Miyakogusa Predicted Gene
- Lj0g3v0011599.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0011599.1 tr|Q45FY8|Q45FY8_SOYBN Coronatine-insensitive 1
OS=Glycine max GN=COI1 PE=2 SV=1,85.06,0,no description,NULL;
RNI-like,NULL; Leucine-rich repeat - CC
(cysteine-containin,Leucine-rich
repeat,NODE_23691_length_2064_cov_198.769379.path1.1
(590 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr... 757 0.0
AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein... 288 7e-78
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ... 286 2e-77
AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 | chr1:436... 281 6e-76
AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 | chr5:20334... 272 5e-73
AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 | chr3:986... 271 8e-73
AT4G24390.1 | Symbols: | RNI-like superfamily protein | chr4:12... 260 2e-69
AT4G24390.2 | Symbols: | RNI-like superfamily protein | chr4:12... 260 2e-69
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 74 3e-13
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 54 3e-07
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 50 5e-06
>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
chr2:16672848-16675486 REVERSE LENGTH=592
Length = 592
Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/586 (64%), Positives = 452/586 (77%), Gaps = 16/586 (2%)
Query: 8 EDRSARRNRL-----VDEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCY 62
ED +R +L VD+V++ V+ YI DPKDRD+ S VC+ W+++DS TR+HVT+ALCY
Sbjct: 2 EDPDIKRCKLSCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKIDSETREHVTMALCY 61
Query: 63 TTTPARLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRR 122
T TP RL RRFP+L SLKLKGKPRAAMFNLIPE+WGG+VTPWV EI+ LKS+HFRR
Sbjct: 62 TATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRR 121
Query: 123 MIVKDNDLLLLAQSRGPVLHSLKLDKCCGFSTDGLLHVSRFCRNLRVLLLEESSIDEKDG 182
MIV D DL LA++R L +LKLDKC GF+TDGLL + CR ++ LL+EESS EKDG
Sbjct: 122 MIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDG 181
Query: 183 EWLHELALSNTVLESLNFYLTDVAAVKIEDLELLAKNCPNLVSVKITEYEISNLVNFFRQ 242
+WLHELA NT LE LNFY+T+ A + +DLE +A+NC +LVSVK+ ++EI LV FF+
Sbjct: 182 KWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKA 241
Query: 243 ASSLEEFCGGIYNEE---PEIYSAVSLPAKLCRLGLTYIGKNELPMMLMFXXXXXXXXXX 299
A++LEEFCGG NE+ PE Y + P KLCRLGL+Y+G NE+P++ F
Sbjct: 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLL 301
Query: 300 XXXXXXXXHCMLIQKCPNLEVLETRNVIGDRGLEVLGSCCKRLKRLRIERG------DDE 353
HC LIQKCPNLEVLETRNVIGDRGLEVL CK+LKRLRIERG +DE
Sbjct: 302 YALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDE 361
Query: 354 GETVSHRGLIALSEGCSELEYLAVYVSDITNASLEHMGTHLRNLCDFRLVLLDQEEKITD 413
VS RGLIAL++GC ELEY+AVYVSDITN SLE +GT+L+NLCDFRLVLLD+EE+ITD
Sbjct: 362 EGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421
Query: 414 LPLDRGVQALLRGCDKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVGETDEGLL 473
LPLD GV++LL GC KL+RFA YLR+GGLTD+GLSYIGQYS NVRWMLLG VGE+DEGL+
Sbjct: 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481
Query: 474 EFAKGCPNLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPTGRDLLAMARPFW 533
EF++GCPNLQKLEMRGC FSE A+A A T+L SLRYLWVQGY AS TG+DL+ MARP+W
Sbjct: 482 EFSRGCPNLQKLEMRGCC-FSERAIAAAVTKLPSLRYLWVQGYRASMTGQDLMQMARPYW 540
Query: 534 NIELIPSRRVVVNNNMDGPVVSVHHPAHILAYYSLAGQRSDFPDTV 579
NIELIPSRR V N G + + HPAHILAYYSLAGQR+D P TV
Sbjct: 541 NIELIPSRR-VPEVNQQGEIREMEHPAHILAYYSLAGQRTDCPTTV 585
>AT3G62980.1 | Symbols: TIR1 | F-box/RNI-like superfamily protein |
chr3:23273479-23276181 REVERSE LENGTH=594
Length = 594
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 291/579 (50%), Gaps = 26/579 (4%)
Query: 19 DEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCYTTTPARLRRRFPHLES 78
+EVL+ V +I KDR++VS VCK WYE++ R+ V I CY +PA + RRFP + S
Sbjct: 11 EEVLEHVFSFIQLDKDRNSVSLVCKSWYEIERWCRRKVFIGNCYAVSPATVIRRFPKVRS 70
Query: 79 LKLKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRRMIVKDNDLLLLAQSRG 138
++LKGKP A FNL+P+ WGG+V PW+ ++ + L+ + +RM+V D+ L L+A+S
Sbjct: 71 VELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFK 130
Query: 139 PVLHSLKLDKCCGFSTDGLLHVSRFCRNLRVLLLEESSIDEKDGEWLHELALSNTVLESL 198
L L C GFSTDGL ++ CRNL+ L L ES +D+ G WL + T L SL
Sbjct: 131 N-FKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSL 189
Query: 199 NFYLTDVAAVKIEDLELLAKNCPNLVSVKITE-YEISNLVNFFRQASSLEEFCGGIYNEE 257
N + V LE L CPNL S+K+ + L ++A LEE G Y E
Sbjct: 190 NISCL-ASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAE 248
Query: 258 --PEIYSAVSLPAKLCR-----LGLTYIGKNELPMMLMFXXXXXXXXXXXXXXXXXXHCM 310
P++YS +S+ C+ G LP +
Sbjct: 249 VRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVK 308
Query: 311 LIQKCPNLEVLETRNVIGDRGLEVLGSCCKRLKRLRIERGD----DEGETVSHRGLIALS 366
L+ +CP L+ L + I D GLEVL S CK L+ LR+ + + ++ +GL+++S
Sbjct: 309 LLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVS 368
Query: 367 EGCSELEYLAVYVSDITNASLEHMGTHLRNLCDFRLVLLDQE--EKITDLPLDRGVQALL 424
GC +LE + + +TNA+L + + N+ FRL +++ + + +T PLD G A++
Sbjct: 369 MGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIV 428
Query: 425 RGCDKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVGETDEGLLEFAKGCPNLQK 484
C K G LTD YIG Y++ + + + G++D G+ GC +L+K
Sbjct: 429 EHC---KDLRRLSLSGLLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRK 485
Query: 485 LEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPTGRDLLAMARPFWNIELIPSRRVV 544
LE+R C F + AL A++L ++R LW+ S LL P N+E+I R
Sbjct: 486 LEIRDCP-FGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGAP 544
Query: 545 VNNNMDGPVVSVHHPAHILAYYSLAGQRSDFPDTVVPLD 583
+ PV + Y ++AG R D P V +D
Sbjct: 545 DSRPESCPV------ERVFIYRTVAGPRFDMPGFVWNMD 577
>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
chr4:1405108-1407057 REVERSE LENGTH=585
Length = 585
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/578 (33%), Positives = 296/578 (51%), Gaps = 27/578 (4%)
Query: 16 RLVDEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCYTTTPARLRRRFPH 75
R +VL+ ++ +ID +DR++VS VCK W+E + TRK V + CY +PA + RRFP
Sbjct: 4 RFPPKVLEHILSFIDSNEDRNSVSLVCKSWFETERKTRKRVFVGNCYAVSPAAVTRRFPE 63
Query: 76 LESLKLKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRRMIVKDNDLLLLAQ 135
+ SL LKGKP A +NL+P+ WGG+ PW+ + L+ + +RM+V D L +A
Sbjct: 64 MRSLTLKGKPHFADYNLVPDGWGGYAWPWIEAMAAKSSSLEEIRMKRMVVTDECLEKIAA 123
Query: 136 SRGPVLHSLKLDKCCGFSTDGLLHVSRFCRNLRVLLLEESSIDEKDGEWLHELALSNTVL 195
S L L C GFSTDG+ ++ CRNLRVL L E +++ G+WL S+T L
Sbjct: 124 SFKD-FKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVEDLGGDWLSYFPESSTSL 182
Query: 196 ESLNFYLTDVAAVKIEDLELLAKNCPNLVSVKIT-EYEISNLVNFFRQASSLEEFCGGIY 254
SL+F D + VKI DLE L PNL S+K+ + LV+ R A L E G +
Sbjct: 183 VSLDFSCLD-SEVKISDLERLVSRSPNLKSLKLNPAVTLDGLVSLLRCAPQLTELGTGSF 241
Query: 255 NEE--PEIYSAVSLPAKLCRL-----GLTYIGKNELPMMLMFXXXXXXXXXXXXXXXXXX 307
+ PE +S +S C+ GL + LP +
Sbjct: 242 AAQLKPEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCPGLTSLNLSYATVRMPD 301
Query: 308 HCMLIQKCPNLEVLETRNVIGDRGLEVLGSCCKRLKRLRIERGDDEGET----VSHRGLI 363
L+++C L+ L ++I D+GLE + S CK L+ LR+ + + + ++ +GL+
Sbjct: 302 LVELLRRCSKLQKLWVMDLIEDKGLEAVASYCKELRELRVFPSEPDLDATNIPLTEQGLV 361
Query: 364 ALSEGCSELEYLAVYVSDITNASLEHMGTHLRNLCDFRLVLLD--QEEKITDLPLDRGVQ 421
+S+GC +LE + + TNA+L + NL FRL +++ + T+ PLD+G +
Sbjct: 362 FVSKGCRKLESVLYFCVQFTNAALFTIARKRPNLKCFRLCVIEPFAPDYKTNEPLDKGFK 421
Query: 422 ALLRGCDKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVGETDEGLLEFAKGCPN 481
A+ GC L+R ++ G L+D YIG++++ VR + + G++D L GC +
Sbjct: 422 AIAEGCRDLRRLSV---SGLLSDKAFKYIGKHAKKVRMLSIAFAGDSDLMLHHLLSGCES 478
Query: 482 LQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPTGRDLLAMARPFWNIELIPSR 541
L+KLE+R C F + AL A +L ++R LW+ S LL+ P N+E+I
Sbjct: 479 LKKLEIRDCP-FGDTALLEHAAKLETMRSLWMSSCFVSFGACKLLSQKMPRLNVEVI-DE 536
Query: 542 RVVVNNNMDGPVVSVHHPAHILAYYSLAGQRSDFPDTV 579
+ PV I Y ++AG R D P+ V
Sbjct: 537 HPPESRPESSPV------ERIYIYRTVAGPRMDTPEFV 568
>AT1G12820.1 | Symbols: AFB3 | auxin signaling F-box 3 |
chr1:4368879-4370780 REVERSE LENGTH=577
Length = 577
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 198/586 (33%), Positives = 289/586 (49%), Gaps = 34/586 (5%)
Query: 15 NRLVDEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCYTTTPARLRRRFP 74
N DEV++ V ++ KDR+++S VCK W++++ +RK V I CY P RL RRFP
Sbjct: 2 NYFPDEVIEHVFDFVASHKDRNSISLVCKSWHKIERFSRKEVFIGNCYAINPERLIRRFP 61
Query: 75 HLESLKLKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRRMIVKDNDLLLLA 134
L+SL LKGKP A FNL+P +WGG V PW+ + + L+ L +RM+V D L LL+
Sbjct: 62 CLKSLTLKGKPHFADFNLVPHEWGGFVHPWIEALARSRVGLEELRLKRMVVTDESLDLLS 121
Query: 135 QSRGPVLHSLKLDKCCGFSTDGLLHVSRFCRNLRVLLLEESSIDEKDGEWLHELALSNTV 194
+S SL L C GF+TDGL ++ CR+LR L L+E+ ID+ G+WL+ S T
Sbjct: 122 RSFAN-FKSLVLVSCEGFTTDGLASIAANCRHLRELDLQENEIDDHRGQWLNCFPDSCTT 180
Query: 195 LESLNFYL----TDVAAVKIEDLELLAKNCPNLVSVKITE-YEISNLVNFFRQASSLEEF 249
L SLNF T+VAA LE L PNL S+K+ + L A L +
Sbjct: 181 LMSLNFACLKGETNVAA-----LERLVARSPNLKSLKLNRAVPLDALARLMSCAPQLVDL 235
Query: 250 CGGIYNEEPEIYSAVSLPAKLCRL-------GLTYIGKNELPMMLMFXXXXXXXXXXXXX 302
G Y EP+ S L + + G + LP
Sbjct: 236 GVGSYENEPDPESFAKLMTAIKKYTSLRSLSGFLEVAPLCLPAFYPICQNLISLNLSYAA 295
Query: 303 XXXXXHCM-LIQKCPNLEVLETRNVIGDRGLEVLGSCCKRLKRLRIERGDDEGE-----T 356
H + LIQ C L+ L + IGD+GL V+ + CK L+ LR+ D GE +
Sbjct: 296 EIQGNHLIKLIQLCKRLQRLWILDSIGDKGLAVVAATCKELQELRVFPSDVHGEEDNNAS 355
Query: 357 VSHRGLIALSEGCSELEYLAVYVSDITNASLEHMGTHLRNLCDFRLVLLD--QEEKITDL 414
V+ GL+A+S GC +L + + +TNA+L + + N FRL +L+ + + IT
Sbjct: 356 VTEVGLVAISAGCPKLHSILYFCKQMTNAALIAVAKNCPNFIRFRLCILEPHKPDHITFQ 415
Query: 415 PLDRGVQALLRGCDKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVGETDEGLLE 474
LD G A+++ C L+R ++ G LTD YIG Y++ + + + G+TD+G+L
Sbjct: 416 SLDEGFGAIVQACKGLRRLSV---SGLLTDQVFLYIGMYAEQLEMLSIAFAGDTDKGMLY 472
Query: 475 FAKGCPNLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPTGRDLLAMARPFWN 534
GC ++KLE+R S F AL + ++R LW+ + G LA P N
Sbjct: 473 VLNGCKKMRKLEIRD-SPFGNAALLADVGRYETMRSLWMSSCEVTLGGCKRLAQNSPRLN 531
Query: 535 IELIPSRRVVVNNNMDGPVVSVHHPAHILAYY-SLAGQRSDFPDTV 579
+E+I NN M+ L Y ++ G R D P V
Sbjct: 532 VEIINENE---NNGMEQNEEDEREKVDKLYLYRTVVGTRKDAPPYV 574
>AT5G49980.1 | Symbols: AFB5 | auxin F-box protein 5 |
chr5:20334420-20336531 REVERSE LENGTH=619
Length = 619
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 192/584 (32%), Positives = 287/584 (49%), Gaps = 32/584 (5%)
Query: 15 NRLVDEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCYTTTPARLRRRFP 74
+ +++ VL+ V+ ++D DR+A S VCK W+ +++LTR V I CY +PARL +RF
Sbjct: 52 DHVLENVLENVLQFLDSRCDRNAASLVCKSWWRVEALTRSEVFIGNCYALSPARLTQRFK 111
Query: 75 HLESLKLKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRRMIVKDNDLLLLA 134
+ SL LKGKPR A FNL+P DWG + PWV + Q + CL+ + +RM V D+DL LLA
Sbjct: 112 RVRSLVLKGKPRFADFNLMPPDWGANFAPWVSTMAQAYPCLEKVDLKRMFVTDDDLALLA 171
Query: 135 QSRGPVLHSLKLDKCCGFSTDGLLHVSRFCRNLRVLLLEESSIDEKDGEWLHELALSNTV 194
S P L L C GF T G+ V+ CR L+VL L ES + + + +W+ T
Sbjct: 172 DS-FPGFKELILVCCEGFGTSGISIVANKCRKLKVLDLIESEVTDDEVDWISCFPEDVTC 230
Query: 195 LESLNFYLTDVAAVKIEDLELLAKNCPNLVSVKITEY-EISNLVNFFRQASSLEEFCGGI 253
LESL F + A + + LE L P L +++ + + L A L G
Sbjct: 231 LESLAFDCVE-APINFKALEGLVARSPFLKKLRLNRFVSLVELHRLLLGAPQLTSLGTGS 289
Query: 254 Y--NEEPEI-----YSAVSLPAK--LCRLGLTYIGKNELPMMLMFXXXXXXXXXXXXXXX 304
+ +EEP+ Y+A K +C G + LP +
Sbjct: 290 FSHDEEPQSEQEPDYAAAFRACKSVVCLSGFRELMPEYLPAIFPVCANLTSLNFSYANIS 349
Query: 305 XXXHCMLIQKCPNLEVLETRNVIGDRGLEVLGSCCKRLKRLRI----ERGDDEGETVSHR 360
+I C L+V + I D GL+ + + CK L+ LRI R D EG VS
Sbjct: 350 PDMFKPIILNCHKLQVFWALDSICDEGLQAVAATCKELRELRIFPFDPREDSEG-PVSEL 408
Query: 361 GLIALSEGCSELEYLAVYVSDITNASLEHMGTHLRNLCDFRLVLLDQE--EKITDLPLDR 418
GL A+SEGC +LE + + +TNA++ M + L FRL ++ + + +T P+D
Sbjct: 409 GLQAISEGCRKLESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKPMDE 468
Query: 419 GVQALLRGCDKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVGETDEGLLEFAKG 478
G A+++ C KL R A+ G LTD Y+G+Y + VR + + G++D L +G
Sbjct: 469 GFGAIVKNCKKLTRLAV---SGLLTDQAFRYMGEYGKLVRTLSVAFAGDSDMALRHVLEG 525
Query: 479 CPNLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPTGRDLLAMARPFWNIELI 538
CP LQKLE+R S F + AL + ++R++W+ S +A A P +E+I
Sbjct: 526 CPRLQKLEIRD-SPFGDVALRSGMHRYYNMRFVWMSACSLSKGCCKDIARAMPNLVVEVI 584
Query: 539 PSRRVVVNNNMDGPVVSVHHPAHILAYYSLAGQRSDFPDTVVPL 582
S N + + + Y SL G R+D P V L
Sbjct: 585 GSDDDDDNRD---------YVETLYMYRSLDGPRNDAPKFVTIL 619
>AT3G26810.1 | Symbols: AFB2 | auxin signaling F-box 2 |
chr3:9868342-9870464 FORWARD LENGTH=575
Length = 575
Score = 271 bits (693), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 191/580 (32%), Positives = 285/580 (49%), Gaps = 24/580 (4%)
Query: 15 NRLVDEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCYTTTPARLRRRFP 74
N DEV++ V ++ KDR+A+S VCK WY+++ +R+ V I CY P RL RRFP
Sbjct: 2 NYFPDEVIEHVFDFVTSHKDRNAISLVCKSWYKIERYSRQKVFIGNCYAINPERLLRRFP 61
Query: 75 HLESLKLKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRRMIVKDNDLLLLA 134
L+SL LKGKP A FNL+P +WGG V PW+ + + L+ L +RM+V D L LL+
Sbjct: 62 CLKSLTLKGKPHFADFNLVPHEWGGFVLPWIEALARSRVGLEELRLKRMVVTDESLELLS 121
Query: 135 QSRGPVLHSLKLDKCCGFSTDGLLHVSRFCRNLRVLLLEESSIDEKDGEWLHELALSNTV 194
+S SL L C GF+TDGL ++ CR+LR L L+E+ ID+ G+WL + T
Sbjct: 122 RSFVN-FKSLVLVSCEGFTTDGLASIAANCRHLRDLDLQENEIDDHRGQWLSCFPDTCTT 180
Query: 195 LESLNFYLTDVAAVKIEDLELLAKNCPNLVSVKITE-YEISNLVNFFRQASSLEEFCGGI 253
L +LNF + + LE L PNL S+K+ + L A + + G
Sbjct: 181 LVTLNFACLE-GETNLVALERLVARSPNLKSLKLNRAVPLDALARLMACAPQIVDLGVGS 239
Query: 254 YNEEPEIYSAVSLPAKLCRL-------GLTYIGKNELPMMLMFXXXXXXXXXXXXXXXXX 306
Y +P+ S + L A + + G + L
Sbjct: 240 YENDPDSESYLKLMAVIKKCTSLRSLSGFLEAAPHCLSAFHPICHNLTSLNLSYAAEIHG 299
Query: 307 XHCM-LIQKCPNLEVLETRNVIGDRGLEVLGSCCKRLKRLRIERGDDEG---ETVSHRGL 362
H + LIQ C L+ L + IGD+GLEV+ S CK L+ LR+ D G V+ GL
Sbjct: 300 SHLIKLIQHCKKLQRLWILDSIGDKGLEVVASTCKELQELRVFPSDLLGGGNTAVTEEGL 359
Query: 363 IALSEGCSELEYLAVYVSDITNASLEHMGTHLRNLCDFRLVLL--DQEEKITDLPLDRGV 420
+A+S GC +L + + +TNA+L + + N FRL +L ++ + +T PLD G
Sbjct: 360 VAISAGCPKLHSILYFCQQMTNAALVTVAKNCPNFIRFRLCILEPNKPDHVTSQPLDEGF 419
Query: 421 QALLRGCDKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVGETDEGLLEFAKGCP 480
A+++ C K G LTD YIG Y+ + + + G+TD+G+L GC
Sbjct: 420 GAIVKAC---KSLRRLSLSGLLTDQVFLYIGMYANQLEMLSIAFAGDTDKGMLYVLNGCK 476
Query: 481 NLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGYGASPTGRDLLAMARPFWNIELIPS 540
++KLE+R S F + AL ++ ++R LW+ + +G LA P+ N+E+I
Sbjct: 477 KMKKLEIRD-SPFGDTALLADVSKYETMRSLWMSSCEVTLSGCKRLAEKAPWLNVEIINE 535
Query: 541 RRVVVNNNMDGPVVSVHHPAHILAYY-SLAGQRSDFPDTV 579
NN M+ L Y ++ G R D P V
Sbjct: 536 ND---NNRMEENGHEGRQKVDKLYLYRTVVGTRMDAPPFV 572
>AT4G24390.1 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 290/606 (47%), Gaps = 72/606 (11%)
Query: 15 NRLVDEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCYTTTPARLRRRFP 74
+ +++ VL+ V+ ++ DR+AVS VC+ WY +++ TR V I CY+ +PARL RF
Sbjct: 52 DHVLENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFK 111
Query: 75 HLESLKLKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRRMIVKDNDLLLLA 134
+ SL LKGKPR A FNL+P +WG +PWV + + L+ +H +RM V D+DL LLA
Sbjct: 112 RVRSLVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLA 171
Query: 135 QSRGPVLHSLKLDKCCGFSTDGLLHVSRFCRNLRVLLLEESSIDEKDGEWLHELALSNTV 194
+S P L L C GF T G+ V+ CR L+VL L ES + + + +W+ T
Sbjct: 172 ESF-PGFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETH 230
Query: 195 LESLNF--------------------YLTDVAA---VKIEDLELLAKNCPNLVSVKITEY 231
LESL+F +L + V +E+L L P L S+ +
Sbjct: 231 LESLSFDCVESPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSF 290
Query: 232 EISNLVNFFRQASSLEEF--------CGGIYNEEPEIYSAVS-LPAKLCRLGLTYIGKNE 282
N+ +Q F G PE A+S + A L L +Y N
Sbjct: 291 SPDNVPQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSY--ANI 348
Query: 283 LPMMLMFXXXXXXXXXXXXXXXXXXHCMLIQKCPNLEVLETRNVIGDRGLEVLGSCCKRL 342
P ML +I C N+ V + I D GL+ + + CK L
Sbjct: 349 SPHMLK---------------------PIISNCHNIRVFWALDSIRDEGLQAVAATCKEL 387
Query: 343 KRLRI----ERGDDEGETVSHRGLIALSEGCSELEYLAVYVSDITNASLEHMGTHLRNLC 398
+ LRI R D EG VS GL A+SEGC +LE + + ++TN ++ M + L
Sbjct: 388 RELRIFPFDPREDSEG-PVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLT 446
Query: 399 DFRLVLLDQE--EKITDLPLDRGVQALLRGCDKLKRFALYLRRGGLTDVGLSYIGQYSQN 456
FRL ++ + + +T P+D G A+++ C KL R A+ G LTD SYIG+Y +
Sbjct: 447 VFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAV---SGLLTDEAFSYIGEYGKL 503
Query: 457 VRWMLLGAVGETDEGLLEFAKGCPNLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGY 516
+R + + G +D+ L +GCP LQKLE+R S F + L + +++R++W+
Sbjct: 504 IRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRD-SPFGDVGLRSGMHRYSNMRFVWLSSC 562
Query: 517 GASPTGRDLLAMARPFWNIELIPSRRVVVNNNMDGPVVSVHHPAHILAYYSLAGQRSDFP 576
S G ++ A P +E+ + + + D V+ + + Y SL G R D P
Sbjct: 563 LISRGGCRGVSHALPNVVVEVFGA-----DGDDDEDTVTGDYVETLYLYRSLDGPRKDAP 617
Query: 577 DTVVPL 582
V L
Sbjct: 618 KFVTIL 623
>AT4G24390.2 | Symbols: | RNI-like superfamily protein |
chr4:12613909-12615966 REVERSE LENGTH=623
Length = 623
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 290/606 (47%), Gaps = 72/606 (11%)
Query: 15 NRLVDEVLDCVIPYIDDPKDRDAVSQVCKCWYELDSLTRKHVTIALCYTTTPARLRRRFP 74
+ +++ VL+ V+ ++ DR+AVS VC+ WY +++ TR V I CY+ +PARL RF
Sbjct: 52 DHVLENVLENVLQFLTSRCDRNAVSLVCRSWYRVEAQTRLEVFIGNCYSLSPARLIHRFK 111
Query: 75 HLESLKLKGKPRAAMFNLIPEDWGGHVTPWVLEINQYFDCLKSLHFRRMIVKDNDLLLLA 134
+ SL LKGKPR A FNL+P +WG +PWV + + L+ +H +RM V D+DL LLA
Sbjct: 112 RVRSLVLKGKPRFADFNLMPPNWGAQFSPWVAATAKAYPWLEKVHLKRMFVTDDDLALLA 171
Query: 135 QSRGPVLHSLKLDKCCGFSTDGLLHVSRFCRNLRVLLLEESSIDEKDGEWLHELALSNTV 194
+S P L L C GF T G+ V+ CR L+VL L ES + + + +W+ T
Sbjct: 172 ESF-PGFKELTLVCCEGFGTSGIAIVANKCRQLKVLDLMESEVTDDELDWISCFPEGETH 230
Query: 195 LESLNF--------------------YLTDVAA---VKIEDLELLAKNCPNLVSVKITEY 231
LESL+F +L + V +E+L L P L S+ +
Sbjct: 231 LESLSFDCVESPINFKALEELVVRSPFLKKLRTNRFVSLEELHRLMVRAPQLTSLGTGSF 290
Query: 232 EISNLVNFFRQASSLEEF--------CGGIYNEEPEIYSAVS-LPAKLCRLGLTYIGKNE 282
N+ +Q F G PE A+S + A L L +Y N
Sbjct: 291 SPDNVPQGEQQPDYAAAFRACKSIVCLSGFREFRPEYLLAISSVCANLTSLNFSY--ANI 348
Query: 283 LPMMLMFXXXXXXXXXXXXXXXXXXHCMLIQKCPNLEVLETRNVIGDRGLEVLGSCCKRL 342
P ML +I C N+ V + I D GL+ + + CK L
Sbjct: 349 SPHMLK---------------------PIISNCHNIRVFWALDSIRDEGLQAVAATCKEL 387
Query: 343 KRLRI----ERGDDEGETVSHRGLIALSEGCSELEYLAVYVSDITNASLEHMGTHLRNLC 398
+ LRI R D EG VS GL A+SEGC +LE + + ++TN ++ M + L
Sbjct: 388 RELRIFPFDPREDSEG-PVSGVGLQAISEGCRKLESILYFCQNMTNGAVTAMSENCPQLT 446
Query: 399 DFRLVLLDQE--EKITDLPLDRGVQALLRGCDKLKRFALYLRRGGLTDVGLSYIGQYSQN 456
FRL ++ + + +T P+D G A+++ C KL R A+ G LTD SYIG+Y +
Sbjct: 447 VFRLCIMGRHRPDHVTGKPMDDGFGAIVKNCKKLTRLAV---SGLLTDEAFSYIGEYGKL 503
Query: 457 VRWMLLGAVGETDEGLLEFAKGCPNLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQGY 516
+R + + G +D+ L +GCP LQKLE+R S F + L + +++R++W+
Sbjct: 504 IRTLSVAFAGNSDKALRYVLEGCPKLQKLEIRD-SPFGDVGLRSGMHRYSNMRFVWLSSC 562
Query: 517 GASPTGRDLLAMARPFWNIELIPSRRVVVNNNMDGPVVSVHHPAHILAYYSLAGQRSDFP 576
S G ++ A P +E+ + + + D V+ + + Y SL G R D P
Sbjct: 563 LISRGGCRGVSHALPNVVVEVFGA-----DGDDDEDTVTGDYVETLYLYRSLDGPRKDAP 617
Query: 577 DTVVPL 582
V L
Sbjct: 618 KFVTIL 623
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 309 CMLIQKCPNLEVLETRNV-IGDRGLEVLGSCCKRLKRLRIERGDDEGETVSHRGLIALSE 367
C L QKC +L+ L+ + +GD+GL +G CK+L+ L + E ++ G+I L
Sbjct: 159 CSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQLEELNLRF----CEGLTDVGVIDLVV 214
Query: 368 GCSE-LEYLAVYVS-DITNASLEHMGTHLRNLCDFRLVLLDQEEKITDLPLDRGVQALLR 425
GCS+ L+ + V S IT+ SLE +G+H C VL E I D+G+ A+ +
Sbjct: 215 GCSKSLKSIGVAASAKITDLSLEAVGSH----CKLLEVLYLDSEYIH----DKGLIAVAQ 266
Query: 426 GCDKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVGE-TDEGLLEFAKGCPNLQK 484
GC +LK L L+ +TDV + +G+ ++ + L + TD+G+ KG L+
Sbjct: 267 GCHRLKN--LKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKD 324
Query: 485 LEMRGCSFFSEHALAVAATQLTSLRYLWVQG 515
L + C F S L A L + + G
Sbjct: 325 LTLSDCYFVSCKGLEAIAHGCKELERVEING 355
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 32/211 (15%)
Query: 327 IGDRGLEVLGSCCKRLKRLRIERGDDEGETVSHRGLIALSEGCSELEYL---AVYVSDIT 383
I D LE +GS CK L+ L ++ E + +GLIA+++GC L+ L V V+D+
Sbjct: 231 ITDLSLEAVGSHCKLLEVLYLD-----SEYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVA 285
Query: 384 NASLEHMGTHLRNLCDFRL---------VLLDQEEKITDLPLD-------RGVQALLRGC 427
A++ + T L L + + +K+ DL L +G++A+ GC
Sbjct: 286 FAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGC 345
Query: 428 DKLKRFALYLRRGGLTDVG---LSYIGQYSQNVRWM-LLGAVGETDEGLLEFAKGCPNLQ 483
+L+R + G ++G + IG+ ++ + LL + L E KGC +L+
Sbjct: 346 KELERVEI----NGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLE 401
Query: 484 KLEMRGCSFFSEHALAVAATQLTSLRYLWVQ 514
L + CS + A+ A +L+ L ++
Sbjct: 402 ILHLVDCSGIGDIAMCSIAKGCRNLKKLHIR 432
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 98/238 (41%), Gaps = 52/238 (21%)
Query: 313 QKCPNLEVLETRNV--IGDRGLEVLGSCCKRLKRLRIERGDDEGETVSHRGLIALSEGCS 370
+ CP+L L NV I D GL + C +L++L + R T++ +GL+A+++ C
Sbjct: 174 RSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRC----STITDKGLVAIAKSCP 229
Query: 371 ELEYLAVYV-SDITNASLEHMGTHLRNLCDFRLVLLDQEEKITDLPL--DRGVQALLRG- 426
L L + S I + L + L + I + PL D+G+ +LL
Sbjct: 230 NLTELTLEACSRIGDEGLLAIARSCSKL---------KSVSIKNCPLVRDQGIASLLSNT 280
Query: 427 -CDKLKRFALYLRRGGLTDVGLSYIGQYSQNVR---------------WMLLGAVG---- 466
C K L L+ +TDV L+ +G Y ++ W++ VG
Sbjct: 281 TCSLAK---LKLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKL 337
Query: 467 ----------ETDEGLLEFAKGCPNLQKLEMRGCSFFSEHALAVAATQLTSLRYLWVQ 514
TD GL KGCPN++K + S++ L A SL L ++
Sbjct: 338 NSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLE 395
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 311 LIQKCPNLE--VLETRNVIGDRGLEVLGSCCKRLKRLRIERGDDEGETVSHRGLIA-LSE 367
+ + CPNL LE + IGD GL + C +LK + I+ V +G+ + LS
Sbjct: 224 IAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKSVSIK----NCPLVRDQGIASLLSN 279
Query: 368 GCSELEYLAVYVSDITNASLEHMGTHLRNLCDFRLVLLDQEEKITDLPLDRGVQALLRGC 427
L L + + ++T+ SL +G + ++ D L L + + GV G
Sbjct: 280 TTCSLAKLKLQMLNVTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGV-----GL 334
Query: 428 DKLKRFALYLRRGGLTDVGLSYIGQYSQNVRWMLLGAVG-ETDEGLLEFAKGCPNLQKLE 486
KL + + G+TD+GL +G+ N++ ++ +D GL+ FAK +L+ L+
Sbjct: 335 QKLNSLTITACQ-GVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQ 393
Query: 487 MRGC 490
+ C
Sbjct: 394 LEEC 397
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 318 LEVLETRNVIG--DRGLEVLGSCCKRLKRLRIERGDDEGETVSHRGLIALSEGCSELEYL 375
L VL N G D GL +G C L+ L + +S +GL A++EGC +L L
Sbjct: 100 LRVLNLHNCKGITDTGLASIGRCLSLLQFLDVSYC----RKLSDKGLSAVAEGCHDLRAL 155
Query: 376 AVY-VSDITNASLEHMGTHLRNLCDFRLVLLDQEEKITDLPLDRGVQALLRGCDKLKRFA 434
+ IT+ SL+ + R D + L ITD G+ L++GC K+K
Sbjct: 156 HLAGCRFITDESLKSLSERCR---DLEALGLQGCTNITD----SGLADLVKGCRKIKSLD 208
Query: 435 LYLRRGGLTDVGLSYIGQY--SQNVRWMLLGAVGETDEGLLEFAKGCPNLQKLEMRGCSF 492
+ + + D G+S + + S LL +E + A+ C NL+ L + GC
Sbjct: 209 IN-KCSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRD 267
Query: 493 FSEHALAVAA----TQLTSLRYLW 512
S+ ++ + A L +LR W
Sbjct: 268 ISDESIMLLADSCKDSLKNLRMDW 291