Miyakogusa Predicted Gene
- Lj0g3v0013929.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0013929.1 tr|Q6EUF1|Q6EUF1_ORYSJ Os02g0233200 protein
OS=Oryza sativa subsp. japonica GN=OJ1705_E12.36 PE=4
SV,48.94,5e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,1599_g.1
(147 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G78700.1 | Symbols: BEH4 | BES1/BZR1 homolog 4 | chr1:2959985... 165 8e-42
AT4G18890.1 | Symbols: BEH3 | BES1/BZR1 homolog 3 | chr4:1035277... 137 3e-33
AT1G75080.2 | Symbols: BZR1 | Brassinosteroid signalling positiv... 49 1e-06
AT1G75080.1 | Symbols: BZR1 | Brassinosteroid signalling positiv... 49 1e-06
>AT1G78700.1 | Symbols: BEH4 | BES1/BZR1 homolog 4 |
chr1:29599854-29601539 FORWARD LENGTH=325
Length = 325
Score = 165 bits (418), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/153 (59%), Positives = 108/153 (70%), Gaps = 15/153 (9%)
Query: 1 MQADWEDQSTRPGWGGQQYPFLPSSTPPSPGRQVV-DPDWFAGIRMPHGGPNSPTFSLVS 59
M DW+ + F SSTPPSP RQ++ D +WF+GI++ P SPTFSLVS
Sbjct: 182 MNTDWQQLNNS---------FFVSSTPPSPTRQIIPDSEWFSGIQLAQSVPASPTFSLVS 232
Query: 60 SNPFGFKDEVFVGSGS----RMWTPGQSGTCSAAIAAGSDHTADIPMAEAVSD-EFAFGS 114
NPFGFK+E +G RMWTPGQSGTCS AI G+D TAD+PM+EAV+ EFAFGS
Sbjct: 233 QNPFGFKEEAASAAGGGGGSRMWTPGQSGTCSPAIPPGADQTADVPMSEAVAPPEFAFGS 292
Query: 115 STAGLVKPWEGERIHEDCGSDDLELTLGSSKTR 147
+T GLVK WEGERIHE+ GSDDLELTLG+S TR
Sbjct: 293 NTNGLVKAWEGERIHEESGSDDLELTLGNSSTR 325
>AT4G18890.1 | Symbols: BEH3 | BES1/BZR1 homolog 3 |
chr4:10352774-10355259 FORWARD LENGTH=284
Length = 284
Score = 137 bits (344), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 77/132 (58%), Positives = 93/132 (70%), Gaps = 10/132 (7%)
Query: 26 TPP---SPGR-QVVDPD--WFAGIRMPHGGPNSPTFSLVSSNPFGFKDEVFVG-SGSRMW 78
TPP SP R QV PD W +G++ P GP+SPTFSLVS NPF K+ +G S MW
Sbjct: 153 TPPLARSPTRDQVTIPDSGWLSGMQTPQSGPSSPTFSLVSRNPFFDKEAFKMGDCNSPMW 212
Query: 79 TPGQSGTCSAAIAAGSDHTADIPMAEAVSDEFAFGSSTA---GLVKPWEGERIHEDCGSD 135
TPGQSG CS AI AG D +D+PMA+ ++ EFAFG + G+VKPWEGERIH +C SD
Sbjct: 213 TPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNAMAANGMVKPWEGERIHGECVSD 272
Query: 136 DLELTLGSSKTR 147
DLELTLG+S+TR
Sbjct: 273 DLELTLGNSRTR 284
>AT1G75080.2 | Symbols: BZR1 | Brassinosteroid signalling positive
regulator (BZR1) family protein | chr1:28185709-28187063
FORWARD LENGTH=336
Length = 336
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 107 SDEFAFGSSTAGLVKPWEGERIHEDCGSDDLELTLGSSKTR 147
S EF F +S VKPWEGERIH D G +DLELTLG+ K R
Sbjct: 299 SSEFKFENSQ---VKPWEGERIH-DVGMEDLELTLGNGKAR 335
>AT1G75080.1 | Symbols: BZR1 | Brassinosteroid signalling positive
regulator (BZR1) family protein | chr1:28185709-28187063
FORWARD LENGTH=336
Length = 336
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 29/41 (70%), Gaps = 4/41 (9%)
Query: 107 SDEFAFGSSTAGLVKPWEGERIHEDCGSDDLELTLGSSKTR 147
S EF F +S VKPWEGERIH D G +DLELTLG+ K R
Sbjct: 299 SSEFKFENSQ---VKPWEGERIH-DVGMEDLELTLGNGKAR 335