W+++ L++AS W
Sbjct: 481 LLALSGGGDGYRVEE-NDGSLMLAWQTKPLIAASAW 515


>AT3G03450.1 | Symbols: RGL2 | RGA-like 2 | chr3:819636-821279
           REVERSE LENGTH=547
          Length = 547

 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 132/405 (32%), Positives = 201/405 (49%), Gaps = 55/405 (13%)

Query: 98  GLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXX 157
           G+RLVH L+A AEA+   N   +LA A++ R+  L    A   M ++A YF         
Sbjct: 177 GVRLVHALVACAEAIHQENL--NLADALVKRVGTLAGSQAGA-MGKVATYFA-------- 225

Query: 158 XXXXXHNLNKNSVVAGPHRE-DPQTDMLAA----FQLLQDM-----SPYIKFAHFTANQA 207
                      ++    +R+   +TD+ AA    F+ + +M      PY+KFAHFTANQA
Sbjct: 226 ----------QALARRIYRDYTAETDVCAAVNPSFEEVLEMHFYESCPYLKFAHFTANQA 275

Query: 208 ILEAVAHERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXX 267
           ILEAV   RRVH+ID  +++G QW +L+QAL+ R  GP  P  R+T +            
Sbjct: 276 ILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGP--PSFRLTGIGPPQTENSD--- 330

Query: 268 IATVQETGRRLTAFAASVGQPFSFHQ------CRLDPDETFRTSSLKLVRGEALVFNCVL 321
             ++Q+ G +L  FA ++G  F F          L+P E F T        E LV N V 
Sbjct: 331 --SLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEP-EMFETRP----ESETLVVNSVF 383

Query: 322 HLPHLNYRAPDSIASFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDS 381
            L  L  R+  SI   L+  + + P +VT+ E+E    G   F+  F ++LH YS++ DS
Sbjct: 384 ELHRLLARS-GSIEKLLNTVKAIKPSIVTVVEQEANHNGIV-FLDRFNEALHYYSSLFDS 441

Query: 382 LEAGFPMQRWARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPIS 441
           LE  + +    R + E V+LG +I + VA                   + ++GF  + + 
Sbjct: 442 LEDSYSLPSQDRVMSE-VYLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLG 500

Query: 442 FTNHCQAKLLLGLF--NDGYRVEELSNNKLVLSWKSRRLLSASVW 484
            +   QA +LL L+   DGYRVEE ++  L++ W++R L++ S W
Sbjct: 501 SSAFKQASMLLSLYATGDGYRVEE-NDGCLMIGWQTRPLITTSAW 544


>AT1G66350.1 | Symbols: RGL1, RGL | RGA-like 1 |
           chr1:24748327-24749862 FORWARD LENGTH=511
          Length = 511

 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 192/396 (48%), Gaps = 48/396 (12%)

Query: 98  GLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXX 157
           G+RLVH L+A AEA+   N    LA A++  +  L S  A   M ++A YF         
Sbjct: 149 GVRLVHALLACAEAVQQNNLK--LADALVKHVGLLASSQAGA-MRKVATYFA-------- 197

Query: 158 XXXXXHNLNKNSVVAGPHREDPQTDM-LAAF-QLLQ----DMSPYIKFAHFTANQAILEA 211
                       +    +R  P+ D+ L++F   LQ    +  PY+KFAHFTANQAILE 
Sbjct: 198 ----------EGLARRIYRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAILEV 247

Query: 212 VAHERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATV 271
            A   +VH+ID  ++ G QW +LIQAL+ R +GP  P  R+T +            +  +
Sbjct: 248 FATAEKVHVIDLGLNHGLQWPALIQALALRPNGP--PDFRLTGI---------GYSLTDI 296

Query: 272 QETGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRG-EALVFNCVLHLPHLNYRA 330
           QE G +L   A+++G  F F    L+     +   L +  G E++  N V  L H     
Sbjct: 297 QEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFEL-HRLLAH 355

Query: 331 PDSIASFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQR 390
           P SI  FLS  + + P ++T+ E+E    G   F+  F +SLH YS++ DSLE G P Q 
Sbjct: 356 PGSIDKFLSTIKSIRPDIMTVVEQEANHNGTV-FLDRFTESLHYYSSLFDSLE-GPPSQ- 412

Query: 391 WARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKL 450
               ++  +FLG +I + VA                       GF+ V I    + QA +
Sbjct: 413 --DRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASM 470

Query: 451 LLGLF--NDGYRVEELSNNKLVLSWKSRRLLSASVW 484
           LL L+   DGY VEE +   L+L W++R L++ S W
Sbjct: 471 LLALYAGADGYNVEE-NEGCLLLGWQTRPLIATSAW 505


>AT2G01570.1 | Symbols: RGA1, RGA | GRAS family transcription factor
           family protein | chr2:255581-257344 REVERSE LENGTH=587
          Length = 587

 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 184/398 (46%), Gaps = 38/398 (9%)

Query: 97  KGLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXX 156
            G+RLVH LMA AEA+   N +  LA A++ ++  L    A   M ++A YF        
Sbjct: 217 NGVRLVHALMACAEAIQQNNLT--LAEALVKQIGCLAVSQAGA-MRKVATYFAEALARRI 273

Query: 157 XXXXXXHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHER 216
                  N   + +          +D L       +  PY+KFAHFTANQAILEA   ++
Sbjct: 274 YRLSPPQNQIDHCL----------SDTLQMH--FYETCPYLKFAHFTANQAILEAFEGKK 321

Query: 217 RVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGR 276
           RVH+IDF +++G QW +L+QAL+ R+ GP  P  R+T +               + E G 
Sbjct: 322 RVHVIDFSMNQGLQWPALMQALALREGGP--PTFRLTGIGPPAPDNSDH-----LHEVGC 374

Query: 277 RLTAFAASVGQPFSFHQCRLDPDETFRTSSLKL--VRGEALVFNCVLHLPHLNYRAPDSI 334
           +L   A ++   F +     +       S L+L     EA+  N V  L  L  R P  I
Sbjct: 375 KLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLGR-PGGI 433

Query: 335 ASFLSGARELSPKLVTLAEEEV---GPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRW 391
              L   +++ P + T+ E+E    GPV    F+  F +SLH YS + DSLE G P  + 
Sbjct: 434 EKVLGVVKQIKPVIFTVVEQESNHNGPV----FLDRFTESLHYYSTLFDSLE-GVPNSQ- 487

Query: 392 ARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLL 451
              ++  V+LG +I + VA                     +SG     +      QA +L
Sbjct: 488 -DKVMSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFKQASML 546

Query: 452 LGLFN--DGYRVEELSNNKLVLSWKSRRLLSASVWTSS 487
           L +FN   GYRVEE SN  L+L W +R L++ S W  S
Sbjct: 547 LSVFNSGQGYRVEE-SNGCLMLGWHTRPLITTSAWKLS 583


>AT5G41920.1 | Symbols:  | GRAS family transcription factor |
           chr5:16779982-16781199 FORWARD LENGTH=405
          Length = 405

 Score =  146 bits (369), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 174/394 (44%), Gaps = 36/394 (9%)

Query: 99  LRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXX 158
           ++L+ LL+  AE +  A      A  +L  + E+ S   ++  ER+ AYF          
Sbjct: 38  IKLLSLLLQCAEYV--ATDHLREASTLLSEISEICSPFGSSP-ERVVAYFAQALQTRVIS 94

Query: 159 XXXXHNLNKNSVVAGPHREDPQT-----DMLAAFQLLQDMSPYIKFAHFTANQAILEAVA 213
                     S    P  E P T      + +A Q    +SP IKF+HFTANQAI +A+ 
Sbjct: 95  SYL-------SGACSPLSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALD 147

Query: 214 HERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQE 273
            E  VHIID DV +G QW +L   L+SR        +RIT                 +  
Sbjct: 148 GEDSVHIIDLDVMQGLQWPALFHILASRPRKLRS--IRITGFGSSSDL---------LAS 196

Query: 274 TGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDS 333
           TGRRL  FA+S+  PF FH            S L   +GEA+V   V  + H  Y    +
Sbjct: 197 TGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVV---VHWMQHRLYDVTGN 253

Query: 334 IASFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWAR 393
               L   R L P L+T+ E+E+       F+G F+++LH YSA+ D+L  G   +   R
Sbjct: 254 NLETLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGER 313

Query: 394 GLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLG 453
             VE++ LG  I + VA                   L   GFR V +      QA LLLG
Sbjct: 314 FTVEQIVLGTEIRNIVAH-----GGGRRKRMKWKEELSRVGFRPVSLRGNPATQAGLLLG 368

Query: 454 LFN-DGYRVEELSNNKLVLSWKSRRLLSASVWTS 486
           +   +GY + E  N  L L WK   LL+AS W S
Sbjct: 369 MLPWNGYTLVE-ENGTLRLGWKDLSLLTASAWKS 401


>AT1G14920.1 | Symbols: GAI, RGA2 | GRAS family transcription factor
           family protein | chr1:5149414-5151015 FORWARD LENGTH=533
          Length = 533

 Score =  142 bits (357), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 123/399 (30%), Positives = 185/399 (46%), Gaps = 40/399 (10%)

Query: 97  KGLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXX 156
            G+RLVH L+A AEA+   N +  +A A++ ++  L        M ++A YF        
Sbjct: 165 NGVRLVHALLACAEAVQKENLT--VAEALVKQIGFLAVSQIGA-MRKVATYFAEA----- 216

Query: 157 XXXXXXHNLNKNSVVAGPHREDPQTDMLAAFQL-LQDMSPYIKFAHFTANQAILEAVAHE 215
                   L +      P +      +    Q+   +  PY+KFAHFTANQAILEA   +
Sbjct: 217 --------LARRIYRLSPSQSPIDHSLSDTLQMHFYETCPYLKFAHFTANQAILEAFQGK 268

Query: 216 RRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETG 275
           +RVH+IDF +S+G QW +L+QAL+ R  GP  P  R+T +               + E G
Sbjct: 269 KRVHVIDFSMSQGLQWPALMQALALRPGGP--PVFRLTGI-----GPPAPDNFDYLHEVG 321

Query: 276 RRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKL--VRGEALVFNCVLHLPHLNYRAPDS 333
            +L   A ++   F +     +       S L+L     E++  N V  L  L  R P +
Sbjct: 322 CKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLGR-PGA 380

Query: 334 IASFLSGARELSPKLVTLAEEEVG---PVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQR 390
           I   L    ++ P++ T+ E+E     P+    F+  F +SLH YS + DSLE G P  +
Sbjct: 381 IDKVLGVVNQIKPEIFTVVEQESNHNSPI----FLDRFTESLHYYSTLFDSLE-GVPSGQ 435

Query: 391 WARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKL 450
               ++  V+LG +I + VA                     ++GF    I      QA +
Sbjct: 436 --DKVMSEVYLGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASM 493

Query: 451 LLGLFN--DGYRVEELSNNKLVLSWKSRRLLSASVWTSS 487
           LL LFN  +GYRVEE S+  L+L W +R L++ S W  S
Sbjct: 494 LLALFNGGEGYRVEE-SDGCLMLGWHTRPLIATSAWKLS 531


>AT1G55580.1 | Symbols: LAS, SCL18 | GRAS family transcription
           factor | chr1:20764106-20765443 FORWARD LENGTH=445
          Length = 445

 Score =  140 bits (352), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/321 (33%), Positives = 154/321 (47%), Gaps = 24/321 (7%)

Query: 177 EDPQTDMLAAFQL-LQDMSPYIKFAHFTANQAILEAVAHERR--VHIIDFDVSEGAQWAS 233
           ++  +D  + + L L  ++P+I+F H TANQAIL+A        +HI+D D+S+G QW  
Sbjct: 135 KNNNSDFESCYYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPP 194

Query: 234 LIQALSSR--KDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSF 291
           L+QAL+ R        P LRIT              +  +  TG RLT FA S+G  F F
Sbjct: 195 LMQALAERSSNPSSPPPSLRITGC---------GRDVTGLNRTGDRLTRFADSLGLQFQF 245

Query: 292 HQCRLDPDE------TFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGARELS 345
           H   +  ++        R  +L  V+GE +  NCV  L  +     D I  FLS  + L+
Sbjct: 246 HTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDGDMIGHFLSAIKSLN 305

Query: 346 PKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRI 405
            ++VT+AE E    GD  F+  F +++  Y A+ DSLEA  P     R  +E+ + G  I
Sbjct: 306 SRIVTMAEREANH-GDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEI 364

Query: 406 TSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLF--NDGYRVEE 463
              VA                   +   GF  VPI      QAKLLL L   ++GY ++ 
Sbjct: 365 LDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQF 424

Query: 464 LSNNKLVLSWKSRRLLSASVW 484
           L NN L L W++R L S S W
Sbjct: 425 L-NNSLFLGWQNRPLFSVSSW 444


>AT5G48150.2 | Symbols: PAT1 | GRAS family transcription factor |
           chr5:19522497-19524053 REVERSE LENGTH=490
          Length = 490

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 170/369 (46%), Gaps = 21/369 (5%)

Query: 121 LARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXHNLNKNSVVAGPHR--ED 178
           +A +++ +L+++VS  +   ++RL AY                  + +S+    +R  E 
Sbjct: 137 MAHSMMEKLRQMVS-VSGEPIQRLGAYLLEGLVAQLAS-------SGSSIYKALNRCPEP 188

Query: 179 PQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWASLIQAL 238
             T++L+   +L ++ PY KF + +AN AI EA+  E RVHIIDF + +G+QW +LIQA 
Sbjct: 189 ASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAF 248

Query: 239 SSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFHQCRLDP 298
           ++R  GP  P +RIT +            ++ V   G RL   A     PF F+      
Sbjct: 249 AARPGGP--PRIRITGIDDMTSAYARGGGLSIV---GNRLAKLAKQFNVPFEFNS-VSVS 302

Query: 299 DETFRTSSLKLVRGEALVFNCVL---HLPHLNYRAPDSIASFLSGARELSPKLVTLAEEE 355
               +  +L +  GEAL  N      H+P  +    +     L   + LSPK+VTL E+E
Sbjct: 303 VSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQE 362

Query: 356 VGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSVARLYRT 415
                 A F   FM++++ Y+AM +S++   P     R  VE+  L   + + +A     
Sbjct: 363 SN-TNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGAD 421

Query: 416 XXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLFNDGYRVEELSNNKLVLSWKS 475
                            +GF   P+S   +   K LL  ++D YR+EE  +  L L W  
Sbjct: 422 RVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEE-RDGALYLGWMH 480

Query: 476 RRLLSASVW 484
           R L+++  W
Sbjct: 481 RDLVASCAW 489


>AT5G48150.1 | Symbols: PAT1 | GRAS family transcription factor |
           chr5:19522497-19524053 REVERSE LENGTH=490
          Length = 490

 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 170/369 (46%), Gaps = 21/369 (5%)

Query: 121 LARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXHNLNKNSVVAGPHR--ED 178
           +A +++ +L+++VS  +   ++RL AY                  + +S+    +R  E 
Sbjct: 137 MAHSMMEKLRQMVS-VSGEPIQRLGAYLLEGLVAQLAS-------SGSSIYKALNRCPEP 188

Query: 179 PQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWASLIQAL 238
             T++L+   +L ++ PY KF + +AN AI EA+  E RVHIIDF + +G+QW +LIQA 
Sbjct: 189 ASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAF 248

Query: 239 SSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFHQCRLDP 298
           ++R  GP  P +RIT +            ++ V   G RL   A     PF F+      
Sbjct: 249 AARPGGP--PRIRITGIDDMTSAYARGGGLSIV---GNRLAKLAKQFNVPFEFNS-VSVS 302

Query: 299 DETFRTSSLKLVRGEALVFNCVL---HLPHLNYRAPDSIASFLSGARELSPKLVTLAEEE 355
               +  +L +  GEAL  N      H+P  +    +     L   + LSPK+VTL E+E
Sbjct: 303 VSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQE 362

Query: 356 VGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSVARLYRT 415
                 A F   FM++++ Y+AM +S++   P     R  VE+  L   + + +A     
Sbjct: 363 SN-TNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGAD 421

Query: 416 XXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLFNDGYRVEELSNNKLVLSWKS 475
                            +GF   P+S   +   K LL  ++D YR+EE  +  L L W  
Sbjct: 422 RVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEE-RDGALYLGWMH 480

Query: 476 RRLLSASVW 484
           R L+++  W
Sbjct: 481 RDLVASCAW 489


>AT3G50650.1 | Symbols:  | GRAS family transcription factor |
           chr3:18806472-18808100 REVERSE LENGTH=542
          Length = 542

 Score =  135 bits (340), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 166/379 (43%), Gaps = 32/379 (8%)

Query: 119 HDLARA------ILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXHNLNKNSVVA 172
           HD AR        LIR+KE VS + +  ++R+  YF                 +K +   
Sbjct: 182 HDYARKPETKPDTLIRIKESVSESGDP-IQRVGYYFAEALS------------HKETESP 228

Query: 173 GPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWA 232
                    D + +++ L D  PY KFAH TANQAILEA      +HI+DF + +G QW+
Sbjct: 229 SSSSSSSLEDFILSYKTLNDACPYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWS 288

Query: 233 SLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFH 292
           +L+QAL++R  G     +RI+ +            +     TG RL  FAA +   F F+
Sbjct: 289 ALLQALATRSSGKPT-RIRISGIPAPSLGDSPGPSLIA---TGNRLRDFAAILDLNFEFY 344

Query: 293 QCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGARELSPKLVTLA 352
              L P +    SS ++   E LV N +L L  L      ++ + L  AR L+P++VTL 
Sbjct: 345 PV-LTPIQLLNGSSFRVDPDEVLVVNFMLELYKLLDETATTVGTALRLARSLNPRIVTLG 403

Query: 353 EEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSV--- 409
           E EV  +    F     +SL  YSA+ +SLE         R  VERV  G RI   V   
Sbjct: 404 EYEVS-LNRVEFANRVKNSLRFYSAVFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSD 462

Query: 410 --ARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLFNDG--YRVEELS 465
                  T              +  +GF  V  S     QAKLLL  +N    Y + E  
Sbjct: 463 DDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESE 522

Query: 466 NNKLVLSWKSRRLLSASVW 484
              + L+W +  LL+ S W
Sbjct: 523 PGFISLAWNNVPLLTVSSW 541


>AT4G17230.1 | Symbols: SCL13 | SCARECROW-like 13 |
           chr4:9661218-9662807 REVERSE LENGTH=529
          Length = 529

 Score =  132 bits (332), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 180/393 (45%), Gaps = 28/393 (7%)

Query: 99  LRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXX 158
           L L  +L+ AA A+  A+     A   L  L+++VS  + + ++RL  Y           
Sbjct: 153 LDLKEVLVEAARAV--ADGDFATAYGFLDVLEQMVS-VSGSPIQRLGTYMAEGLRARLEG 209

Query: 159 XXXXHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRV 218
                N+ K+     P   +    +++   +L ++ PY KFA+ TAN  ILEA+A E RV
Sbjct: 210 SGS--NIYKSLKCNEPTGRE----LMSYMSVLYEICPYWKFAYTTANVEILEAIAGETRV 263

Query: 219 HIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRL 278
           HIIDF +++G+Q+  LIQ L+ R  GP  P LR+T +            ++ V   G RL
Sbjct: 264 HIIDFQIAQGSQYMFLIQELAKRPGGP--PLLRVTGVDDSQSTYARGGGLSLV---GERL 318

Query: 279 TAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIAS-- 336
              A S G PF FH   +   +  R   L L  G A+V N     P++ +  PD   S  
Sbjct: 319 ATLAQSCGVPFEFHDAIMSGCKVQR-EHLGLEPGFAVVVN----FPYVLHHMPDESVSVE 373

Query: 337 -----FLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRW 391
                 L   + LSPKLVTL E+E      + F+  F+++L  Y+AM +S++A  P    
Sbjct: 374 NHRDRLLHLIKSLSPKLVTLVEQESN-TNTSPFLSRFVETLDYYTAMFESIDAARPRDDK 432

Query: 392 ARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLL 451
            R   E+  +   I + +A                   ++ +GF G P+S +    A  +
Sbjct: 433 QRISAEQHCVARDIVNMIACEESERVERHEVLGIWRVRMMMAGFTGWPVSTSAAFAASEM 492

Query: 452 LGLFNDGYRVEELSNNKLVLSWKSRRLLSASVW 484
           L  ++  Y++       L L WK R + + SVW
Sbjct: 493 LKAYDKNYKLGG-HEGALYLFWKRRPMATCSVW 524


>AT5G66770.1 | Symbols:  | GRAS family transcription factor |
           chr5:26660723-26662477 FORWARD LENGTH=584
          Length = 584

 Score =  132 bits (331), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 169/384 (44%), Gaps = 20/384 (5%)

Query: 104 LLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXH 163
           LL A  +    ++   + A   L++++E VS   +   ER+A YFT              
Sbjct: 217 LLKAIYDCARISDSDPNEASKTLLQIRESVSELGDPT-ERVAFYFTEALS---------- 265

Query: 164 NLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDF 223
           N    +  A         D++ +++ L D  PY KFAH TANQAILEA     ++HI+DF
Sbjct: 266 NRLSPNSPATSSSSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDF 325

Query: 224 DVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAA 283
            + +G QW +L+QAL++R  G     +R++ +            +     TG RL  FA 
Sbjct: 326 GIVQGIQWPALLQALATRTSGKPT-QIRVSGIPAPSLGESPEPSLIA---TGNRLRDFAK 381

Query: 284 SVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGARE 343
            +   F F    L P      SS ++   E L  N +L L  L    P  + + L  A+ 
Sbjct: 382 VLDLNFDFIPI-LTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETPTIVDTALRLAKS 440

Query: 344 LSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGP 403
           L+P++VTL E EV  +   GF     ++L  YSA+ +SLE         R  VER   G 
Sbjct: 441 LNPRVVTLGEYEVS-LNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGR 499

Query: 404 RITSSVARLYRTXXXXXXXXXXXXXXLVA-SGFRGVPISFTNHCQAKLLLGLFN--DGYR 460
           RI+  +                    L+  +GF  V +S     QAK+LL  +N  + Y 
Sbjct: 500 RISGLIGPEKTGIHRERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYS 559

Query: 461 VEELSNNKLVLSWKSRRLLSASVW 484
           + E     + L+W    LL+ S W
Sbjct: 560 IVESKPGFISLAWNDLPLLTLSSW 583


>AT1G50600.1 | Symbols: SCL5 | scarecrow-like 5 |
           chr1:18737398-18739547 REVERSE LENGTH=597
          Length = 597

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 147/312 (47%), Gaps = 12/312 (3%)

Query: 177 EDPQ-TDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWASLI 235
           +DP   ++L    +L +  PY KF + +AN AI EAV +E  VHIIDF +S+G QW SLI
Sbjct: 293 KDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLI 352

Query: 236 QALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFHQCR 295
           +AL +R  GP  P++RIT +            +  V   G+RL   A   G PF FH   
Sbjct: 353 RALGARPGGP--PNVRITGIDDPRSSFARQGGLELV---GQRLGKLAEMCGVPFEFHGAA 407

Query: 296 LDPDETFRTSSLKLVRGEALVFNCVL---HLPHLNYRAPDSIASFLSGARELSPKLVTLA 352
           L   E      L +  GEAL  N  L   H+P  +    +     L   + LSP +VTL 
Sbjct: 408 LCCTEV-EIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLV 466

Query: 353 EEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSVARL 412
           E+E      A F+  F+++++ Y A+ +S++         R  VE+  L   + + +A  
Sbjct: 467 EQEAN-TNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACE 525

Query: 413 YRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLFNDGYRVEELSNNKLVLS 472
                               +GF+  P+S   +   K LL  +++ Y +EE  +  L L 
Sbjct: 526 GVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEE-RDGALYLG 584

Query: 473 WKSRRLLSASVW 484
           WK++ L+++  W
Sbjct: 585 WKNQPLITSCAW 596


>AT2G04890.1 | Symbols: SCL21 | SCARECROW-like 21 |
           chr2:1720575-1721816 REVERSE LENGTH=413
          Length = 413

 Score =  125 bits (315), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 180/394 (45%), Gaps = 39/394 (9%)

Query: 99  LRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXX 158
           L+LV  L+A A+A++  N    +AR  +  L+ +VS  +   ++RL AY           
Sbjct: 50  LKLV--LVACAKAVSENNLL--MARWCMGELRGMVS-ISGEPIQRLGAYMLEGLVARLAA 104

Query: 159 XXXXHNLNKNSVVAGPHREDPQT-DMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERR 217
                  + +S+       +P++ + L+   +L ++ PY KF + +AN AI EA+  E R
Sbjct: 105 -------SGSSIYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEER 157

Query: 218 VHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRR 277
           +HIIDF + +G+QW +LIQA ++R  G   P++RIT +            + TV+   +R
Sbjct: 158 IHIIDFQIGQGSQWIALIQAFAARPGG--APNIRITGV-------GDGSVLVTVK---KR 205

Query: 278 LTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIAS- 336
           L   A     PF F+     P       +L +  GEAL  N    L HL    PD   S 
Sbjct: 206 LEKLAKKFDVPFRFNAVS-RPSCEVEVENLDVRDGEALGVNFAYMLHHL----PDESVSM 260

Query: 337 ------FLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQR 390
                  L   + LSPK+VTL E+E      + F+  F+++L  Y+AM +S++   P   
Sbjct: 261 ENHRDRLLRMVKSLSPKVVTLVEQECN-TNTSPFLPRFLETLSYYTAMFESIDVMLPRNH 319

Query: 391 WARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKL 450
             R  +E+  +   + + +A                      +GF   P+S       + 
Sbjct: 320 KERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRA 379

Query: 451 LLGLFNDGYRVEELSNNKLVLSWKSRRLLSASVW 484
           LL  +++GY +EE  +  L L W  R L+S+  W
Sbjct: 380 LLRDYSNGYAIEE-RDGALYLGWMDRILVSSCAW 412


>AT1G63100.1 | Symbols:  | GRAS family transcription factor |
           chr1:23399391-23401367 REVERSE LENGTH=658
          Length = 658

 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 171/407 (42%), Gaps = 38/407 (9%)

Query: 97  KGLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXX 156
           +   LV+LL    +A+   N +       + R  +L S    T M RL AY+        
Sbjct: 270 RDFELVNLLTGCLDAIRSRNIA--AINHFIARTGDLASPRGRTPMTRLIAYYIEALALRV 327

Query: 157 XXXXXXHNLNKNSVVAGPHREDPQT---DMLAAFQLLQDMSPYIKFAHFTANQAILEAVA 213
                   +  +     P RE  +T   +   A + L  ++P  KF HFTAN+ +L A  
Sbjct: 328 A------RMWPHIFHIAPPREFDRTVEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFE 381

Query: 214 HERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQE 273
            + RVHIIDFD+ +G QW S  Q+L+SR + P   H+RIT +               + E
Sbjct: 382 GKERVHIIDFDIKQGLQWPSFFQSLASRINPPH--HVRITGIGESKLE---------LNE 430

Query: 274 TGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPD- 332
           TG RL  FA ++   F FH   +D  E  R   L +  GE++  NCV+ +    Y     
Sbjct: 431 TGDRLHGFAEAMNLQFEFHPV-VDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGA 489

Query: 333 SIASFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWA 392
           +I  FL   R  +P  + LAE+E     +        +SL  YSAM D++          
Sbjct: 490 AIRDFLGLIRSTNPIALVLAEQEAEHNSEQ-LETRVCNSLKYYSAMFDAIHTNLATDSLM 548

Query: 393 RGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLL 452
           R  VE +  G  I + VA                   L   GFR + +S     Q+K+LL
Sbjct: 549 RVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLL 608

Query: 453 GLF---NDGYRVEELSNNK----------LVLSWKSRRLLSASVWTS 486
            ++   N+G+   E S+            + L W  + L + S WT+
Sbjct: 609 RMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAWTT 655


>AT1G21450.1 | Symbols: SCL1 | SCARECROW-like 1 |
           chr1:7509721-7511502 FORWARD LENGTH=593
          Length = 593

 Score =  116 bits (290), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 176/389 (45%), Gaps = 27/389 (6%)

Query: 103 HLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXX 162
            +L++ A AL+       L+  ++  L+++VS   + + +R+AAY               
Sbjct: 224 QILISCARALSEGKLEEALS--MVNELRQIVSIQGDPS-QRIAAYMVEGLAARMAAS--- 277

Query: 163 HNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIID 222
               K    A   +E P  + LAA Q+L ++ P  KF    AN AILEA+  E  VHIID
Sbjct: 278 ---GKFIYRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIID 334

Query: 223 FDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFA 282
           FD+++G Q+ +LI++++        P LR+T +            I  ++  G RL   A
Sbjct: 335 FDINQGNQYMTLIRSIAELPG--KRPRLRLTGI---DDPESVQRSIGGLRIIGLRLEQLA 389

Query: 283 ASVGQPFSFHQCRLDPDET--FRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIAS---F 337
              G  F F   +  P +T     S+L    GE L+ N    L H+   +  ++      
Sbjct: 390 EDNGVSFKF---KAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDEL 446

Query: 338 LSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVE 397
           L   + L+PKLVT+ E++V     + F   F+++   YSA+ +SL+   P +   R  VE
Sbjct: 447 LHMVKSLNPKLVTVVEQDVN-TNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVE 505

Query: 398 RVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPIS--FTNHCQAKLLLGLF 455
           R  L   I + VA                   ++ +GF   P+S   TN+ Q  L+   +
Sbjct: 506 RQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQ-NLIKQQY 564

Query: 456 NDGYRVEELSNNKLVLSWKSRRLLSASVW 484
            + Y+++E    +L   W+ + L+ AS W
Sbjct: 565 CNKYKLKE-EMGELHFCWEEKSLIVASAW 592


>AT3G60630.1 | Symbols: HAM2, ATHAM2, LOM2 | GRAS family
           transcription factor | chr3:22410496-22412367 REVERSE
           LENGTH=623
          Length = 623

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 46/321 (14%)

Query: 184 LAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWASLIQALSSRKD 243
           +AA++   + SP+++F +FTANQ ILE+     R+HI+DFD+  G QWASLIQ L+ +++
Sbjct: 327 IAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQELAGKRN 386

Query: 244 -GPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFHQCRLD----- 297
              S P L+ITA                ++ T   L +FA   G  F      ++     
Sbjct: 387 RSSSAPSLKITAFASPSTVSDEF----ELRFTEENLRSFAGETGVSFEIELLNMEILLNP 442

Query: 298 ---PDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGA--------RELSP 346
              P   FR+S       EA+  N    LP         I+S +SG         +++SP
Sbjct: 443 TYWPLSLFRSS-----EKEAIAVN----LP---------ISSMVSGYLPLILRFLKQISP 484

Query: 347 KLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRIT 406
            +V  ++       DA F    +++L  Y+++ +SL++G      A   +ER  + P I 
Sbjct: 485 NVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQ 544

Query: 407 SSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLFN-DGYRVE--E 463
             +   YR                   GF  V +S T   QA+ LL      G+ +E  +
Sbjct: 545 KLLTNRYR----WMERSPPWRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQ 600

Query: 464 LSNNKLVLSWKSRRLLSASVW 484
            S+  LVL W+ + L++ S W
Sbjct: 601 SSSPSLVLCWQRKELVTVSAW 621


>AT4G37650.1 | Symbols: SHR, SGR7 | GRAS family transcription factor
           | chr4:17691871-17693466 FORWARD LENGTH=531
          Length = 531

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 165/398 (41%), Gaps = 32/398 (8%)

Query: 104 LLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXH 163
           +L+ AA A +  +K    A+ IL  L EL S   +T  ++LA+YF               
Sbjct: 146 VLLEAARAFS--DKDTARAQQILWTLNELSSPYGDTE-QKLASYF--LQALFNRMTGSGE 200

Query: 164 NLNKNSVVAGPHREDPQTDMLAAFQ-------LLQDMSPYIKFAHFTANQAILEAVAHER 216
              +  V A        T+   +F+         Q++SP+  F H  AN AILEAV  E 
Sbjct: 201 RCYRTMVTAA------ATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEA 254

Query: 217 RVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXI-ATVQETG 275
           ++HI+D   +   QW +L++AL++R D    PHLR+T +                ++E G
Sbjct: 255 KIHIVDISSTFCTQWPTLLEALATRSD--DTPHLRLTTVVVANKFVNDQTASHRMMKEIG 312

Query: 276 RRLTAFAASVGQPFSFHQCRLDPD-ETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSI 334
            R+  FA  +G PF F+      D   F  + L +   E L  NCV  +  +  R     
Sbjct: 313 NRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIASRGSPRD 372

Query: 335 ASFLSGARELSPKLVTLAEEEVGPVG------DAGFVGLFMDSLHRYSAMCDSLEAGFPM 388
           A  +S  R L P++VT+ EEE   VG      D  F+  F + L  +    +S E  FP 
Sbjct: 373 A-VISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPR 431

Query: 389 QRWARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQA 448
               R ++ER   G  I   VA                   +  SGF  V  S       
Sbjct: 432 TSNERLMLERA-AGRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDV 490

Query: 449 KLLLGLFNDGY--RVEELSNNKLVLSWKSRRLLSASVW 484
           + LL  + +G    V+      + L W+ + ++ AS W
Sbjct: 491 RALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAW 528


>AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 14 |
           chr1:2313828-2316137 REVERSE LENGTH=769
          Length = 769

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 167/389 (42%), Gaps = 22/389 (5%)

Query: 104 LLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXH 163
           LL+  A+A++  ++    A  +L +++E  S   N + ERLA YF               
Sbjct: 396 LLVLCAQAVSVDDRR--TANEMLRQIREHSSPLGNGS-ERLAHYFANSLEARLA------ 446

Query: 164 NLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDF 223
                   A   ++    DML A+Q    + P+ K A   AN +++   A+   +HIIDF
Sbjct: 447 GTGTQIYTALSSKKTSAADMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDF 506

Query: 224 DVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAA 283
            +S G QW +LI  LS  + G S P LRIT +               VQETG RL  +  
Sbjct: 507 GISYGFQWPALIHRLSLSRPGGS-PKLRITGIELPQRGFRPA---EGVQETGHRLARYCQ 562

Query: 284 SVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHL---NYRAPDSIASFLSG 340
               PF ++       ET +   LKL +GE +V N +    +L            + L  
Sbjct: 563 RHNVPFEYNAI-AQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKL 621

Query: 341 ARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVF 400
            R+++P +   A    G      FV  F ++L  YSA+ D  ++    +   R + E+ F
Sbjct: 622 IRKINPNVFIPAILS-GNYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEF 680

Query: 401 LGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPI--SFTNHCQAKLLLGLFNDG 458
            G  I + VA                   L+ +GFR +P+      + + K+  G ++  
Sbjct: 681 YGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENG-YDKN 739

Query: 459 YRVEELSNNKLVLSWKSRRLLSASVWTSS 487
           + V++ + N L+  WK R + ++S+W  S
Sbjct: 740 FDVDQ-NGNWLLQGWKGRIVYASSLWVPS 767


>AT4G36710.1 | Symbols:  | GRAS family transcription factor |
           chr4:17306060-17307520 FORWARD LENGTH=486
          Length = 486

 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 163/370 (44%), Gaps = 31/370 (8%)

Query: 121 LARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXHNLNKNSVVAGPHREDPQ 180
           LA+ +L RL + +   A   ++R A YF                 N+N +      E  Q
Sbjct: 140 LAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGS------NRNPIRLSSWSEIVQ 193

Query: 181 TDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERR---VHIIDFDVSEGAQWASLIQA 237
              + A +    +SP   F+HFTANQAIL++++ +     VH++DF++  G Q+ASL++ 
Sbjct: 194 R--IRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMRE 251

Query: 238 LSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFHQCRLD 297
           ++ +    SG  LR+TA+               V+E    LT FAA +   F      + 
Sbjct: 252 ITEK--SVSGGFLRVTAVVAEECAVETR----LVKEN---LTQFAAEMKIRFQIEFVLMK 302

Query: 298 PDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGARELSPKLVTLAEEE-- 355
             E     +++ V GE  V   VL  P + +R    I  F++  R +SPK+V   + E  
Sbjct: 303 TFEMLSFKAIRFVEGERTV---VLISPAI-FRRLSGITDFVNNLRRVSPKVVVFVDSEGW 358

Query: 356 VGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSVARLYRT 415
               G   F   F+ +L  Y+ + +SL+A  P     + +VE   L P+I+++V      
Sbjct: 359 TEIAGSGSFRREFVSALEFYTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVE---TA 415

Query: 416 XXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLFN-DGYRVEELSNNKLVLSWK 474
                           A+G R + +S     QA+ LL      G+ V +    +LVL W 
Sbjct: 416 ADRRHTGEMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAK-RQGELVLCWH 474

Query: 475 SRRLLSASVW 484
            R L++ S W
Sbjct: 475 GRALVATSAW 484


>AT5G59450.1 | Symbols:  | GRAS family transcription factor |
           chr5:23974808-23976640 FORWARD LENGTH=610
          Length = 610

 Score = 99.0 bits (245), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 163/406 (40%), Gaps = 32/406 (7%)

Query: 94  HSGKGLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTN--MERLAAYFTXX 151
           H    + L  LL   A+A+     S D  RA   +LKE+ +H+++     +RLA YF   
Sbjct: 217 HKTNTVDLRSLLTQCAQAVA----SFDQRRAT-DKLKEIRAHSSSNGDGTQRLAFYFAEA 271

Query: 152 XXXXXXXXXXXHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEA 211
                       N++       P       D+L A++L     P     +F AN++I E 
Sbjct: 272 LEARITG-----NISPPVSNPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYEL 326

Query: 212 VAHERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATV 271
                ++HI+DF V  G QW  L++ALS R  GP  P LR+T +               V
Sbjct: 327 AMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGP--PMLRVTGIELPQAGFRPSDR---V 381

Query: 272 QETGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAP 331
           +ETGRRL  F      PF F+       ET     L +  GE  V NC+  L +     P
Sbjct: 382 EETGRRLKRFCDQFNVPFEFNFI-AKKWETITLDELMINPGETTVVNCIHRLQY----TP 436

Query: 332 DSIASF-------LSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEA 384
           D   S        L   R+++P L   AE   G      F+  F ++L  YS++ D  + 
Sbjct: 437 DETVSLDSPRDTVLKLFRDINPDLFVFAEIN-GMYNSPFFMTRFREALFHYSSLFDMFDT 495

Query: 385 GF--PMQRWARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISF 442
                 +   R L+ER  L     S ++                   ++ +GF+   IS 
Sbjct: 496 TIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISK 555

Query: 443 TNHCQAKLLLGLFNDGYRVEELSNNKLVLSWKSRRLLSASVWTSSD 488
               +AK ++        V +  NN ++  WK R + + S W  ++
Sbjct: 556 QIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKPAE 601


>AT1G50420.1 | Symbols: SCL3, SCL-3 | scarecrow-like 3 |
           chr1:18678177-18679625 REVERSE LENGTH=482
          Length = 482

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 115/229 (50%), Gaps = 22/229 (9%)

Query: 97  KGLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXX 156
           +GL L+HLL+  A  +  A+ S   A A L +L  L S   +T M+R+AAYFT       
Sbjct: 50  RGLYLIHLLLTCANHV--ASGSLQNANAALEQLSHLASPDGDT-MQRIAAYFTEALANRI 106

Query: 157 XXXXXXHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHER 216
                   L K ++ A   R +  ++ +   +L  +M P +K ++   N+AILEA+  E+
Sbjct: 107 LKSWP--GLYK-ALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEK 163

Query: 217 RVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGR 276
            VH+ID D SE AQW +L+QA +SR +GP  PHLRIT +               +++   
Sbjct: 164 MVHVIDLDASEPAQWLALLQAFNSRPEGP--PHLRITGVHHQK---------EVLEQMAH 212

Query: 277 RLTAFAASVGQPFSFHQC--RLDPDETFRTSSLKLVRGEALVFNCVLHL 323
           RL   A  +  PF F+    RLD         L++  GEAL  + VL L
Sbjct: 213 RLIEEAEKLDIPFQFNPVVSRLD---CLNVEQLRVKTGEALAVSSVLQL 258



 Score = 62.0 bits (149), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 3/150 (2%)

Query: 336 SFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGL 395
           SFL+    LSPK++ + E++    G +  +   ++SL+ Y+A+ D LE   P     R  
Sbjct: 331 SFLNAIWGLSPKVMVVTEQDSDHNG-STLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389

Query: 396 VERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQA-KLLLGL 454
           VE++  G  I + ++                   +  +GF  VP+S+    QA +LL G 
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGC 449

Query: 455 FNDGYRVEELSNNKLVLSWKSRRLLSASVW 484
             DGYR++E S    V+ W+ R L S S W
Sbjct: 450 GFDGYRIKEESGCA-VICWQDRPLYSVSAW 478


>AT3G46600.1 | Symbols:  | GRAS family transcription factor |
           chr3:17158048-17159799 FORWARD LENGTH=583
          Length = 583

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 157/410 (38%), Gaps = 52/410 (12%)

Query: 94  HSGKGLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTAN--TNMERLAAYFTXX 151
            S + + + +LLM  A+A+     S D  RA   +LKE+  H++      +RL  +F   
Sbjct: 202 KSDQPVDMRNLLMQCAQAVA----SFDQRRA-FEKLKEIREHSSRHGDATQRLGYHFAEA 256

Query: 152 XXXXXXXXXXXHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEA 211
                            + ++         D+L A++      P +   +FTAN+ I E 
Sbjct: 257 LEARITGTM-------TTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINEL 309

Query: 212 VAHERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATV 271
            +    +HIIDF +  G QW  LIQALS R  GP  P LR+T +               V
Sbjct: 310 ASKATTLHIIDFGILYGFQWPCLIQALSKRDIGP--PLLRVTGIELPQSGFRPSER---V 364

Query: 272 QETGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAP 331
           +ETGRRL  F      PF +     +  E      L +  GE  V NC+L L +     P
Sbjct: 365 EETGRRLKRFCDKFNVPFEYSFIAKNW-ENITLDDLVINSGETTVVNCILRLQY----TP 419

Query: 332 DSIASF-------LSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEA 384
           D   S        L   R+++P L   AE   G      F+  F ++L   S++ D  E 
Sbjct: 420 DETVSLNSPRDTALKLFRDINPDLFVFAEIN-GTYNSPFFLTRFREALFHCSSLFDMYET 478

Query: 385 GFPMQRWARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTN 444
                   R LVER  +     S +A                   ++ +GFR        
Sbjct: 479 TLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFR-------- 530

Query: 445 HCQAKLLLGLFNDGYR-VEELSNNKLVLS---------WKSRRLLSASVW 484
              AKL   +  DG   V+E  +   V+          WK R L + S W
Sbjct: 531 --PAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCW 578


>AT3G46600.2 | Symbols:  | GRAS family transcription factor |
           chr3:17158379-17159799 FORWARD LENGTH=453
          Length = 453

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 155/399 (38%), Gaps = 32/399 (8%)

Query: 95  SGKGLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTAN--TNMERLAAYFTXXX 152
           S + + + +LLM  A+A+     S D  RA   +LKE+  H++      +RL  +F    
Sbjct: 73  SDQPVDMRNLLMQCAQAVA----SFDQRRA-FEKLKEIREHSSRHGDATQRLGYHFAEAL 127

Query: 153 XXXXXXXXXXHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAV 212
                           + ++         D+L A++      P +   +FTAN+ I E  
Sbjct: 128 EARITGTM-------TTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELA 180

Query: 213 AHERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQ 272
           +    +HIIDF +  G QW  LIQALS R  GP  P LR+T +               V+
Sbjct: 181 SKATTLHIIDFGILYGFQWPCLIQALSKRDIGP--PLLRVTGIELPQSGFRPSER---VE 235

Query: 273 ETGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPD 332
           ETGRRL  F      PF +     +  E      L +  GE  V NC+L L +     PD
Sbjct: 236 ETGRRLKRFCDKFNVPFEYSFIAKNW-ENITLDDLVINSGETTVVNCILRLQY----TPD 290

Query: 333 SIASF-------LSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAG 385
              S        L   R+++P L   AE   G      F+  F ++L   S++ D  E  
Sbjct: 291 ETVSLNSPRDTALKLFRDINPDLFVFAEIN-GTYNSPFFLTRFREALFHCSSLFDMYETT 349

Query: 386 FPMQRWARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNH 445
                  R LVER  +     S +A                   ++ +GFR   +S    
Sbjct: 350 LSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIV 409

Query: 446 CQAKLLLGLFNDGYRVEELSNNKLVLSWKSRRLLSASVW 484
              K ++        V +  N+ +   WK R L + S W
Sbjct: 410 KDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCW 448


>AT3G46600.3 | Symbols:  | GRAS family transcription factor |
           chr3:17158052-17159799 FORWARD LENGTH=551
          Length = 551

 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 155/400 (38%), Gaps = 32/400 (8%)

Query: 94  HSGKGLRLVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTAN--TNMERLAAYFTXX 151
            S + + + +LLM  A+A+     S D  RA   +LKE+  H++      +RL  +F   
Sbjct: 170 KSDQPVDMRNLLMQCAQAVA----SFDQRRA-FEKLKEIREHSSRHGDATQRLGYHFAEA 224

Query: 152 XXXXXXXXXXXHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEA 211
                            + ++         D+L A++      P +   +FTAN+ I E 
Sbjct: 225 LEARITGTM-------TTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINEL 277

Query: 212 VAHERRVHIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATV 271
            +    +HIIDF +  G QW  LIQALS R  GP  P LR+T +               V
Sbjct: 278 ASKATTLHIIDFGILYGFQWPCLIQALSKRDIGP--PLLRVTGIELPQSGFRPSER---V 332

Query: 272 QETGRRLTAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAP 331
           +ETGRRL  F      PF +     +  E      L +  GE  V NC+L L +     P
Sbjct: 333 EETGRRLKRFCDKFNVPFEYSFIAKNW-ENITLDDLVINSGETTVVNCILRLQY----TP 387

Query: 332 DSIASF-------LSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEA 384
           D   S        L   R+++P L   AE   G      F+  F ++L   S++ D  E 
Sbjct: 388 DETVSLNSPRDTALKLFRDINPDLFVFAEIN-GTYNSPFFLTRFREALFHCSSLFDMYET 446

Query: 385 GFPMQRWARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTN 444
                   R LVER  +     S +A                   ++ +GFR   +S   
Sbjct: 447 TLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQI 506

Query: 445 HCQAKLLLGLFNDGYRVEELSNNKLVLSWKSRRLLSASVW 484
               K ++        V +  N+ +   WK R L + S W
Sbjct: 507 VKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCW 546


>AT1G07520.1 | Symbols:  | GRAS family transcription factor |
           chr1:2309718-2311805 REVERSE LENGTH=695
          Length = 695

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 13/311 (4%)

Query: 183 MLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWASLIQALSSRK 242
           +L ++ +    SP++   +F +N+ IL+A      +HI+DF +  G QW   IQ LS  K
Sbjct: 392 ILKSYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLS--K 449

Query: 243 DGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFHQCRLDPDETF 302
             P    LRIT +            I   Q+TGRRLT +    G PF ++       ET 
Sbjct: 450 SNPGLRKLRITGIEIPQHGLRPTERI---QDTGRRLTEYCKRFGVPFEYNAIASKNWETI 506

Query: 303 RTSSLKLVRGEALVFNCVLHLPHLNYRAPDS----IASFLSGARELSPKLVTLAEEEVGP 358
           +    K+   E L  N VL   +L    P         FL   R+++P  V L+    G 
Sbjct: 507 KMEEFKIRPNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPN-VFLSSTVNGS 565

Query: 359 VGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSVARLYRTXXX 418
                F   F ++L  YSA+ D   A    +   R   E  F G  + + +A        
Sbjct: 566 FNAPFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVE 625

Query: 419 XXXXXXXXXXXLVASGFRGVPI--SFTNHCQAKLLLGLFNDGYRVEELSNNKLVLSWKSR 476
                      ++ +GF+  P+        + K+    ++  + ++E S N  +  WK R
Sbjct: 626 RPETYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDS-NWFLQGWKGR 684

Query: 477 RLLSASVWTSS 487
            L S+S W  S
Sbjct: 685 ILFSSSCWVPS 695


>AT2G29060.1 | Symbols:  | GRAS family transcription factor |
           chr2:12481991-12484075 FORWARD LENGTH=694
          Length = 694

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/398 (24%), Positives = 168/398 (42%), Gaps = 36/398 (9%)

Query: 101 LVHLLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXX 160
           L  +L++ A+A++  ++    A  +L R+++  S   +   ERLA YF            
Sbjct: 318 LRTMLVSCAQAVSINDRR--TADELLSRIRQHSSSYGD-GTERLAHYFANSLEARLA--- 371

Query: 161 XXHNLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAI--LEAVAHERRV 218
               +      A   ++   +DML A+Q    + P+ K A   AN +I  L + A+ + +
Sbjct: 372 ---GIGTQVYTALSSKKTSTSDMLKAYQTYISVCPFKKIAIIFANHSIMRLASSANAKTI 428

Query: 219 HIIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRL 278
           HIIDF +S+G QW SLI  L+ R+   S   LRIT +            +    ETGRRL
Sbjct: 429 HIIDFGISDGFQWPSLIHRLAWRRG--SSCKLRITGIELPQRGFRPAEGVI---ETGRRL 483

Query: 279 TAFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFL 338
             +      PF ++       E+ +   LKL  GE +  N +    +L     +++A  +
Sbjct: 484 AKYCQKFNIPFEYNAI-AQKWESIKLEDLKLKEGEFVAVNSLFRFRNL---LDETVA--V 537

Query: 339 SGARELSPKLVTLAEEEV-------GPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRW 391
              R+   KL+   + +V       G      FV  F + L  YS++ D  +     +  
Sbjct: 538 HSPRDTVLKLIRKIKPDVFIPGILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDP 597

Query: 392 ARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLL 451
            R + E+ F G  I + VA                    + +GFR +P+      + KL+
Sbjct: 598 MRVMFEKEFYGREIMNVVACEGTERVERPESYKQWQARAMRAGFRQIPLEKELVQKLKLM 657

Query: 452 LGLFNDGYRVEELSNNK----LVLSWKSRRLLSASVWT 485
           +     GY+ +E   ++    L+  WK R +  +S+W 
Sbjct: 658 V---ESGYKPKEFDVDQDCHWLLQGWKGRIVYGSSIWV 692


>AT2G29065.1 | Symbols:  | GRAS family transcription factor |
           chr2:12485049-12486941 FORWARD LENGTH=630
          Length = 630

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 129/319 (40%), Gaps = 21/319 (6%)

Query: 177 EDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWASLIQ 236
           +D   D + A+++    SP++   +F +   IL+       +HI+DF +  G QW   IQ
Sbjct: 321 KDTAADTIRAYRVYLSSSPFVTLMYFFSIWMILDVAKDAPVLHIVDFGILYGFQWPMFIQ 380

Query: 237 ALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFHQCRL 296
           ++S RKD P    LRIT +            I   +ETGRRL  +      PF +     
Sbjct: 381 SISDRKDVPR--KLRITGIELPQCGFRPAERI---EETGRRLAEYCKRFNVPFEYKAIAS 435

Query: 297 DPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGARELSPKLVTLAEEEV 356
              ET R   L +   E L  N  L L +L     D   S  +  R+   KL+     +V
Sbjct: 436 QNWETIRIEDLDIRPNEVLAVNAGLRLKNLQ----DETGSEENCPRDAVLKLIRNMNPDV 491

Query: 357 -------GPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSV 409
                  G      F+  F ++++ YSA+ D  ++  P     R   ER F G    + +
Sbjct: 492 FIHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERIRFEREFYGREAMNVI 551

Query: 410 ARLYRTXXXXXXXXXXXXXXLVASGFRGVPIS--FTNHCQAKLLLGLFNDGYRVEELSNN 467
           A                   +V +GF+   I        + KL    ++  + V+E  N+
Sbjct: 552 ACEEADRVERPETYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKWRYHKDFVVDE--NS 609

Query: 468 KLVLS-WKSRRLLSASVWT 485
           K +L  WK R L ++S W 
Sbjct: 610 KWLLQGWKGRTLYASSCWV 628


>AT2G45160.1 | Symbols: HAM1, ATHAM1, LOM1 | GRAS family
           transcription factor | chr2:18618110-18620032 REVERSE
           LENGTH=640
          Length = 640

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 174/402 (43%), Gaps = 49/402 (12%)

Query: 101 LVHLLMAAAEAL-TGANKSHD---LARAILIRLKELVSHTANTNMERLAAYFTXXXXXXX 156
           ++  L  AAE + T  N + D   LA+ IL RL    +H  NT+    + +         
Sbjct: 268 IIEQLFNAAELIGTTGNNNGDHTVLAQGILARL----NHHLNTSSNHKSPFQRAASHIAE 323

Query: 157 XXXXXXHNLNKNSVVAGPHREDPQTDML--AAFQLLQDMSPYIKFAHFTANQAILEAVAH 214
                 HN +   ++       P+  +L  AA++   + SP+++F +FTANQ+ILE+   
Sbjct: 324 ALLSLIHNESSPPLIT------PENLILRIAAYRSFSETSPFLQFVNFTANQSILESCNE 377

Query: 215 E--RRVHIIDFDVSEGAQWASLIQALSS-----RKDGPSGPHLRITALXXXXXXXXXXXX 267
               R+HIIDFDV  G QW+SL+Q L+S     R++  S   L++T              
Sbjct: 378 SGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASS--LKLTVFAPPPSTVSDEFE 435

Query: 268 IATVQETGRRLTAFAASVGQPFSFH----QCRLDPDETFRTSSLKLVRGEALVFNCVLHL 323
           +   +E    L  FA  V  PF       +  L+P   +   SL+    EA+  N    L
Sbjct: 436 LRFTEEN---LKTFAGEVKIPFEIELLSVELLLNP--AYWPLSLRSSEKEAIAVN----L 486

Query: 324 PHLNYRAPDSIASFLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLE 383
           P +N  A   +   L   ++LSP +V  ++       DA F    + SL  ++++ +SL+
Sbjct: 487 P-VNSVASGYLPLILRFLKQLSPNIVVCSDRGCD-RNDAPFPNAVIHSLQYHTSLLESLD 544

Query: 384 AGFPMQRWARGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFT 443
           A    Q      +ER ++ P I   + + +R                   GF    +S  
Sbjct: 545 AN---QNQDDSSIERFWVQPSIEKLLMKRHR----WIERSPPWRILFTQCGFSPASLSQM 597

Query: 444 NHCQAKLLLGLFN-DGYRVEELSNNKLVLSWKSRRLLSASVW 484
              QA+ LL      G+ VE+   + LV+ W+ + L++ S W
Sbjct: 598 AEAQAECLLQRNPVRGFHVEK-RQSSLVMCWQRKELVTVSAW 638


>AT4G00150.1 | Symbols: HAM3, ATHAM3, LOM3 | GRAS family
           transcription factor | chr4:57429-59105 REVERSE
           LENGTH=558
          Length = 558

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 152/383 (39%), Gaps = 41/383 (10%)

Query: 105 LMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXHN 164
           L+ AAE +        LA+ IL RL + +S      +ER A YF                
Sbjct: 209 LVKAAEVIESDTC---LAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVS--QT 263

Query: 165 LNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFD 224
           LN  S++            +AA++   ++SP ++FA+FT+NQA+LE+     R+HIIDFD
Sbjct: 264 LNPYSLIFK----------IAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFD 313

Query: 225 VSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAAS 284
           +  G QWASL+Q L  R D  +   L+IT                    T   L  FA+ 
Sbjct: 314 IGYGGQWASLMQELVLR-DNAAPLSLKITVFASPANHDQLELGF-----TQDNLKHFASE 367

Query: 285 VGQPFSFHQCRLD--PDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLSGAR 342
           +          LD     ++  SS K      +      HLP +           L   +
Sbjct: 368 INISLDIQVLSLDLLGSISWPNSSEKEAVAVNISAASFSHLPLV-----------LRFVK 416

Query: 343 ELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLG 402
            LSP ++  ++       D  F      SLH ++A+ +SL+A       A   +ER  + 
Sbjct: 417 HLSPTIIVCSDRGCERT-DLPFSQQLAHSLHSHTALFESLDA-VNANLDAMQKIERFLIQ 474

Query: 403 PRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLFN-DGYRV 461
           P I   V    R                +  GF  V  S     QA+ L+      G+ V
Sbjct: 475 PEIEKLVLDRSRP---IERPMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHV 531

Query: 462 EELSNNKLVLSWKSRRLLSASVW 484
           E+  +N L+L W+   L+  S W
Sbjct: 532 EK-KHNSLLLCWQRTELVGVSAW 553


>AT5G52510.1 | Symbols: SCL8 | SCARECROW-like 8 |
           chr5:21307196-21309118 FORWARD LENGTH=640
          Length = 640

 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 139/332 (41%), Gaps = 23/332 (6%)

Query: 169 SVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERR----VHIIDFD 224
           S +A P  E    + L + QLL ++SP  K     AN AIL+A  +        H+IDFD
Sbjct: 315 SRIASPVTELYGKEHLISTQLLYELSPCFKLGFEAANLAILDAADNNDGGMMIPHVIDFD 374

Query: 225 VSEGAQWASLIQALSSRKDGPS----GPHLRITALXXXXXXXXXXXXIAT-VQETGRRLT 279
           + EG Q+ +L++ LS+R++G S     P ++ITA+                ++  G  L+
Sbjct: 375 IGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKAVGDLLS 434

Query: 280 AFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPD-SIAS-- 336
                +G   SF+             SL     E L  N    L    YR PD S+ +  
Sbjct: 435 QLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKL----YRVPDESVCTEN 490

Query: 337 ----FLSGARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWA 392
                L   + L P++VTL E+E+     A F+G   +S   Y A+ +S+E+  P     
Sbjct: 491 PRDELLRRVKGLKPRVVTLVEQEMNS-NTAPFLGRVSESCACYGALLESVESTVPSTNSD 549

Query: 393 RGLVERVFLGPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLL 452
           R  VE   +G ++ ++VA                   +  +GF  +P+S       K   
Sbjct: 550 RAKVEE-GIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSRG 608

Query: 453 GLFNDGYRVEELSNNKLVLSWKSRRLLSASVW 484
              + G+ V+E  N  +   W  R L  AS W
Sbjct: 609 NRVHPGFTVKE-DNGGVCFGWMGRALTVASAW 639


>AT2G37650.1 | Symbols:  | GRAS family transcription factor |
           chr2:15792623-15794779 FORWARD LENGTH=718
          Length = 718

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 122/305 (40%), Gaps = 12/305 (3%)

Query: 183 MLAAFQLLQDMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWASLIQALSSRK 242
           +L A QL     P+ K ++F  N+ I + V + +RVH+IDF +  G QW +LI   S   
Sbjct: 417 VLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY- 475

Query: 243 DGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFHQCRLDPDETF 302
                P +RIT +               V+ETG+RL A+A   G PF +       D   
Sbjct: 476 ---GSPKVRITGIEFPQPGFRPA---QRVEETGQRLAAYAKLFGVPFEYKAIAKKWD-AI 528

Query: 303 RTSSLKLVRGEALVFNCVLHLPHL---NYRAPDSIASFLSGARELSPKLVTLAEEEVGPV 359
           +   L + R E  V NC+    +L   + +      + L+   +++P L        G  
Sbjct: 529 QLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVN-GAY 587

Query: 360 GDAGFVGLFMDSLHRYSAMCDSLEAGFPMQRWARGLVERVFLGPRITSSVARLYRTXXXX 419
               FV  F ++L  +S++ D LE   P +   R  +E    G    + +A         
Sbjct: 588 NAPFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVER 647

Query: 420 XXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLFNDGYRVEELSNNKLVLSWKSRRLL 479
                      + SG   VP   +    +   +  F     V +  N  L+  WK R ++
Sbjct: 648 PETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVM 707

Query: 480 SASVW 484
           + SVW
Sbjct: 708 ALSVW 712


>AT3G49950.1 | Symbols:  | GRAS family transcription factor |
           chr3:18522570-18523802 FORWARD LENGTH=410
          Length = 410

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 135/324 (41%), Gaps = 28/324 (8%)

Query: 179 PQTDMLAAFQLLQ-----DMSPYIKFAHFTANQAILEAVAHERRVHIIDFDVSEGAQWAS 233
           PQ D L  F +++     D++P+ +F    AN AIL AV     VHI+D  ++   Q  +
Sbjct: 94  PQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLSLTHCMQIPT 153

Query: 234 LIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLTAFAASVGQPFSFHQ 293
           LI A++SR + P  P L++T +              + +E G +L  FA +      F  
Sbjct: 154 LIDAMASRLNKPP-PLLKLTVVSSSDHFPPFIN--ISYEELGSKLVNFATTRNITMEFTI 210

Query: 294 CRLDPDETFRTSSLKLVR------GEALVFNCVLHLPH-----LNYRAPDSIASFLSGAR 342
                 + F +S L+ +R       EALV NC + L +     L   +      FL   R
Sbjct: 211 VPSTYSDGF-SSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTVFLKQLR 269

Query: 343 ELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGFPMQ-RWARGLVERVFL 401
            L+P++VTL EE+V  +     V     + + +    D+ +     Q RW    +     
Sbjct: 270 SLNPRIVTLIEEDVD-LTSENLVNRLKSAFNYFWIPFDTTDTFMSEQRRWYEAEISW--- 325

Query: 402 GPRITSSVARLYRTXXXXXXXXXXXXXXLVASGFRGVPISFTNHCQAKLLLGLFNDGYRV 461
             +I + VA+                  +  + F GV +        K +L     G+ +
Sbjct: 326 --KIENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLEEHAVGWGM 383

Query: 462 -EELSNNKLVLSWKSRRLLSASVW 484
            +E  +  LVL+WK   ++ A+VW
Sbjct: 384 KKEDDDESLVLTWKGHSVVFATVW 407


>AT3G13840.1 | Symbols:  | GRAS family transcription factor |
           chr3:4555305-4556837 REVERSE LENGTH=510
          Length = 510

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 111/287 (38%), Gaps = 20/287 (6%)

Query: 104 LLMAAAEALTGANKSHDLARAILIRLKELVSHTANTNMERLAAYFTXXXXXXXXXXXXXH 163
           LL   A A+T +N S    +  L  L EL S + + N  RLAA+                
Sbjct: 148 LLNPCALAITASNSSR--VQHYLCVLSELASSSGDAN-RRLAAFGLRALQHHLSSSSVSS 204

Query: 164 NLNKNSVVAGPHREDPQTDMLAAFQLLQDMSPYIKFAHFTANQAILEAVAHE----RRVH 219
           +       A    +  Q  +L  +++    SP+    +  AN AIL+ +A +    + +H
Sbjct: 205 SFWPVFTFASAEVKMFQKTLLKFYEV----SPWFALPNNMANSAILQILAQDPKDKKDLH 260

Query: 220 IIDFDVSEGAQWASLIQALSSRKDGPSGPHLRITALXXXXXXXXXXXXIATVQETGRRLT 279
           IID  VS G QW +L++ALS R +GP  P +RIT +                   G +L 
Sbjct: 261 IIDIGVSHGMQWPTLLEALSCRLEGPP-PRVRITVISDLTADIPFSVGPPGYN-YGSQLL 318

Query: 280 AFAASVGQPFSFHQCRLDPDETFRTSSLKLVRGEALVFNCVLHLPHLNYRAPDSIASFLS 339
            FA S+    +     LD  +   TS       E L+      L HL +   D     L 
Sbjct: 319 GFARSL--KINLQISVLDKLQLIDTSP-----HENLIVCAQFRLHHLKHSINDERGETLK 371

Query: 340 GARELSPKLVTLAEEEVGPVGDAGFVGLFMDSLHRYSAMCDSLEAGF 386
             R L PK V L E        A F   F   L       DS  +GF
Sbjct: 372 AVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGF 418