Miyakogusa Predicted Gene

Lj0g3v0016679.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0016679.1 Non Chatacterized Hit- tr|C0PP28|C0PP28_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,87.18,0.000000000004,coiled-coil,NULL; seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL,gene.g1432.t1.1
         (365 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G65460.1 | Symbols: KCA2, KAC2 | kinesin like protein for act...   508   e-144
AT5G10470.2 | Symbols: KAC1 | kinesin like protein for actin bas...   504   e-143
AT5G10470.1 | Symbols: KCA1, KAC1 | kinesin like protein for act...   504   e-143

>AT5G65460.1 | Symbols: KCA2, KAC2 | kinesin like protein for actin
           based chloroplast movement 2 | chr5:26161831-26169001
           REVERSE LENGTH=1264
          Length = 1264

 Score =  508 bits (1309), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 273/384 (71%), Positives = 301/384 (78%), Gaps = 36/384 (9%)

Query: 1   METSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKKSVAGSPKLSSPSPRESVNAQP 60
           +++SAVTKKLEEELKKRDALIERLHEENEKLFDRLTEK SVA S ++SSPS + S   QP
Sbjct: 611 LDSSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEK-SVASSTQVSSPSSKASPTVQP 669

Query: 61  RDMGRNGTSNTTSQSMNVLPSPLATDKNDGTVALVKSDSEIVKTTPAGEYLTAALNDFDP 120
            D+   GT          LPS  + DKN+GT+ LVKS SE+VKTTPAGEYLTAALNDFDP
Sbjct: 670 ADVDSAGT----------LPS--SVDKNEGTITLVKSSSELVKTTPAGEYLTAALNDFDP 717

Query: 121 DQHEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIKKMEPKRVMDTML 180
           +Q+EG AAI+DGANKLLMLVLAAVIKAGASREHEILAEIRD+VFSFI+KMEP+RVMDTML
Sbjct: 718 EQYEGLAAIADGANKLLMLVLAAVIKAGASREHEILAEIRDSVFSFIRKMEPRRVMDTML 777

Query: 181 VSRVRILYIRSLLARSPELQSIKVLPVECFLEKXXXXXXXXXXXXXXXXXXXVQYVDEQI 240
           VSRVRILYIRSLLARSPELQSIKV PVE FLEK                   V+Y DEQI
Sbjct: 778 VSRVRILYIRSLLARSPELQSIKVSPVERFLEKPYTGRTRSSSGSSSPGRSPVRYYDEQI 837

Query: 241 QGFK-----------------------DIWRQQVTGGKLREITEEAKSFAIGNKALAALF 277
            GFK                       D  RQQVTGGKLREI +EAKSFAIGNK LAALF
Sbjct: 838 YGFKVNLKPEKKSKLVSVVSRIRGHDQDTGRQQVTGGKLREIQDEAKSFAIGNKPLAALF 897

Query: 278 VHTPAGELQRQIRSWLAENFDFLSVSGNDASEGSTGQLELLSTAIMDGWMAGLGAALPPH 337
           VHTPAGELQRQIRSWLAE+F+FLSV+ +D S  +TGQLELLSTAIMDGWMAG+GAA+PPH
Sbjct: 898 VHTPAGELQRQIRSWLAESFEFLSVTADDVSGVTTGQLELLSTAIMDGWMAGVGAAVPPH 957

Query: 338 TDALGQLLFEYSKRVYTSQLQHLK 361
           TDALGQLL EY+KRVYTSQ+QHLK
Sbjct: 958 TDALGQLLSEYAKRVYTSQMQHLK 981


>AT5G10470.2 | Symbols: KAC1 | kinesin like protein for actin based
           chloroplast movement 1 | chr5:3290121-3297248 REVERSE
           LENGTH=1274
          Length = 1274

 Score =  504 bits (1299), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/383 (67%), Positives = 297/383 (77%), Gaps = 28/383 (7%)

Query: 2   ETSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKKSVAGSPKLSSPSPRESVNAQPR 61
           ++S+VTKKLEEELKKRDALIERLHEENEKLFDRLTE+ S+A S ++ SPS R S N QP 
Sbjct: 622 DSSSVTKKLEEELKKRDALIERLHEENEKLFDRLTER-SMAVSTQVLSPSLRASPNIQPA 680

Query: 62  DMGRNGTSNTTSQSMNVLPSPLATDKNDGTVALVKSDSEIVKTTPAGEYLTAALNDFDPD 121
           ++   G       S   +  P   +KN+G + LVKS +++VKTTPAGEYLTAALNDFDP+
Sbjct: 681 NVNSRGEG----YSAEAVALPSTPNKNNGAITLVKSGTDLVKTTPAGEYLTAALNDFDPE 736

Query: 122 QHEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIKKMEPKRVMDTMLV 181
           ++EG AAI+DGANKLLMLVLAAVIKAGASREHEILAEIRD+VFSFI+KMEP+RVMDTMLV
Sbjct: 737 EYEGLAAIADGANKLLMLVLAAVIKAGASREHEILAEIRDSVFSFIRKMEPRRVMDTMLV 796

Query: 182 SRVRILYIRSLLARSPELQSIKVLPVECFLEKXXXXXXXXXXXXXXXXXXXVQYVDEQIQ 241
           SRVRILYIRSLLARSPELQ+I+V PVECFLEK                   V+Y+D QI 
Sbjct: 797 SRVRILYIRSLLARSPELQTIRVSPVECFLEKPNTGRSKSTSRGSSPGRSPVRYLDTQIH 856

Query: 242 GFK-----------------------DIWRQQVTGGKLREITEEAKSFAIGNKALAALFV 278
           GFK                       D  RQQVTG KLRE+ +EAKSFAIGNKALAALFV
Sbjct: 857 GFKVNIKAERRNKLASVVSRMRGLEQDAGRQQVTGVKLREMQDEAKSFAIGNKALAALFV 916

Query: 279 HTPAGELQRQIRSWLAENFDFLSVSGNDASEGSTGQLELLSTAIMDGWMAGLGAALPPHT 338
           HTPAGELQRQIR WLAENF+FLSV+ +D S G+ GQLELLSTAIMDGWMAGLGAA+PPHT
Sbjct: 917 HTPAGELQRQIRLWLAENFEFLSVTSDDVSGGNGGQLELLSTAIMDGWMAGLGAAVPPHT 976

Query: 339 DALGQLLFEYSKRVYTSQLQHLK 361
           DALGQLL EY+KRVYTSQ+QH+K
Sbjct: 977 DALGQLLSEYAKRVYTSQMQHMK 999


>AT5G10470.1 | Symbols: KCA1, KAC1 | kinesin like protein for actin
           based chloroplast movement 1 | chr5:3290121-3297248
           REVERSE LENGTH=1273
          Length = 1273

 Score =  504 bits (1299), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 260/383 (67%), Positives = 297/383 (77%), Gaps = 29/383 (7%)

Query: 2   ETSAVTKKLEEELKKRDALIERLHEENEKLFDRLTEKKSVAGSPKLSSPSPRESVNAQPR 61
           ++S+VTKKLEEELKKRDALIERLHEENEKLFDRLTE+ S+A S ++ SPS R S N QP 
Sbjct: 622 DSSSVTKKLEEELKKRDALIERLHEENEKLFDRLTER-SMAVSTQVLSPSLRASPNIQPA 680

Query: 62  DMGRNGTSNTTSQSMNVLPSPLATDKNDGTVALVKSDSEIVKTTPAGEYLTAALNDFDPD 121
           ++ R         S   +  P   +KN+G + LVKS +++VKTTPAGEYLTAALNDFDP+
Sbjct: 681 NVNRG-----EGYSAEAVALPSTPNKNNGAITLVKSGTDLVKTTPAGEYLTAALNDFDPE 735

Query: 122 QHEGHAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIKKMEPKRVMDTMLV 181
           ++EG AAI+DGANKLLMLVLAAVIKAGASREHEILAEIRD+VFSFI+KMEP+RVMDTMLV
Sbjct: 736 EYEGLAAIADGANKLLMLVLAAVIKAGASREHEILAEIRDSVFSFIRKMEPRRVMDTMLV 795

Query: 182 SRVRILYIRSLLARSPELQSIKVLPVECFLEKXXXXXXXXXXXXXXXXXXXVQYVDEQIQ 241
           SRVRILYIRSLLARSPELQ+I+V PVECFLEK                   V+Y+D QI 
Sbjct: 796 SRVRILYIRSLLARSPELQTIRVSPVECFLEKPNTGRSKSTSRGSSPGRSPVRYLDTQIH 855

Query: 242 GFK-----------------------DIWRQQVTGGKLREITEEAKSFAIGNKALAALFV 278
           GFK                       D  RQQVTG KLRE+ +EAKSFAIGNKALAALFV
Sbjct: 856 GFKVNIKAERRNKLASVVSRMRGLEQDAGRQQVTGVKLREMQDEAKSFAIGNKALAALFV 915

Query: 279 HTPAGELQRQIRSWLAENFDFLSVSGNDASEGSTGQLELLSTAIMDGWMAGLGAALPPHT 338
           HTPAGELQRQIR WLAENF+FLSV+ +D S G+ GQLELLSTAIMDGWMAGLGAA+PPHT
Sbjct: 916 HTPAGELQRQIRLWLAENFEFLSVTSDDVSGGNGGQLELLSTAIMDGWMAGLGAAVPPHT 975

Query: 339 DALGQLLFEYSKRVYTSQLQHLK 361
           DALGQLL EY+KRVYTSQ+QH+K
Sbjct: 976 DALGQLLSEYAKRVYTSQMQHMK 998