Miyakogusa Predicted Gene
- Lj0g3v0014299.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0014299.1 Non Chatacterized Hit- tr|I1LYM1|I1LYM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7632
PE=,78.7,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; HELICASE_CTER,Helicase,
C-termina,NODE_1768_length_4244_cov_23.186146.path1.1
(1237 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 1389 0.0
AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 | chr5:25... 332 1e-90
AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 267 4e-71
AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin re... 267 4e-71
AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 267 4e-71
AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside ... 267 5e-71
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 261 3e-69
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 261 3e-69
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498906... 261 3e-69
AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 257 3e-68
AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 257 4e-68
AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |... 257 4e-68
AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 | chr2:5544... 255 2e-67
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:... 251 2e-66
AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 | c... 250 4e-66
AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 | c... 250 5e-66
AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 ... 249 8e-66
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 246 7e-65
AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 | chr3:6652799-6... 243 9e-64
AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putat... 241 3e-63
AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putat... 240 6e-63
AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDD... 233 6e-61
AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helic... 223 5e-58
AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containi... 222 1e-57
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 222 2e-57
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 222 2e-57
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 222 2e-57
AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helic... 219 7e-57
AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 219 9e-57
AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription re... 216 1e-55
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 190 6e-48
AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORW... 180 6e-45
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 177 3e-44
AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog | chr3:21... 152 2e-36
AT3G57300.2 | Symbols: INO80 | INO80 ortholog | chr3:21199612-21... 149 1e-35
AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling facto... 126 1e-28
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 119 1e-26
AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helic... 105 2e-22
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 103 6e-22
AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helic... 102 2e-21
AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helic... 102 2e-21
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 101 3e-21
AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein / ... 100 8e-21
AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein / ... 100 8e-21
AT5G05130.1 | Symbols: | DNA/RNA helicase protein | chr5:151217... 100 8e-21
AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein | chr5:75... 100 1e-20
AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domai... 97 5e-20
AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helic... 92 2e-18
AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helic... 89 2e-17
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 89 3e-17
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 81 5e-15
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 80 1e-14
AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domai... 79 2e-14
AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosph... 77 7e-14
AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helic... 67 8e-11
AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases... 65 2e-10
AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helic... 61 6e-09
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 1389 bits (3596), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 752/1249 (60%), Positives = 870/1249 (69%), Gaps = 75/1249 (6%)
Query: 1 MEEEQDRILLSSLGVKSANPEDIERHVLEKARNDAAVTVTTEGEGSNTKEEESSHSREPL 60
MEE++D+ LLSSLGV SANPED+E+ +L D A EG + EE S E
Sbjct: 1 MEEDEDQFLLSSLGVTSANPEDLEQKIL-----DEATKKPDNDEGGSV--EEKSTQLEGT 53
Query: 61 DPSSTAKAELHQKLRAVEFEIGAVSSTIRKPKKDGGGEGSSERXXXXXXXXXXXXXXXSS 120
+ S+++ EL KLRAV+FEI AV+ST+ + +G S+
Sbjct: 54 NLLSSSQNELLNKLRAVKFEIDAVASTVENVDEIAAEKG----LKKDDESDLQGLHSGSA 109
Query: 121 LQRALAADRLRSLKNTRAKLTNELSSLCEKNTKAQLEEELANLRKTLLRSLVKEDTRPXX 180
LQ ALA DRLRSLK + +L EL+ L ++ + + LLR LVKE
Sbjct: 110 LQHALATDRLRSLKKRKIQLEKELTGLHGQSASSSADH------GNLLRDLVKEKPSLKR 163
Query: 181 XXXXXXXXXXXXXXRVKTVSFNXXXXXXXXXXXXXXGFVETERDEMVRKGILTPFHKLKG 240
+VK VSF GFVETERDE+VRKGILTPFHKL G
Sbjct: 164 KLKEIRKPSRRDGKKVKVVSFREDTDFDAVFDGASAGFVETERDELVRKGILTPFHKLDG 223
Query: 241 FERRFSQPEASASHNAETSASHAAAQQENNGDLVSSSVERAARSFSEAAKARPTTKLLES 300
FERR QP S S N + N D SS ++RA +S S AAKARPTTKLL++
Sbjct: 224 FERRLQQPGPSNSRNLPEG-------DDENED--SSIIDRAVQSMSLAAKARPTTKLLDA 274
Query: 301 RDLPKLDAPTIPFRRLTKPLKYSKPIDREAEPNKDSKRKRK-RPLPGRQWTNRVSREDMQ 359
DLPKL+ PT PFRRL K K D EA+ K K+ +K RPLP ++W R+SRED
Sbjct: 275 EDLPKLEPPTAPFRRLRKLYKTPNSPDNEAKKRKAGKKSKKTRPLPEKKWRKRISREDSS 334
Query: 360 LEDSENANGCLDTSD--QENLGAQDDLADHESSYVTLEGGLKIPDNIFEALFDYQKVGVQ 417
L+ S + L TS +E L DD D+E S V LEGGL IP+ IF LFDYQ+VGVQ
Sbjct: 335 LQGSGDGRRILTTSSCEEEELDDFDDADDNERSSVQLEGGLNIPECIFRKLFDYQRVGVQ 394
Query: 418 WLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFKPSIIVCPVTLLRQWKREANK 477
WLWELHCQ+AGGIIGDEMGLGKT+QVLSFLG+LHFS M+KPSII+CPVTLLRQW+REA K
Sbjct: 395 WLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSKMYKPSIIICPVTLLRQWRREAQK 454
Query: 478 WYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRV 537
WYP FHVE+LHDSAQDS K Q N++KW+SL+NRV
Sbjct: 455 WYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSK--NTKKWDSLLNRV 512
Query: 538 TRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIM 597
SESGLLITTYEQLR+ G++LL+IEWGYAVLDEGH+IRNPN+++TLVCKQLQTVHRIIM
Sbjct: 513 LNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIM 572
Query: 598 TGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRCAVV 657
TGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEF+VPI VGGYANA+PLQVSTAYRCAVV
Sbjct: 573 TGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRCAVV 632
Query: 658 LRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNS 717
LRDLIMPYLLRRMKADVNA L KTEHVLFCSLT EQ S+YRAFLAS+EVE+I DGNRNS
Sbjct: 633 LRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLASSEVEQIFDGNRNS 692
Query: 718 LSGIDVMRKICNHPDLLERDHALSNPDYGNPERSGKMKVVAQVLNVWKEQGHRVLLFCQT 777
L GIDVMRKICNHPDLLER+H+ NPDYGNPERSGKMKVVA+VL VWK+QGHRVLLF QT
Sbjct: 693 LYGIDVMRKICNHPDLLEREHSHQNPDYGNPERSGKMKVVAEVLKVWKQQGHRVLLFSQT 752
Query: 778 QQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLT 837
QQMLDI E+FL + + YRRMDG TPVK RMALIDEFN S ++FVF+LTTKVGGLGTNLT
Sbjct: 753 QQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTTKVGGLGTNLT 812
Query: 838 GANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTN 897
GANRVIIFDPDWNPS DMQARERAWRIGQK+DVTVYRLITRGTIEEKVYHRQIYKHFLTN
Sbjct: 813 GANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTN 872
Query: 898 KILKNPQQKRFFKARDMKDLFILNVDGDT-GSTETSNIFSQISEEVNVIGSHIDNQDKHQ 956
KILKNPQQ+RFFKARDMKDLFIL DGD+ STETSNIFSQ++EE+N++G D + +
Sbjct: 873 KILKNPQQRRFFKARDMKDLFILKDDGDSNASTETSNIFSQLAEEINIVGVQSDKKPESD 932
Query: 957 ----YNQTAEAGSGDDDV---DNDGESPRGSLRXXXXXXXXXXXXIDEETNILKSLFDAN 1009
++TAE S DV D GE+ +DEETNILKSLFDA+
Sbjct: 933 TQLALHKTAEGSSEQTDVEMTDKTGEA------------------MDEETNILKSLFDAH 974
Query: 1010 GIHSAMNHDVIMNAHD-GEKMRLDEQASQVAQRAAEALRQSRILRSNDSVSVPTWTGRSG 1068
GIHSA+NHD IMNA+D EKMRL+ QASQVAQRAAEALRQSR+LRS +S+SVPTWTGRSG
Sbjct: 975 GIHSAVNHDAIMNANDEEEKMRLEHQASQVAQRAAEALRQSRMLRSRESISVPTWTGRSG 1034
Query: 1069 AAGAPSSVRRKFGSTVNPQLVNNSKAPDALPSNGTNKFNGFXXXXXXXXXXXXXXXXXXI 1128
AGAPSSVRR+FGSTVN +L P A+ NG I
Sbjct: 1035 CAGAPSSVRRRFGSTVNSRLTQTGDKPSAIK-------NGISAGLSSGKAPSSAELLNRI 1087
Query: 1129 RGNQEKAIGAGLEHQLGTSSTTNQARSTDVRSSRAAENSSGSQPEVLIRQICTFLXXXXX 1188
RG++E+AIG GLE Q +S+ SS ++ QPEVLIR+IC+F+
Sbjct: 1088 RGSREQAIGVGLE----------QPQSSFPSSSGSSSRVGSLQPEVLIRKICSFVQQKGG 1137
Query: 1189 XXXXXXIVQHFKDRVSSRELALFKNMLKEIAILQKGSNGSHWVLKPEYQ 1237
IV HF+D VS + LFKN+LKEIA L+K N S WVLK EY+
Sbjct: 1138 SADTTSIVNHFRDIVSFNDKQLFKNLLKEIATLEKDQNRSFWVLKSEYK 1186
>AT5G63950.1 | Symbols: CHR24 | chromatin remodeling 24 |
chr5:25592160-25598405 REVERSE LENGTH=1090
Length = 1090
Score = 332 bits (850), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 202/581 (34%), Positives = 297/581 (51%), Gaps = 90/581 (15%)
Query: 392 VTLEG---GLKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLG 448
+TL G +P I L+ +Q+ G+ WLW LH Q GGI+GD+MGLGKT+Q+ SFL
Sbjct: 358 ITLTGLNLSYTLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFLA 417
Query: 449 ALHFSGMFKPSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXX 508
L S + K +++V P TLL P + EL
Sbjct: 418 GLFHSKLIKRALVVAPKTLL-----------PHWMKEL---------------------- 444
Query: 509 XXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLR-----ILGDQLLDIE 563
G S K G+L+TTY+ +R + GD E
Sbjct: 445 ---ATVGLSQMTREYYGTSTKAREYDLHHILQGKGILLTTYDIVRNNTKALQGDDHYTDE 501
Query: 564 -------WGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFV 616
W Y +LDEGH I+NPN + ++ + HRII++G PIQN L ELW+LF+F
Sbjct: 502 DDEDGNKWDYMILDEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKELWALFNFS 561
Query: 617 FPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADV-- 674
PG LG F+ + I G NAT + A LR+ I P+ LRR+K++V
Sbjct: 562 CPGLLGDKNWFKQNYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKSEVFG 621
Query: 675 ----NAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDVMRKICNH 730
++L K E V++ LT Q Y AFL S V DG+ L+ + +++KIC+H
Sbjct: 622 DDGATSKLSKKDEIVVWLRLTACQRQLYEAFLNSEIVLSAFDGS--PLAALTILKKICDH 679
Query: 731 PDLLER----------DHALSNPDYGNPER---------------------SGKMKVVAQ 759
P LL + D L+ + G ER S K+ +
Sbjct: 680 PLLLTKRAAEDVLEGMDSTLTQEEAGVAERLAMHIADNVDTDDFQTKNDSISCKLSFIMS 739
Query: 760 VLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNE 819
+L +GHRVL+F QT++ML++ ++ LT++G+ + R+DG T R+ ++EF +
Sbjct: 740 LLENLIPEGHRVLIFSQTRKMLNLIQDSLTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHV 799
Query: 820 IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRG 879
+F+LT++VGGLG LT A+RVI+ DP WNPSTD Q+ +RA+RIGQ +DV VYRL+T
Sbjct: 800 APIFLLTSQVGGLGLTLTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSA 859
Query: 880 TIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFIL 920
T+EEK+Y +Q+YK L ++ +Q R+F +D+++LF L
Sbjct: 860 TVEEKIYRKQVYKGGLFKTATEHKEQIRYFSQQDLRELFSL 900
>AT2G28290.2 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3529
Length = 3529
Score = 267 bits (682), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/508 (33%), Positives = 259/508 (50%), Gaps = 58/508 (11%)
Query: 408 LFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFK-PSIIVCPVT 466
L +YQ G++WL L+ GI+ DEMGLGKTVQV+S + L + + P ++V P +
Sbjct: 754 LREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSS 813
Query: 467 LLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGN 526
+L W+ E N W P H ++++ D
Sbjct: 814 VLPGWQSEINFWAPSIH-KIVYCGTPD--------------------------------E 840
Query: 527 SRKWESLINRVTRSESGLLITTYEQLRILGD--QLLDIEWGYAVLDEGHKIRNPNAEVTL 584
RK ++ + +L+TTYE L D +L I W Y ++DEGH+I+N + ++
Sbjct: 841 RRKL--FKEQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNA 898
Query: 585 VCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANAT 644
K + HR+++TG P+QN L ELW+L +F+ P F F P G ++A
Sbjct: 899 DLKHYVSSHRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAE 958
Query: 645 PLQVSTAYRCAVV--LRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFL 702
+S ++ L ++ P++LRR+K V +LP K E ++ C + S+Y+ L
Sbjct: 959 EALLSEEENLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRC-----EASAYQKLL 1013
Query: 703 ASTEVEEILDGNRNSLS-----GIDVMRKICNHPDLLERDHALSN---PDYGNP---ERS 751
VE+ L N+ S + +R ICNHP L + N P + P
Sbjct: 1014 MK-RVEDNLGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLC 1072
Query: 752 GKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALI 811
GK++++ ++L K HRVL F ++LD+ E++LT G+ Y R+DG T R ALI
Sbjct: 1073 GKLEMLDRMLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALI 1132
Query: 812 DEFNAS-NEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 870
D FN S + F+F+L+ + GG+G NL A+ VI+FD DWNP D+QA+ RA RIGQK+DV
Sbjct: 1133 DGFNKSGSPFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDV 1192
Query: 871 TVYRLITRGTIEEKVYHRQIYKHFLTNK 898
V R T ++EE+V +K + N+
Sbjct: 1193 LVLRFETVNSVEEQVRASAEHKLGVANQ 1220
>AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | chromatin
remodeling factor CHD3 (PICKLE) | chr2:10714411-10723763
FORWARD LENGTH=1384
Length = 1384
Score = 267 bits (682), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 264/510 (51%), Gaps = 39/510 (7%)
Query: 401 PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFKPSI 460
P+ + L YQ G+ +L ++ I+ DEMGLGKT+Q ++ L +L F P +
Sbjct: 266 PEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASL-FEENLIPHL 324
Query: 461 IVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 520
++ P++ LR W+RE W P+ +V + +AQ A ++
Sbjct: 325 VIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQIS 384
Query: 521 XXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNA 580
++ R + +L+T+YE + + L I+W ++DEGH+++N ++
Sbjct: 385 SE------------SKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDS 432
Query: 581 EVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGY 640
++ Q + HRI++TG P+QN L EL+ L F+ GK G L F+ EF
Sbjct: 433 KLFSSLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFK-------- 484
Query: 641 ANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRA 700
Q+S L ++ P+LLRR+K DV +P K E +L L+ Q Y+A
Sbjct: 485 DINQEEQISR-------LHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKA 537
Query: 701 -FLASTEVEEILDGNRNSLSGIDV-MRKICNHPDLLERDHAL---SNPDYGN-PERSGKM 754
F + +V G + SL+ I + +RK+C HP +LE + +N + E GK+
Sbjct: 538 IFTRNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGKL 597
Query: 755 KVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEF 814
+++ +++ KEQGHRVL++ Q Q MLD+ E++ T Y R+DG R ID F
Sbjct: 598 QLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRF 657
Query: 815 NASNE-IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVY 873
NA N F F+L+T+ GGLG NL A+ VII+D DWNP D+QA RA R+GQ V +Y
Sbjct: 658 NAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIY 717
Query: 874 RLITRGTIEEKVYH----RQIYKHFLTNKI 899
RLI RGTIEE++ + + +H + K+
Sbjct: 718 RLINRGTIEERMMQLTKKKMVLEHLVVGKL 747
>AT2G28290.3 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3543
Length = 3543
Score = 267 bits (682), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 277/560 (49%), Gaps = 75/560 (13%)
Query: 371 DTSDQENLGAQDDLADHESSYVTLEGGLK-------IPDNIFE--------ALFDYQKVG 415
+ +D E L +D +D Y LE K I +NI E L +YQ G
Sbjct: 704 NATDDETLIENEDESDQAKHY--LESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNG 761
Query: 416 VQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFK-PSIIVCPVTLLRQWKRE 474
++WL L+ GI+ DEMGLGKTVQV+S + L + + P ++V P ++L W+ E
Sbjct: 762 LRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSE 821
Query: 475 ANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLI 534
N W P H ++++ D RK
Sbjct: 822 INFWAPSIH-KIVYCGTPD--------------------------------ERRKL--FK 846
Query: 535 NRVTRSESGLLITTYEQLRILGD--QLLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTV 592
++ + +L+TTYE L D +L I W Y ++DEGH+I+N + ++ K +
Sbjct: 847 EQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSS 906
Query: 593 HRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAY 652
HR+++TG P+QN L ELW+L +F+ P F F P G ++A +S
Sbjct: 907 HRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEE 966
Query: 653 RCAVV--LRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEI 710
++ L ++ P++LRR+K V +LP K E ++ C + S+Y+ L VE+
Sbjct: 967 NLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRC-----EASAYQKLLMK-RVEDN 1020
Query: 711 LDGNRNSLS-----GIDVMRKICNHPDLLERDHALSN---PDYGNP---ERSGKMKVVAQ 759
L N+ S + +R ICNHP L + N P + P GK++++ +
Sbjct: 1021 LGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDR 1080
Query: 760 VLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNAS-N 818
+L K HRVL F ++LD+ E++LT G+ Y R+DG T R ALID FN S +
Sbjct: 1081 MLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGS 1140
Query: 819 EIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITR 878
F+F+L+ + GG+G NL A+ VI+FD DWNP D+QA+ RA RIGQK+DV V R T
Sbjct: 1141 PFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETV 1200
Query: 879 GTIEEKVYHRQIYKHFLTNK 898
++EE+V +K + N+
Sbjct: 1201 NSVEEQVRASAEHKLGVANQ 1220
>AT2G28290.1 | Symbols: SYD, CHR3 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr2:12056771-12072950 FORWARD LENGTH=3574
Length = 3574
Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 277/560 (49%), Gaps = 75/560 (13%)
Query: 371 DTSDQENLGAQDDLADHESSYVTLEGGLK-------IPDNIFE--------ALFDYQKVG 415
+ +D E L +D +D Y LE K I +NI E L +YQ G
Sbjct: 704 NATDDETLIENEDESDQAKHY--LESNEKYYLMAHSIKENINEQPSSLVGGKLREYQMNG 761
Query: 416 VQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFK-PSIIVCPVTLLRQWKRE 474
++WL L+ GI+ DEMGLGKTVQV+S + L + + P ++V P ++L W+ E
Sbjct: 762 LRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSE 821
Query: 475 ANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLI 534
N W P H ++++ D RK
Sbjct: 822 INFWAPSIH-KIVYCGTPD--------------------------------ERRKL--FK 846
Query: 535 NRVTRSESGLLITTYEQLRILGD--QLLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTV 592
++ + +L+TTYE L D +L I W Y ++DEGH+I+N + ++ K +
Sbjct: 847 EQIVHQKFNVLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSS 906
Query: 593 HRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAY 652
HR+++TG P+QN L ELW+L +F+ P F F P G ++A +S
Sbjct: 907 HRLLLTGTPLQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEE 966
Query: 653 RCAVV--LRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEI 710
++ L ++ P++LRR+K V +LP K E ++ C + S+Y+ L VE+
Sbjct: 967 NLLIINRLHQVLRPFVLRRLKHKVENELPEKIERLIRC-----EASAYQKLLMK-RVEDN 1020
Query: 711 LDGNRNSLS-----GIDVMRKICNHPDLLERDHALSN---PDYGNP---ERSGKMKVVAQ 759
L N+ S + +R ICNHP L + N P + P GK++++ +
Sbjct: 1021 LGSIGNAKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPPIVRLCGKLEMLDR 1080
Query: 760 VLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNAS-N 818
+L K HRVL F ++LD+ E++LT G+ Y R+DG T R ALID FN S +
Sbjct: 1081 MLPKLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGS 1140
Query: 819 EIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITR 878
F+F+L+ + GG+G NL A+ VI+FD DWNP D+QA+ RA RIGQK+DV V R T
Sbjct: 1141 PFFIFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETV 1200
Query: 879 GTIEEKVYHRQIYKHFLTNK 898
++EE+V +K + N+
Sbjct: 1201 NSVEEQVRASAEHKLGVANQ 1220
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 260/554 (46%), Gaps = 106/554 (19%)
Query: 411 YQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFL--------GALHFSGMFKPSIIV 462
YQ+ G+ WL L K GI+ D+MGLGKT+Q + + G+ +F PSIIV
Sbjct: 1454 YQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVF-PSIIV 1512
Query: 463 CPVTLLRQWKREANKWYPKFHVELLH--DSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 520
CP TL+ W E K+ + +L SAQD ++Q
Sbjct: 1513 CPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF------------------- 1553
Query: 521 XXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNA 580
+ ++IT+Y+ +R D L W Y +LDEGH I+N +
Sbjct: 1554 -------------------NNHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKS 1594
Query: 581 EVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGY 640
++T KQL+ HR+I++G PIQN + ELWSLFDF+ PG LG F+A + P+
Sbjct: 1595 KITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARD 1654
Query: 641 ANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRA 700
+ L +MP+LLRR K +V + LP K +C L+P Q+ Y
Sbjct: 1655 PKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQ 1714
Query: 701 FLASTEVEEI-----LDGNRNS--------------LSGIDVMRKICNHPDLLERDH--- 738
F S+ +EI +DG+ +S + + K+C+HP L+ D
Sbjct: 1715 FSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTE 1774
Query: 739 -------ALSN------PDYGNPERSGKMKVVAQVLNVWKEQG----------------H 769
A+ N + + S K+ + ++L +E G H
Sbjct: 1775 PVASDLAAMINGCSDIITELHKVQHSPKLVALQEIL---EECGIGSDASSSDGTLSVGQH 1831
Query: 770 RVLLFCQTQQMLDIFENFLTTS---GHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILT 826
RVL+F Q + +LDI E L + Y R+DG + R ++ FN+ I V +LT
Sbjct: 1832 RVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLT 1891
Query: 827 TKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVY 886
T VGGLG NLT A+ ++ + DWNP D QA +RA R+GQKR V V+RLI RGT+EEKV
Sbjct: 1892 THVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVM 1951
Query: 887 HRQIYKHFLTNKIL 900
Q +K + N ++
Sbjct: 1952 SLQKFKVSVANTVI 1965
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 177/554 (31%), Positives = 260/554 (46%), Gaps = 106/554 (19%)
Query: 411 YQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFL--------GALHFSGMFKPSIIV 462
YQ+ G+ WL L K GI+ D+MGLGKT+Q + + G+ +F PSIIV
Sbjct: 1485 YQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDVF-PSIIV 1543
Query: 463 CPVTLLRQWKREANKWYPKFHVELLH--DSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 520
CP TL+ W E K+ + +L SAQD ++Q
Sbjct: 1544 CPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQF------------------- 1584
Query: 521 XXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNA 580
+ ++IT+Y+ +R D L W Y +LDEGH I+N +
Sbjct: 1585 -------------------NNHNVIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKS 1625
Query: 581 EVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGY 640
++T KQL+ HR+I++G PIQN + ELWSLFDF+ PG LG F+A + P+
Sbjct: 1626 KITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARD 1685
Query: 641 ANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRA 700
+ L +MP+LLRR K +V + LP K +C L+P Q+ Y
Sbjct: 1686 PKCSAKDAEAGVLAMEALHKQVMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQ 1745
Query: 701 FLASTEVEEI-----LDGNRNS--------------LSGIDVMRKICNHPDLLERDH--- 738
F S+ +EI +DG+ +S + + K+C+HP L+ D
Sbjct: 1746 FSGSSAKQEISSIIKVDGSADSGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTE 1805
Query: 739 -------ALSN------PDYGNPERSGKMKVVAQVLNVWKEQG----------------H 769
A+ N + + S K+ + ++L +E G H
Sbjct: 1806 PVASDLAAMINGCSDIITELHKVQHSPKLVALQEIL---EECGIGSDASSSDGTLSVGQH 1862
Query: 770 RVLLFCQTQQMLDIFENFLTTS---GHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILT 826
RVL+F Q + +LDI E L + Y R+DG + R ++ FN+ I V +LT
Sbjct: 1863 RVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLLT 1922
Query: 827 TKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVY 886
T VGGLG NLT A+ ++ + DWNP D QA +RA R+GQKR V V+RLI RGT+EEKV
Sbjct: 1923 THVGGLGLNLTSADTLVFMEHDWNPMRDHQAMDRAHRLGQKRVVNVHRLIMRGTLEEKVM 1982
Query: 887 HRQIYKHFLTNKIL 900
Q +K + N ++
Sbjct: 1983 SLQKFKVSVANTVI 1996
>AT5G19310.1 | Symbols: | Homeotic gene regulator |
chr5:6498906-6503432 FORWARD LENGTH=1064
Length = 1064
Score = 261 bits (666), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 259/513 (50%), Gaps = 72/513 (14%)
Query: 408 LFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFS-GMFKPSIIVCPVT 466
L YQ G+QW+ L+ GI+ DEMGLGKT+Q ++ + L S + P +I+ P
Sbjct: 386 LRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAPKA 445
Query: 467 LLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGN 526
+L W+ E W P L+D G+
Sbjct: 446 VLPNWENEFALWAPSISA-FLYD-----------------------------------GS 469
Query: 527 SRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLVC 586
K + R+ + +LIT Y+ + L I+W Y ++DEGH+++N +
Sbjct: 470 KEKRTEIRARIAGGKFNVLITHYDLIMRDKAFLKKIDWNYMIVDEGHRLKNHECAL---A 526
Query: 587 KQLQTVHRI----IMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYAN 642
K L T +RI ++TG PIQN L ELWSL +F+ P + FE F P G A+
Sbjct: 527 KTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEWFNTPFAECGSAS 586
Query: 643 ATPLQVSTAYRCAVV--LRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRA 700
T + ++ L +I P+LLRR K++V LP KT+ +L C ++ Q Y+
Sbjct: 587 LTDEE-----ELLIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYKQ 641
Query: 701 FLASTEVEEIL----DGNRNSLSGIDV-MRKICNHPDLLERDHALSNPDYG---NPE--- 749
T+V + +G SL + + +RK CNHP + DY PE
Sbjct: 642 V---TDVGRVGLHSGNGKSKSLQNLTMQLRKCCNHP------YLFVGADYNMCKKPEIVR 692
Query: 750 RSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMA 809
SGK +++ ++L K+ GHR+LLF Q +++D+ E +L+ + ++Y R+DG T R
Sbjct: 693 ASGKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGI 752
Query: 810 LIDEFNASNE-IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKR 868
L+ +FN + F+F+L+T+ GGLG NL A+ +IIFD DWNP D QA +RA RIGQK+
Sbjct: 753 LLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKK 812
Query: 869 DVTVYRLITRGTIEEKVYHRQIYKHFLTNKILK 901
+V V+ L++ G+IEE + R K + K+++
Sbjct: 813 EVRVFVLVSIGSIEEVILERAKQKMGIDAKVIQ 845
>AT3G06400.3 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1057
Length = 1057
Score = 257 bits (657), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 257/504 (50%), Gaps = 60/504 (11%)
Query: 398 LKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH-FSGMF 456
L P I + DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH + G+
Sbjct: 179 LTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGIN 238
Query: 457 KPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXXXXXXX 515
P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 GPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------------ 280
Query: 516 XXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKI 575
E L+ + + +T++E L W Y ++DE H+I
Sbjct: 281 ---------------EDLL---VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRI 322
Query: 576 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 635
+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+ F +
Sbjct: 323 KNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQI-- 380
Query: 636 GVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQV 695
+ Q + VLR P+LLRR+K+DV LP K E +L ++ Q
Sbjct: 381 ------SGENDQQEVVQQLHKVLR----PFLLRRLKSDVEKGLPPKKETILKVGMSQMQK 430
Query: 696 SSYRAFLASTEVEEI-LDGNRNSLSGIDV-MRKICNHPDLLERDHALSNPDYGNPER--- 750
Y+A L ++E + G R L I + +RK CNHP L + A P Y +
Sbjct: 431 QYYKALL-QKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQ--GAEPGPPYTTGDHLIT 487
Query: 751 -SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMA 809
+GKM ++ ++L KE+ RVL+F Q ++LDI E++L G++Y R+DG+T R A
Sbjct: 488 NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDA 547
Query: 810 LIDEFNA-SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKR 868
I+ +N +E FVF+L+T+ GGLG NL A+ VI++D DWNP D+QA++RA RIGQK+
Sbjct: 548 SIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 607
Query: 869 DVTVYRLITRGTIEEKVYHRQIYK 892
+V V+R T IEEKV R K
Sbjct: 608 EVQVFRFCTESAIEEKVIERAYKK 631
>AT3G06400.2 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1056
Length = 1056
Score = 257 bits (656), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 257/504 (50%), Gaps = 60/504 (11%)
Query: 398 LKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH-FSGMF 456
L P I + DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH + G+
Sbjct: 179 LTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGIN 238
Query: 457 KPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXXXXXXX 515
P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 GPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------------ 280
Query: 516 XXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKI 575
E L+ + + +T++E L W Y ++DE H+I
Sbjct: 281 ---------------EDLL---VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRI 322
Query: 576 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 635
+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+ F +
Sbjct: 323 KNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQI-- 380
Query: 636 GVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQV 695
+ Q + VLR P+LLRR+K+DV LP K E +L ++ Q
Sbjct: 381 ------SGENDQQEVVQQLHKVLR----PFLLRRLKSDVEKGLPPKKETILKVGMSQMQK 430
Query: 696 SSYRAFLASTEVEEI-LDGNRNSLSGIDV-MRKICNHPDLLERDHALSNPDYGNPER--- 750
Y+A L ++E + G R L I + +RK CNHP L + A P Y +
Sbjct: 431 QYYKALL-QKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQ--GAEPGPPYTTGDHLIT 487
Query: 751 -SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMA 809
+GKM ++ ++L KE+ RVL+F Q ++LDI E++L G++Y R+DG+T R A
Sbjct: 488 NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDA 547
Query: 810 LIDEFNA-SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKR 868
I+ +N +E FVF+L+T+ GGLG NL A+ VI++D DWNP D+QA++RA RIGQK+
Sbjct: 548 SIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 607
Query: 869 DVTVYRLITRGTIEEKVYHRQIYK 892
+V V+R T IEEKV R K
Sbjct: 608 EVQVFRFCTESAIEEKVIERAYKK 631
>AT3G06400.1 | Symbols: CHR11 | chromatin-remodeling protein 11 |
chr3:1941066-1946700 FORWARD LENGTH=1055
Length = 1055
Score = 257 bits (656), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 168/504 (33%), Positives = 257/504 (50%), Gaps = 60/504 (11%)
Query: 398 LKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH-FSGMF 456
L P I + DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH + G+
Sbjct: 179 LTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGIN 238
Query: 457 KPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXXXXXXX 515
P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 GPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------------ 280
Query: 516 XXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKI 575
E L+ + + +T++E L W Y ++DE H+I
Sbjct: 281 ---------------EDLL---VAGKFDICVTSFEMAIKEKTALRRFSWRYIIIDEAHRI 322
Query: 576 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 635
+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+ F +
Sbjct: 323 KNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQI-- 380
Query: 636 GVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQV 695
+ Q + VLR P+LLRR+K+DV LP K E +L ++ Q
Sbjct: 381 ------SGENDQQEVVQQLHKVLR----PFLLRRLKSDVEKGLPPKKETILKVGMSQMQK 430
Query: 696 SSYRAFLASTEVEEI-LDGNRNSLSGIDV-MRKICNHPDLLERDHALSNPDYGNPER--- 750
Y+A L ++E + G R L I + +RK CNHP L + A P Y +
Sbjct: 431 QYYKALL-QKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQ--GAEPGPPYTTGDHLIT 487
Query: 751 -SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMA 809
+GKM ++ ++L KE+ RVL+F Q ++LDI E++L G++Y R+DG+T R A
Sbjct: 488 NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDA 547
Query: 810 LIDEFNA-SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKR 868
I+ +N +E FVF+L+T+ GGLG NL A+ VI++D DWNP D+QA++RA RIGQK+
Sbjct: 548 SIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 607
Query: 869 DVTVYRLITRGTIEEKVYHRQIYK 892
+V V+R T IEEKV R K
Sbjct: 608 EVQVFRFCTESAIEEKVIERAYKK 631
>AT2G13370.1 | Symbols: CHR5 | chromatin remodeling 5 |
chr2:5544601-5555543 REVERSE LENGTH=1724
Length = 1724
Score = 255 bits (651), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/509 (32%), Positives = 258/509 (50%), Gaps = 57/509 (11%)
Query: 407 ALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFK-PSIIVCPV 465
L DYQ G+ +L I+ DEMGLGKTVQ +S LG L + P ++V P+
Sbjct: 624 TLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLVVVPL 683
Query: 466 TLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXG 525
+ L W +E KW P ++ +++ + S +Q
Sbjct: 684 STLANWAKEFRKWLPGMNI-IVYVGTRASREVCQQYEFYN-------------------- 722
Query: 526 NSRKWESLINRVTRSESGLLITTYEQLRILGDQ--LLDIEWGYAVLDEGHKIRNPNAEVT 583
E + R + + L+TTYE +L D+ L I+W Y ++DE H+++N A++
Sbjct: 723 -----EKKVGRPIKFNA--LLTTYEV--VLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLY 773
Query: 584 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 643
+ T +++++TG P+QN + ELW+L F+ PGK F V Y N
Sbjct: 774 TALLEFSTKNKLLITGTPLQNSVEELWALLHFLDPGKFKNKDEF---------VENYKNL 824
Query: 644 TPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLA 703
+ S + LR P++LRR+ DV LP K E +L ++P Q Y+ L
Sbjct: 825 SSFNESELANLHLELR----PHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILE 880
Query: 704 ST--EVEEILDGNRNSLSGIDV-MRKICNHPDLLER-DHALSNPDYGNPE------RSGK 753
++ + + GN+ SL I V ++K CNHP L E DH N + SGK
Sbjct: 881 RNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGK 940
Query: 754 MKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDE 813
+ ++ ++L +E HRVL+F Q +MLDI +L+ G ++R+DG T + R +D
Sbjct: 941 LVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDH 1000
Query: 814 FNA-SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTV 872
FNA +++ F F+L+T+ GGLG NL A+ V+IFD DWNP D+QA RA RIGQ+ V +
Sbjct: 1001 FNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNI 1060
Query: 873 YRLITRGTIEEKVYHRQIYKHFLTNKILK 901
YR +T ++EE++ R K L + +++
Sbjct: 1061 YRFVTSKSVEEEILERAKRKMVLDHLVIQ 1089
>AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator |
chr3:1802435-1807284 REVERSE LENGTH=1102
Length = 1102
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 277/568 (48%), Gaps = 83/568 (14%)
Query: 356 EDMQLEDSEN---ANGCLDTSDQENLGA---QDDLADHESSYVTLEGGLKIPDNIFEALF 409
+D+ + +S+N +N L+ Q N Q+ + + S LEGG L
Sbjct: 357 QDIDITESDNNDDSNDLLEGQRQYNSAIHSIQEKVTEQPS---LLEGG---------ELR 404
Query: 410 DYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGAL-HFSGMFKPSIIVCPVTLL 468
YQ G+QW+ L GI+ DEMGLGKT+Q +S + L G+ P +IV P +L
Sbjct: 405 SYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVL 464
Query: 469 RQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSR 528
W E W P L+D G
Sbjct: 465 PNWVNEFATWVPSI-AAFLYD-----------------------------------GRLE 488
Query: 529 KWESLINRVT-RSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLVCK 587
+ +++ ++ + +LIT Y+ + L IEW Y ++DEGH+++N + + K
Sbjct: 489 ERKAIREKIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYMIVDEGHRLKNHESAL---AK 545
Query: 588 QLQTVHRI----IMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 643
L T +RI ++TG PIQN L ELWSL +F+ P + FE F P G +
Sbjct: 546 TLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQNFEEWFNAPFADRGNVSL 605
Query: 644 T-PLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFL 702
T ++ +R V+R P++LRR K +V LP KT+ +L C ++ Q Y+
Sbjct: 606 TDEEELLIIHRLHHVIR----PFILRRKKDEVEKFLPGKTQVILKCDMSAWQKVYYKQVT 661
Query: 703 ASTEVE-EILDGNRNSLSGIDV-MRKICNHPDLLERDHALSNPDYG---NPE---RSGKM 754
V + G SL + + +RK CNHP + DY PE SGK
Sbjct: 662 DMGRVGLQTGSGKSKSLQNLTMQLRKCCNHP------YLFVGGDYNMWKKPEIVRASGKF 715
Query: 755 KVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEF 814
+++ ++L ++ GHR+LLF Q +++D+ E +LT + + Y R+DG T R L+ +F
Sbjct: 716 ELLDRLLPKLRKAGHRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQF 775
Query: 815 NASNE-IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVY 873
N + F+F+L+T+ GGLG NL A+ VIIFD DWNP D QA +RA RIGQK++V V+
Sbjct: 776 NEPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVF 835
Query: 874 RLITRGTIEEKVYHRQIYKHFLTNKILK 901
L++ G++EE + R K + K+++
Sbjct: 836 VLVSVGSVEEVILERAKQKMGIDAKVIQ 863
>AT5G18620.2 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1072
Length = 1072
Score = 250 bits (639), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 258/510 (50%), Gaps = 65/510 (12%)
Query: 396 GGLKI---PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH- 451
GG ++ P I L DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH
Sbjct: 179 GGTRLLTQPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHE 238
Query: 452 FSGMFKPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXX 510
+ G+ P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 YRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------- 285
Query: 511 XXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLD 570
E L+ + + +T++E L W Y ++D
Sbjct: 286 --------------------EELL---VAGKFDICVTSFEMAIKEKTTLRRFSWRYIIID 322
Query: 571 EGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAE 630
E H+I+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+
Sbjct: 323 EAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEW 382
Query: 631 FAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSL 690
F + + Q + VLR P+LLRR+K+DV LP K E +L +
Sbjct: 383 FQI--------SGENDQQEVVQQLHKVLR----PFLLRRLKSDVEKGLPPKKETILKVGM 430
Query: 691 TPEQVSSYRAFLASTEVEEILDGN--RNSLSGIDV-MRKICNHPDLLERDHALSNPDYGN 747
+ Q Y+A L E+++G R L I + +RK CNHP L + A P Y
Sbjct: 431 SQMQKQYYKALLQKDL--EVVNGGGERKRLLNIAMQLRKCCNHPYLFQ--GAEPGPPYTT 486
Query: 748 PER----SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTP 803
+ +GKM ++ ++L K++ RVL+F Q ++LDI E++L G+ Y R+DG+T
Sbjct: 487 GDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTG 546
Query: 804 VKYRMALIDEFNA-SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAW 862
R A I+ +N +E FVF+L+T+ GGLG NL A+ VI++D DWNP D+QA++RA
Sbjct: 547 GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 606
Query: 863 RIGQKRDVTVYRLITRGTIEEKVYHRQIYK 892
RIGQK++V V+R T IE KV R K
Sbjct: 607 RIGQKKEVQVFRFCTENAIEAKVIERAYKK 636
>AT5G18620.1 | Symbols: CHR17 | chromatin remodeling factor17 |
chr5:6196190-6202058 REVERSE LENGTH=1069
Length = 1069
Score = 250 bits (638), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 258/510 (50%), Gaps = 65/510 (12%)
Query: 396 GGLKI---PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALH- 451
GG ++ P I L DYQ G+ WL L+ GI+ DEMGLGKT+Q +S L LH
Sbjct: 179 GGTRLLTQPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHE 238
Query: 452 FSGMFKPSIIVCPVTLLRQWKREANKWYPKFH-VELLHDSAQDSAPKKKQXXXXXXXXXX 510
+ G+ P ++V P + L W E ++ P V+ L + P++++
Sbjct: 239 YRGINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGN------PEERRHIR------- 285
Query: 511 XXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLD 570
E L+ + + +T++E L W Y ++D
Sbjct: 286 --------------------EELL---VAGKFDICVTSFEMAIKEKTTLRRFSWRYIIID 322
Query: 571 EGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAE 630
E H+I+N N+ ++ + T +R+++TG P+QN L ELW+L +F+ P F+
Sbjct: 323 EAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEVFSSAETFDEW 382
Query: 631 FAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSL 690
F + + Q + VLR P+LLRR+K+DV LP K E +L +
Sbjct: 383 FQI--------SGENDQQEVVQQLHKVLR----PFLLRRLKSDVEKGLPPKKETILKVGM 430
Query: 691 TPEQVSSYRAFLASTEVEEILDGN--RNSLSGIDV-MRKICNHPDLLERDHALSNPDYGN 747
+ Q Y+A L E+++G R L I + +RK CNHP L + A P Y
Sbjct: 431 SQMQKQYYKALLQKDL--EVVNGGGERKRLLNIAMQLRKCCNHPYLFQ--GAEPGPPYTT 486
Query: 748 PER----SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTP 803
+ +GKM ++ ++L K++ RVL+F Q ++LDI E++L G+ Y R+DG+T
Sbjct: 487 GDHLVTNAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTG 546
Query: 804 VKYRMALIDEFNA-SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAW 862
R A I+ +N +E FVF+L+T+ GGLG NL A+ VI++D DWNP D+QA++RA
Sbjct: 547 GDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAH 606
Query: 863 RIGQKRDVTVYRLITRGTIEEKVYHRQIYK 892
RIGQK++V V+R T IE KV R K
Sbjct: 607 RIGQKKEVQVFRFCTENAIEAKVIERAYKK 636
>AT3G19210.1 | Symbols: ATRAD54, CHR25, RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=910
Length = 910
Score = 249 bits (637), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 171/566 (30%), Positives = 265/566 (46%), Gaps = 89/566 (15%)
Query: 411 YQKVGVQWLWE----LH--CQKAGGIIGDEMGLGKTVQVLSFLGALHFSG-----MFKPS 459
+Q+ GVQ++++ LH G I+ D+MGLGKT+Q ++ L L G M K +
Sbjct: 183 HQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKA 242
Query: 460 IIVCPVTLLRQWKREANKWY-PKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXX 518
IIV P +L+ W+ E KW + + L +S +D
Sbjct: 243 IIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDV----------------------- 279
Query: 519 XXXXXXGNSRKWESLINRVTRSESGL--LITTYEQLRILGDQLLDIE-WGYAVLDEGHKI 575
S I+ TR S L LI +YE R+ + E + DE H++
Sbjct: 280 ------------LSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRL 327
Query: 576 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 635
+N L R++++G P+QN L E +++ +F PG LG F + PI
Sbjct: 328 KNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPI 387
Query: 636 GVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQV 695
G AT + + A + L + ++LRR A ++ LP K V+ C +T Q
Sbjct: 388 ICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQS 447
Query: 696 SSYRAFLASTEVEEILDGNRNS---LSGIDVMRKICNHPDLLE----------------- 735
+ Y F++S ++ L N L+ I ++K+CNHP L+
Sbjct: 448 TLYNHFISSKNLKRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCL 507
Query: 736 ----------RDHALSNPDYGNPERSGKMKVVAQVL-NVWKEQGHRVLLFCQTQQMLDIF 784
R A + D E SGKM V++++L N+ ++ R++L Q LD+F
Sbjct: 508 EFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLF 567
Query: 785 ENFLTTSGHVYRRMDGHTPVKYRMALIDEFN-ASNEIFVFILTTKVGGLGTNLTGANRVI 843
+ + R+DG T + R L++ N + + F F+L++K GG G NL GANR++
Sbjct: 568 AQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLV 627
Query: 844 IFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNP 903
+FDPDWNP+ D QA R WR GQK+ V VYR ++ GTIEEKVY RQ+ K L K++++
Sbjct: 628 LFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGL-QKVIQHE 686
Query: 904 Q------QKRFFKARDMKDLFILNVD 923
Q Q D++DLF + D
Sbjct: 687 QTDNSTRQGNLLSTEDLRDLFSFHGD 712
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 246 bits (628), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 162/520 (31%), Positives = 258/520 (49%), Gaps = 62/520 (11%)
Query: 407 ALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFS-GMFKPSIIVCPV 465
ALF +Q + WL + I+ DEMGLGKTV +FL +L+F G+ +P +++ P+
Sbjct: 688 ALFAHQLEALNWLRRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPL 747
Query: 466 TLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXG 525
+ + W E + W P +V H SA+ A G
Sbjct: 748 STMPNWLSEFSLWAPLLNVVEYHGSAKGRA----------------IIRDYEWHAKNSTG 791
Query: 526 NSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLV 585
++K T + +L+TTYE + L + W V+DEGH+++N +++ +
Sbjct: 792 TTKK-------PTSYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSL 844
Query: 586 CKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATP 645
HR+++TG P+QN + E+++L +F+ P L FE F
Sbjct: 845 LNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSFPSLSSFEERFH------------- 891
Query: 646 LQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLAST 705
+++A + L+ L+ P++LRR+K D +P KTE ++ LT Q YRA L T
Sbjct: 892 -DLTSAEKVEE-LKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAML--T 947
Query: 706 EVEEILD------GNRNSLSGIDVMRKICNHPDLLERDHALSNPDYGNPE--------RS 751
+ +IL ++ L+ + +RK+CNHP L+ + P+ G+ E S
Sbjct: 948 KNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPG----TEPESGSLEFLHDMRIKAS 1003
Query: 752 GKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTT--SGHVYRRMDGHTPVKYRMA 809
K+ ++ +L V ++GHRVL+F Q ++LDI E++L + R+DG V R A
Sbjct: 1004 AKLTLLHSMLKVLHKEGHRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQA 1063
Query: 810 LIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRD 869
I FN FVF+L+T+ GLG NL A+ VII+D D+NP D+QA RA RIGQ +
Sbjct: 1064 AIARFNQDKNRFVFLLSTRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKR 1123
Query: 870 VTVYRLITRGTIEEKVYHRQIYKHFLTNKIL-KNPQQKRF 908
+ VYRL+ R ++EE++ K L + K+ QK F
Sbjct: 1124 LLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEF 1163
>AT3G19210.2 | Symbols: RAD54 | homolog of RAD54 |
chr3:6652799-6658876 REVERSE LENGTH=908
Length = 908
Score = 243 bits (619), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 263/565 (46%), Gaps = 89/565 (15%)
Query: 411 YQKVGVQWLWE----LH--CQKAGGIIGDEMGLGKTVQVLSFLGALHFSG-----MFKPS 459
+Q+ GVQ++++ LH G I+ D+MGLGKT+Q ++ L L G M K +
Sbjct: 183 HQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKA 242
Query: 460 IIVCPVTLLRQWKREANKWY-PKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXX 518
IIV P +L+ W+ E KW + + L +S +D
Sbjct: 243 IIVTPTSLVSNWEAEIKKWVGDRIQLIALCESTRDDV----------------------- 279
Query: 519 XXXXXXGNSRKWESLINRVTRSESGL--LITTYEQLRILGDQLLDIE-WGYAVLDEGHKI 575
S I+ TR S L LI +YE R+ + E + DE H++
Sbjct: 280 ------------LSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRL 327
Query: 576 RNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPI 635
+N L R++++G P+QN L E +++ +F PG LG F + PI
Sbjct: 328 KNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPI 387
Query: 636 GVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQV 695
G AT + + A + L + ++LRR A ++ LP K V+ C +T Q
Sbjct: 388 ICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQ- 446
Query: 696 SSYRAFLASTEVEEILDGNRNS--LSGIDVMRKICNHPDLLE------------------ 735
++Y L + D + + L+ I ++K+CNHP L+
Sbjct: 447 TTYNGCLCMQLKRALADNAKQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLE 506
Query: 736 ---------RDHALSNPDYGNPERSGKMKVVAQVL-NVWKEQGHRVLLFCQTQQMLDIFE 785
R A + D E SGKM V++++L N+ ++ R++L Q LD+F
Sbjct: 507 FFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFA 566
Query: 786 NFLTTSGHVYRRMDGHTPVKYRMALIDEFN-ASNEIFVFILTTKVGGLGTNLTGANRVII 844
+ + R+DG T + R L++ N + + F F+L++K GG G NL GANR+++
Sbjct: 567 QLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKAGGCGLNLIGANRLVL 626
Query: 845 FDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 904
FDPDWNP+ D QA R WR GQK+ V VYR ++ GTIEEKVY RQ+ K L K++++ Q
Sbjct: 627 FDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQMSKEGL-QKVIQHEQ 685
Query: 905 ------QKRFFKARDMKDLFILNVD 923
Q D++DLF + D
Sbjct: 686 TDNSTRQGNLLSTEDLRDLFSFHGD 710
>AT4G31900.1 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1202
Length = 1202
Score = 241 bits (614), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 252/495 (50%), Gaps = 64/495 (12%)
Query: 401 PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFKPSI 460
P+ + L YQ G+ +L +K I+ DEMGLGKT+Q ++FL +L F P +
Sbjct: 218 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASL-FEENLSPHL 276
Query: 461 IVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 520
+V P++ +R W+RE W P +V + ++
Sbjct: 277 VVAPLSTIRNWEREFATWAPHMNVVMYTGDSE---------------------------- 308
Query: 521 XXXXGNSRKWES--LINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNP 578
WE + +S+ +L+TTYE + L I+W ++DEGH+++N
Sbjct: 309 ----ARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQ 364
Query: 579 NAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVG 638
+++ Q + H +++TG P+QN L EL++L F+ K G L F+
Sbjct: 365 KSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQD--------- 415
Query: 639 GYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADV-NAQLPNKTEHVLFCSLTPEQVSS 697
N Q+S L ++ P+LLRR+K DV ++P K E +L ++ +Q
Sbjct: 416 --INKEE-QISR-------LHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEV 465
Query: 698 YRAFLASTEVEEILDGNRNS-LSGIDV-MRKICNHPDLL---ERDHALSNPDYGN-PERS 751
Y+A + T ++L R++ +S + + +R++C+HP LL E +N + E S
Sbjct: 466 YKAVI--TNNYQVLTKKRDAKISNVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEAS 523
Query: 752 GKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALI 811
GK++++ +++ KEQGHRVL++ Q Q L + E++ T Y R+DG R I
Sbjct: 524 GKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRI 583
Query: 812 DEFNASNE-IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 870
D FNA N F F+L+T+ GG+G NL A+ VII+D DWNP D+QA R R+GQ V
Sbjct: 584 DRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKV 643
Query: 871 TVYRLITRGTIEEKV 885
+YRLI +GT+EE++
Sbjct: 644 MIYRLIHKGTVEERM 658
>AT4G31900.2 | Symbols: PKR2 | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD LENGTH=1161
Length = 1161
Score = 240 bits (612), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 252/495 (50%), Gaps = 64/495 (12%)
Query: 401 PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHFSGMFKPSI 460
P+ + L YQ G+ +L +K I+ DEMGLGKT+Q ++FL +L F P +
Sbjct: 177 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASL-FEENLSPHL 235
Query: 461 IVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXX 520
+V P++ +R W+RE W P +V + ++
Sbjct: 236 VVAPLSTIRNWEREFATWAPHMNVVMYTGDSE---------------------------- 267
Query: 521 XXXXGNSRKWES--LINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNP 578
WE + +S+ +L+TTYE + L I+W ++DEGH+++N
Sbjct: 268 ----ARDVIWEHEFYFSEGRKSKFDVLLTTYEMVHPGISVLSPIKWTCMIIDEGHRLKNQ 323
Query: 579 NAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVG 638
+++ Q + H +++TG P+QN L EL++L F+ K G L F+
Sbjct: 324 KSKLYSSLSQFTSKHIVLLTGTPLQNNLNELFALMHFLDADKFGSLEKFQD--------- 374
Query: 639 GYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADV-NAQLPNKTEHVLFCSLTPEQVSS 697
N Q+S L ++ P+LLRR+K DV ++P K E +L ++ +Q
Sbjct: 375 --INKEE-QISR-------LHQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEV 424
Query: 698 YRAFLASTEVEEILDGNRNS-LSGIDV-MRKICNHPDLL---ERDHALSNPDYGN-PERS 751
Y+A + T ++L R++ +S + + +R++C+HP LL E +N + E S
Sbjct: 425 YKAVI--TNNYQVLTKKRDAKISNVLMKLRQVCSHPYLLPDFEPRFEDANEAFTKLLEAS 482
Query: 752 GKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALI 811
GK++++ +++ KEQGHRVL++ Q Q L + E++ T Y R+DG R I
Sbjct: 483 GKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRI 542
Query: 812 DEFNASNE-IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 870
D FNA N F F+L+T+ GG+G NL A+ VII+D DWNP D+QA R R+GQ V
Sbjct: 543 DRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKV 602
Query: 871 TVYRLITRGTIEEKV 885
+YRLI +GT+EE++
Sbjct: 603 MIYRLIHKGTVEERM 617
>AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1, ATDDM1
| chromatin remodeling 1 | chr5:26649050-26652869
FORWARD LENGTH=764
Length = 764
Score = 233 bits (594), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 174/598 (29%), Positives = 281/598 (46%), Gaps = 75/598 (12%)
Query: 328 REAEPNKDSKRKRKRPLPGRQWTNRVSREDMQL-----EDSENANGCLDTSDQENLGAQD 382
++AEP K + R RKR + + R + ED E N L T ++ + Q+
Sbjct: 134 QKAEPEK-TGRGRKRKAASQYNNTKAKRAVAAMISRSKEDGETINSDL-TEEETVIKLQN 191
Query: 383 DLADHESSYVTLEGGLKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQ 442
+L L GG L YQ GV+WL L GI+ D+MGLGKT+Q
Sbjct: 192 ELCP------LLTGG---------QLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQ 236
Query: 443 VLSFLGALHFSGMFKPSIIVCPVTLLRQWKREANKWYPKFHVELLH-DSAQDSAPKKKQX 501
+ FL L +G+ P +++ P++ L W E ++ P + + H D Q ++K
Sbjct: 237 TIGFLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELRRKH- 295
Query: 502 XXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLL- 560
+ + + ++IT+YE ++L
Sbjct: 296 --------------------------------MPKTVGPKFPIVITSYEVAMNDAKRILR 323
Query: 561 DIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGK 620
W Y V+DEGH+++N ++ K L+ +++++TG P+QN L+ELWSL +F+ P
Sbjct: 324 HYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDI 383
Query: 621 LGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRCAVV--LRDLIMPYLLRRMKADVNAQL 678
FE+ F N + R VV L ++ P++LRRMK DV L
Sbjct: 384 FTSHDEFESWFDFS---EKNKNEATKEEEEKRRAQVVSKLHGILRPFILRRMKCDVELSL 440
Query: 679 PNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGN-------RNSLSGIDV-MRKICNH 730
P K E +++ ++T Q ++ L + +E L N + L+ + + +RK CNH
Sbjct: 441 PRKKEIIMYATMTDHQ-KKFQEHLVNNTLEAHLGENAIRGQGWKGKLNNLVIQLRKNCNH 499
Query: 731 PDLLERD---HALSNPDYGNPERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENF 787
PDLL+ L P + GK +++ ++L H+VL+F Q ++LDI + +
Sbjct: 500 PDLLQGQIDGSYLYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYY 559
Query: 788 LTTSGHVYRRMDGHTPVKYRMALIDEF-NASNEIFVFILTTKVGGLGTNLTGANRVIIFD 846
+ G R+DG + R I +F + + +F+L+T+ GGLG NLT A+ I++D
Sbjct: 560 FSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYD 619
Query: 847 PDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQ 904
DWNP D+QA +R RIGQ + V VYRL T +IE +V R K L + ++ Q
Sbjct: 620 SDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIGQGQ 677
>AT2G44980.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552343-18556669
REVERSE LENGTH=877
Length = 877
Score = 223 bits (569), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 257/547 (46%), Gaps = 87/547 (15%)
Query: 411 YQKVGVQWLWELHCQKAGGIIG-DEMGLGKTVQVLSFLGALHF-SGMFKPSIIVCPVTLL 468
+Q GV WL + + ++ D+MGLGKT+Q +SFL L F G+ P +++CP+++
Sbjct: 54 HQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVT 113
Query: 469 RQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSR 528
W E N++ P V + R
Sbjct: 114 DGWVSEINRFTPNLEV------------------------------LRYVGDKYCRLDMR 143
Query: 529 KWESLINRVTRSESG------LLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEV 582
K S+ + V +S G +L+TTY+ + D L I W YA++DE +++NPN+ +
Sbjct: 144 K--SMYDHVKKSSKGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVL 201
Query: 583 -TLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFA-VPIGVGGY 640
++ +Q R+++TG PIQN LTELW+L F P G L F + F G+ G
Sbjct: 202 YNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFKETGDGLSG- 260
Query: 641 ANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADV----NAQLPNKTEHVLFCSLTPEQVS 696
L VS L+ ++ ++LRR K+ + N LP TE + L Q
Sbjct: 261 -----LDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKK 315
Query: 697 SYRAFLASTEVEEILD-----GNRNSLSGIDV-MRKICNHPDLL---------ERDHALS 741
Y + L E+ +L+ N SL I + +RK C+HP L E +H +
Sbjct: 316 IYTSIL-RKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLV- 373
Query: 742 NPDYGNPERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGH 801
+ SGK+ V+ Q+L + GHRVLLF Q LDI ++F+ + Y R+DG
Sbjct: 374 -------QASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGS 426
Query: 802 TPVKYRMALIDEFNASNE-----------IFVFILTTKVGGLGTNLTGANRVIIFDPDWN 850
+ R A I F+A E FVF+++T+ GG+G NL A+ VI ++ DWN
Sbjct: 427 VRAEERFAAIKNFSAKTERGLDSEVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWN 486
Query: 851 PSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFK 910
P D QA +RA RIGQ V L+T ++EE + R K L++ ++ + +++
Sbjct: 487 PQVDKQALQRAHRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEED 546
Query: 911 ARDMKDL 917
D++ L
Sbjct: 547 GGDLRSL 553
>AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:523481-526884 FORWARD LENGTH=763
Length = 763
Score = 222 bits (566), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 174/613 (28%), Positives = 271/613 (44%), Gaps = 140/613 (22%)
Query: 379 GAQDDLADHESSYV------TLEGGLKIPDNIFEALFD-YQKVGVQWLWELHCQKA-GGI 430
G D ++ E+S V ++ K D+ F+ + YQ VGV +L L+ + G I
Sbjct: 177 GVTDRYSEVETSTVRIVTQNDIDDACKAEDSDFQPILKPYQLVGVNFLLLLYKKGIEGAI 236
Query: 431 IGDEMGLGKTVQVLSFLGAL-HFSGMFKPSIIVCPVTLLRQWKREANKWYPKFHVELLHD 489
+ DEMGLGKT+Q +++L L + P ++VCP ++L W+RE KW P F V H
Sbjct: 237 LADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPASVLENWERELRKWCPSFTVLQYHG 296
Query: 490 SAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTY 549
+A+ SR+ SL +L+ Y
Sbjct: 297 AAR-------------------------------AAYSRELNSLSKAGKPPPFNVLLVCY 325
Query: 550 EQLRILGDQLLD-------IEWGYAVLDEGHKIRNPNAEVTLVCKQLQTV-----HRIIM 597
+Q D W ++DE H +++ N + K L +V R+++
Sbjct: 326 SLFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKN---SYRWKNLMSVARNANQRLML 382
Query: 598 TGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRCAVV 657
TG P+QN L ELWSL +F+ P +F E + + NA ++ T
Sbjct: 383 TGTPLQNDLHELWSLLEFMLPD------IFTTE---NVDLKKLLNAEDTELITR------ 427
Query: 658 LRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFL------ASTEVEEIL 711
++ ++ P++LRR+K+DV QL K + V + + +Q +Y+ + + + ++
Sbjct: 428 MKSILGPFILRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLS 487
Query: 712 DGNRNSLSG----------IDVMRKICNHPDLLERDHALSNPD----------------- 744
+ NSL+ RKI NHP L+ R + S+ D
Sbjct: 488 SKSLNSLAKALPKRQISNYFTQFRKIANHPLLIRRIY--SDEDVIRIARKLHPIGAFGFE 545
Query: 745 ------------------------YGNPERSG-----------KMKVVAQVLNVWKEQGH 769
YG + G K + +A++L K+ GH
Sbjct: 546 CSLDRVIEEVKGFNDFRIHQLLFQYGVNDTKGTLSDKHVMLSAKCRTLAELLPSMKKSGH 605
Query: 770 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKV 829
RVL+F Q MLDI E L G YRR+DG T V R ++D FN IF +L+T+
Sbjct: 606 RVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTRA 665
Query: 830 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQ 889
GG G NLTGA+ VII D D+NP D QA +R RIGQ + VT++RL+T+ T++E +Y
Sbjct: 666 GGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEIA 725
Query: 890 IYKHFLTNKILKN 902
K L +L++
Sbjct: 726 KRKLVLDAAVLES 738
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 186/669 (27%), Positives = 281/669 (42%), Gaps = 159/669 (23%)
Query: 384 LADHESSYVTL------EGGLKIPDNIFEALFDYQKVGVQWLWELHCQKA---------- 427
L D S Y+ E +++P +I L +Q G++++WE Q
Sbjct: 689 LGDAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGL 748
Query: 428 GGIIGDEMGLGKTVQVLSFLGALHFSGM------FKPSIIVCPVTLLRQWKREANKWYPK 481
G I+ MGLGKT QV++FL ++ M K ++IV PV +L W+ E KW P
Sbjct: 749 GCILAHTMGLGKTFQVIAFL----YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPS 804
Query: 482 ----FHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRV 537
+ +L D +++ R+++ L
Sbjct: 805 EVKPLRIFMLGDVSRE----------------------------------RRFDLLTK-- 828
Query: 538 TRSESGLLITTYEQLRIL----GDQLLDIEWGYA----------VLDEGHKIRNPNAEVT 583
R + G+ + Y R L G + L+ G V DE H I+N A+ T
Sbjct: 829 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 888
Query: 584 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 643
KQ++ RI +TG+P+QN L E + + DFV G LG P F F PI G + N+
Sbjct: 889 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNS 948
Query: 644 TPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLA 703
T V + + +L + + ++ R V LP KT V+ L+P Q Y+ FL
Sbjct: 949 TAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL- 1007
Query: 704 STEVEEILDGN------RNSLSGIDVMRKICNH----------------------PD--- 732
E+ DG +N + V+ +I NH PD
Sbjct: 1008 --ELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCS 1065
Query: 733 ---------------------------LLERD---HALSNPDYGNPERSGKMKVVAQVLN 762
L++D L +Y + SGKM ++ +L+
Sbjct: 1066 SDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS 1125
Query: 763 VWKEQGHRVLLFCQTQQMLDIFENFLT------------TSGHVYRRMDGHTPVKYRMAL 810
+ + G + L+F Q+ LD+ E +L+ G + R+DG T R L
Sbjct: 1126 MSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKL 1185
Query: 811 IDEFNASN--EIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKR 868
+D FN + + +++T+ G LG NL ANRVII D WNP+ D+QA RAWR GQK+
Sbjct: 1186 VDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKK 1245
Query: 869 DVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFILNVDGDTGS 928
V YRL+ RGTIEEK+Y RQ+ K L +++ Q R +M LF + D D S
Sbjct: 1246 PVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFD-DDDEKS 1304
Query: 929 TETSNIFSQ 937
+ I Q
Sbjct: 1305 EAVTEISKQ 1313
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 186/669 (27%), Positives = 281/669 (42%), Gaps = 159/669 (23%)
Query: 384 LADHESSYVTL------EGGLKIPDNIFEALFDYQKVGVQWLWELHCQKA---------- 427
L D S Y+ E +++P +I L +Q G++++WE Q
Sbjct: 689 LGDAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGL 748
Query: 428 GGIIGDEMGLGKTVQVLSFLGALHFSGM------FKPSIIVCPVTLLRQWKREANKWYPK 481
G I+ MGLGKT QV++FL ++ M K ++IV PV +L W+ E KW P
Sbjct: 749 GCILAHTMGLGKTFQVIAFL----YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPS 804
Query: 482 ----FHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRV 537
+ +L D +++ R+++ L
Sbjct: 805 EVKPLRIFMLGDVSRE----------------------------------RRFDLLTK-- 828
Query: 538 TRSESGLLITTYEQLRIL----GDQLLDIEWGYA----------VLDEGHKIRNPNAEVT 583
R + G+ + Y R L G + L+ G V DE H I+N A+ T
Sbjct: 829 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 888
Query: 584 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 643
KQ++ RI +TG+P+QN L E + + DFV G LG P F F PI G + N+
Sbjct: 889 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNS 948
Query: 644 TPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLA 703
T V + + +L + + ++ R V LP KT V+ L+P Q Y+ FL
Sbjct: 949 TAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL- 1007
Query: 704 STEVEEILDGN------RNSLSGIDVMRKICNH----------------------PD--- 732
E+ DG +N + V+ +I NH PD
Sbjct: 1008 --ELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCS 1065
Query: 733 ---------------------------LLERD---HALSNPDYGNPERSGKMKVVAQVLN 762
L++D L +Y + SGKM ++ +L+
Sbjct: 1066 SDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS 1125
Query: 763 VWKEQGHRVLLFCQTQQMLDIFENFLT------------TSGHVYRRMDGHTPVKYRMAL 810
+ + G + L+F Q+ LD+ E +L+ G + R+DG T R L
Sbjct: 1126 MSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKL 1185
Query: 811 IDEFNASN--EIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKR 868
+D FN + + +++T+ G LG NL ANRVII D WNP+ D+QA RAWR GQK+
Sbjct: 1186 VDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKK 1245
Query: 869 DVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFILNVDGDTGS 928
V YRL+ RGTIEEK+Y RQ+ K L +++ Q R +M LF + D D S
Sbjct: 1246 PVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFD-DDDEKS 1304
Query: 929 TETSNIFSQ 937
+ I Q
Sbjct: 1305 EAVTEISKQ 1313
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 186/669 (27%), Positives = 281/669 (42%), Gaps = 159/669 (23%)
Query: 384 LADHESSYVTL------EGGLKIPDNIFEALFDYQKVGVQWLWELHCQKA---------- 427
L D S Y+ E +++P +I L +Q G++++WE Q
Sbjct: 689 LGDAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGL 748
Query: 428 GGIIGDEMGLGKTVQVLSFLGALHFSGM------FKPSIIVCPVTLLRQWKREANKWYPK 481
G I+ MGLGKT QV++FL ++ M K ++IV PV +L W+ E KW P
Sbjct: 749 GCILAHTMGLGKTFQVIAFL----YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPS 804
Query: 482 ----FHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRV 537
+ +L D +++ R+++ L
Sbjct: 805 EVKPLRIFMLGDVSRE----------------------------------RRFDLLTK-- 828
Query: 538 TRSESGLLITTYEQLRIL----GDQLLDIEWGYA----------VLDEGHKIRNPNAEVT 583
R + G+ + Y R L G + L+ G V DE H I+N A+ T
Sbjct: 829 WRKKGGVFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDILVCDEAHIIKNTKADTT 888
Query: 584 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANA 643
KQ++ RI +TG+P+QN L E + + DFV G LG P F F PI G + N+
Sbjct: 889 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNS 948
Query: 644 TPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLA 703
T V + + +L + + ++ R V LP KT V+ L+P Q Y+ FL
Sbjct: 949 TAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRILYQRFL- 1007
Query: 704 STEVEEILDGN------RNSLSGIDVMRKICNH----------------------PD--- 732
E+ DG +N + V+ +I NH PD
Sbjct: 1008 --ELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDSKNGRRGSIVDIPDDCS 1065
Query: 733 ---------------------------LLERD---HALSNPDYGNPERSGKMKVVAQVLN 762
L++D L +Y + SGKM ++ +L+
Sbjct: 1066 SDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYKVSDFSGKMILLLDILS 1125
Query: 763 VWKEQGHRVLLFCQTQQMLDIFENFLT------------TSGHVYRRMDGHTPVKYRMAL 810
+ + G + L+F Q+ LD+ E +L+ G + R+DG T R L
Sbjct: 1126 MSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKL 1185
Query: 811 IDEFNASN--EIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKR 868
+D FN + + +++T+ G LG NL ANRVII D WNP+ D+QA RAWR GQK+
Sbjct: 1186 VDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKK 1245
Query: 869 DVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLFILNVDGDTGS 928
V YRL+ RGTIEEK+Y RQ+ K L +++ Q R +M LF + D D S
Sbjct: 1246 PVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFD-DDDEKS 1304
Query: 929 TETSNIFSQ 937
+ I Q
Sbjct: 1305 EAVTEISKQ 1313
>AT2G44980.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein | chr2:18552440-18556669
REVERSE LENGTH=851
Length = 851
Score = 219 bits (559), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 161/536 (30%), Positives = 254/536 (47%), Gaps = 84/536 (15%)
Query: 411 YQKVGVQWLWELHCQKAGGIIG-DEMGLGKTVQVLSFLGALHF-SGMFKPSIIVCPVTLL 468
+Q GV WL + + ++ D+MGLGKT+Q +SFL L F G+ P +++CP+++
Sbjct: 54 HQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPLSVT 113
Query: 469 RQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSR 528
W E N++ P V G+
Sbjct: 114 DGWVSEINRFTPNLEV------------------------------------LRYVGD-- 135
Query: 529 KWESLINRVTRSESG------LLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEV 582
K+ L R + + G +L+TTY+ + D L I W YA++DE +++NPN+ +
Sbjct: 136 KYCRLDMRKSMYDHGHFLPFDVLLTTYDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVL 195
Query: 583 -TLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYA 641
++ +Q R+++TG PIQN LTELW+L F P G L F + F G G
Sbjct: 196 YNVLLEQFLIPRRLLITGTPIQNNLTELWALMHFCMPLVFGTLDQFLSAFK-ETGDG--- 251
Query: 642 NATPLQVSTAYRCAVVLRDLIMPYLLRRMKADV----NAQLPNKTEHVLFCSLTPEQVSS 697
L VS L+ ++ ++LRR K+ + N LP TE + L Q
Sbjct: 252 ----LDVSNDKETYKSLKFILGAFMLRRTKSLLIESGNLVLPPLTELTVMVPLVSLQKKI 307
Query: 698 YRAFLASTEVEEILD-----GNRNSLSGIDV-MRKICNHPDLL---------ERDHALSN 742
Y + L E+ +L+ N SL I + +RK C+HP L E +H +
Sbjct: 308 YTSIL-RKELPGLLELSSGGSNHTSLQNIVIQLRKACSHPYLFPGIEPEPFEEGEHLV-- 364
Query: 743 PDYGNPERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHT 802
+ SGK+ V+ Q+L + GHRVLLF Q LDI ++F+ + Y R+DG
Sbjct: 365 ------QASGKLLVLDQLLKRLHDSGHRVLLFSQMTSTLDILQDFMELRRYSYERLDGSV 418
Query: 803 PVKYRMALIDEFNA-SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERA 861
+ R A I F+ + FVF+++T+ GG+G NL A+ VI ++ DWNP D QA +RA
Sbjct: 419 RAEERFAAIKNFSVDGSNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRA 478
Query: 862 WRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDL 917
RIGQ V L+T ++EE + R K L++ ++ + +++ D++ L
Sbjct: 479 HRIGQISHVLSINLVTEHSVEEVILRRAERKLQLSHNVVGDNMEEKEEDGGDLRSL 534
>AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2192
Length = 2192
Score = 219 bits (558), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 235/491 (47%), Gaps = 69/491 (14%)
Query: 408 LFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGAL-HFSGMFKPSIIVCPVT 466
L DYQ VG+QW+ L+ K GI+ DEMGLGKTVQV++ + L F G + P +I+ P
Sbjct: 981 LRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1040
Query: 467 LLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGN 526
+L WK E + W P + + +D K
Sbjct: 1041 VLVNWKSELHTWLPSVSC-IYYVGTKDQRSK----------------------------- 1070
Query: 527 SRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLVC 586
L ++V + +L+TTYE + +L ++W Y ++DE ++++ + +
Sbjct: 1071 ------LFSQVKFEKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1124
Query: 587 KQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYA-NATP 645
+ + R+++TG P+QN L ELWSL + + P F FA P G A N
Sbjct: 1125 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIED 1184
Query: 646 LQVSTAYRCAVV--LRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLA 703
+ T + V+ L ++ P++LRR DV LP K VL C ++ Q + Y A
Sbjct: 1185 DWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKA 1244
Query: 704 STEV-----EEILDGNRNSLSGIDV----------MRKICNHPDLLERDHALSNPDYGNP 748
+ + +E L +N + + +RK CNHP L+ P + +
Sbjct: 1245 TGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHP-------LLNYPYFNDF 1297
Query: 749 ER------SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHT 802
+ GK+ ++ ++L + GHRVLLF ++LDI E +L VYRR+DG T
Sbjct: 1298 SKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTT 1357
Query: 803 PVKYRMALIDEFN-ASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERA 861
++ R + I +FN + F+F+L+ + G G NL A+ V+I+DPD NP + QA RA
Sbjct: 1358 SLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARA 1417
Query: 862 WRIGQKRDVTV 872
RIGQ R+V V
Sbjct: 1418 HRIGQTREVKV 1428
>AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative |
chr2:18923304-18931769 FORWARD LENGTH=2193
Length = 2193
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 151/492 (30%), Positives = 230/492 (46%), Gaps = 70/492 (14%)
Query: 408 LFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGAL-HFSGMFKPSIIVCPVT 466
L DYQ VG+QW+ L+ K GI+ DEMGLGKTVQV++ + L F G + P +I+ P
Sbjct: 981 LRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYGPHLIIVPNA 1040
Query: 467 LLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGN 526
+L WK E + W P + + +D K
Sbjct: 1041 VLVNWKSELHTWLPSVSC-IYYVGTKDQRSKL---------------------------- 1071
Query: 527 SRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVTLVC 586
V + +L+TTYE + +L ++W Y ++DE ++++ + +
Sbjct: 1072 ------FSQEVCAMKFNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDL 1125
Query: 587 KQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYA-NATP 645
+ + R+++TG P+QN L ELWSL + + P F FA P G A N
Sbjct: 1126 DRYRCQRRLLLTGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIED 1185
Query: 646 LQVSTAYRCAVV--LRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLA 703
+ T + V+ L ++ P++LRR DV LP K VL C ++ Q + Y A
Sbjct: 1186 DWLETEKKVIVIHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKA 1245
Query: 704 STEV-----EEILDGNRNSLSGIDV----------MRKICNHPDLLERDHALSNPDYGNP 748
+ + +E L +N + + +RK CNHP L N Y N
Sbjct: 1246 TGTLRVDPDDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHP--------LLNYPYFND 1297
Query: 749 -------ERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGH 801
GK+ ++ ++L + GHRVLLF ++LDI E +L VYRR+DG
Sbjct: 1298 FSKDFLVRSCGKLWILDRILIKLQRTGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGT 1357
Query: 802 TPVKYRMALIDEFN-ASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARER 860
T ++ R + I +FN + F+F+L+ + G G NL A+ V+I+DPD NP + QA R
Sbjct: 1358 TSLEDRESAIVDFNDPDTDCFIFLLSIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVAR 1417
Query: 861 AWRIGQKRDVTV 872
A RIGQ R+V V
Sbjct: 1418 AHRIGQTREVKV 1429
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 190 bits (482), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 200/445 (44%), Gaps = 79/445 (17%)
Query: 568 VLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVF 627
V DE H I+N A+ T KQ++ RI +TG+P+QN L E + + DFV G LG P F
Sbjct: 852 VCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEF 911
Query: 628 EAEFAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLF 687
F PI G + N+T V + + +L + + ++ R V LP KT V+
Sbjct: 912 RNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIS 971
Query: 688 CSLTPEQVSSYRAFLASTEVEEILDGN------RNSLSGIDVMRKICNH----------- 730
L+P Q Y+ FL E+ DG +N + V+ +I NH
Sbjct: 972 VKLSPLQRILYQRFL---ELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQLRSEDS 1028
Query: 731 -----------PD------------------------------LLERD---HALSNPDYG 746
PD L++D L +Y
Sbjct: 1029 KNGRRGSIVDIPDDCSSDENIDYNMVTGEKQRTMNDLQDKVDGYLQKDWWVDLLQKNNYK 1088
Query: 747 NPERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLT------------TSGHV 794
+ SGKM ++ +L++ + G + L+F Q+ LD+ E +L+ G
Sbjct: 1089 VSDFSGKMILLLDILSMSADVGDKALVFSQSIPTLDLIELYLSRVPRHGKQGKFWKKGKD 1148
Query: 795 YRRMDGHTPVKYRMALIDEFNASN--EIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPS 852
+ R+DG T R L+D FN + + +++T+ G LG NL ANRVII D WNP+
Sbjct: 1149 WYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPT 1208
Query: 853 TDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKAR 912
D+QA RAWR GQK+ V YRL+ RGTIEEK+Y RQ+ K L +++ Q R
Sbjct: 1209 YDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKE 1268
Query: 913 DMKDLFILNVDGDTGSTETSNIFSQ 937
+M LF + D D S + I Q
Sbjct: 1269 EMLHLFEFD-DDDEKSEAVTEISKQ 1292
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 26/119 (21%)
Query: 384 LADHESSYVTL------EGGLKIPDNIFEALFDYQKVGVQWLWELHCQKA---------- 427
L D S Y+ E +++P +I L +Q G++++WE Q
Sbjct: 689 LGDAHSGYIVNVVREIGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGL 748
Query: 428 GGIIGDEMGLGKTVQVLSFLGALHFSGM------FKPSIIVCPVTLLRQWKREANKWYP 480
G I+ MGLGKT QV++FL ++ M K ++IV PV +L W+ E KW P
Sbjct: 749 GCILAHTMGLGKTFQVIAFL----YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMP 803
>AT1G03750.1 | Symbols: CHR9 | switch 2 | chr1:937920-941068 FORWARD
LENGTH=862
Length = 862
Score = 180 bits (456), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 146/231 (63%), Gaps = 12/231 (5%)
Query: 744 DYGNPERSGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTP 803
D + + GKM+ + +++ W +G ++LLF + +MLDI E FL G+ + R+DG TP
Sbjct: 520 DLSDVKHCGKMRALEKLMASWISKGDKILLFSYSVRMLDILEKFLIRKGYSFARLDGSTP 579
Query: 804 VKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWR 863
R +L+D+FNAS VF+++TK GGLG NL ANRV+IFDP+WNPS D+QA++R++R
Sbjct: 580 TNLRQSLVDDFNASPSKQVFLISTKAGGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFR 639
Query: 864 IGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKA-RDMKDLFILNV 922
GQKR V V+RL++ G++EE VY RQ+YK L+N + + R+F+ +D K+
Sbjct: 640 YGQKRHVVVFRLLSAGSLEELVYTRQVYKQQLSNIAVAGKMETRYFEGVQDCKEF----- 694
Query: 923 DGDTGSTETSNIFSQISEEV---NVIGSHID-NQDKHQYNQTAEAGSGDDD 969
G+ SN+F +S+++ +++ H D N D+++ E G +D+
Sbjct: 695 QGELFG--ISNLFRDLSDKLFTSDIVELHRDSNIDENKKRSLLETGVSEDE 743
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 168/343 (48%), Gaps = 50/343 (14%)
Query: 398 LKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGALHF----- 452
+ +P +I L ++Q+ GV++++ L+ GGI+GD+MGLGKT+Q ++FL A++
Sbjct: 129 IHVPASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDA 188
Query: 453 --SGMFK----PSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXX 506
S + + P +I+CP +++ W+ E ++W F V + H S +D
Sbjct: 189 GESCLLESDKGPVLIICPSSIIHNWESEFSRWASFFKVSVYHGSNRDM------------ 236
Query: 507 XXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGY 566
++ ++ +L+T+++ RI G L I W
Sbjct: 237 --------------------------ILEKLKARGVEVLVTSFDTFRIQGPVLSGINWEI 270
Query: 567 AVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPV 626
+ DE H+++N +++ C +++T RI +TG +QNK++EL++LF++V PG LG
Sbjct: 271 VIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFNLFEWVAPGSLGTREH 330
Query: 627 FEAEFAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQL-PNKTEHV 685
F + P+ +G A A V A + L L+ Y+LRR K + L K ++V
Sbjct: 331 FRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRRTKEETIGHLMMGKEDNV 390
Query: 686 LFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDVMRKIC 728
+FC ++ Q Y+ + E++ +++ + G + + C
Sbjct: 391 VFCQMSQLQRRVYQRMIQLPEIQCLVNKDNPCACGSPLKQSEC 433
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/350 (32%), Positives = 169/350 (48%), Gaps = 45/350 (12%)
Query: 390 SYVTLEGGLKIPDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGA 449
+Y T + K+P + +L +YQ +G+ WL ++ +K GI+ DEMGLGKT+ ++ L
Sbjct: 518 TYSTTKVRTKLPFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAH 577
Query: 450 LHFS-GMFKPSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXX 508
L G++ P +IV P +++ W+ E KW P F + SA++ K++
Sbjct: 578 LACDKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQ--------- 628
Query: 509 XXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLD-IEWGYA 567
W L + + ITTY +L I ++ +W Y
Sbjct: 629 --------------------GWMKL------NSFHVCITTY-RLVIQDSKMFKRKKWKYL 661
Query: 568 VLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVF 627
+LDE H I+N ++ + RI++TG P+QN L ELWSL F+ P F
Sbjct: 662 ILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHVFQSHQEF 721
Query: 628 EAEFAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLF 687
+ F PI G + R VLR P+LLRR+K DV QLP+K EHV+F
Sbjct: 722 KDWFCNPIA-GMVEGQEKINKEVIDRLHNVLR----PFLLRRLKRDVEKQLPSKHEHVIF 776
Query: 688 CSLTPEQVSSYRAFLASTEVEEILDGNR--NSLSGIDVMRKICNHPDLLE 735
C L+ Q + Y F+ASTE + L +S I +RK+CNHPDL E
Sbjct: 777 CRLSKRQRNLYEDFIASTETQATLTSGSFFGMISIIMQLRKVCNHPDLFE 826
Score = 160 bits (406), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 154/284 (54%), Gaps = 36/284 (12%)
Query: 650 TAYRCAVVLRDLIMPYLLRRMK----------ADVNAQLPNKTEHVLFCSLTPEQVSSYR 699
++Y + +L D+++ + R K A A++P+ T +CS + V
Sbjct: 980 SSYMYSSILADIVLSPIERFQKMIELVEAFTFAIPAARVPSPT---CWCSKSDSPV---- 1032
Query: 700 AFLASTEVEEILDGNRNSLSGI--DVMRKICNHPD--LLERDHALSNPDYGNPERSGKMK 755
FL+ + E++ D LS I ++R+ PD L++ D GK++
Sbjct: 1033 -FLSPSYKEKVTDLLSPLLSPIRPAIVRRQVYFPDRRLIQFD-------------CGKLQ 1078
Query: 756 VVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFN 815
+A +L K GHR L+F Q +MLD+ E F+ G+ Y R+DG TP + R L+ FN
Sbjct: 1079 ELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFN 1138
Query: 816 ASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRL 875
+ +IF+FIL+T+ GG+G NL GA+ VI +D DWNP+ D QA++R RIGQ R+V +YRL
Sbjct: 1139 TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRL 1198
Query: 876 ITRGTIEEKVYHRQIYKHFLTNKILKNPQ-QKRFFKARDMKDLF 918
I+ TIEE + + K L N +++N + FFK D +LF
Sbjct: 1199 ISESTIEENILKKANQKRVLDNLVIQNGEYNTEFFKKLDPMELF 1242
>AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1507
Length = 1507
Score = 152 bits (383), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 182/413 (44%), Gaps = 53/413 (12%)
Query: 347 RQWTNRVSREDMQLEDSENANGCLDTSDQENLGAQDDLADHESSYVTLEGGLKIPDNIFE 406
+Q T+ E M+L + G L+ ++ ++ H S + + ++ P+
Sbjct: 528 KQITDAFDTEYMKLRQTSEMEGPLNDI---SVSGSSNIDLHNPSTMPVTSTVQTPELFKG 584
Query: 407 ALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGAL-HFSGMFKPSIIVCPV 465
L +YQ G+QWL + Q GI+ DEMGLGKT+Q ++FL L ++ P ++V P
Sbjct: 585 TLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 644
Query: 466 TLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXG 525
++L W E +++ P Q+ +K
Sbjct: 645 SVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINP---------------------- 682
Query: 526 NSRKWESLINRVTRSESG--LLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAEVT 583
R+ R ++G +LIT+Y+ L ++W Y VLDE I++ ++
Sbjct: 683 ---------KRMYRRDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRW 733
Query: 584 LVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYA-N 642
+R+++TG PIQN + ELW+L F+ P F F+ G+ +A +
Sbjct: 734 KTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSK--GIENHAEH 791
Query: 643 ATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFL 702
L R +L+ P++LRR+K DV ++L KTE + C L+ Q + Y+A
Sbjct: 792 GGTLNEHQLNRLHAILK----PFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQAIK 847
Query: 703 ASTEVEEILDGNRNSLSGIDV---------MRKICNHPDLLERDHALSNPDYG 746
+ E+ D NR + V +RK+CNHP+L ER+ S +G
Sbjct: 848 NKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 900
Score = 144 bits (364), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 751 SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMAL 810
SGK++ + +L + HRVLLF Q +ML+I E+++ + Y R+DG + + R +
Sbjct: 1205 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDM 1264
Query: 811 IDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 870
+ +F ++IFVF+L+T+ GGLG NLT A+ VI ++ DWNP+ D+QA +RA R+GQ +DV
Sbjct: 1265 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1324
Query: 871 TVYRLITRGTIEEKVYHRQIYKHFLTNKILK--NPQQKRFFKARDMKDLFI 919
TVYRLI + T+EEK+ HR K+ + ++ + Q F A D+ L +
Sbjct: 1325 TVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADVVSLLM 1375
>AT3G57300.2 | Symbols: INO80 | INO80 ortholog |
chr3:21199612-21207635 FORWARD LENGTH=1540
Length = 1540
Score = 149 bits (377), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 184/415 (44%), Gaps = 24/415 (5%)
Query: 347 RQWTNRVSREDMQLEDSENANGCLDTSDQENLGAQDDLADHESSYVTLEGGLKIPDNIFE 406
+Q T+ E M+L + G L+ ++ ++ H S + + ++ P+
Sbjct: 528 KQITDAFDTEYMKLRQTSEMEGPLNDI---SVSGSSNIDLHNPSTMPVTSTVQTPELFKG 584
Query: 407 ALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGAL-HFSGMFKPSIIVCPV 465
L +YQ G+QWL + Q GI+ DEMGLGKT+Q ++FL L ++ P ++V P
Sbjct: 585 TLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPA 644
Query: 466 TLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXG 525
++L W E +++ P Q+ +K
Sbjct: 645 SVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRVMFFSTWIISFDPWAVRQIC 704
Query: 526 NSRKWESLINRVTRSESG----LLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRNPNAE 581
++ +++ T S+ +LIT+Y+ L ++W Y VLDE I++ ++
Sbjct: 705 ICKRACNVVRFQTLSDMDAGFHILITSYQLLVTDEKYFRRVKWQYMVLDEAQAIKSSSSI 764
Query: 582 VTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYA 641
+R+++TG PIQN + ELW+L F+ P F F+ G+ +A
Sbjct: 765 RWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPMLFDNHDQFNEWFSK--GIENHA 822
Query: 642 -NATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRA 700
+ L R +L+ P++LRR+K DV ++L KTE + C L+ Q + Y+A
Sbjct: 823 EHGGTLNEHQLNRLHAILK----PFMLRRVKKDVVSELTTKTEVTVHCKLSSRQQAFYQA 878
Query: 701 FLASTEVEEILDGNRNSLSGIDV---------MRKICNHPDLLERDHALSNPDYG 746
+ E+ D NR + V +RK+CNHP+L ER+ S +G
Sbjct: 879 IKNKISLAELFDSNRGQFTDKKVLNLMNIVIQLRKVCNHPELFERNEGSSYLYFG 933
Score = 144 bits (363), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 109/171 (63%), Gaps = 2/171 (1%)
Query: 751 SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMAL 810
SGK++ + +L + HRVLLF Q +ML+I E+++ + Y R+DG + + R +
Sbjct: 1238 SGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDM 1297
Query: 811 IDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 870
+ +F ++IFVF+L+T+ GGLG NLT A+ VI ++ DWNP+ D+QA +RA R+GQ +DV
Sbjct: 1298 VRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDV 1357
Query: 871 TVYRLITRGTIEEKVYHRQIYKHFLTNKILK--NPQQKRFFKARDMKDLFI 919
TVYRLI + T+EEK+ HR K+ + ++ + Q F A D+ L +
Sbjct: 1358 TVYRLICKETVEEKILHRASQKNTVQQLVMTGGHVQGDDFLGAADVVSLLM 1408
>AT1G48310.1 | Symbols: CHR18, CHA18 | chromatin remodeling factor18
| chr1:17848620-17853731 REVERSE LENGTH=673
Length = 673
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 216/496 (43%), Gaps = 64/496 (12%)
Query: 399 KIPDNIFEALFDYQKVGVQWLWELHCQKAGG--IIGDEMGLGKTVQVLSFLGALHFSGMF 456
KIP +I L +Q+ G++++ + GG ++ DEMGLGKT+Q ++ + S
Sbjct: 163 KIPSHIEPKLLPFQREGIEFILQ-----HGGRVLLADEMGLGKTLQAIAVTTCVQESW-- 215
Query: 457 KPSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXX 516
P +I+ P +L W ++W LH D Q
Sbjct: 216 -PVLIIAPSSLRLHWATMIHQW--------LHVPPSDIVVVLPQPG-------------- 252
Query: 517 XXXXXXXXGNSRKWESLINRVTRSE---SGLL-ITTYEQLRILGDQLLDIEWGYAVLDEG 572
G+++ ++++ T+ G+ I +Y+ + L L+ +++ + DE
Sbjct: 253 --------GSNKCGFTIVSSNTKGTIHLDGVFNIVSYDVVTKLDKLLMALDFKVVIADES 304
Query: 573 HKIRNPNAEVTLVCKQL--QTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAE 630
H ++N A+ T C + + + I+++G P ++ EL+ + ++P + +
Sbjct: 305 HFLKNGQAKRTSACLPVIKKAQYAILLSGTPALSRPIELFKQLEALYPDVYRNIHEYGGR 364
Query: 631 FAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHVLFCSL 690
+ G Y A S +++ +M +RR+K DV +LP+K +F L
Sbjct: 365 YCKGGFFGTYQGA-----SNHDELHNLMKATVM---IRRLKKDVLTELPSKRRQQVFLDL 416
Query: 691 TPEQVSSYRAFLASTEVEEILDGNRNSLSGIDVMRKICNHPDLLERDHALSNPDYGNPER 750
+ + A E++ + ++ +S D+ +E++ L N Y +
Sbjct: 417 AAKDMKQINALFH--ELKVVKSKIKDCISEDDI-----KSLKFIEKN--LINKIYTD-SA 466
Query: 751 SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMAL 810
K+ V L E G + L+F Q ML+ FL R+DG TP R AL
Sbjct: 467 VAKIPAVLDYLENVIEAGCKFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQAL 526
Query: 811 IDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 870
+ +F +EI +L+ + G+G LT A+ VI + W P +QA +RA RIGQ V
Sbjct: 527 VSDFQDKDEIKAAVLSIRAAGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSV 586
Query: 871 TVYRLITRGTIEEKVY 886
++ L+ T+++ ++
Sbjct: 587 NIHYLLANDTVDDIIW 602
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 152/621 (24%), Positives = 246/621 (39%), Gaps = 88/621 (14%)
Query: 342 RPLPGRQWTNRVSREDMQLEDSENANGCLDTSDQENLGAQDDLADHESSYVTLEGGL--K 399
R + +W + +RE + + E G +S LG V+ EG + K
Sbjct: 759 RSMDVSEWGEKTTRERRKFDRFEEEEG---SSFIGKLGFDAPNNSLNEGCVSSEGTVWDK 815
Query: 400 IPDNIFEALFDYQKVGVQWLW---------------ELHCQKAGGIIGDEMGLGKTVQVL 444
IP + ++ +Q+ G +++W E + G I+ G GKT +
Sbjct: 816 IP-GVKSQMYPHQQEGFEFIWKNLAGTIMLNELKDFENSDETGGCIMSHAPGTGKTRLTI 874
Query: 445 SFLGA-LHFSGMFKPSIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXX 503
FL A L KP +I+ P +LL W E KW + + S+ D K+
Sbjct: 875 IFLQAYLQCFPDCKP-VIIAPASLLLTWAEEFKKW--NISIPFHNLSSLDFTGKENSAAL 931
Query: 504 XXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQ----- 558
+ K +S++ G+ YE+L + D+
Sbjct: 932 GLLMQKNATARSNNEIRMVKIYSWIKSKSIL--------GISYNLYEKLAGVKDEDKKTK 983
Query: 559 ----------LLDIEW------GYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPI 602
L DI G VLDE H RN + + +++T RI+++G P
Sbjct: 984 MVREVKPDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPF 1043
Query: 603 QNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRCAVVLRDLI 662
QN EL ++ P L L + + + G N L R L+ ++
Sbjct: 1044 QNNFLELCNVLGLARPKYLERLTSTLKKSGMTVTKRGKKN---LGNEINNRGIEELKAVM 1100
Query: 663 MPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGID 722
+P++ + + + LP E V+ L P ++ R L S EV NR + + +
Sbjct: 1101 LPFVHVHKGSILQSSLPGLRECVVV--LNPPELQ--RRVLESIEVTH----NRKTKNVFE 1152
Query: 723 VMRK---ICNHPDLLER-----------DHALS---NPDYGNPERSGKMKVVAQVLNVWK 765
K + HP L+ R D AL +P +S K + + + + + +
Sbjct: 1153 TEHKLSLVSVHPSLVSRCKISEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCE 1212
Query: 766 EQGHRVLLFCQTQQMLDIFENFLTT-----SGHVYRRMDGHTPVKYRMALIDEFN-ASNE 819
+VL+F Q L + L + G M G K R LI+EFN ++
Sbjct: 1213 VIKEKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSK 1272
Query: 820 IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRG 879
VF+ +TK G +L GA+RVI+ D WNP+ + QA RA+RIGQKR V Y L+ +G
Sbjct: 1273 AKVFLASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKG 1332
Query: 880 TIEEKVYHRQIYKHFLTNKIL 900
T E Y +Q K ++ +
Sbjct: 1333 TPEGPKYCKQAQKDRISELVF 1353
>AT5G07810.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / HNH endonuclease
domain-containing protein | chr5:2491412-2498484 REVERSE
LENGTH=1190
Length = 1190
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 116/533 (21%), Positives = 207/533 (38%), Gaps = 108/533 (20%)
Query: 400 IPDNIFEALFDYQKVGVQWLWELHCQKAGG--IIGDEMGLGKTVQVLSFLGALHFSGMFK 457
+P + AL +Q G+++ + GG I DEMGLGKT+Q ++ G G
Sbjct: 196 LPRKLVNALLPFQLDGLRFGL-----RRGGRCFIADEMGLGKTLQAIAIAGCFISEGSI- 249
Query: 458 PSIIVCPVTLLRQWKREANKWYPK-----FHVELLHDSAQDSAPKKKQXXXXXXXXXXXX 512
++VCP L W E +W P H+ H P+
Sbjct: 250 --LVVCPAVLRFTWAEELERWLPSCLPSDVHLVFGHQDNPAYLPR--------------- 292
Query: 513 XXXXXXXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEG 572
W ++ + +Y+ L+ L +L+ EW ++DE
Sbjct: 293 -----------------WPKVV-----------VISYKMLQHLRTTMLEREWALLIVDES 324
Query: 573 HKIR------NPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPV 626
H +R +P T++ + H I+++G P ++ +++ + ++PG LG
Sbjct: 325 HHLRCSKKKSDPPEIKTVLDVAEKVKHIILLSGTPSVSRPFDIFHQINMLWPGLLGKDKY 384
Query: 627 FEAEFAVPIG-VGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNKTEHV 685
A+ +G V G S R + L ++RR+K + QLP K +
Sbjct: 385 EFAKTYCEVGLVRGIQGKIFQDFSKGTRLLELNILLNQTVMIRRLKQHLLTQLPPKRRQI 444
Query: 686 LFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDVMRKICNHPDLLERD-----HA- 739
+ L ++ A + +E ++ DG I + + + PD R H
Sbjct: 445 VTILLKKSDIALAMAIV--SEAKKQKDG------AIAEVTEKSHEPDQNARGSNEAGHVN 496
Query: 740 LSNPDYGNPERSGKM--KVVAQVLNVWKEQGHR--------------------------- 770
N D N ++ ++ K+ Q L + K R
Sbjct: 497 AENSDGPNSDKENQLCGKLSYQQLGIAKLSAFREWLSLHPLLSGLDYTPEEIDGDRSSTK 556
Query: 771 VLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVG 830
+++F ++LD + F+ G + R+DG T + R + F S+E+ + I+ + G
Sbjct: 557 MVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVKIAIIGVEAG 616
Query: 831 GLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEE 883
G+G + + A V+ + PS +QA +RA R GQ V VY + T++E
Sbjct: 617 GVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDE 669
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 103 bits (258), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 127/550 (23%), Positives = 222/550 (40%), Gaps = 82/550 (14%)
Query: 404 IFEALFDYQKVGVQWLWE-------------LHCQKAGG-IIGDEMGLGKTVQVLSFLGA 449
I + L+ +Q+ G +++W+ + + +GG II + G GKT + FL +
Sbjct: 573 IKDTLYPHQQEGFEFIWKNLAGTTKINELNSVGVKGSGGCIISHKAGTGKTRLTVVFLQS 632
Query: 450 LHFSGMFKPSIIVCPVTLLRQWKREANKW---YPKFHVELLHDSAQDSAPKKKQXXXXXX 506
+++ P TL+R W+ E KW P +++ L S + A +
Sbjct: 633 YLKRFPNSHPMVIAPATLMRTWEDEVRKWNVNIPFYNMNSLQLSGYEDAEAVSRLEGNRH 692
Query: 507 XXXXXXXXXXXXXXXXXXGNSRKWESLINR-VTRSESGLLITTYEQL---------RILG 556
NS + L++ +S G+ YE+L ++
Sbjct: 693 H------------------NSIRMVKLVSWWKQKSILGISYPLYEKLAANKNTEGMQVFR 734
Query: 557 DQLLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFV 616
L+++ G VLDEGH RN ++ + V +++T RI ++G QN EL ++
Sbjct: 735 RMLVELP-GLLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQNNFKELSNVLCLA 793
Query: 617 FPGKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNA 676
P + E + G + +V+ R V L+ +I ++ +
Sbjct: 794 RPADKDTISSRIHELSKCSQEGEHG-----RVNEENR-IVDLKAMIAHFVHVHEGTILQE 847
Query: 677 QLPNKTEHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGIDVMRKICNHPDLL-- 734
LP + V+ L P ++ + +D ++N+ + + HP L
Sbjct: 848 SLPGLRDCVVV--LNPP--------FQQKKILDRIDTSQNTFEFEHKLSAVSVHPSLYLC 897
Query: 735 -----ERDHALSNPDYGNPER-------SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLD 782
+ D + G +R K K + + + +VL++ Q L
Sbjct: 898 CNPTKKEDLVIGPATLGTLKRLRLKYEEGVKTKFLIDFIRISGTVKEKVLVYSQYIDTLK 957
Query: 783 -IFENFLT----TSGHVYRRMDGHTPVKYRMALIDEFNASNE-IFVFILTTKVGGLGTNL 836
I E + T G M G + R +ID FN + V + +TK G +L
Sbjct: 958 LIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFNKPDSGSKVLLASTKACSEGISL 1017
Query: 837 TGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLT 896
GA+RV+I D WNPS + QA RA+RIGQKR V +Y L+ + T E Y +Q KH ++
Sbjct: 1018 VGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSEWNKYCKQSEKHRIS 1077
Query: 897 NKILKNPQQK 906
+ + +K
Sbjct: 1078 ELVFSSTNEK 1087
>AT1G11100.2 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1269
Length = 1269
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 757 VAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA 816
V V+NV G + ++F Q +MLD+ E L +SG YRR DG V R A + +FN
Sbjct: 1106 VGGVVNV---AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNT 1162
Query: 817 SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLI 876
++ V I++ K LG N+ A VI+ D WNP+T+ QA +RA RIGQ R V V R
Sbjct: 1163 LPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFT 1222
Query: 877 TRGTIEEKVYHRQIYKHFLTNKIL---KNPQQKRFFKARDMKDLFI 919
+ T+E+++ Q K + +N ++ D+ LF+
Sbjct: 1223 VKDTVEDRILALQQKKRKMVASAFGEHENGSRESHLSVEDLNYLFM 1268
>AT1G11100.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr1:3703934-3709302 REVERSE LENGTH=1226
Length = 1226
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 6/166 (3%)
Query: 757 VAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNA 816
V V+NV G + ++F Q +MLD+ E L +SG YRR DG V R A + +FN
Sbjct: 1063 VGGVVNV---AGEKAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNT 1119
Query: 817 SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLI 876
++ V I++ K LG N+ A VI+ D WNP+T+ QA +RA RIGQ R V V R
Sbjct: 1120 LPDVSVMIMSLKAASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFT 1179
Query: 877 TRGTIEEKVYHRQIYKHFLTNKIL---KNPQQKRFFKARDMKDLFI 919
+ T+E+++ Q K + +N ++ D+ LF+
Sbjct: 1180 VKDTVEDRILALQQKKRKMVASAFGEHENGSRESHLSVEDLNYLFM 1225
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 125/525 (23%), Positives = 214/525 (40%), Gaps = 96/525 (18%)
Query: 427 AGGIIGDEMGLGKTVQVLSFLGALHFSGMFKPSIIVCPVTLLRQWKREANKWYPKFHVEL 486
G I+ G GKT ++SFL + ++V P ++ WKRE W + + L
Sbjct: 286 GGCILAHAPGSGKTFLLISFLQSFMAMDPQARPLVVLPKGIIESWKREFTLWEVE-KIPL 344
Query: 487 LHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLI 546
L + + +K+Q +W E +L
Sbjct: 345 LDFYSVKAESRKQQLKVLG-----------------------QW--------IKERSILF 373
Query: 547 TTYEQL-RILGD----------QLLDIEW-GYAVLDEGHKIRNPNAEVTLVCKQLQTVHR 594
Y+Q RI+ D +L+ +E +LDEGH RN + +++T +
Sbjct: 374 LGYQQFTRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRK 433
Query: 595 IIMTGAPIQNKLTELWSLFDFVFP------GKLGVLPVFEAEFAVPIGV----------G 638
+++TG QN + E++++ D V P G ++ ++ +P G G
Sbjct: 434 VVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEG 493
Query: 639 GYANAT--PLQVSTAYRC-AVVLRDL--IMPYLLRRMKADVNAQLPNKTEHVLFCSLTP- 692
+ A LQ ST + A +++DL + +L KAD + LP +E + +L+
Sbjct: 494 TFFAAVELTLQRSTNFSAKASLIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNLSSI 553
Query: 693 --------------EQVSSYRAFLASTEVEEILDGN-RNSLSGIDVMRKICNHPDLLERD 737
+Q+S A +++ L+ N N G N+ +++ D
Sbjct: 554 QRDEVKGLRKMELFKQISLGAALYIHPKLKSFLEENPSNGEKGFSD-----NNTTVMKLD 608
Query: 738 HALSNPDYGNPERSG-KMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTS----- 791
L + R G KMK +L + + G ++L+F Q + E +++
Sbjct: 609 KMLKKINV----RDGVKMKFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRL 664
Query: 792 GHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNP 851
G + G + + R ++ FN S E VF + K G G +L GA+RV+I D NP
Sbjct: 665 GKEMFTITGDSSNEQREWSMERFNNSLEAKVFFGSIKACGEGISLVGASRVLILDVHLNP 724
Query: 852 STDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLT 896
S QA RA+R GQKR V Y+L+ + EE+ Y K ++
Sbjct: 725 SVTQQAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMS 769
>AT1G61140.1 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22540610 REVERSE
LENGTH=1280
Length = 1280
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%)
Query: 702 LASTEVEEILDGNRNSLSGIDVMRKICNHPDLLERDHALSNPDYG----NPERSGKMKVV 757
L+ E++ G+ + +++++ + DL + + N +Y P ++ M V
Sbjct: 1057 LSPCSDEDLPYGSSKIKAALEILQSLPKAHDLTDSNQISENREYSGLSITPVKNEGMSVD 1116
Query: 758 AQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNAS 817
+ K G + ++F Q +ML++ E L +S YRR+DG V R + +FN
Sbjct: 1117 VPI----KVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL 1172
Query: 818 NEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLIT 877
E+ V I++ K LG N+ A V++ D WNP+T+ QA +RA RIGQ R VTV R
Sbjct: 1173 PEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTV 1232
Query: 878 RGTIEEKVYHRQIYKHFLT 896
+ T+E+++ Q K +
Sbjct: 1233 KDTVEDRILALQQKKRMMV 1251
>AT1G61140.3 | Symbols: EDA16 | SNF2 domain-containing protein /
helicase domain-containing protein / zinc finger
protein-related | chr1:22535038-22539756 REVERSE
LENGTH=1122
Length = 1122
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 8/199 (4%)
Query: 702 LASTEVEEILDGNRNSLSGIDVMRKICNHPDLLERDHALSNPDYG----NPERSGKMKVV 757
L+ E++ G+ + +++++ + DL + + N +Y P ++ M V
Sbjct: 899 LSPCSDEDLPYGSSKIKAALEILQSLPKAHDLTDSNQISENREYSGLSITPVKNEGMSVD 958
Query: 758 AQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNAS 817
+ K G + ++F Q +ML++ E L +S YRR+DG V R + +FN
Sbjct: 959 VPI----KVAGEKAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTL 1014
Query: 818 NEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLIT 877
E+ V I++ K LG N+ A V++ D WNP+T+ QA +RA RIGQ R VTV R
Sbjct: 1015 PEVTVMIMSLKAASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTV 1074
Query: 878 RGTIEEKVYHRQIYKHFLT 896
+ T+E+++ Q K +
Sbjct: 1075 KDTVEDRILALQQKKRMMV 1093
>AT5G05130.1 | Symbols: | DNA/RNA helicase protein |
chr5:1512173-1514918 FORWARD LENGTH=862
Length = 862
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 772 LLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEI--FVFILTTKV 829
++F Q ++ML + E L +G R+DG VK R +I EF V + + K
Sbjct: 710 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKA 769
Query: 830 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQ 889
G G NLT A+RV +FDP WNP+ + QA +R RIGQK++V + R+I R +IEE+V Q
Sbjct: 770 SGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQ 829
Query: 890 IYKHFLTNKILKNPQQK 906
K L N+ K Q+K
Sbjct: 830 QKKKNLANEAFKRRQKK 846
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 12/137 (8%)
Query: 562 IEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKL 621
+EW +LDE H I+N NA+ + V +L+ R +TG PIQN +L+SL F+
Sbjct: 410 MEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPF 469
Query: 622 GVLPVFEAEFAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPNK 681
+ +++ P+G G + LQV L+ LRR K LP K
Sbjct: 470 SIKSYWQSLIQRPLGQGNKKGLSRLQV------------LMATISLRRTKEKSLIGLPPK 517
Query: 682 TEHVLFCSLTPEQVSSY 698
T + L+PE+ Y
Sbjct: 518 TVETCYVELSPEERQLY 534
>AT5G22750.1 | Symbols: RAD5 | DNA/RNA helicase protein |
chr5:7565374-7570871 REVERSE LENGTH=1029
Length = 1029
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 1/168 (0%)
Query: 751 SGKMKVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMAL 810
S K+ + + L + G + +LF Q LD+ + L+ + + R+DG + R +
Sbjct: 862 SSKITALLEELEGLRSSGSKSILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKV 921
Query: 811 IDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDV 870
+ EF+ I V +++ K GG+G NLT A+ + DP WNP+ + QA R RIGQ ++V
Sbjct: 922 LKEFSEDGSILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEV 981
Query: 871 TVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQKRFFKARDMKDLF 918
+ R I +GT+EE++ Q K + + L + Q+ R + ++K LF
Sbjct: 982 KIRRFIVKGTVEERMEAVQARKQRMISGALTD-QEVRSARIEELKMLF 1028
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 114/532 (21%), Positives = 181/532 (34%), Gaps = 185/532 (34%)
Query: 328 REAEPNKDSKRKRKRPLPGRQWTNRVSREDMQLEDSEN----ANG-----CLDTSDQENL 378
++AE + +KRPL + + + +QL +N ANG C+ D +N+
Sbjct: 268 KKAEFTPEDFYSKKRPLSSKD-GSAIPTSLLQLNKVKNMNQDANGDENEQCISDGDLDNI 326
Query: 379 -GAQDDLADHESSYVTLEGGLKIPDNIFEALFDYQKVGVQWL------------------ 419
G D E ++ P + L YQK + W+
Sbjct: 327 VGVGDSSGLKE---------METPHTLLCELRPYQKQALHWMTQLEKGNCTDEAATMLHP 377
Query: 420 -WELHC--------------------------QKA-GGIIGDEMGLGKTVQVLSFLGALH 451
WE +C Q A GGI+ D MGLGKTV +S L A
Sbjct: 378 CWEAYCLADKRELVVYLNSFTGDATIHFPSTLQMARGGILADAMGLGKTVMTISLLLAHS 437
Query: 452 F----SGMFKPS-------------------------------------------IIVCP 464
+ +G P+ +IVCP
Sbjct: 438 WKAASTGFLCPNYEGDKVISSSVDDLTSPPVKATKFLGFDKRLLEQKSVLQNGGNLIVCP 497
Query: 465 VTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXX 524
+TLL QWK E + + Q S PK +
Sbjct: 498 MTLLGQWKTEIEMHAKPGSLSVYVHYGQ-SRPKDAKLL---------------------- 534
Query: 525 GNSRKWESLINRVTRSESGLLITTYEQLRILGDQ--------LLDIEWGYAVLDEGHKIR 576
S+S ++ITTY L Q + + W VLDE H I+
Sbjct: 535 ---------------SQSDVVITTYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIK 579
Query: 577 NPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIG 636
N ++++L L R +TG PIQN L +L+SL F+ G + P
Sbjct: 580 NSKSQISLAAAALVADRRWCLTGTPIQNNLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFE 639
Query: 637 VGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQ------LPNKTEHVLFCSL 690
G R +++ ++ P +LRR K+ + + LP V++C L
Sbjct: 640 EGD------------ERGLKLVQSILKPIMLRRTKSSTDREGRPILVLPPADARVIYCEL 687
Query: 691 TPEQVSSYRAFLASTEVE--------EILDGNRNSLSGIDVMRKICNHPDLL 734
+ + Y A ++V+ ++L + L + +R+ C+HP L+
Sbjct: 688 SESERDFYDALFKRSKVKFDQFVEQGKVLHNYASILELLLRLRQCCDHPFLV 739
>AT5G43530.1 | Symbols: | Helicase protein with RING/U-box domain |
chr5:17489327-17494830 FORWARD LENGTH=1277
Length = 1277
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 768 GHRVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTT 827
G + ++F Q LD+ E L G + R DG K R ++ EFN + + + +++
Sbjct: 1127 GEKSIVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSL 1186
Query: 828 KVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYH 887
K GG+G NLT A+ V + DP WNP+ + QA R RIGQKR V V R I + T+EE++
Sbjct: 1187 KAGGVGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQ 1246
Query: 888 RQIYKHFLTNKILKNPQQKRFFKARDMKDLF 918
Q K + L + ++ R + ++K LF
Sbjct: 1247 VQARKQRMIAGALTD-EEVRSARLEELKMLF 1276
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 129/351 (36%), Gaps = 88/351 (25%)
Query: 428 GGIIGDEMGLGKTVQVLSFLGA--------------------------LHFSGMFKP--- 458
GGI+ D MGLGKTV ++ + A +H +
Sbjct: 682 GGILADAMGLGKTVMTIALILARPGRGNPENEDVLVADVNADKRNRKEIHMALTTVKAKG 741
Query: 459 -SIIVCPVTLLRQWKREANKWYPKFHVELLHDSAQDSAPKKKQXXXXXXXXXXXXXXXXX 517
++I+CP+ LL QWK E V +L D K
Sbjct: 742 GTLIICPMALLSQWKDELETHSKPDTVSVLVYYGGDRTHDAKAIAS-------------- 787
Query: 518 XXXXXXXGNSRKWESLINRVTRSESGLLITTYEQLRILGDQLLDIEWGYAVLDEGHKIRN 577
+ V + G+L + Y+Q + I+W VLDE H I++
Sbjct: 788 -----------------HDVVLTTYGVLTSAYKQ-DMANSIFHRIDWYRIVLDEAHTIKS 829
Query: 578 PNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFAVPIGV 637
+ +L + R +TG P+QNKL +L+SL F L V P + +
Sbjct: 830 WKTQAAKATFELSSHCRWCLTGTPLQNKLEDLYSLLCF-----LHVEPWCNWAWWSKLIQ 884
Query: 638 GGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMK------ADVNAQLPNKTEHVLFCSLT 691
Y N P R +++ ++ P +LRR K + +LP V+ C +
Sbjct: 885 KPYENGDP-------RGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDVQVIECEQS 937
Query: 692 PEQVSSYRAFLASTEVE--------EILDGNRNSLSGIDVMRKICNHPDLL 734
+ Y A ++V+ ++L N L + +R+ CNHP L+
Sbjct: 938 EAERDFYTALFKRSKVQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLV 988
>AT3G20010.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related |
chr3:6971352-6976340 FORWARD LENGTH=1047
Length = 1047
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 71/120 (59%)
Query: 770 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKV 829
+ ++F Q MLD+ E + SG +RR+DG + R + EF+ ++ V +++ K
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKA 953
Query: 830 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQ 889
G LG N+ A VI+ D WNP+T+ QA +RA RIGQ R VTV R+ + T+E+++ Q
Sbjct: 954 GNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQ 1013
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 25/188 (13%)
Query: 562 IEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKL 621
+ W VLDE I+N ++ C L+ R ++G PIQN + +L+S F F+
Sbjct: 540 VGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFRFLRYDPY 599
Query: 622 GVLPVFEAEFAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADV-----NA 676
V F + VPI LQ VLR + +LRR K +
Sbjct: 600 AVYKSFYSTIKVPISRNSCQGYKKLQ--------AVLRAI----MLRRTKGTLLDGKPII 647
Query: 677 QLPNKTEHVLFCSLTPEQVSSYRA--------FLASTEVEEILDGNRNSLSGIDVMRKIC 728
LP K ++ + + S Y+ F A + + N L + +R+ C
Sbjct: 648 NLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAGTLSQNYANILLLLLRLRQAC 707
Query: 729 NHPDLLER 736
+HP L++R
Sbjct: 708 DHPQLVKR 715
>AT1G50410.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr1:18672828-18677365 FORWARD LENGTH=981
Length = 981
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 70/120 (58%)
Query: 770 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKV 829
+ ++F Q MLD+ E L + +RR+DG + R + EF+ ++ V I++ K
Sbjct: 828 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 887
Query: 830 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQ 889
G LG N+ A VI+ D WNP+T+ QA +RA RIGQ R VTV R+ + T+E+++ Q
Sbjct: 888 GNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQ 947
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 31/194 (15%)
Query: 559 LLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFP 618
L + W VLDE I+N +V C L+ R ++G PIQN + +L+S F F+
Sbjct: 466 LAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKY 525
Query: 619 GKLGVLPVFEAEFAVPIGVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKAD-VNAQ 677
V F + PI LQ VLR + +LRR K ++ Q
Sbjct: 526 DPYAVYKSFCHQIKGPISRNSLQGYKKLQ--------AVLRAI----MLRRTKGTLLDGQ 573
Query: 678 ----LPNKT-----------EHVLFCSLTPEQVSSYRAFLASTEVEEILDGNRNSLSGID 722
LP KT E + L + S ++A+ A+ + + N L +
Sbjct: 574 PIINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYAAAGTLNQ---NYANILLMLL 630
Query: 723 VMRKICNHPDLLER 736
+R+ C+HP L++R
Sbjct: 631 RLRQACDHPQLVKR 644
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/519 (22%), Positives = 204/519 (39%), Gaps = 90/519 (17%)
Query: 427 AGGIIGDEMGLGKTVQVLSFLGALHFSGMFKPSIIVCPVTLLRQWKREANKWYPKFHVEL 486
G I+ G GKT ++SF+ + ++V P +L WK+E +W + + L
Sbjct: 371 GGCIMAHAPGSGKTFMIISFMQSFLAKYPQAKPLVVLPKGILPTWKKEFVRWQVE-DIPL 429
Query: 487 LHDSAQDSAPKKKQXXXXXXXXXXXXXXXXXXXXXXXXGNSRKWESLINRVTRSESGLLI 546
L + + + +Q ++W + +L
Sbjct: 430 LDFYSAKAENRAQQLSIL-----------------------KQW--------MEKKSILF 458
Query: 547 TTYEQLR-ILGDQ----------LLDIEWGYAVLDEGHKIRNPNAEVTLVCKQLQTVHRI 595
Y+Q I+ D LL + +LDEGH RN + + Q+QT ++
Sbjct: 459 LGYQQFSTIVCDDTTDSLSCQEILLKVP-SILILDEGHTPRNEDTNLLQSLAQVQTPRKV 517
Query: 596 IMTGAPIQNKLTELWSLFDFVFPGKLGV----LPVFEAEFAVPIGVGGYANATPLQVSTA 651
+++G QN + E++++ + V P L + V P V G + +++
Sbjct: 518 VLSGTLYQNHVKEVFNILNLVRPKFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASM 577
Query: 652 YRCAV---------------VLRDL--IMPYLLRRMKADVNAQLPNKTEHVLFCSLTPEQ 694
+ V V++DL + +L K D +LP + + +L+P+Q
Sbjct: 578 FNETVEHTLQKSEDFTVKIKVIQDLREMTKKVLHYYKGDFLDELPGLADFTVVLNLSPKQ 637
Query: 695 VSSYRAFLASTEVEEILDGNRNSLSGIDVMRKICNHPDL-LERDHALSNPDYGNPERSGK 753
++ + L + V I HP L + D + D E K
Sbjct: 638 LNEVKK----------LRREKRKFKVSAVGSAIYLHPKLKVFSDKSDDVSDTTMDEMVEK 687
Query: 754 M--------KVVAQVLNVWKEQGHRVLLFCQTQQMLDIFENFLTTS-----GHVYRRMDG 800
+ K ++N+ G ++L+F Q L E + G + G
Sbjct: 688 LDLNEGVKAKFFLNLINLCDSAGEKLLVFSQYLIPLKFLERLAALAKGWKLGKEVFVLTG 747
Query: 801 HTPVKYRMALIDEFNASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARER 860
+T + R ++ FN+S + +F + K G G +L GA+R++I D NPS QA R
Sbjct: 748 NTSSEQREWSMETFNSSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQAIGR 807
Query: 861 AWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKI 899
A+R GQK+ V YRLI + EE+ H +K + +K+
Sbjct: 808 AFRPGQKKMVHAYRLIAGSSPEEE-DHNTCFKKEVISKM 845
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 8/156 (5%)
Query: 751 SGKMKVVAQVLNVWKEQGHRVLLFCQ----TQQMLDIFEN-FLTTSGHVYRRMDGHTPVK 805
S M V+ V V K + ++L+FC + L++FEN F G + G +
Sbjct: 1057 SKVMFVLNLVFRVVKRE--KILIFCHNIAPIRLFLELFENVFRWKRGRELLTLTGDLELF 1114
Query: 806 YRMALIDEFN-ASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRI 864
R +ID+F + V + + G +LT A+RVI+ D +WNPS QA RA+R
Sbjct: 1115 ERGRVIDKFEEPGGQSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRP 1174
Query: 865 GQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 900
GQ++ V VY+L++RGT+EE Y R +K ++++ I
Sbjct: 1175 GQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSSMIF 1210
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 8/156 (5%)
Query: 751 SGKMKVVAQVLNVWKEQGHRVLLFCQ----TQQMLDIFEN-FLTTSGHVYRRMDGHTPVK 805
S M V+ + V K + ++L+FC + ++FEN F G + G +
Sbjct: 1063 SKVMFVLNLIFRVVKRE--KILIFCHNIAPIRMFTELFENIFRWQRGREILTLTGDLELF 1120
Query: 806 YRMALIDEFN-ASNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRI 864
R +ID+F N V + + G +LT A+RVI+ D +WNPS QA RA+R
Sbjct: 1121 ERGRVIDKFEEPGNPSRVLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRP 1180
Query: 865 GQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKIL 900
GQ++ V VY+L++RGT+EE Y R +K +++ I
Sbjct: 1181 GQQKVVYVYQLLSRGTLEEDKYRRTTWKEWVSCMIF 1216
>AT1G05120.1 | Symbols: | Helicase protein with RING/U-box domain |
chr1:1471624-1476067 REVERSE LENGTH=833
Length = 833
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
Query: 770 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKV 829
+ ++F Q LD+ L G ++ G + R I++F + VF+++ K
Sbjct: 682 KAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKA 741
Query: 830 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQ 889
GG+ NLT A+ V + DP WNP+ + QA++R RIGQ + + V R I T+EE++ Q
Sbjct: 742 GGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQ 801
Query: 890 IYKHFLTNKILKNPQQK-RFFKARDMKDLF 918
K + + Q+ DM+ LF
Sbjct: 802 KKKELVFEGTVGGSQEAIGKLTEEDMRFLF 831
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 401 PDNIFEALFDYQKVGVQWLWELHCQKAGGIIGDEMGLGKTVQVLSFLGA------LHFSG 454
P ++ L YQK + W + AGGI+ DEMG+GKT+Q +S + A F
Sbjct: 132 PSDLIMPLLRYQKEFLAWATKQEQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGE 191
Query: 455 MFKPSIIVCPVTLLRQWKREANKW 478
++++CP+ + QW E ++
Sbjct: 192 AAGCTLVLCPLVAVSQWLNEIARF 215
>AT1G02670.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:576046-580299
FORWARD LENGTH=678
Length = 678
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Query: 770 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKV 829
+ ++F Q LD+ L SG ++ G + A + F + V +++ +
Sbjct: 527 KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQA 586
Query: 830 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQ 889
GG+ NLT A+ V + DP WNP+ + QA++R RIGQ + V V R I T+EEK+ Q
Sbjct: 587 GGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQ 646
Query: 890 IYKHFLTNKILKNPQQKRFFKA--RDMKDLF 918
K L L + ++ K D+K LF
Sbjct: 647 KKKEDLFESTLGDSEEAVVQKLGEDDIKSLF 677
>AT3G16600.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
| chr3:5652839-5655670 REVERSE LENGTH=638
Length = 638
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 817 SNEIFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLI 876
S + +++ K G LG N+ A+ VI+ D WNP+T+ QA +RA RIGQ R VTV R+
Sbjct: 504 SGLVCAMLMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIA 563
Query: 877 TRGTIEEKV 885
+ T+EE++
Sbjct: 564 IKNTVEERI 572
>AT2G40770.1 | Symbols: | zinc ion binding;DNA binding;helicases;ATP
binding;nucleic acid binding | chr2:17013535-17021315
REVERSE LENGTH=1664
Length = 1664
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 22/167 (13%)
Query: 770 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNE---------- 819
+VL+F +LD+ E+ + RM G + I +F S +
Sbjct: 1451 KVLVFSSWNDVLDVLEHAFAANSITCIRMKGG---RKSQTAISKFKGSEKETQKTNSHQK 1507
Query: 820 ----IFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRL 875
I V +L + G G NL A VI+ +P NP+ + QA R RIGQ++ V+R
Sbjct: 1508 EEKSIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRF 1567
Query: 876 ITRGTIEEKVYHRQIYKHF----LTNKILKNPQQKRFFKARDMKDLF 918
+ GT+EE +Y K+ +++ KN Q ++F +D++ LF
Sbjct: 1568 LVSGTVEESIYKLNRNKNTNLSSFSSRNTKN-QDQQFLTLKDLESLF 1613
>AT3G54460.1 | Symbols: | SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein |
chr3:20162050-20167186 REVERSE LENGTH=1378
Length = 1378
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 770 RVLLFCQTQQMLDIFENFLTTSGHVYRRMDGHTPVKYRMALIDEFNASNEIFVFILTTKV 829
+VL+F Q + + + E LTT+G + +M +M + F + ++
Sbjct: 1195 KVLIFSQFLEHIHVIEQQLTTAGIKFGKMYSPMQSYNKMKALAMFQNDADCMALLMDGS- 1253
Query: 830 GGLGTNLTGANRVIIFDPDWNPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKV 885
G LG +L+ V + +P W+ S + Q RA R+G KR + V L RGTIEE++
Sbjct: 1254 GALGLDLSFVTHVFLMEPIWDKSLEEQVISRAHRMGAKRPIFVETLTMRGTIEEQM 1309