Miyakogusa Predicted Gene
- Lj0g3v0014579.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0014579.1 Non Chatacterized Hit- tr|I1JGH6|I1JGH6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,66.59,0,RING/U-box,NULL; ARM repeat,Armadillo-type fold; Modified
RING finger domain,U box domain; U-box,U b,CUFF.783.1
(422 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 317 1e-86
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 303 1e-82
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 280 1e-75
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 150 1e-36
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 143 2e-34
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 135 4e-32
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 124 1e-28
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 113 2e-25
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 94 3e-19
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 93 3e-19
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 90 4e-18
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 89 8e-18
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 88 1e-17
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 88 1e-17
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 84 2e-16
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 84 2e-16
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 80 3e-15
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 80 4e-15
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 79 6e-15
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 79 6e-15
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 77 2e-14
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 74 3e-13
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 74 3e-13
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 74 3e-13
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 73 4e-13
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 73 4e-13
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 72 6e-13
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 72 7e-13
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 72 1e-12
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 70 4e-12
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 69 4e-12
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 68 1e-11
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 68 1e-11
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 68 1e-11
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 68 1e-11
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 67 2e-11
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 67 2e-11
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 67 3e-11
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 67 3e-11
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 67 3e-11
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 66 4e-11
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 66 4e-11
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 66 5e-11
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 65 8e-11
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 64 1e-10
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 64 3e-10
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 64 3e-10
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 64 3e-10
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 62 6e-10
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 62 6e-10
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 62 7e-10
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 62 7e-10
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 62 8e-10
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 61 2e-09
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 61 2e-09
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 60 2e-09
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 60 3e-09
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 60 3e-09
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 59 8e-09
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 58 1e-08
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 1e-08
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 58 1e-08
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 55 8e-08
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 261/449 (58%), Gaps = 54/449 (12%)
Query: 2 DNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPR 61
+ E+E+P YFICPISL+IMKDPVT ++GITYDR +I +WL +CPVTKQPLP
Sbjct: 19 EEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL-----EKVPSCPVTKQPLPL 73
Query: 62 DFDLTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPRDPNLQ 121
D DLTPNH LRRLIQ WC N G+ RI TP+ P K V ++ ++ +
Sbjct: 74 DSDLTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNL--KKFGQEALGR 131
Query: 122 HKTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIK----EGLEEALSLLQF 177
+TL +LE+LA NR+ + E GV K++++F+V C + + +GL+E+L LL
Sbjct: 132 EETLQKLEVLAMDGN-NRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHL 190
Query: 178 VKVPTEEAMLILSEDDHQILDSLTWVLALPSDQIRNSIAVKSHAVLALKKLVHKGGPGVL 237
+ +P+ +A IL E+D ++++SLTWVL + K++ ++ L+ L ++
Sbjct: 191 IGIPSNDAKTILMEND-RVMESLTWVLH------QEDFLSKAYTIVLLRNLTEYTSSHIV 243
Query: 238 ERLNLEFFERIVKILRN----------------------------------GAITQQGTR 263
ERLN E F+ I+ L++ + +Q
Sbjct: 244 ERLNPEIFKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVT 303
Query: 264 ASLQVMLSACPWGRNRFMMVEAGAVFNLIEIELT-APEKKITELVVTILFHLCTCADGRA 322
A+L ++L W RNR ++V+ GAV LIE+E++ EK+ITEL++ +L LC CA+GRA
Sbjct: 304 AALMILLETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRA 363
Query: 323 QFLSHEGSIAVVTERLLKVSAAVDDKVMFVLALVSQFSATNGVLQEMLRVGTVSKLFMLL 382
+ L+H G IAVVT+RLL+VS A DD+ + +L VS+FS N V++EM+ VGTV KL +L
Sbjct: 364 EILAHRGGIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVL 423
Query: 383 QGDHAKYLKDKAMEIIRAHSKVWKNSPCF 411
D LK+KA EI++ H WK PC
Sbjct: 424 GMDCGLNLKEKAKEILKDHFDEWKKFPCI 452
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 303 bits (776), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/420 (40%), Positives = 261/420 (62%), Gaps = 31/420 (7%)
Query: 1 MDNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLP 60
MD E+E+P +F+CPISL+IMKDPV TGITYDRDSIE+WL + K + +CPVTKQ +
Sbjct: 6 MDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKN---SCPVTKQDI- 61
Query: 61 RDFDLTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPRDPNL 120
D DLTPNHTLRRLIQ WCTLNA+ G++RIPTP+ P+ K+++ E+ RD
Sbjct: 62 TDADLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEI---------EKLIRDSAS 112
Query: 121 QH----KTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGLEEALSLLQ 176
H K L +L + +++ N++CL +GVP+ + + + G + + EAL+LL
Sbjct: 113 SHENQVKCLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTD---EALNLLY 169
Query: 177 FVKVP-TEEAMLILSEDDHQILDSLTWVLALPSDQIRNSIAVKSHAVLALKKLVHKGGPG 235
++ T L+ ++ D+ I+ SLT ++ R + +A L LK ++ P
Sbjct: 170 HLETSETVLKNLLNNKKDNNIVKSLTKIMQ------RGMYESRVYATLLLKNILEVADPM 223
Query: 236 VLERLNLEFFERIVKILRNGAITQQGTRASLQVMLSACPWGRNRFMMVEAGAVFNLIEI- 294
L E F +V+IL + I+Q+ T+A++ ++++ CPWGRNR VEAG + +IE+
Sbjct: 224 QSMTLKPEVFTEVVQIL-DDRISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELL 282
Query: 295 --ELTAPEKKITELVVTILFHLCTCADGRAQFLSHEGSIAVVTERLLKVSAAVDDKVMFV 352
E E++ E+ + +L LC CA+GRA+FL+H +IAVV +++L+VS D+ + V
Sbjct: 283 MDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRV 342
Query: 353 LALVSQFSATNGVLQEMLRVGTVSKLFMLLQGDHAKYLKDKAMEIIRAHSKVWKNSPCFP 412
L V +F AT +L EML++G V+KL ++LQ K+KA E+++ H++VWK+SPC P
Sbjct: 343 LLSVGRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLP 402
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 266/445 (59%), Gaps = 52/445 (11%)
Query: 1 MDNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLP 60
MD E+E+P +F+CPISL IMKDPV TGITYDR+SIE+WL S K + +CPVTKQ +
Sbjct: 1 MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKN---SCPVTKQVIT 57
Query: 61 RDFDLTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPRDPNL 120
+ DLTPNHTLRRLIQ WCTLNA+ GI+RIPTPK P+ K+++ +E +L
Sbjct: 58 -ETDLTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLI------KESSSSHL 110
Query: 121 -QHKTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVS---------------------C 158
Q K L +L + +++ N++CL + VP+ L IVS C
Sbjct: 111 NQVKCLKRLRQIVSENTTNKRCLEAAEVPE-FLANIVSNSVDTYNSPSSSLSSSNLNDMC 169
Query: 159 ------FRKGQIKEGLEEALSLLQFVKVPTEEAM--LILSEDDHQILDSLTWVLALPSDQ 210
R + ++EALS+L + +E A+ L+ ++ ++ +LT ++
Sbjct: 170 QSNMLENRFDSSRSLMDEALSVLYHLDT-SETALKSLLNNKKGTNLVKTLTKIMQ----- 223
Query: 211 IRNSIAVKSHAVLALKKLVHKGGPGVLERLNLEFFERIVKILRNGAITQQGTRASLQVML 270
R +++A L LKKL+ P + L E F +++IL + I+ + TR+++Q+++
Sbjct: 224 -RGIYESRAYAALLLKKLLEVADPMQIILLERELFGEVIQILHD-QISHKATRSAMQILV 281
Query: 271 SACPWGRNRFMMVEAGAVFNLIEI---ELTAPEKKITELVVTILFHLCTCADGRAQFLSH 327
CPWGRNR VE G + +IE+ + + E++ +E+ + +L LC CA+GRA+FL+H
Sbjct: 282 ITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNH 341
Query: 328 EGSIAVVTERLLKVSAAVDDKVMFVLALVSQFSATNGVLQEMLRVGTVSKLFMLLQGDHA 387
+IAVV++++L+VS ++ + VL V +F AT +LQEML++G V+KL ++LQ
Sbjct: 342 GAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCG 401
Query: 388 KYLKDKAMEIIRAHSKVWKNSPCFP 412
K+KA E+++ H++VW+ SPC P
Sbjct: 402 NKTKEKAKELLKLHARVWRESPCVP 426
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 207/421 (49%), Gaps = 22/421 (5%)
Query: 1 MDNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLP 60
+D +++P +F CPISL++M+DPVT TG TYDR SIE W+ N TCPVT+ PL
Sbjct: 8 LDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNN---TTCPVTRAPL- 63
Query: 61 RDFDLTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPR-DPN 119
DF L PNHTLRRLIQ WC N + G++RIPTPK P + T V
Sbjct: 64 SDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVR 123
Query: 120 LQHKTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGLEEALSLLQFVK 179
+ L +L A S++NR L+ + +L+ I+ F + E + E+L+LL +
Sbjct: 124 SRAAALRRLRGFARDSDKNR-VLIAAHNATEILIKIL--FSETTSSELVSESLALLVMLP 180
Query: 180 VPTEEAMLILSEDDHQILDSLTWVLALPSDQIR-NSIAVKSHAVLALKKLVHKGGPGVLE 238
+ + +S D ++ + LT +L S + R N+ A+ K KG E
Sbjct: 181 ITEPNQFVSISSDPGRV-EFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSE 239
Query: 239 RLNLEFFERIVKILRNGAITQQGTRASLQVMLSACPWGRNRFMMVEAGAVFNLIEIELTA 298
+ FE ++ +LRN +++ + ++ + + C R + + AGA LI+
Sbjct: 240 SV----FEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAAD 295
Query: 299 PEKKITELVVTILFHLCTCADGRAQFLSHEGSIAVVTERLLKVSAAVDDKVMFVLALVSQ 358
++ TE + + LC +G A F H ++ ++ + +L+VS + AL++
Sbjct: 296 FDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAG--ALLAL 353
Query: 359 FSATNGVLQEMLRVGTVSKLFMLLQGDHAKYLKDKAMEIIRAHSKVWKNSPCFPDPSSYA 418
+A +E G V +L +++Q + + K KA ++++ W PD +S+A
Sbjct: 354 CTAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSW------PDYNSFA 407
Query: 419 S 419
+
Sbjct: 408 N 408
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 207/428 (48%), Gaps = 46/428 (10%)
Query: 4 EVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDF 63
E+ +P F CPIS ++MKDPV +GITYDR++IE+W S + TCPVT L
Sbjct: 30 EITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESG----YQTCPVTNTVLT-SL 84
Query: 64 DLTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPRDPNLQHK 123
+ PNHT+RR+IQGWC + GI+RIPTP+ P+ QV D +
Sbjct: 85 EQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACME 144
Query: 124 TLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGLEEALSLLQFVKVPTE 183
+ ++ L +SERNRKC+ E+G A L+ V CF E +L L + V V T
Sbjct: 145 MVTKMTRLGKESERNRKCVKENG---AGLVLCV-CF--DAFSENANASLLLEETVSVLT- 197
Query: 184 EAMLILSEDDHQILDSLTWVLALPSDQIRNSIAVKSHAVLALKKLVHKGGPGVLERLNLE 243
ML + + L + + L + +RN +A +K+L+ LN+
Sbjct: 198 -WMLPIGLEGQSKLTTTSSFNRLV-ELLRNG---DQNAAFLIKELLE---------LNVT 243
Query: 244 FFERIVKILRNG-------AITQQGTRA----SLQVMLSACPWGRNRFMMVEAGAVFNLI 292
+ KI NG +I + T S+ M+ +RF+ ++ + N+
Sbjct: 244 HVHALTKI--NGVQEAFMKSINRDSTCVNSLISIHHMILTNQETVSRFLELD---LVNIT 298
Query: 293 EIELTAPEKKITELVVTILFHLCTCADGRAQFLSHEGSIAVVTERLLKVSAAVDDKVMFV 352
L E + E +T+L +C +GR + ++ I ++ +++LK+S D ++ V
Sbjct: 299 VEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSV 356
Query: 353 LALVSQFSATNGVLQEMLRVGTVSKLFMLLQGDHAKYLKDKAMEIIRAHSKVWKNSPCFP 412
+ V + S ++E LR+G KL ++LQ + K+K E+++ +KV K + F
Sbjct: 357 MWKVCK-SGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMNG-FV 414
Query: 413 DPSSYASL 420
D S +S+
Sbjct: 415 DRSYSSSI 422
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 194/408 (47%), Gaps = 34/408 (8%)
Query: 2 DNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPR 61
++E+ +P F CPIS+ +MKDPV TGITYDR SIE W+ N + TCPVT L
Sbjct: 26 ESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWI----NSGNKTCPVTNTVL-T 80
Query: 62 DFDLTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPRDPNLQ 121
FD PNHT+R++IQGWC + I RIPTP+ PL +V D
Sbjct: 81 TFDQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKC 140
Query: 122 HKTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEG----LEEALSLLQF 177
+ +++ L +SE+NRKC+ E+ V + CF K E L E LSLL +
Sbjct: 141 GVIIEKIKKLGDESEKNRKCVNENSVG----WVLCDCFDKFSGDEKLTFMLNEILSLLTW 196
Query: 178 V-KVPTEEAMLILSEDDHQILDSLTWVLALPSDQIRNSIAVKSHAVLALKKL-VHKGG-- 233
+ + E + S + + L L D +R + A +L+L + VH
Sbjct: 197 MFPIGLEGISKLASATSFRCVAGL---LKSTDDSVRQNAAFIMKEILSLDETRVHSFAVE 253
Query: 234 PGVLERLNLEFFERIVKILRNGAITQQGTRASLQV--MLSACPWGRNRFMMVEAGAVFNL 291
GV E L VK++R+ + + + + M+ P + F+ E G V
Sbjct: 254 NGVAEAL--------VKLIRDSVSSSSTKSSLIAIYQMVLQKPEIASEFL--EIGLVSIT 303
Query: 292 IEIELTAPEKKITELVVTILFHLCTCADGRAQFLSHEGSIAVVTERLLKVSAAVDDKVMF 351
+E+ + A E + E + +L +C GR + + + ++ +++ KVS M
Sbjct: 304 VEMIVDA-ENSVCEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMS 362
Query: 352 VLALVSQFSATNGVLQEMLRVGTVSKLFMLLQGDHAKYLKDKAMEIIR 399
++ + + T V ++ +R+G K+ ++LQ + + K+KA E+++
Sbjct: 363 MILKLWKTGNTVAV-EDAVRLGAFQKVLLVLQVGYGEETKEKATELLK 409
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 196/424 (46%), Gaps = 26/424 (6%)
Query: 1 MDNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLP 60
+D +++P +F CPISL +M DPVT TG TYDR SI+ W+ + TCPVT+ L
Sbjct: 8 LDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMG----NTTCPVTRVALS 63
Query: 61 RDFDLTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPR-DPN 119
DF L PNHTLRRLIQ WC N + G++RIPTPK P + V
Sbjct: 64 -DFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVR 122
Query: 120 LQHKTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGLEEALSLLQFVK 179
+ + +L LA SE+NR + + ++ + + + L L +
Sbjct: 123 SRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLL 182
Query: 180 VPTEEAMLILSEDDHQILDSLTWVLALPSDQIRNSIAVKSHAVLALKKLVHKGGPGVLER 239
TE ++ D ++ +T +L S +IR + A AL ++V G + +
Sbjct: 183 HMTETECEAVASDPSRV-GFMTRLLFDSSIEIRVNAA-------ALIEMVLTGAKSMDLK 234
Query: 240 LNL----EFFERIVKILRNGAITQQGTRASLQVMLSACPWGRNRFMMVEAGAVFNLIEIE 295
L + FE ++ +L+N +++ + ++ + + C + R + + AGA LI+
Sbjct: 235 LIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRL 294
Query: 296 LTAPEKKITELVVTILFHLCTCADGRAQFLSHEGSIAVVTERLLKVSAAVDDKVMFVLAL 355
++ TE + + LC +G A F H ++ ++ + +L+VS + AL
Sbjct: 295 AADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAG--AL 352
Query: 356 VSQFSATNGVLQEMLRVGTVSKLFMLLQGDHAKYLKDKAMEIIRAHSKVWKNSPCFPDPS 415
++ +A E G V++L +L+Q D + K KA +++ W PD S
Sbjct: 353 LALCTAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSW------PDDS 406
Query: 416 SYAS 419
+ S
Sbjct: 407 TVHS 410
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 194/428 (45%), Gaps = 62/428 (14%)
Query: 4 EVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDF 63
E+ +P F CPIS ++MKDP W S + TCPVT L
Sbjct: 30 EITIPSQFQCPISYELMKDP----------------WFESG----YQTCPVTNTVLT-SL 68
Query: 64 DLTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPRDPNLQHK 123
+ PNHT+RR+IQGWC + GI+RIPTP+ P+ QV D +
Sbjct: 69 EQIPNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACME 128
Query: 124 TLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGLEEALSLLQFVKVPTE 183
+ ++ L +SERNRKC+ E+G A L+ V CF E +L L + V V T
Sbjct: 129 MVTKMTRLGKESERNRKCVKENG---AGLVLCV-CF--DAFSENANASLLLEETVSVLT- 181
Query: 184 EAMLILSEDDHQILDSLTWVLALPSDQIRNSIAVKSHAVLALKKLVHKGGPGVLERLNLE 243
ML + + L + + L + +RN +A +K+L+ LN+
Sbjct: 182 -WMLPIGLEGQSKLTTTSSFNRLV-ELLRNG---DQNAAFLIKELLE---------LNVT 227
Query: 244 FFERIVKILRNG-------AITQQGTRA----SLQVMLSACPWGRNRFMMVEAGAVFNLI 292
+ KI NG +I + T S+ M+ +RF+ ++ + N+
Sbjct: 228 HVHALTKI--NGVQEAFMKSINRDSTCVNSLISIHHMILTNQETVSRFLELD---LVNIT 282
Query: 293 EIELTAPEKKITELVVTILFHLCTCADGRAQFLSHEGSIAVVTERLLKVSAAVDDKVMFV 352
L E + E +T+L +C +GR + ++ I ++ +++LK+S D ++ V
Sbjct: 283 VEMLVDSENSVCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSV 340
Query: 353 LALVSQFSATNGVLQEMLRVGTVSKLFMLLQGDHAKYLKDKAMEIIRAHSKVWKNSPCFP 412
+ V + S ++E LR+G KL ++LQ + K+K E+++ +KV K + F
Sbjct: 341 MWKVCK-SGDGSEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMMNKVMKMNG-FV 398
Query: 413 DPSSYASL 420
D S +S+
Sbjct: 399 DRSYSSSI 406
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 184/408 (45%), Gaps = 37/408 (9%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
+ VP +F CPISL +M+ PV+ TG+TYDR SI++WL N TCP T Q L + D
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNN----TCPATMQ-LLKTKD 64
Query: 65 LTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPRDPNLQHKT 124
PN TL+RLI W P P + ER + +
Sbjct: 65 FVPNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERL-----MSLEN 119
Query: 125 LMQLELLAAQSERNRKCLVESG--VPKAVLMFIVSCFRKGQIK-EGLEEALSLLQFVKVP 181
LM++ S+ NR+ L + VP +V R + K E + A+ +L +KV
Sbjct: 120 LMKIVRFVKDSDSNREFLSKKMEFVP-----MLVDIIRTKKTKIELVIMAIRILDSIKVD 174
Query: 182 TEE-AMLILSEDDHQILDSLTWVLALPSDQIRNSIAVKSHAVLALKKLVHKGGPGVLERL 240
E + L+L+ D L ++ +LA+ + + I +S VL K + ER
Sbjct: 175 RERLSNLMLANDGGDCLTAI--LLAIQRGNLESKI--ESVRVLDWISFDAKSKLMIAERD 230
Query: 241 NLEFFERIVKILRNGAITQQG----TRASLQVMLSACPWGRNRFMMVEAGAVFNLIEIEL 296
+ + +++++ +IT+ ASL +++ R R ++ A A+ + +I L
Sbjct: 231 GV-----LTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILL 285
Query: 297 TA--PEKKITELVVTILFHLCTCADGRAQFLSHEGSIAV--VTERLLKVS-AAVDDKVMF 351
T +TE + +L L + +GR + + V V ++LLKVS A + V
Sbjct: 286 TETLTNVAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTI 345
Query: 352 VLALVSQFSATNGVLQEMLRVGTVSKLFMLLQGDHAKYLKDKAMEIIR 399
+ L F V + + R V+KL +++Q + + ++ A ++I+
Sbjct: 346 LWCLCYVFREDKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIK 393
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 178/396 (44%), Gaps = 51/396 (12%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLT 66
VP +F CPISL +MK PV+ TG+TYDR SI++WL N TCP T Q L ++ +
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNN----TCPATMQIL-QNKEFV 65
Query: 67 PNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKT----QVXXXXXXXXXEREPRDPNLQH 122
PN TL RLI W + I+R +SP + T ++ E + R L+
Sbjct: 66 PNLTLHRLIDHW-----SDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILR- 119
Query: 123 KTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGL--EEALSLLQFVKV 180
A +S+ NR+ L A+L+ ++S R + L EA+ +L ++
Sbjct: 120 --------FARESDENREFLAGKDDFVAMLVDLISDSRNFSDSQLLLVGEAVKILSMIRR 171
Query: 181 PTEE----AMLILSEDDHQILDSLTWVLAL-----PSDQIRNSIAVKSHAVLALKKLVHK 231
+ + LIL+ D LT L P +I S ++ AV A KL+
Sbjct: 172 KIFDRRRLSNLILTNGG----DCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIA 227
Query: 232 GGPGVLERLNLEFFERIVKILRNGAITQQGTRASLQVMLSACPWGRNRFMMVEAGAVFNL 291
G G++ I+K++ + A+L ++++ R + ++ V L
Sbjct: 228 KGEGLV--------TEIIKLI-SSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKL 278
Query: 292 IEIELTAPEK--KITELVVTILFHLCTCADGRAQFLSHEGSIAVVTERLLKVSAAVDDKV 349
+ LT P +TE + +L + +C +GR++ + + V +L+KVS A +
Sbjct: 279 TSL-LTDPTTSVSVTEKCLKLLEAISSCKEGRSE-ICDGVCVETVVNKLMKVSTAATEHA 336
Query: 350 MFVLALVSQFSATNGVLQEMLRVGTVSKLFMLLQGD 385
+ VL V ++R+ V+K+ +LLQ +
Sbjct: 337 VTVLWSVCYLFKEKKAQDAVIRINGVTKILLLLQSN 372
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 185/406 (45%), Gaps = 55/406 (13%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
+ VP +F CPISL +MK PV+ TG+TYDR SI++WL N TCP T Q L ++ D
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNN----TCPATMQIL-QNKD 62
Query: 65 LTPNHTLRRLIQGW--------CTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPR 116
PN TL+RLI+ W C +A L PT + ++ E+E R
Sbjct: 63 FIPNRTLQRLIEIWSDSVRRRTCVESAELA---APT------RDEIADAIDRVKIEKEER 113
Query: 117 DPNLQHKTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIK-EGLEEALSLL 175
D + L ++ +S+ NR L +L+ +++ Q+ E A SL+
Sbjct: 114 D---DREVLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLIN-----QVDFETTSAAKSLV 165
Query: 176 QFVKVPTEEAMLILSEDDHQILDSLTWV-LALPSDQIRNSIAVKSHAVLALKKLVHKGGP 234
+EA+ ILS ++ D + L L + + R S+ V ++ +
Sbjct: 166 ------VQEAVKILSTIRSKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVE--LKIDCA 217
Query: 235 GVLERLNLEFFERIVKILRNGAITQ-----------QGTRASLQVMLSACPWGRNRFMMV 283
G+LE + ++ +++ R+G IT+ +SL +++ R + ++
Sbjct: 218 GLLEFIAVDAESKLLIAERDGLITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLL 277
Query: 284 EA---GAVFNLIEIELTAPEKKITELVVTILFHLCTCADGRAQFLSHEGS-IAVVTERLL 339
G V L+ ++ +TE + +L L + +GR++ +G + V ++L+
Sbjct: 278 REKLIGDVTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLM 337
Query: 340 KVSAAVDDKVMFVLALVSQFSATNGVLQEMLRVGTVSKLFMLLQGD 385
KVS A + + VL VS + L+ + V V+K+ +LLQ +
Sbjct: 338 KVSTAATEHAVTVLWSVSYLFKEDKALEAVTSVNGVTKILLLLQSN 383
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 139/341 (40%), Gaps = 69/341 (20%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLT 66
+P F CPISL++M+DPV +G TY+R IE+W+ H+TCP T+Q L LT
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWI----EGGHSTCPKTQQAL-TSTTLT 310
Query: 67 PNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXER--------EPRDP 118
PN+ LR LI WC N P P S L +V + +P
Sbjct: 311 PNYVLRSLIAQWCEANDI----EPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNP 366
Query: 119 NLQHKTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGLEEALSLLQFV 178
Q ++ LLA ++ NR + E+G A+ LL
Sbjct: 367 EDQRSAAGEIRLLAKRNADNRVAIAEAG------------------------AIPLL--- 399
Query: 179 KVPTEEAMLILSEDDHQILD-SLTWVLALPSDQIRNSIAVKSHAVLALKKLVHKGGPGVL 237
+ +LS D +I + S+T +L L + V + A+ + +++ KG
Sbjct: 400 -------VGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEAR 452
Query: 238 ERLNLEFF------ERIVKILRNGAI----------TQQGTRASLQVMLSACPWGRNRFM 281
E F E V I GAI TQ+G + + + + C + N+
Sbjct: 453 ENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGK 512
Query: 282 MVEAGAVFNLIEIELTAPEKKITELVVTILFHLCTCADGRA 322
+ AG + L + LT P + + + IL L + +G+A
Sbjct: 513 AIRAGVIPTLTRL-LTEPGSGMVDEALAILAILSSHPEGKA 552
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 34/328 (10%)
Query: 3 NEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRD 62
+++ +P F+CP+SL++MKDPV TG TY+R I++W+ + + TCP T+Q L +
Sbjct: 237 DKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWI----DCGNLTCPKTQQKL-EN 291
Query: 63 FDLTPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLN---KTQVXXXXXXXXXER-EPRDP 118
F LTPN+ LR LI WC + I P +N K +R R
Sbjct: 292 FTLTPNYVLRSLISRWCAEH------NIEQPAGYINGRTKNSGDMSVIRALVQRLSSRST 345
Query: 119 NLQHKTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGLEEALSLLQFV 178
+ + ++ L+ +S NR + E+G ++ + S Q E A++ + +
Sbjct: 346 EDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQ-----ENAITCVLNL 400
Query: 179 KVPTEEAMLILSEDDHQILDSLTWVLALPSDQIR-NSIAVKSHAVLALKKLVHKGGPGVL 237
+ LI+ + S+ VL + + R N+ A LA + + GG G +
Sbjct: 401 SIYENNKELIMF---AGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAI 457
Query: 238 ERLNLEFFERIVKILRNGAITQQGTRASLQVMLSACPWGRNRFMMVEAGAVFNLIEIELT 297
L V +L NG T +G + + + + C + N+ V AG V L+++
Sbjct: 458 PAL--------VDLLENG--TPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSD 507
Query: 298 APEKKITELVVTILFHLCTCADGRAQFL 325
+ ++ + +TIL L D ++ +
Sbjct: 508 STRHRMVDEALTILSVLANNQDAKSAIV 535
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 139/346 (40%), Gaps = 74/346 (21%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P+ F CPISL++M DPV +G TY+R+ I++WL H TCP T++ L D +TP
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWL----EGGHLTCPKTQETLTSDI-MTP 311
Query: 68 NHTLRRLIQGWCTLNAALGIDRIPTPKSP-LNKTQVXXXXXXXXXERE------------ 114
N+ LR LI WC N I PK P +++ + E
Sbjct: 312 NYVLRSLIAQWCESNG------IEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLT 365
Query: 115 PRDPNLQHKTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGLEEALSL 174
+ P + ++ LLA Q+ NR + SG
Sbjct: 366 SQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGA--------------------------- 398
Query: 175 LQFVKVPTEEAMLILSEDDHQILDSLTWVLALP-SDQIRNSIAVKSHAVLALKKLVHKGG 233
+P +L +S D ++T +L L + + I S AV + ++ KG
Sbjct: 399 -----IPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGS 453
Query: 234 PGVLERLNLEFF------ERIVKILRNGAI----------TQQGTRASLQVMLSACPWGR 277
E F E V I GAI +Q+G + + + + C +
Sbjct: 454 MEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQG 513
Query: 278 NRFMMVEAGAVFNLIEIELTAPEKKITELVVTILFHLCTCADGRAQ 323
N+ V AG V L+ + LT PE + + ++IL L + DG+++
Sbjct: 514 NKGKAVRAGLVPVLMRL-LTEPESGMVDESLSILAILSSHPDGKSE 558
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 18/149 (12%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLT 66
+P+YF CPISL++MKDPV TG TY+R SI++WL + H TCP +++ L LT
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL----DAGHKTCPKSQETLLH-AGLT 302
Query: 67 PNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXX--------XXXEREPRDP 118
PN+ L+ LI WC N GI+ +P + T++ E+
Sbjct: 303 PNYVLKSLIALWCESN---GIE-LPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGT 358
Query: 119 NLQHKTLM-QLELLAAQSERNRKCLVESG 146
Q + +L LLA ++ NR C+ E+G
Sbjct: 359 TEQQRAAAGELRLLAKRNVDNRVCIAEAG 387
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 162/392 (41%), Gaps = 35/392 (8%)
Query: 6 EVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDL 65
++P F CPISL+IM DPV +G T+DR SI+QW+ S + TCP+TK PL L
Sbjct: 4 DLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSG----NRTCPITKLPLSETPYL 59
Query: 66 TPNHTLRRLIQGWCTLNAALGIDRIPTPKSPLNKTQVXXXXXXXXXEREPRDPNLQHKTL 125
PNH LR LI + A + + P++ + + + ++L
Sbjct: 60 IPNHALRSLILNF----AHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESL 115
Query: 126 MQLELLAAQSERNRKCLVESGVPKAVLMFIVSCFRKGQIKEGLEEALSLLQFVKVPTEEA 185
+L L + R+ + ESG +A L + SC + L+E L ++
Sbjct: 116 TRLVRLTKRDSSIRRKVTESGAVRAALDCVDSC------NQVLQEKSLSLLLNLSLEDDN 169
Query: 186 MLILSEDDHQILDSLTWVLALPSDQIRNSIA--VKSHAVLALKKLVHKGGPGVLERLNLE 243
+ L D ++ + VL + S + A + S AV+ + K P + L
Sbjct: 170 KVGLVADG--VIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISAL--- 224
Query: 244 FFERIVKILRNGAITQQGTRASLQVMLSACPWGRNRFMMVEAGAVFNLIEIELTAPEKKI 303
V +LR G + + S + + C + NR +V+ G+V L+E + E+
Sbjct: 225 -----VSLLRVG--NDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSGLER-- 275
Query: 304 TELVVTILFHLCTCADGRAQFLSHEGSIAVVTERLLKVSAAVDDKVMFVLALVSQFSATN 363
V +L L C GR + G + V+ L + +F+L + S
Sbjct: 276 ---AVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGE- 331
Query: 364 GVLQEMLRVGTVSKLFMLLQGDHAKYLKDKAM 395
++ E+ R G V F + K ++ +
Sbjct: 332 -IVDEVKREGVVEICFGFEDNESEKIRRNATI 362
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 3 NEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRD 62
+ + +P+ F+CPISL++MKDP TG TY+R I++W+ + + +CP T+Q L +
Sbjct: 91 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI----DCGNLSCPKTQQKL-EN 145
Query: 63 FDLTPNHTLRRLIQGWCT 80
F LTPN+ LR LI WCT
Sbjct: 146 FTLTPNYVLRSLISQWCT 163
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 3 NEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRD 62
+ + +P+ F+CPISL++MKDP TG TY+R I++W+ + + +CP T+Q L +
Sbjct: 239 DNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWI----DCGNLSCPKTQQKL-EN 293
Query: 63 FDLTPNHTLRRLIQGWCT 80
F LTPN+ LR LI WCT
Sbjct: 294 FTLTPNYVLRSLISQWCT 311
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 2 DNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPR 61
D + VP+ F+CPISL +M DPV TG TYDR+SI +W+ H TCP T Q L
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWI----EEGHCTCPKTGQML-M 354
Query: 62 DFDLTPNHTLRRLIQGWCT 80
D + PN L+ LI WCT
Sbjct: 355 DSRIVPNRALKNLIVQWCT 373
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 10/141 (7%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLT 66
+P F+CPI+L+IM DPV TG TY+++SI++W + H TCP T+Q L L
Sbjct: 290 LPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWF----DAGHKTCPKTRQELDH-LSLA 344
Query: 67 PNHTLRRLIQGWCTLNAALGIDRIPTPK-SPLNKTQVXXXXXXXXXEREPRDPNLQHKTL 125
PN L+ LI WC N +IP + SP ++ + Q +++
Sbjct: 345 PNFALKNLIMQWCEKNNF----KIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSV 400
Query: 126 MQLELLAAQSERNRKCLVESG 146
Q+ LLA ++ NR + +G
Sbjct: 401 KQMRLLARENPENRVLIANAG 421
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
Query: 6 EVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDL 65
E+P FICPISL+ M+DPVT TG TY+R +I +W N H TCP T Q L D +
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWF----NIGHCTCPTTMQELWDDL-V 113
Query: 66 TPNHTLRRLIQGW 78
TPN TL +LI W
Sbjct: 114 TPNKTLHQLIYTW 126
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Query: 3 NEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRD 62
++ +P F CPI+L++M+DPV TG TYDR+SI+ W+ S H TCP T Q L +
Sbjct: 270 SDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSG----HNTCPKTGQVL-KH 324
Query: 63 FDLTPNHTLRRLIQGWC 79
L PN L+ LI WC
Sbjct: 325 TSLVPNRALKNLIVLWC 341
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P+ CPISLQ+M DPV +G TY+R IE+W + H TCP T+Q LP LTP
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWF----SDGHNTCPKTQQQLPH-ISLTP 327
Query: 68 NHTLRRLIQGWCTLNA 83
N+ ++ LI WC N
Sbjct: 328 NNCVKGLIASWCEQNG 343
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P+ CPISLQ+M DPV +G TY+R IE+W + H TCP T+Q LP LTP
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWF----SDGHNTCPKTQQQLPH-ISLTP 327
Query: 68 NHTLRRLIQGWCTLNA 83
N+ ++ LI WC N
Sbjct: 328 NNCVKGLIASWCEQNG 343
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 6 EVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDL 65
++P FICPISL+ M+DPVT TG TY+R +I +W N H TCP T Q L D +
Sbjct: 63 DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWF----NLGHLTCPTTMQELWDD-TV 117
Query: 66 TPNHTLRRLIQGW 78
TPN TL LI W
Sbjct: 118 TPNKTLHHLIYTW 130
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P+ CPISLQ+M DPV +G TY+R IE+W + H +CP T+Q LP LTP
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWF----SDGHNSCPKTQQQLPH-LSLTP 330
Query: 68 NHTLRRLIQGWCTLNA 83
N+ ++ LI WC N
Sbjct: 331 NYCVKGLIASWCEQNG 346
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P YFICPIS ++M++P A G TY+ +S+ +WL ++ H T P+T L + +L P
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWL----DNGHETSPMTNLKLAHN-NLVP 552
Query: 68 NHTLRRLIQGWCTLNA 83
NH LR IQ W N+
Sbjct: 553 NHALRSAIQEWLQRNS 568
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 2 DNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPR 61
D E PQYFICPISL++MKDP A G TY+ ++I WL H T P+T L
Sbjct: 320 DEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGG----HETSPMTNTKLHH 375
Query: 62 DFDLTPNHTLRRLIQGW 78
L PN LR IQ W
Sbjct: 376 T-KLVPNLALRSAIQEW 391
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
VEVP+ F C +S IM DPV +G TY++ I +WL +H TCP KQ L R
Sbjct: 72 VEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL-----NHDLTCPTAKQVLYR-VC 125
Query: 65 LTPNHTLRRLIQGWCTLNAALGIDRIPTPK 94
LTPNH + LI WC N DR P PK
Sbjct: 126 LTPNHLINELITRWCLAN---KYDR-PAPK 151
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
V P+ F CP+S ++M+DPV +G TYD+ I++WL S + TCP T+Q LP
Sbjct: 72 VSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSG----NRTCPKTQQVLPHTA- 126
Query: 65 LTPNHTLRRLIQGWCTLNA 83
LTPN +R +I WC N
Sbjct: 127 LTPNLLIREMISKWCKKNG 145
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P+ CPISLQ+M DPV +G TY+R IE+W + H TCP T Q L LTP
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWF----SDGHNTCPKTHQQLSH-LCLTP 334
Query: 68 NHTLRRLIQGWCTLNA 83
N+ ++ LI WC N
Sbjct: 335 NYCVKALISSWCEQNG 350
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
+ +P YF CP+S ++M DPV +G T+DR SI++WL ++ A CP T+Q L +
Sbjct: 200 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL----DNGLAVCPRTRQVLTHQ-E 254
Query: 65 LTPNHTLRRLIQGWCTLN 82
L PN+T++ +I W N
Sbjct: 255 LIPNYTVKAMIASWLEAN 272
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLT 66
P ++ CPI +IM+DP A G TY+R +I++W+ H PVTK L + DLT
Sbjct: 708 APTHYYCPILKEIMEDPQIAADGFTYERKAIKEWI----QKHQDVSPVTKHRL-KHSDLT 762
Query: 67 PNHTLRRLIQGW 78
PNHTLR I+ W
Sbjct: 763 PNHTLRSAIREW 774
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P +F CP+ +MK+P A G TYDR +IE+W+ +H T PVT PL ++ +L P
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWM-----ENHRTSPVTNSPL-QNVNLLP 803
Query: 68 NHTLRRLIQGWCTLN 82
NHTL I W N
Sbjct: 804 NHTLYAAIVEWRNRN 818
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
+ +P YF CP+S ++M DPV +G T+DR SI++WL ++ A CP T+Q L +
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWL----DNGLAVCPRTRQVLTHQ-E 290
Query: 65 LTPNHTLRRLIQGWCTLN 82
L PN+T++ +I W N
Sbjct: 291 LIPNYTVKAMIASWLEAN 308
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 6 EVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDL 65
++P F+CPI ++MK+P A G +Y+ ++I++WL + H T P+T L L
Sbjct: 714 DIPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWL----SMGHDTSPMTNLRLDYQM-L 768
Query: 66 TPNHTLRRLIQGWCTLNAA 84
TPNHTLR LIQ W + AA
Sbjct: 769 TPNHTLRSLIQDWHSKRAA 787
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 3 NEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRD 62
N E PQYFICPI+ IM+DP A G TY+ ++I +W H T P+ + LP
Sbjct: 349 NHREPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWF----ERGHETSPMINKRLPHT 404
Query: 63 FDLTPNHTLRRLIQGWCTLNAALG 86
L PN LR IQ W L L
Sbjct: 405 -SLVPNLALRSAIQEWLQLRELLN 427
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 13 CPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTPNHTLR 72
CPISL+IM DPV +G TYDR SI +W S + TCP T + L L N +++
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASG----NITCPKTGKTLVSTV-LVDNFSVK 338
Query: 73 RLIQGWCTLNAAL----GIDRIPTPKSPLNKTQVXXXXXXXXXEREPRDPNLQHKTLMQL 128
++IQ + N + G ++ +S + E D K L+++
Sbjct: 339 QVIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEI 398
Query: 129 ELLAAQSERNRKCLVESGVPKAVLMFIVS 157
+L S R CLVE+GV ++++ + S
Sbjct: 399 RILTKTSTFYRSCLVEAGVVESLMKILRS 427
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 9 QYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTPN 68
Q FICP++ +IM+DPVT TG+T +R ++ +W S N CPVT Q L +L+ N
Sbjct: 248 QAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTT--ELSAN 305
Query: 69 HTLRRLIQGWCTLNAALGI 87
L+ +IQ W N A I
Sbjct: 306 VVLKTIIQEWKVRNEAARI 324
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 9 QYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTPN 68
Q FICP++ +IM+DPVT TG+T +R ++ +W S N CPVT Q L +L+ N
Sbjct: 248 QAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTT--ELSAN 305
Query: 69 HTLRRLIQGWCTLNAALGI 87
L+ +IQ W N A I
Sbjct: 306 VVLKTIIQEWKVRNEAARI 324
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 9 QYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTPN 68
Q FICP++ +IM+DPVT TG+T +R ++ +W S N CPVT Q L +L+ N
Sbjct: 248 QAFICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLTT--ELSAN 305
Query: 69 HTLRRLIQGWCTLNAALGI 87
L+ +IQ W N A I
Sbjct: 306 VVLKTIIQEWKVRNEAARI 324
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
VEVP+ FIC +S IM +PV +G TY++ I +WL H TCP TKQ L
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWL-----KHERTCPKTKQVLSHRL- 123
Query: 65 LTPNHTLRRLIQGWCTLN 82
PNH + LI WC +N
Sbjct: 124 WIPNHLISDLITQWCLVN 141
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Query: 11 FICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTPNHT 70
+CPISL+IM DPV TG TYDR SI +W S + TCP+T + L +L N +
Sbjct: 292 LLCPISLEIMTDPVVIETGHTYDRSSITKWFGSG----NITCPITGKILT-STELVDNVS 346
Query: 71 LRRLIQGWCTLNAAL--GIDRIP------TPKSPLNKTQVXXXXXXXXXEREPRDPNLQH 122
+R++I+ C N + GI R P+S K E + +
Sbjct: 347 VRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIY 406
Query: 123 KTLMQLELLAAQSERNRKCLVESGVPKAVLMFIVS 157
+ + ++ + S NR CLV++G +L + S
Sbjct: 407 RAVREIRVQTKTSSFNRSCLVKAGAVTPLLKLLSS 441
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 3 NEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRD 62
+ + P ++ CPI +IM++P A G TY+R +I WL H PVT+Q L
Sbjct: 721 SNLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWL-----EKHNISPVTRQKLDH- 774
Query: 63 FDLTPNHTLRRLIQGW 78
F LTPNHTLR I+ W
Sbjct: 775 FKLTPNHTLRSAIRDW 790
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
VEVP+ FIC +S +IM +P+ +G T+++ I +WL H TCP TKQ L F
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWL-----KHERTCPRTKQVLYHRF- 116
Query: 65 LTPNHTLRRLIQGWC 79
+ PNH + +I+ WC
Sbjct: 117 MIPNHLINEVIKEWC 131
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLIS-NKNHHHATCPVTKQPLPRDFDL 65
+ + FICP++ Q+M +PVT G T++R++IE+W +N +CP+T + L DL
Sbjct: 25 IYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSIT-DL 83
Query: 66 TPNHTLRRLIQGWCTLNAALGID 88
+P+ LR I+ W N AL +D
Sbjct: 84 SPSIALRNTIEEWRARNDALKLD 106
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLIS-NKNHHHATCPVTKQPLPRDFDL 65
+ + FICP++ Q+M +PVT G T++R++IE+W +N +CP+T + L DL
Sbjct: 25 IYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSIT-DL 83
Query: 66 TPNHTLRRLIQGWCTLNAALGID 88
+P+ LR I+ W N AL +D
Sbjct: 84 SPSIALRNTIEEWRARNDALKLD 106
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 11 FICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTPNHT 70
F CPIS++IM+DP A G TY+ + +WL S T P T +PL + +L PNHT
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGR----TSPKTNKPL-ENHNLVPNHT 291
Query: 71 LRRLIQGWCTLN 82
LR +I+ W N
Sbjct: 292 LRIIIKDWLEKN 303
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 1 MDNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLP 60
+D+ P +F CPI+ +M++P A G TY++ +I++WL KNH P+T P P
Sbjct: 719 IDHHHNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWL--QKNH---KSPMTDLPFP 773
Query: 61 RDFDLTPNHTLRRLIQGW 78
D L PNH+L I+ W
Sbjct: 774 SD-SLLPNHSLLSAIKEW 790
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 1 MDNEVEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLP 60
+D+ P +F CPI+ +M++P A G TY++ +I++WL KNH P+T P P
Sbjct: 717 IDHHHNAPTHFYCPITKDVMENPCVASDGYTYEKRAIKEWL--QKNH---KSPMTDLPFP 771
Query: 61 RDFDLTPNHTLRRLIQGW 78
D L PNH+L I+ W
Sbjct: 772 SD-SLLPNHSLLSAIKEW 788
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P +++CPI ++MKDP+ A G TY+ ++I +WL + H T P+T + D +L P
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANG----HDTSPMTNLKM-EDCNLIP 790
Query: 68 NHTLRRLIQGW 78
NH L IQ W
Sbjct: 791 NHALHLAIQDW 801
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 5/71 (7%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P +++CPI ++MKDP+ A G TY+ ++I +WL + H T P+T + D +L P
Sbjct: 726 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANG----HDTSPMTNLKM-EDCNLIP 780
Query: 68 NHTLRRLIQGW 78
NH L IQ W
Sbjct: 781 NHALHLAIQDW 791
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P +FICP+ +M +P A G TYDR +IE+WL H T P+T PL +L P
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWL-----KEHNTSPMTDSPL-HSKNLLP 820
Query: 68 NHTLRRLIQGW 78
N+TL I W
Sbjct: 821 NYTLYTAIMEW 831
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P +FICP+ +M +P A G TYDR++IE+WL T PVT PLP + +L
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWL-----RQKDTSPVTNLPLP-NKNLIA 829
Query: 68 NHTLRRLIQGW 78
N+TL I W
Sbjct: 830 NYTLYSAIMEW 840
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P +FICP+ +M +P A G TYDR++IE+WL T PVT PLP +L
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWL-----RQKDTSPVTNLPLPNK-NLIA 829
Query: 68 NHTLRRLIQGW 78
N+TL I W
Sbjct: 830 NYTLYSAIMEW 840
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLT 66
P YFICPI ++M+DP A G TY+ ++I WL S H T P+T L L
Sbjct: 763 APPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSE----HDTSPMTNVKLSHT-SLI 817
Query: 67 PNHTLRRLIQGW 78
NH LR IQ W
Sbjct: 818 ANHALRSAIQEW 829
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 11 FICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTPNHT 70
F CP+SL++M DPV +G TY++ I++W+ + CP T+Q L L PN+T
Sbjct: 237 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI----DLGLKVCPKTRQTLTH-TTLIPNYT 291
Query: 71 LRRLIQGWCTLNAALGIDRIPTP 93
++ LI WC N ++P P
Sbjct: 292 VKALIANWCETNDV----KLPDP 310
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 11 FICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTPNHT 70
F CP+SL++M DPV +G TY++ I++W+ + CP T+Q L L PN+T
Sbjct: 234 FFCPLSLEVMTDPVIVSSGQTYEKAFIKRWI----DLGLKVCPKTRQTLTH-TTLIPNYT 288
Query: 71 LRRLIQGWCTLNAALGIDRIPTP 93
++ LI WC N ++P P
Sbjct: 289 VKALIANWCETNDV----KLPDP 307
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHH-ATCPVTKQPLPRDFDL 65
+ + FICP++ ++M DPVT G T++R++IE+W ++ +CP+T Q L D+
Sbjct: 23 IYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELT-STDV 81
Query: 66 TPNHTLRRLIQGWCTLNAALGID 88
+ + LR I+ W + N A +D
Sbjct: 82 SASIALRNTIEEWRSRNDAAKLD 104
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
V VP F C +SL++M DPV +G T++R I++W+ + CP T+Q L
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWI----DMGLMVCPKTRQALSHT-T 292
Query: 65 LTPNHTLRRLIQGWCTLN 82
LTPN +R + WC N
Sbjct: 293 LTPNFIVRAFLASWCETN 310
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 5 VEVPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFD 64
+E PQ FICPIS IM++P A G TY+ D +WL NH P+T L + +
Sbjct: 292 IEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWL----NHGGEKSPMTNLRL-ENRN 346
Query: 65 LTPNHTLRRLIQGW 78
L PN LR I+ W
Sbjct: 347 LIPNLVLRSAIKDW 360
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 8/82 (9%)
Query: 7 VPQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLT 66
+P+ F C +S +M DPV +G T++R I++W + + +CP++K+ L DF L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWF----DEGNDSCPISKRKLD-DFTLK 273
Query: 67 PNHTLRRLIQGWCTLNAALGID 88
PN L+ I WC N G+D
Sbjct: 274 PNVELKSQISEWCAKN---GLD 292
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 8 PQYFICPISLQIMKDPVTAITGITYDRDSIEQWLISNKNHHHATCPVTKQPLPRDFDLTP 67
P F CPI+ ++MKDP A G TY+ +SI +WL + H T P+T L L P
Sbjct: 419 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTG----HQTSPMTNLRLSH-LTLVP 473
Query: 68 NHTLRRLIQ 76
N LR I+
Sbjct: 474 NRALRSAIE 482