Miyakogusa Predicted Gene

Lj0g3v0016699.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0016699.1 Non Chatacterized Hit- tr|I1N1V7|I1N1V7_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=3,92.86,0.0000000000004, ,1995_g.1
         (65 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65460.1 | Symbols: KCA2, KAC2 | kinesin like protein for act...    91   1e-19
AT5G10470.2 | Symbols: KAC1 | kinesin like protein for actin bas...    76   5e-15
AT5G10470.1 | Symbols: KCA1, KAC1 | kinesin like protein for act...    76   5e-15

>AT5G65460.1 | Symbols: KCA2, KAC2 | kinesin like protein for actin
            based chloroplast movement 2 | chr5:26161831-26169001
            REVERSE LENGTH=1264
          Length = 1264

 Score = 91.3 bits (225), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/65 (70%), Positives = 48/65 (73%)

Query: 1    MSLEEMKQVFXXXXXXXXXXXXXRTADGTRARYSRLYRTLATKVPSLRDLVSELEKGGAL 60
            MSLEEMKQVF             RTADGTRARYSRLYRTLA KVPSLRDLV ELEKGG L
Sbjct: 1199 MSLEEMKQVFGQLPEALSSLALARTADGTRARYSRLYRTLAMKVPSLRDLVGELEKGGVL 1258

Query: 61   KDVRT 65
            KD ++
Sbjct: 1259 KDTKS 1263


>AT5G10470.2 | Symbols: KAC1 | kinesin like protein for actin based
            chloroplast movement 1 | chr5:3290121-3297248 REVERSE
            LENGTH=1274
          Length = 1274

 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 41/55 (74%)

Query: 1    MSLEEMKQVFXXXXXXXXXXXXXRTADGTRARYSRLYRTLATKVPSLRDLVSELE 55
            MSLEEMKQ+F             RTADGTRARYSRLY+TLA KVPSL+DLVSELE
Sbjct: 1220 MSLEEMKQMFVQLPEALSLLALARTADGTRARYSRLYKTLAMKVPSLKDLVSELE 1274


>AT5G10470.1 | Symbols: KCA1, KAC1 | kinesin like protein for actin
            based chloroplast movement 1 | chr5:3290121-3297248
            REVERSE LENGTH=1273
          Length = 1273

 Score = 75.9 bits (185), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 41/55 (74%)

Query: 1    MSLEEMKQVFXXXXXXXXXXXXXRTADGTRARYSRLYRTLATKVPSLRDLVSELE 55
            MSLEEMKQ+F             RTADGTRARYSRLY+TLA KVPSL+DLVSELE
Sbjct: 1219 MSLEEMKQMFVQLPEALSLLALARTADGTRARYSRLYKTLAMKVPSLKDLVSELE 1273