Miyakogusa Predicted Gene
- Lj0g3v0010869.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0010869.1 Non Chatacterized Hit- tr|I1H104|I1H104_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,25.73,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR:
pentatricopeptide repeat domain,Pentatricopept,CUFF.598.1
(621 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 340 1e-93
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 4e-41
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 4e-41
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 2e-40
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 159 4e-39
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 8e-39
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 156 4e-38
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 4e-37
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 149 6e-36
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 9e-36
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 5e-35
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 7e-34
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 8e-34
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 1e-33
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 1e-33
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 3e-31
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 5e-31
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 132 5e-31
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 5e-30
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 8e-30
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 1e-29
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 5e-29
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 124 1e-28
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 120 3e-27
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 5e-27
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 117 3e-26
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 6e-26
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 114 2e-25
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 8e-25
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-24
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 1e-24
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 3e-24
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 100 6e-21
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 99 6e-21
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 99 7e-21
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 98 1e-20
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 95 2e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 94 3e-19
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 5e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 90 4e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 87 2e-17
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 3e-17
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 86 6e-17
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 85 1e-16
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 85 2e-16
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-14
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 76 7e-14
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 74 3e-13
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 74 3e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 7e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 71 2e-12
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 70 3e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 70 4e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 64 4e-10
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 62 1e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 61 3e-09
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 59 8e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 8e-09
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 58 2e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 57 5e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 54 3e-07
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 3e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 53 7e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 52 8e-07
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 50 5e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 50 6e-06
AT2G32230.1 | Symbols: PRORP1 | proteinaceous RNase P 1 | chr2:1... 49 9e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-05
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 310/558 (55%), Gaps = 48/558 (8%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++N +I+ C G I A T+ +M P+ VTYNTLI C+ K +
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD-------G 259
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+L M ++ L PN +Y +I C R++E +L M +G S +Y+ +I
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+CK +AL M EML G+ P V Y LI +C + A + +M +RG+ P
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
RTY TLV+ + KG ++ + + E+ GF SPS+VTYNALI+G C +
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF--------SPSVVTYNALINGHCVTGKM 431
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
++A+ +L M E L PD VSYS V+SGF R ++ +A +K EM +K P D T
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK-GIKP-DTITYS 489
Query: 353 SLVKDL----------------------SNHDTFSSLVNDYCAEDKAEMALKLR---YQA 387
SL++ + T+++L+N YC E E AL+L +
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 388 QYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKS 447
LPD V+Y +L+NGL+K++ +R AKRLLL ++PS + Y LIE C+N EFKS
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE--SVPSDVTYHTLIENCSNIEFKS 607
Query: 448 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 507
VV L+KGF M+G++ EA + ++ML +N++P+G YN++I HC G++ KAY +YKEM+
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 508 HYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLKILDEIDPERCIIY 567
GF+ H +V+AL+KAL+ + + NE++ VI + LRSC L+++EQ K+L EI+ +
Sbjct: 668 KSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMD 727
Query: 568 ALLDVLAEKAMDGLLLDG 585
+LDVLAE A DG L +G
Sbjct: 728 VVLDVLAEMAKDGFLPNG 745
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/434 (31%), Positives = 200/434 (46%), Gaps = 94/434 (21%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKN----- 102
E L+S+N VI LC EGR++E VL EM D VTYNTLI C+ E N
Sbjct: 272 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK-EGNFHQAL 330
Query: 103 --------HNLSIPYVRIVELYHQMC----------------VRELSPNETTYRCMIRLF 138
H L+ + L H MC VR L PNE TY ++ F
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 139 -----------------------------------CDRNRVEEAVGILRLMAEKGLSPHA 163
C ++E+A+ +L M EKGLSP
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
SYS ++S FC++ ++ +AL +K EM++KGI PD Y LIQ C QRR EA DL++E
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
ML G+ P TY L+ AYC++G+ K L +E+++KG L P +VTY+ LI
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL--------PDVVTYSVLI 562
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG-----FRRIRELRKAFELKLEMD 338
+GL R EA +L + P +V+Y +I F+ + L K F +K M
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 339 QKETCWPLDQDTNESLVKDLSNHD--TFSSLVNDYC-AED--KAEMALKLRYQAQYLPDS 393
+ + + ES++ D ++ +++ +C A D KA K ++ +L +
Sbjct: 623 EADQVF-------ESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHT 675
Query: 394 VSYCLLLNGLHKKA 407
V+ L+ LHK+
Sbjct: 676 VTVIALVKALHKEG 689
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/453 (25%), Positives = 213/453 (47%), Gaps = 49/453 (10%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P ++YN ++ A +++N I + V + +M ++SPN TY +IR FC
Sbjct: 167 PGVLSYNAVLDATIRSKRN----ISFAENV--FKEMLESQVSPNVFTYNILIRGFCFAGN 220
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
++ A+ + M KG P+ +Y+ +I +CK +++ ++ M KG+ P++ +Y +
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
+I LC + R+ E + EM RG S TY+TL++ YC +G F + + E+++ G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+PS++TY +LIH +C + A+E L M L P+E +Y+ ++ GF +
Sbjct: 341 --------LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
+ +A+ + EM+ D + S+V T+++L+N +C K E A+ +
Sbjct: 393 KGYMNEAYRVLREMN--------DNGFSPSVV-------TYNALINGHCVTGKMEDAIAV 437
Query: 384 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC 440
+ PD VSY +L+G + Y V L + ++EK
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRS------------YDVDEALRVKRE-----MVEKG 480
Query: 441 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 500
+ + L++GF + EA + ML P+ Y LI +C+ G++ KA
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 501 DMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 533
++ EM+ G + + + LI L R E
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 130/479 (27%), Positives = 219/479 (45%), Gaps = 59/479 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+ N+++ C RI EA ++ +M + PD VT+ TL+ + HN + V
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ----HNKASEAV 190
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+VE +M V+ P+ TY +I C R + A+ +L M + + YS +I
Sbjct: 191 ALVE---RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
CK + + AL + EM +KGI PDV Y LI LC+ R +A L +ML R ++
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T+++L++A+ +G+ + L DE+IQ+ S P++VTYN+LI+G C
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR--------SIDPNIVTYNSLINGFCMHD 359
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
R DEA +I M PD V+Y+ +I+GF + +++ EL +M ++
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGL-------- 411
Query: 351 NESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 407
+ N T+++L++ + D A+M K P+ ++Y LL+GL K
Sbjct: 412 -------VGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIE--------------------KCANNEFKS 447
+ K +++F + P Y+I+ E K + +
Sbjct: 465 --KLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 448 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
++ GF +GL EA M P+ YN LI H G+ + ++ KEM
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 191/446 (42%), Gaps = 41/446 (9%)
Query: 70 RIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELS 125
++ EA + EM P V ++ L+SA + +K + ++ +M + +S
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKK-------FDLVISFGEKMEILGVS 97
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
N TY MI C R+++ A+ IL M + G P + + +++ FC + +A+ +
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
+M++ G PD + L+ L + EA L + M+++G P TY ++ C
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
+GE +L ++ ++KG +V Y+ +I LC ++ D+AL + M
Sbjct: 218 RGEPDLALNLLNK-MEKG-------KIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
+ PD +YS++IS A L +M L++ N ++V TF+
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDM--------LERKINPNVV-------TFN 314
Query: 366 SLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
SL++ + E K AE Q P+ V+Y L+NG A+++ +
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 423 HCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 481
CL P + Y+ LI C + +EL + RGLV T++H ++
Sbjct: 375 DCL--PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV-TYTTLIHGFFQASDC 431
Query: 482 VYNLLIFDHCIGGNVHKAYDMYKEML 507
++F + VH Y +L
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 95/246 (38%), Gaps = 37/246 (15%)
Query: 38 NVLIPGFAAGKATTEKC--------------LVSFNAVIKRLCGEGRIREAETVLQEMTD 83
N LI GF K + V++ +I A+ V ++M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443
Query: 84 ----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFC 139
P+ +TYNTL+ C KN L V ++ + ++ P+ TY M C
Sbjct: 444 DGVHPNIMTYNTLLDGLC---KNGKLEKAMV----VFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 140 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 199
+VE+ + ++ KG+ P +Y+ +IS FCK +A + ++M + G PD
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
Y LI+ + +L +EM + TY + + L D
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM------------LHDGR 604
Query: 260 IQKGFL 265
+ KGFL
Sbjct: 605 LDKGFL 610
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 229/513 (44%), Gaps = 60/513 (11%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNH 103
K E +V+ N+++ C RI +A +++ +M + PD T+NTLI H
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR----H 199
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
N + V +V+ +M V+ P+ TY ++ C R ++ A+ +L+ M + + P
Sbjct: 200 NRASEAVALVD---RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGV 256
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
Y+ II C K + AL + EM +KGI P+V Y LI+ LC+ R +A L +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M+ R ++P T+ L++A+ +G+ + L DE+I++ S P + TY++LI
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--------SIDPDIFTYSSLI 368
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
+G C R DEA + M P+ V+Y+ +I GF + + + + EL EM Q+
Sbjct: 369 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL- 427
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLL 400
+ N T+++L++ + D A++ K LPD ++Y +LL
Sbjct: 428 --------------VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 401 NGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIE--------------------KC 440
+GL A L++F + P Y+I+IE K
Sbjct: 474 DGLCNNGKVETA--LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 441 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 500
+ ++ GF +GL EA M P+ YN LI H G+ +
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 501 DMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 533
++ +EM FV S + L+ + D R ++
Sbjct: 592 ELIREMRSCRFVGDA-STIGLVTNMLHDGRLDK 623
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 196/470 (41%), Gaps = 74/470 (15%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P V ++ L+SA + K + ++ L QM +S N TY +I FC R++
Sbjct: 79 PSIVEFSKLLSAIAKMNK-------FDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ A+ +L M + G P + + +++ FC + A+ + +M++ G PD +
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
LI L R EA L M+++G P TY +V C +G+ L ++ Q
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 264 FLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEAL 296
P V P++VTYN+LI LC + R +A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 297 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 356
+L M E ++P+ V++SA+I F + +L +A +L EM ++ +D D
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS----IDPDIF----- 362
Query: 357 DLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAK 413
T+SSL+N +C D+ A+ +L P+ V+Y L+ G K R +
Sbjct: 363 ------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK--AKRVDE 414
Query: 414 RLLLFYIVAHCLTIPSYIIYDILI------EKCANNE--FKSVVE------------LVK 453
+ LF ++ + + + Y LI +C N + FK +V L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 454 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
G G V A + + P+ YN++I C G V +D++
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/403 (20%), Positives = 160/403 (39%), Gaps = 51/403 (12%)
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y +I + ++ A+ + +M+ FP + + L+ + + L ++M
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
G+S TY L+ +C + + S + ++++ G + P +VT N+L++G
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG--------YEPDIVTLNSLLNG 160
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
C R +A+ ++ M EM PD +++ +I G R +A L M K C P
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQP 219
Query: 346 ---------------LDQDTNESLVKDLSNHD------TFSSLVNDYCAEDKAEMALKLR 384
D D SL+K + ++++++ C AL L
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 385 YQAQ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFYI--------VAHCLTIPSYI-- 431
+ P+ V+Y L+ L A RLL I V I +++
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 432 --------IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 483
+YD +I++ + + + L+ GF M ++EA + M+ ++ P Y
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 484 NLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
N LI C V + ++++EM G V + + LI +
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 38/312 (12%)
Query: 274 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
PS+V ++ L+ + + D + + M + + + +YS +I+ F R +L A +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 334 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYL 390
+M + +V T +SL+N +C ++ A+ L Q Y
Sbjct: 139 LAKM--------MKLGYEPDIV-------TLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 391 PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE 450
PDS ++ L++GL + + A L+ +V C P + Y I+
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ--PDLVTYGIV-------------- 227
Query: 451 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
V G RG ++ A M P +YN +I C NV+ A +++ EM + G
Sbjct: 228 -VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG 286
Query: 511 FVCHMFSVLALIKALYCDERYNEMSWVIRNTL-RSCNLNDSEQLKILDEIDPERCIIYA- 568
++ + +LI+ L R+++ S ++ + + R N N ++D E ++ A
Sbjct: 287 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 569 -LLDVLAEKAMD 579
L D + ++++D
Sbjct: 347 KLYDEMIKRSID 358
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 225/509 (44%), Gaps = 60/509 (11%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
E +V+ ++++ C RI +A ++ +M + PD T+ TLI HN +
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL----HNKAS 205
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
V +V+ QM R P+ TY ++ C R ++ A+ +L+ M + + Y+
Sbjct: 206 EAVALVD---QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
II CK K M AL + EM +KGI PDV Y LI LC+ R +A L +M+ R
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
++P T+ L++A+ +G+ + L DE+I++ S P + TY++LI+G C
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR--------SIDPDIFTYSSLINGFC 374
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
R DEA + M P+ V+YS +I GF + + + + EL EM Q+
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL----- 429
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLH 404
+ N T+++L++ + D A+M K P+ ++Y +LL+GL
Sbjct: 430 ----------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVEL------------ 451
K + AK +++F + P Y+I+IE C + + EL
Sbjct: 480 KNG--KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 452 -------VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYK 504
+ GF +G EA M P YN LI G+ + ++ K
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIK 597
Query: 505 EMLHYGFVCHMFSVLALIKALYCDERYNE 533
EM GF S + L+ + D R ++
Sbjct: 598 EMRSCGFAGDA-STIGLVTNMLHDGRLDK 625
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 208/503 (41%), Gaps = 68/503 (13%)
Query: 31 KGLVSPPNVLIPGF--AAGKATTEKCLVSFNA-----VIKRLCGEGRIREAETVLQEMTD 83
+G+ +PP V P F G E+ S + + RL ++ +A + +M
Sbjct: 19 QGIGNPPTV--PSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVK 76
Query: 84 ----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFC 139
P V +N L+SA + K + ++ L QM +S + TY I FC
Sbjct: 77 SRPFPSIVEFNKLLSAVAKMNK-------FELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 140 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 199
R+++ A+ +L M + G P + S +++ +C +K + A+ + +M++ G PD
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
+ LI L + EA L +M+ RG P TY T+V C +G+ L +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK- 248
Query: 260 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
++KG +V YN +I GLC ++ D+AL + M + PD +YS++IS
Sbjct: 249 MEKG-------KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 320 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEM 379
A L +M +++ N ++V TFS+L++ + E K
Sbjct: 302 CLCNYGRWSDASRLLSDM--------IERKINPNVV-------TFSALIDAFVKEGKLVE 346
Query: 380 ALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDIL 436
A KL + PD +Y L+NG AK + I C P+ + Y L
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYSTL 404
Query: 437 IEK-CANNEFKSVVELVKGFRMRGLVNEAA----------RARD---------TMLHRNY 476
I+ C + +EL + RGLV +ARD M+
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 477 RPEGAVYNLLIFDHCIGGNVHKA 499
P YN+L+ C G + KA
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKA 487
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 222/505 (43%), Gaps = 56/505 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+ S+N VI +C GRI+EA +L M PD ++Y+T+++ C +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD------- 298
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++ +L M + L PN Y +I L C ++ EA M +G+ P Y+ +I
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
FCK ++ A + EM + I PDV Y +I C ++EA LF EM +G+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T+ L+ YC G F + + +IQ G SP++VTY LI GLC
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC--------SPNVVTYTTLIDGLCKEG 470
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
D A E+L M ++ L P+ +Y+++++G + + +A +L E + L+ DT
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA----GLNADT 526
Query: 351 NESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 407
T+++L++ YC DKA+ LK P V++ +L+NG
Sbjct: 527 V-----------TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAAR 466
++LL + + P+ ++ L+++ C N K+ + K
Sbjct: 576 MLEDGEKLLNWMLAKG--IAPNATTFNSLVKQYCIRNNLKAATAIYK------------- 620
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
M R P+G Y L+ HC N+ +A+ +++EM GF + + LIK
Sbjct: 621 ---DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 527 CDERYNEMSWVIRNTLRSCNLNDSE 551
+++ E V R D E
Sbjct: 678 KRKKFLEAREVFDQMRREGLAADKE 702
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 228/517 (44%), Gaps = 65/517 (12%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD-------PDCVTYNTLISAACEAEKNHNLSIPYV 110
F+ + L G +REA V ++M + C Y T +S C K I +
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--KTATAIIVFR 235
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E+ + N +Y +I C R++EA +L LM KG +P SYS ++
Sbjct: 236 EFPEV-------GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ +C+ E+ K ++ M KG+ P+ + YG +I LLC +L EA + F EM+ +G+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y TL++ +C +G+ K F + +P ++TY A+I G C
Sbjct: 349 PDTVVYTTLIDGFCKRGDI--------RAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ----------- 339
EA ++ M L+PD V+++ +I+G+ + ++ AF + M Q
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 340 ---KETCWPLDQDTNESLVKDL------SNHDTFSSLVNDYCAEDKAEMALKL--RYQAQ 388
C D D+ L+ ++ N T++S+VN C E A+KL ++A
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 389 YL-PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKS 447
L D+V+Y L++ K A+ +L ++ L P+ + +++L+
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILK-EMLGKGLQ-PTIVTFNVLMN--------- 569
Query: 448 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 507
GF + G++ + + + ML + P +N L+ +CI N+ A +YK+M
Sbjct: 570 ------GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 508 HYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRS 544
G + L+K +C R + +W + ++
Sbjct: 624 SRGVGPDGKTYENLVKG-HCKARNMKEAWFLFQEMKG 659
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAAC------EAEKNHNL 105
V++ ++ C G + +A+ +L+EM P VT+N L++ C + EK
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK---- 582
Query: 106 SIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
L + M + ++PN TT+ +++ +C RN ++ A I + M +G+ P +
Sbjct: 583 ---------LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y ++ CK + M +A + EM KG V Y +LI+ +++ LEAR++F +M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 226 LRGMSPGGRTYD 237
G++ +D
Sbjct: 694 REGLAADKEIFD 705
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 222/505 (43%), Gaps = 56/505 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+ S+N VI +C GRI+EA +L M PD ++Y+T+++ C +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD------- 298
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++ +L M + L PN Y +I L C ++ EA M +G+ P Y+ +I
Sbjct: 299 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 358
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
FCK ++ A + EM + I PDV Y +I C ++EA LF EM +G+
Sbjct: 359 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 418
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T+ L+ YC G F + + +IQ G SP++VTY LI GLC
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC--------SPNVVTYTTLIDGLCKEG 470
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
D A E+L M ++ L P+ +Y+++++G + + +A +L E + L+ DT
Sbjct: 471 DLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA----GLNADT 526
Query: 351 NESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 407
T+++L++ YC DKA+ LK P V++ +L+NG
Sbjct: 527 V-----------TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAAR 466
++LL + + P+ ++ L+++ C N K+ + K
Sbjct: 576 MLEDGEKLLNWMLAKG--IAPNATTFNSLVKQYCIRNNLKAATAIYK------------- 620
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
M R P+G Y L+ HC N+ +A+ +++EM GF + + LIK
Sbjct: 621 ---DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFL 677
Query: 527 CDERYNEMSWVIRNTLRSCNLNDSE 551
+++ E V R D E
Sbjct: 678 KRKKFLEAREVFDQMRREGLAADKE 702
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 127/517 (24%), Positives = 228/517 (44%), Gaps = 65/517 (12%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD-------PDCVTYNTLISAACEAEKNHNLSIPYV 110
F+ + L G +REA V ++M + C Y T +S C K I +
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCY--KTATAIIVFR 235
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E+ + N +Y +I C R++EA +L LM KG +P SYS ++
Sbjct: 236 EFPEV-------GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ +C+ E+ K ++ M KG+ P+ + YG +I LLC +L EA + F EM+ +G+
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y TL++ +C +G+ K F + +P ++TY A+I G C
Sbjct: 349 PDTVVYTTLIDGFCKRGDI--------RAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ----------- 339
EA ++ M L+PD V+++ +I+G+ + ++ AF + M Q
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 340 ---KETCWPLDQDTNESLVKDL------SNHDTFSSLVNDYCAEDKAEMALKL--RYQAQ 388
C D D+ L+ ++ N T++S+VN C E A+KL ++A
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 389 YL-PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKS 447
L D+V+Y L++ K A+ +L ++ L P+ + +++L+
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILK-EMLGKGLQ-PTIVTFNVLMN--------- 569
Query: 448 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 507
GF + G++ + + + ML + P +N L+ +CI N+ A +YK+M
Sbjct: 570 ------GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 508 HYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRS 544
G + L+K +C R + +W + ++
Sbjct: 624 SRGVGPDGKTYENLVKG-HCKARNMKEAWFLFQEMKG 659
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAAC------EAEKNHNL 105
V++ ++ C G + +A+ +L+EM P VT+N L++ C + EK
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK---- 582
Query: 106 SIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
L + M + ++PN TT+ +++ +C RN ++ A I + M +G+ P +
Sbjct: 583 ---------LLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKT 633
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y ++ CK + M +A + EM KG V Y +LI+ +++ LEAR++F +M
Sbjct: 634 YENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Query: 226 LRGMSPGGRTYD 237
G++ +D
Sbjct: 694 REGLAADKEIFD 705
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 222/494 (44%), Gaps = 66/494 (13%)
Query: 54 CLVSFNAVIKRLCGEGRIREAETVL-QEMTD---PDCVTYNTLISAACEAEKNHNLSIPY 109
C + NA LC EG+I +AE +L +EM P+ V YNT+I C + +L
Sbjct: 357 CSILLNA----LCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC---RKGDLVGAR 409
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
++I + Q + P+ Y C+IR FC+ +E A + M KG+SP ++Y+ +
Sbjct: 410 MKIEAMEKQ----GMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I + + E K ++ EM D G P+V +YG LI LC +LLEA+ + ++M RG+
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
SP R Y+ L++ C KG+ F E+++KG +LVTYN LI GL
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKG--------IELNLVTYNTLIDGLSMT 577
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
+ EA ++L + L PD +Y+++ISG+ +++ C L ++
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR-------------CIALYEE 624
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATS 409
S +K T+ L++ C ++ E+ +L + PD
Sbjct: 625 MKRSGIK--PTLKTYHLLIS-LCTKEGIELTERLFGEMSLKPD----------------- 664
Query: 410 RFAKRLLLFYIVAHCLTI-----PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
LL++ V HC + ++ + +IEK + + L+ G G + E
Sbjct: 665 -----LLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
Query: 465 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
D M R PE YN+++ HC + AY Y+EM GF+ + L+
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSG 779
Query: 525 LYCDERYNEMSWVI 538
L + R E VI
Sbjct: 780 LKEEWRSKEAEIVI 793
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/495 (22%), Positives = 207/495 (41%), Gaps = 68/495 (13%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+N +I LC R+ +AE + EM P +TYNTLI C+A +
Sbjct: 217 YNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPE-------KSF 269
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
++ +M + P+ T+ +++ VE+A +L+ M + G P A ++S + +
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
N++ AL + +D G+ + + +L+ LC + ++ +A ++ + +G+ P
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
Y+T+++ YC KG+ ++ E ++K P + YN LI C +
Sbjct: 390 VIYNTMIDGYCRKGDLVGA-RMKIEAMEK-------QGMKPDHLAYNCLIRRFCELGEME 441
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
A + + M + P +Y+ +I G+ R E K F++ EM+ T
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT----------- 490
Query: 354 LVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKA--- 407
+ N ++ +L+N C K A++ + P Y +L++G K
Sbjct: 491 ----MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 408 -TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAAR 466
RF+K +L I + +T Y+ LI+ G M G ++EA
Sbjct: 547 DAFRFSKEMLKKGIELNLVT------YNTLID---------------GLSMTGKLSEAED 585
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF-----VCHMFSVLAL 521
+ + +P+ YN LI + GNV + +Y+EM G H+ L
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCT 645
Query: 522 IKALYCDER-YNEMS 535
+ + ER + EMS
Sbjct: 646 KEGIELTERLFGEMS 660
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 168/389 (43%), Gaps = 45/389 (11%)
Query: 156 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 215
E P Y + I K ++GK LE+ M I+P V Y +LI LC +R+
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 216 EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 275
+A LF EML R + P TY+TL++ YC G K F +++ + PS
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM--------KADHIEPS 283
Query: 276 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 335
L+T+N L+ GL ++A +L+ M ++ PD ++S + G+
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS------------- 330
Query: 336 EMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL--RYQAQYL-PD 392
++ E + + +S VK N T S L+N C E K E A ++ R A+ L P+
Sbjct: 331 SNEKAEAALGVYETAVDSGVK--MNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 393 SVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVEL 451
V Y +++G +K R+ + + + P ++ Y+ LI + C E ++ +
Sbjct: 389 EVIYNTMIDGYCRKG-DLVGARMKIEAMEKQGMK-PDHLAYNCLIRRFCELGEMENAEKE 446
Query: 452 VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
V +++G+ P YN+LI + K +D+ KEM G
Sbjct: 447 VNKMKLKGV----------------SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGT 490
Query: 512 VCHMFSVLALIKALYCDERYNEMSWVIRN 540
+ ++ S LI L + E V R+
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRD 519
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 185/456 (40%), Gaps = 72/456 (15%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ ++ + + P++ Y I+ + V + + + M + P Y+ +I
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
CK K M A ++ EML + + P + Y LI C ++ + + M + P
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS------------------- 273
T++TL++ G ++ E+ GF+P T FS
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFT-FSILFDGYSSNEKAEAALGVY 342
Query: 274 ----PSLVTYNA-----LIHGLCFFQRPDEALEIL-RGMPEMLLDPDEVSYSAVISGFRR 323
S V NA L++ LC + ++A EIL R M + L+ P+EV Y+ +I G+ R
Sbjct: 343 ETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV-PNEVIYNTMIDGYCR 401
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA--- 380
+L A +K+E +K+ P +H ++ L+ +C + E A
Sbjct: 402 KGDLVGA-RMKIEAMEKQGMKP--------------DHLAYNCLIRRFCELGEMENAEKE 446
Query: 381 ---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILI 437
+KL+ + P +Y +L+ G +K F K + + T+P+ + Y LI
Sbjct: 447 VNKMKLKGVS---PSVETYNILIGGYGRKY--EFDKCFDILKEMEDNGTMPNVVSYGTLI 501
Query: 438 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 497
C L KG ++ EA + M R P+ +YN+LI C G +
Sbjct: 502 -NC----------LCKGSKLL----EAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 498 KAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 533
A+ KEML G ++ + LI L + +E
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSE 582
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 217/482 (45%), Gaps = 61/482 (12%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEK-NHNLSIPY 109
VS N ++ C EGR+ +A +QEM++ PD T+NTL++ C+A H + I
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
V + E Y P+ TY +I C V+EAV +L M + SP+ +Y+ +
Sbjct: 320 VMLQEGY--------DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
IS CK ++ +A E+ + KGI PDV + LIQ LC R A +LF+EM +G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P TY+ L+++ C KG+ + ++ ++ G + S++TYN LI G C
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG--------CARSVITYNTLIDGFCKA 483
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
+ EA EI M + + V+Y+ +I G + R + A +L +DQ
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL------------MDQM 531
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL----PDSVSYCLLLNGLHK 405
E D T++SL+ +C + A + QA PD V+Y L++GL K
Sbjct: 532 IMEGQKPD---KYTYNSLLTHFCRGGDIKKAADI-VQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 406 KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 465
A +LL S + I + A N +++G + EA
Sbjct: 588 AGRVEVASKLL-----------RSIQMKGINLTPHAYN------PVIQGLFRKRKTTEAI 630
Query: 466 RARDTMLHRNYRPEGAV-YNLLIFDHCIGGN-VHKAYDMYKEMLHYGFVCHMFSVLALIK 523
ML +N P AV Y ++ C GG + +A D E+L GFV S+ L +
Sbjct: 631 NLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAE 690
Query: 524 AL 525
L
Sbjct: 691 GL 692
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 211/469 (44%), Gaps = 52/469 (11%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
PD T+N LI A C A H L P + ++E M L P+E T+ +++ + +
Sbjct: 187 PDVSTFNVLIKALCRA---HQLR-PAILMLE---DMPSYGLVPDEKTFTTVMQGYIEEGD 239
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYG 202
++ A+ I M E G S S + I+ FCK + AL EM ++ G FPD + +
Sbjct: 240 LDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFN 299
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
L+ LC + A ++ ML G P TY++++ C GE + + D++I +
Sbjct: 300 TLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITR 359
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
SP+ VTYN LI LC + +EA E+ R + + PD +++++I G
Sbjct: 360 --------DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 323 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 382
R R A EL EM K C P + T++ L++ C++ K + AL
Sbjct: 412 LTRNHRVAMELFEEMRSK-GCEP--------------DEFTYNMLIDSLCSKGKLDEALN 456
Query: 383 LRYQAQY---LPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK 439
+ Q + ++Y L++G K +R A+ + + H ++ S + Y+ LI+
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF-DEMEVHGVSRNS-VTYNTLIDG 514
Query: 440 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 499
L K R V +AA+ D M+ +P+ YN L+ C GG++ KA
Sbjct: 515 -----------LCKSRR----VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKA 559
Query: 500 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRN-TLRSCNL 547
D+ + M G + + LI L R S ++R+ ++ NL
Sbjct: 560 ADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 137/519 (26%), Positives = 232/519 (44%), Gaps = 64/519 (12%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V FN ++ LC E R+ EA ++ M + P +T NTL++ C K + + R
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+VE Q PNE TY ++ + C + A+ +LR M E+ + A YS II
Sbjct: 219 MVETGFQ-------PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
CK+ + A + EM KG D+ Y LI C+ R + L ++M+ R +SP
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
T+ L++++ +G+ + L E++Q+G +P+ +TYN+LI G C R
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRG--------IAPNTITYNSLIDGFCKENR 383
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
+EA++++ M DPD ++++ +I+G+ + + EL EM
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-------------- 429
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKAT 408
SL ++N T+++LV +C K E+A KL + + PD VSY +LL+GL
Sbjct: 430 -SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG- 487
Query: 409 SRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARA 467
K L +F + IY I+I C ++ +L ++G V ARA
Sbjct: 488 -ELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG-VKLDARA 545
Query: 468 RDTML--------------------HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 507
+ M+ + P+ YN+LI H + A ++ +EM
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 508 HYGFVCHMFSVLALIKALYC---DERYNEMSWVIRNTLR 543
GF + +V +I L D+ + +M R +L+
Sbjct: 606 SSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRASLK 644
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 185/437 (42%), Gaps = 53/437 (12%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
V+L+ M P + + + E + + + M KG++ + S +I+
Sbjct: 73 VDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINC 132
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
FC+ +++ A +++ G PD + L+ LC + R+ EA +L M+ G P
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
T +TLV CL G+ S L D +++ G F P+ VTY +++ +C +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETG--------FQPNEVTYGPVLNVMCKSGQT 244
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK------------ 340
A+E+LR M E + D V YS +I G + L AF L EM+ K
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Query: 341 --ETCWPLDQDTNESLVKDL------SNHDTFSSLVNDYCAEDK---AEMALKLRYQAQY 389
C D L++D+ N TFS L++ + E K A+ LK Q
Sbjct: 305 IGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 390 LPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSV 448
P++++Y L++G K+ A +++ I C P + ++ILI C N
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGC--DPDIMTFNILINGYCKANRIDDG 422
Query: 449 VE-------------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 489
+E LV+GF G + A + M+ R RP+ Y +L+
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 490 HCIGGNVHKAYDMYKEM 506
C G + KA +++ ++
Sbjct: 483 LCDNGELEKALEIFGKI 499
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 122/280 (43%), Gaps = 54/280 (19%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+F+ +I EG++REA+ +L+EM P+ +TYN+LI
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG--------------- 377
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
FC NR+EEA+ ++ LM KG P +++ +I
Sbjct: 378 ---------------------------FCKENRLEEAIQMVDLMISKGCDPDIMTFNILI 410
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ +CK + LE+ EM +G+ + Y L+Q C +L A+ LFQEM+ R +
Sbjct: 411 NGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P +Y L++ C GE K + F + + Y +IHG+C
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEI--------FGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 330
+ D+A ++ +P + D +Y+ +IS R L KA
Sbjct: 523 KVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 134/532 (25%), Positives = 240/532 (45%), Gaps = 58/532 (10%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSI 107
E +V+ ++++ C RI EA ++ +M P+ VT+NTLI HN +
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL----HNKAS 203
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
+ +++ +M + P+ TY ++ C R + A +L M + L P Y+
Sbjct: 204 EAMALID---RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
II CK K M AL + EM KGI P+V Y LI LC+ R +A L +M+ R
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
++P T+ L++A+ +G+ + L DE++++ S PS+VTY++LI+G C
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR--------SIDPSIVTYSSLINGFC 372
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
R DEA ++ M PD V+Y+ +I GF + + + + E+ EM Q+
Sbjct: 373 MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL----- 427
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLH 404
+ N T++ L+ +MA K P+ ++Y LL+GL
Sbjct: 428 ----------VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNE 463
K + K +++F + P+ Y+I+IE C + + +L ++G+
Sbjct: 478 KNG--KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGV--- 532
Query: 464 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 523
+P+ YN +I C G+ +A ++KEM G + + LI+
Sbjct: 533 -------------KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579
Query: 524 ALYCDERYNEMSWVIRNTLRSCNL-NDSEQLKILDEIDPERCIIYALLDVLA 574
A D + +I+ +RSC D+ + ++ + + + + LD+L+
Sbjct: 580 ARLRDGDREASAELIKE-MRSCGFAGDASTIGLVTNMLHDGRLDKSFLDMLS 630
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 129/532 (24%), Positives = 225/532 (42%), Gaps = 67/532 (12%)
Query: 5 LRVSFTVA-TLKTFRIRGFAA-GKATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVI 62
+R+SF +A T K F R G A T VSP F +A + K + +
Sbjct: 1 MRISFAIASTAKRFVHRSLVVRGNAAT----VSPSF----SFFWRRAFSGKTSYDYREKL 52
Query: 63 KR-LCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYH 117
R E ++ +A + EM P + ++ L+SA + K + ++ L
Sbjct: 53 SRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNK-------FDVVISLGE 105
Query: 118 QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 177
QM + N TY +I FC R+++ A+ +L M + G P+ + S +++ +C +K
Sbjct: 106 QMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSK 165
Query: 178 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 237
+ +A+ + +M G P+ + LI L + EA L M+ +G P TY
Sbjct: 166 RISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYG 225
Query: 238 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 297
+V C +G+ F+L +++ Q P ++ YN +I GLC ++ D+AL
Sbjct: 226 VVVNGLCKRGDTDLAFNLLNKMEQ--------GKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 298 ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD 357
+ + M + P+ V+YS++IS A L +M +++ N +
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM--------IERKINPDVF-- 327
Query: 358 LSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKR 414
TFS+L++ + E K A KL + P V+Y L+NG AK+
Sbjct: 328 -----TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 415 LLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLH 473
+ F + HC P + Y+ LI+ C + +E+ + RGLV
Sbjct: 383 MFEFMVSKHCF--PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT--------- 431
Query: 474 RNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
YN+LI G+ A +++KEM+ G ++ + L+ L
Sbjct: 432 -------VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/546 (26%), Positives = 236/546 (43%), Gaps = 68/546 (12%)
Query: 55 LVSFNAVIKRLC--GE--GRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYV 110
L ++N I+ LC GE G +R ++++ PD +TYN LI C+ K
Sbjct: 251 LFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE------ 304
Query: 111 RIVELYHQMCVRE-LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
E+Y V E L P+ TY +I +C V+ A I+ G P +Y +
Sbjct: 305 --AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I C E +AL + E L KGI P+V Y LI+ L +Q +LEA L EM +G+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P +T++ LV C G S L +I KG+ P + T+N LIHG
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP--------DIFTFNILIHGYSTQ 474
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
+ + ALEIL M + +DPD +Y+++++G + + E M +K C P
Sbjct: 475 LKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK-GCAP---- 529
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKK 406
N TF+ L+ C K + AL L + + PD+V++ L++G K
Sbjct: 530 ----------NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 407 ATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAAR 466
A L A+ ++ S Y+I+I F + V A +
Sbjct: 580 GDLDGAYTLFRKMEEAYKVS-SSTPTYNIIIH---------------AFTEKLNVTMAEK 623
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
M+ R P+G Y L++ C GNV+ Y EM+ GF+ + ++ +I L
Sbjct: 624 LFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLC 683
Query: 527 CDERYNEMSWVIRNTLRS----------CNLNDSEQLK---ILDEIDPERCIIYALLDVL 573
++R E + +I ++ C+++ E +L+++ + CI Y ++L
Sbjct: 684 VEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDLLKKSCITYYAYELL 743
Query: 574 AEKAMD 579
+ D
Sbjct: 744 FDGLRD 749
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 212/472 (44%), Gaps = 47/472 (9%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
L ++ +VI++L G+ E VL +M + V + L A KN+ V
Sbjct: 40 LSTYRSVIEKLGYYGKFEAMEEVLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVN 97
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
++ +M + P +Y ++ + D ++A + M ++G++P S++ + FC
Sbjct: 98 VFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFC 157
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K AL + M +G +V AY ++ + E +LF +ML G+S
Sbjct: 158 KTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLS 217
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
T++ L+ C KG+ + L D+VI++G L P+L TYN I GLC D
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVL--------PNLFTYNLFIQGLCQRGELDG 269
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
A+ ++ + E PD ++Y+ +I G + + ++A E+ L + NE L
Sbjct: 270 AVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA-EVY-----------LGKMVNEGL 317
Query: 355 VKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGL-HKKATSR 410
D T+++L+ YC ++A ++ A ++PD +Y L++GL H+ T+R
Sbjct: 318 EPD---SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDT 470
L LF P+ I+Y+ LI KG +G++ EAA+ +
Sbjct: 375 ---ALALFNEALGKGIKPNVILYNTLI---------------KGLSNQGMILEAAQLANE 416
Query: 471 MLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI 522
M + PE +N+L+ C G V A + K M+ G+ +F+ LI
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 165/358 (46%), Gaps = 37/358 (10%)
Query: 45 AAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAE 100
A GK ++ +N +IK L +G I EA + EM++ P+ T+N L++ C+
Sbjct: 382 ALGKGIKPNVIL-YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 101 KNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS 160
+ L M + P+ T+ +I + + ++E A+ IL +M + G+
Sbjct: 441 CVSDAD-------GLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 161 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 220
P +Y+ +++ CK + +E M++KG P++ + +L++ LC R+L EA L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 221 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 280
+EM + ++P T+ TL++ +C G+ + L +K Y V+S +P TYN
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL----FRKMEEAYKVSSSTP---TYN 606
Query: 281 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+IH A ++ + M + L PD +Y ++ GF + + ++ LEM +
Sbjct: 607 IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMEN 666
Query: 341 ETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY---QAQYLPDSVS 395
+ L+ T ++N C ED+ A + + Q +P++V+
Sbjct: 667 ------------GFIPSLT---TLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/477 (26%), Positives = 221/477 (46%), Gaps = 55/477 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEA-EKNHNLSIPY 109
++ +I+ C G+ R+A +L+ + PD +TYN +IS C+A E N+ LS+
Sbjct: 137 IIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV-- 194
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
+M V SP+ TY ++R CD ++++A+ +L M ++ P +Y+ +
Sbjct: 195 ------LDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTIL 245
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I C++ +G A+++ EM D+G PDV Y +L+ +C + RL EA +M G
Sbjct: 246 IEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P T++ ++ + C G + L ++++KG FSPS+VT+N LI+ LC
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG--------FSPSVVTFNILINFLCRK 357
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
A++IL MP+ P+ +SY+ ++ GF + +++ +A E LE C+P
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY-LERMVSRGCYP---- 412
Query: 350 TNESLVKDLSNHDT-FSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKAT 408
D+ ++T ++L D ED E+ +L + P ++Y +++GL K
Sbjct: 413 -------DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS-PVLITYNTVIDGLAKAGK 464
Query: 409 SRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARAR 468
+ A + LL + A L P I Y LV G G V+EA +
Sbjct: 465 TGKAIK-LLDEMRAKDLK-PDTITYS---------------SLVGGLSREGKVDEAIKFF 507
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
RP +N ++ C +A D M++ G + S LI+ L
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 162/333 (48%), Gaps = 34/333 (10%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++N ++ +C EGR+ EA L +M P+ +T+N ++ + C + ++
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR-------WM 326
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+L M + SP+ T+ +I C + + A+ IL M + G P++ SY+ ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
FCK K+M +A+E M+ +G +PD+ Y ++ LC ++ +A ++ ++ +G S
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY+T+++ G+ K L DE+ K P +TY++L+ GL
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK--------DLKPDTITYSSLVGGLSREG 498
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
+ DEA++ M + P+ V++++++ G + R+ +A + + M + C P
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKP----- 552
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
N +++ L+ E A+ AL+L
Sbjct: 553 ---------NETSYTILIEGLAYEGMAKEALEL 576
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 97/179 (54%), Gaps = 11/179 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNHNLSIPYV 110
+V++N ++ LC +G++ +A +L +++ C +TYNT+I +A K
Sbjct: 414 IVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTG------- 466
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ ++L +M ++L P+ TY ++ +V+EA+ G+ P+A +++ I+
Sbjct: 467 KAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
CK+++ +A++ V M+++G P+ +Y +LI+ L ++ EA +L E+ +G+
Sbjct: 527 LGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/470 (21%), Positives = 182/470 (38%), Gaps = 77/470 (16%)
Query: 135 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 194
+R +EE L M G P + +I FC+ + KA ++ + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 195 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 254
PDV Y ++I C + A + M +SP TY+T++ + C G+ +
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 255 LQDEVIQKGFLPYYVT---------------------------SFSPSLVTYNALIHGLC 287
+ D ++Q+ P +T +P +VTYN L++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
R DEA++ L MP P+ ++++ ++ A +L +M L
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM--------LR 337
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLH 404
+ + S+V TF+ L+N C + +A L+ Q P+S+SY LL+G
Sbjct: 338 KGFSPSVV-------TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFC 390
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVEL------------ 451
K+ A L + C P + Y+ ++ C + + + VE+
Sbjct: 391 KEKKMDRAIEYLERMVSRGCY--PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 452 -------VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYK 504
+ G G +A + D M ++ +P+ Y+ L+ G V +A +
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 505 EMLHYGFVCHMFS----VLALIKALYCDERYNEMSWVIRNTLRSCNLNDS 550
E G + + +L L K+ D + + ++I R C N++
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN---RGCKPNET 555
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+S+N ++ C E ++ A L+ M PD VTYNT+++A C+ K +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED------- 432
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
VE+ +Q+ + SP TY +I + +A+ +L M K L P +YS ++
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ ++ +A++ E GI P+ + ++ LC R+ A D M+ RG P
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKP 552
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
+Y L+E +G + L +E+ KG +
Sbjct: 553 NETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 193/403 (47%), Gaps = 40/403 (9%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
E +V+ N+++ C RI +A ++ +M + PD VT+ TLI HN +
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL----HNKAS 200
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
V +++ +M R P+ TY ++ C R + A+ +L M + + YS
Sbjct: 201 EAVALID---RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYS 257
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+I CK + AL + EM +KG+ P+V Y LI LC+ R +A L +M+ R
Sbjct: 258 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER 317
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
++P T+ L++A+ KG+ K L +E+I++ S P++ TY++LI+G C
Sbjct: 318 KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKR--------SIDPNIFTYSSLINGFC 369
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
R EA ++L M P+ V+Y+ +I+GF + + + K EL EM Q+
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL----- 424
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLH 404
+ N T+++L++ + D A+M K P+ ++Y +LL+GL
Sbjct: 425 ----------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 474
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFK 446
K + AK +++F + P Y+I+IE C ++K
Sbjct: 475 KNG--KLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 176/424 (41%), Gaps = 47/424 (11%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ L+ M P+ + ++ N+ + + M G+S + +Y+ +I+
Sbjct: 63 IGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINC 122
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
FC+ + AL + +M+ G PD+ L+ CH R+ +A L +M+ G P
Sbjct: 123 FCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPD 182
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
T+ TL+ L + S+ L D ++Q+G P LVTY A+++GLC
Sbjct: 183 TVTFTTLIHGLFLHNKASEAVALIDRMVQRG--------CQPDLVTYGAVVNGLCKRGDT 234
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
D AL +L M ++ + V YS VI + R A L EM+ K
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV---------- 284
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATS 409
N T+SSL++ C + A +L + + P+ V++ L++ KK
Sbjct: 285 -----RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 469
A++L Y+ +I++ + + L+ GF M + EA + +
Sbjct: 340 VKAEKL-----------------YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 470 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY--- 526
M+ ++ P YN LI C V K ++++EM G V + + LI +
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 527 -CDE 529
CD
Sbjct: 443 DCDN 446
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 188/446 (42%), Gaps = 69/446 (15%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P + ++ L+SA + K + ++ +M + +S N TY +I FC +R
Sbjct: 76 PSIIEFSKLLSAIAKMNK-------FDLVISFGEKMEILGISHNLYTYNILINCFCRCSR 128
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ A+ +L M + G P + + +++ FC + A+ + +M++ G PD +
Sbjct: 129 LSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTT 188
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV---- 259
LI L + EA L M+ RG P TY +V C +G+ +L +++
Sbjct: 189 LIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAK 248
Query: 260 IQKGFLPYYVT-----------------------SFSPSLVTYNALIHGLCFFQRPDEAL 296
I+ + Y P+++TY++LI LC + R +A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 297 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 356
+L M E ++P+ V++SA+I F + +L KA +L EM ++ +D
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS----ID--------- 355
Query: 357 DLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAK 413
N T+SSL+N +C D+ A+ L+L + LP+ V+Y L+NG K R K
Sbjct: 356 --PNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK--AKRVDK 411
Query: 414 RLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLH 473
+ LF ++ + + + Y LI GF + A M+
Sbjct: 412 GMELFREMSQRGLVGNTVTYTTLIH---------------GFFQARDCDNAQMVFKQMVS 456
Query: 474 RNYRPEGAVYNLLIFDHCIGGNVHKA 499
P YN+L+ C G + KA
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKA 482
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/471 (25%), Positives = 215/471 (45%), Gaps = 56/471 (11%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNH 103
K E +V+ ++++ C RI +A ++ +M + PD +T+ TLI H
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL----H 203
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
N + V +V+ +M R PN TY ++ C R ++ A +L M + +
Sbjct: 204 NKASEAVALVD---RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANV 260
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
YS +I CK + AL + EM +KG+ P+V Y LI LC+ R +A L +
Sbjct: 261 VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSD 320
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M+ R ++P T++ L++A+ +G+ + L DE+I++ S P + TY++LI
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR--------SIDPDIFTYSSLI 372
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
+G C R DEA + M P+ V+Y+ +I+GF + + + + EL EM Q+
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL- 431
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLL 400
+ N T+++L++ + D A+M K P+ ++Y LL
Sbjct: 432 --------------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 401 NGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRG 459
+GL K + K +++F + P+ Y+I+IE C + + +L ++G
Sbjct: 478 DGLCKNG--KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 535
Query: 460 LVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
+ +P+ +YN +I C G +A ++++M G
Sbjct: 536 V----------------KPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 201/470 (42%), Gaps = 74/470 (15%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P +N L+SA + +K + ++ L +M +S N TY +I FC R++
Sbjct: 83 PSIFEFNKLLSAIAKMKK-------FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 135
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ A+ +L M + G P + S +++ +C K + A+ + +M++ G PD +
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV---- 259
LI L + EA L M+ RG P TY +V C +G+ F+L +++
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 255
Query: 260 IQKGFLPYYVT-----------------------SFSPSLVTYNALIHGLCFFQRPDEAL 296
I+ + Y P+++TY++LI LC ++R +A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 297 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 356
+L M E ++P+ V+++A+I F + +L +A +L EM ++ +D D
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS----IDPDIF----- 366
Query: 357 DLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAK 413
T+SSL+N +C D+ A+ +L P+ V+Y L+NG K R +
Sbjct: 367 ------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK--AKRIDE 418
Query: 414 RLLLFYIVAHCLTIPSYIIYDILIE------KCANNE--FKSVVE------------LVK 453
+ LF ++ + + + Y LI C N + FK +V L+
Sbjct: 419 GVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 454 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
G G + +A + + P YN++I C G V +D++
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 528
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 184/428 (42%), Gaps = 48/428 (11%)
Query: 122 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 181
R S YR ++R ++++A+G+ M + P +++++S K K+
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
+ + +M GI +++ Y +LI C + ++ A L +M+ G P T +L+
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 301
YC S L D++++ G + P +T+ LIHGL + EA+ ++
Sbjct: 164 GYCHGKRISDAVALVDQMVEMG--------YRPDTITFTTLIHGLFLHNKASEAVALVDR 215
Query: 302 MPEMLLDPDEVSYSAVISGFRRIRELRKAFEL--KLEMDQKET------------CWPLD 347
M + P+ V+Y V++G + ++ AF L K+E + E C
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 348 QDTNESLVKDLSNHD------TFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCL 398
+D +L ++ N T+SSL++ C ++ A +L + + P+ V++
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 399 LLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMR 458
L++ K+ A++L YD +I++ + + + L+ GF M
Sbjct: 336 LIDAFVKEGKLVEAEKL-----------------YDEMIKRSIDPDIFTYSSLINGFCMH 378
Query: 459 GLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSV 518
++EA + M+ ++ P YN LI C + + ++++EM G V + +
Sbjct: 379 DRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Query: 519 LALIKALY 526
LI +
Sbjct: 439 TTLIHGFF 446
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 112/223 (50%), Gaps = 11/223 (4%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNH 103
K + + + +++++I C R+ EA+ + + M DC VTYNTLI+ C+A++
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
VEL+ +M R L N TY +I F + A + + M G+ P+
Sbjct: 418 -------EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
+Y+ ++ CKN ++ KA+ + + + P ++ Y ++I+ +C ++ + DLF
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
+ L+G+ P Y+T++ +C KG + L ++ + G LP
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 132/526 (25%), Positives = 218/526 (41%), Gaps = 78/526 (14%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
L S+N +I C ++ A VL +M +PD VT ++L++ C ++
Sbjct: 115 LYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKR-------IS 167
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
V L QM V E PN T+ +I N+ EAV ++ M +G P +Y ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ CK ++ AL + +M I DV Y +I LC+ + + +A +LF EM +G+
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIR 287
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-------------------- 270
P TY++L+ C G +S L ++I++ P VT
Sbjct: 288 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 347
Query: 271 -------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
S P + TY++LI+G C R DEA + M P+ V+Y+ +I GF +
Sbjct: 348 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
+ + + EL EM Q+ + N T+++L+ +MA K+
Sbjct: 408 AKRVEEGMELFREMSQRGL---------------VGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 384 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK- 439
PD ++Y +LL+GL K + K L++F + P Y+I+IE
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYG--KLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 440 CANNEFKSVVEL-------------------VKGFRMRGLVNEAARARDTMLHRNYRPEG 480
C + + +L + GF +GL EA M P
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 481 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
YN LI G+ + ++ KEM GFV ++ +I L+
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 616
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 180/414 (43%), Gaps = 37/414 (8%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
V+L+ +M P+ + ++ N+ + + + M +S SY+ +I+
Sbjct: 65 VDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINC 124
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
FC+ ++ AL + +M+ G PD+ L+ CH +R+ EA L +M + P
Sbjct: 125 FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
T++TL+ L + S+ L D ++ +G P L TY +++GLC
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVARG--------CQPDLFTYGTVVNGLCKRGDI 236
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
D AL +L+ M + ++ D V Y+ +I + + A L EMD K P + T
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK-GIRP-NVVTYN 294
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
SL++ L N+ +S A L + + P+ V++ L++ K+ A
Sbjct: 295 SLIRCLCNYGRWSD----------ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 413 KRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 472
++L YD +I++ + + + L+ GF M ++EA + M+
Sbjct: 345 EKL-----------------YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
++ P YN LI C V + ++++EM G V + + LI+ L+
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF 441
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/497 (24%), Positives = 228/497 (45%), Gaps = 64/497 (12%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN +IK L EG++ EA ++ M + PD VTYN++++ C ++ + S+
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC---RSGDTSLA---- 212
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
++L +M R + + TY +I C ++ A+ + + M KG+ +Y+ ++
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
CK + + +M+ + I P+V + +L+ + + +L EA +L++EM+ RG+SP
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
TY+TL++ YC++ S+ ++ D +++ SP +VT+ +LI G C +R
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVR--------NKCSPDIVTFTSLIKGYCMVKRV 384
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
D+ +++ R + + L + V+YS ++ GF + +++ A EL EM +
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM------------VSH 432
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLP---DSVSYCLLLNGLHKKATS 409
++ D+ T+ L++ C K E AL++ Q V Y ++ G+ K
Sbjct: 433 GVLPDVM---TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 410 RFAKRLLLFYIVAHCLTI-PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARAR 468
A L + C + P+ + Y ++I G +G ++EA
Sbjct: 490 EDAWNL---FCSLPCKGVKPNVMTYTVMIS---------------GLCKKGSLSEANILL 531
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD 528
M P YN LI H G++ + + +EM GF S+ +I L
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML--- 588
Query: 529 ERYNEMSWVIRNTLRSC 545
+S + R TLR C
Sbjct: 589 -----LSAMKRLTLRYC 600
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 145/289 (50%), Gaps = 19/289 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++N++++ LC G+ + +L++M P+ +T+N L+ + K +
Sbjct: 263 VVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN---- 318
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
ELY +M R +SPN TY ++ +C +NR+ EA +L LM SP +++ +I
Sbjct: 319 ---ELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+C K + +++ + +G+ + Y +L+Q C ++ A +LFQEM+ G+
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY L++ C G+ K + ++ +QK + +V Y +I G+C
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFED-LQK-------SKMDLGIVMYTTIIEGMCKGG 487
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 339
+ ++A + +P + P+ ++Y+ +ISG + L +A L +M++
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/472 (21%), Positives = 197/472 (41%), Gaps = 60/472 (12%)
Query: 73 EAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNE 128
+A + QEM P V ++ SA K NL + + + +EL ++ N
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIART-KQFNLVLDFCKQLEL------NGIAHNI 123
Query: 129 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 188
T MI FC + A +L + + G P +++ +I ++ +A+ +
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 248
M++ G PDV Y ++ +C A DL ++M R + TY T++++ C G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 249 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 308
L E+ KG S+VTYN+L+ GLC + ++ +L+ M +
Sbjct: 244 IDAAISLFKEMETKG--------IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 309 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS-NHDTFSSL 367
P+ ++++ ++ F + +L++A EL EM + + +S N T+++L
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEM----------------ITRGISPNIITYNTL 339
Query: 368 VNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHC 424
++ YC +++ A L L + + PD V++ L+ G R + +F ++
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC--MVKRVDDGMKVFRNISKR 397
Query: 425 LTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYN 484
+ + + Y I LV+GF G + A M+ P+ Y
Sbjct: 398 GLVANAVTYSI---------------LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442
Query: 485 LLIFDHCIGGNVHKAY----DMYKEMLHYGFVCHMFSVLALIKALYCDERYN 532
+L+ C G + KA D+ K + G V + + + K ++ +N
Sbjct: 443 ILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWN 494
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 174/407 (42%), Gaps = 49/407 (12%)
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
++A+ + + M P +SR S + K+ L+ ++ GI +++ ++
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
I C + A + +++ G P T++TL++ L+G+ S+ L D +++ G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENG- 188
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
P +VTYN++++G+C AL++LR M E + D +YS +I R
Sbjct: 189 -------CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 325 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMAL 381
+ A L EM+ K S+V T++SLV C K + L
Sbjct: 242 GCIDAAISLFKEMETK--------GIKSSVV-------TYNSLVRGLCKAGKWNDGALLL 286
Query: 382 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-C 440
K + +P+ +++ +LL+ K+ + A L I P+ I Y+ L++ C
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG--ISPNIITYNTLMDGYC 344
Query: 441 -------ANN------------EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 481
ANN + + L+KG+ M V++ + + R
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV 404
Query: 482 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD 528
Y++L+ C G + A ++++EM+ +G + + + L+ L CD
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL-CD 450
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 195/404 (48%), Gaps = 38/404 (9%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+ +FN VI LC G++ +A V+++M P+ V+YNTLI C+ N +
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM----Y 278
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ + +M ++SPN TT+ +I F + + ++ + + M ++ + P+ SY+ +I
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ C ++ +A+ M+ +M+ G+ P++ Y LI C L EA D+F + +G
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P R Y+ L++AYC G+ F L++E+ ++G + P + TYN LI GLC
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV--------PDVGTYNCLIAGLCRNG 450
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
+ A ++ + L PD V++ ++ G+ R E RKA L EM K P
Sbjct: 451 NIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEM-SKMGLKP----- 503
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ----YLPDSVSYCLLLNGLHKK 406
H T++ ++ YC E + A +R Q + + SY +LL G +K
Sbjct: 504 ---------RHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554
Query: 407 ATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE 450
A +LL ++ L +P+ I Y+I+ E+ + F +E
Sbjct: 555 GKLEDA-NMLLNEMLEKGL-VPNRITYEIVKEEMVDQGFVPDIE 596
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 193/419 (46%), Gaps = 51/419 (12%)
Query: 100 EKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL 159
++N + + YV Y +M R++ PN T+ +I C ++ +A ++ M G
Sbjct: 200 KENRSADVEYV-----YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGC 254
Query: 160 SPHADSYSRIISRFCK---NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 216
SP+ SY+ +I +CK N +M KA + EM++ + P++ + +LI L
Sbjct: 255 SPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG 314
Query: 217 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 276
+ +F+EML + + P +Y++L+ C G+ S+ ++D+++ G P+L
Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG--------VQPNL 366
Query: 277 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 336
+TYNALI+G C EAL++ + P Y+ +I + ++ ++ F LK E
Sbjct: 367 ITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Query: 337 MDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ--AQYLPDSV 394
M++ E +V D+ T++ L+ C E A KL Q ++ LPD V
Sbjct: 427 MER------------EGIVPDVG---TYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLV 471
Query: 395 SYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKG 454
++ +L+ G +K SR K +L ++ P ++ Y+I++ KG
Sbjct: 472 TFHILMEGYCRKGESR--KAAMLLKEMSKMGLKPRHLTYNIVM---------------KG 514
Query: 455 FRMRGLVNEAARARDTM-LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
+ G + A R M R R A YN+L+ + G + A + EML G V
Sbjct: 515 YCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLV 573
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 141/315 (44%), Gaps = 47/315 (14%)
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
L+I LL + R + +++EM+ R + P T++ ++ A C G+ +K + +++
Sbjct: 194 LMIALL-KENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM--- 249
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFF---QRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
V SP++V+YN LI G C + +A +L+ M E + P+ +++ +I
Sbjct: 250 -----KVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILID 304
Query: 320 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEM 379
GF + L + ++ EM LDQD +++ +++SL+N C K
Sbjct: 305 GFWKDDNLPGSMKVFKEM--------LDQDVKPNVI-------SYNSLINGLCNGGKISE 349
Query: 380 ALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDIL 436
A+ +R A P+ ++Y L+NG K + A L +F V +P+ +Y++L
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA--LDMFGSVKGQGAVPTTRMYNML 407
Query: 437 IEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNV 496
I+ + G +++ ++ M P+ YN LI C GN+
Sbjct: 408 ID---------------AYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 497 HKAYDMYKEMLHYGF 511
A ++ ++ G
Sbjct: 453 EAAKKLFDQLTSKGL 467
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 26/151 (17%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
LV+F+ +++ C +G R+A +L+EM+ P +TYN ++ C K NL
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYC---KEGNLKAATN 526
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++ + R L N +Y +++ + + ++E+A +L M EKGL P+ +Y +
Sbjct: 527 MRTQMEKE---RRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV- 582
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
K EM+D+G PD+ +
Sbjct: 583 ---------------KEEMVDQGFVPDIEGH 598
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 224/508 (44%), Gaps = 54/508 (10%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
PD TYN LI+ C+ K V + + L PN +Y +I+ +C
Sbjct: 343 PDVATYNILINRLCKEGKKE-------VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ A +L MAE+G P +Y +I + M A+ MKV+++D+G+ PD Y +
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS---KVFHLQDEVI 260
L+ LC R L A+ LF EML R + P Y TL++ + G+F KVF L +
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLS---V 512
Query: 261 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
+KG +V +NA+I G C DEAL + M E L PD+ +YS +I G
Sbjct: 513 EKG--------VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 321 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 380
+ + +++ A ++ M +K C P N T++SL+N +C + +MA
Sbjct: 565 YVKQQDMATAIKIFRYM-EKNKCKP--------------NVVTYTSLINGFCCQGDFKMA 609
Query: 381 LKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILI 437
+ + Q +P+ V+Y L+ L K+ +S K + + ++ +P+ + ++ L+
Sbjct: 610 EETFKEMQLRDLVPNVVTYTTLIRSLAKE-SSTLEKAVYYWELMMTNKCVPNEVTFNCLL 668
Query: 438 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 497
+ V+ G G + + M + A YN + C+ G V
Sbjct: 669 QGFVKKTSGKVLAEPDGSN-HGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVK 727
Query: 498 KAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDS------E 551
A +M+ GF S A++ +C N W RN + CNL +
Sbjct: 728 TACMFQDKMVKKGFSPDPVSFAAILHG-FC-VVGNSKQW--RN-MDFCNLGEKGLEVAVR 782
Query: 552 QLKILDEIDPERCIIYA--LLDVLAEKA 577
++L++ P+ I A +L + EKA
Sbjct: 783 YSQVLEQHLPQPVICEASTILHAMVEKA 810
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 200/480 (41%), Gaps = 60/480 (12%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
PD + N+L+S ++ + + ++Y +MC R S + + +++ C+ +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDAR-------KVYDEMCDRGDSVDNYSTCILVKGMCNEGK 220
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
VE ++ KG P+ Y+ II +CK ++ A + E+ KG P + +G
Sbjct: 221 VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGT 280
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
+I C + + + L E+ RG+ + +++A G + D G
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG------YKVDPAESIG 334
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
++ P + TYN LI+ LC + + A+ L + L P+ +SY+ +I + +
Sbjct: 335 WI--IANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCK 392
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL--SNHDTFSSLVNDYCAEDKAEMAL 381
+E A +L L+M ++ C P D T L+ L S H +D M +
Sbjct: 393 SKEYDIASKLLLQMAER-GCKP-DIVTYGILIHGLVVSGH-----------MDDAVNMKV 439
Query: 382 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC- 440
KL + PD+ Y +L++GL K T RF LLF + +P +Y LI+
Sbjct: 440 KLIDRG-VSPDAAIYNMLMSGLCK--TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 441 -------ANNEFKSVVE------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGA 481
A F VE ++KGF G+++EA + M + P+
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Query: 482 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYC-------DERYNEM 534
Y+ +I + ++ A +++ M ++ + +LI C +E + EM
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 121/495 (24%), Positives = 226/495 (45%), Gaps = 55/495 (11%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
++F+ +I LC EGR+ EA ++ M + PD +T NTL++ C + K + +
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+VE Q PN TY ++ + C + A+ +LR M E+ + A YS II
Sbjct: 219 MVEYGCQ-------PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 271
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
CK+ + A + EM KGI ++ Y +LI C+ R + L ++M+ R ++P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
T+ L++++ +G+ + L E+I +G +P +TY +LI G C
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRG--------IAPDTITYTSLIDGFCKENH 383
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
D+A +++ M DP+ +++ +I+G+ + + EL +M
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM-------------- 429
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGL----- 403
SL +++ T+++L+ +C K +A +L + + P+ V+Y +LL+GL
Sbjct: 430 -SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGE 488
Query: 404 HKKATSRFAK--------RLLLFYIVAHCLTIPSYI--IYDILIE---KCANNEFKSVVE 450
+KA F K + ++ I+ H + S + +D+ K K+
Sbjct: 489 SEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNI 548
Query: 451 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
++ G +G ++EA M + P+G YN+LI H G+ K+ + +E+ G
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 511 FVCHMFSVLALIKAL 525
F ++ +I L
Sbjct: 609 FSVDASTIKMVIDML 623
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 240/518 (46%), Gaps = 61/518 (11%)
Query: 83 DPDCVTYNTLISAAC-EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 141
+P+ +T++TLI+ C E + L + R+VE+ H+ P+ T ++ C
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALEL-VDRMVEMGHK-------PDLITINTLVNGLCLS 206
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
+ EA+ ++ M E G P+A +Y +++ CK+ + A+E+ +M ++ I D Y
Sbjct: 207 GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
++I LC L A +LF EM ++G++ TY+ L+ +C G + L ++I+
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
+ +P++VT++ LI + EA E+ + M + PD ++Y+++I GF
Sbjct: 327 R--------KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 322 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 381
+ L KA ++ +++ + C P N TF+ L+N YC ++ + L
Sbjct: 379 CKENHLDKANQM-VDLMVSKGCDP--------------NIRTFNILINGYCKANRIDDGL 423
Query: 382 KLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIE 438
+L + + D+V+Y L+ G + AK LF + P+ + Y IL++
Sbjct: 424 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE--LFQEMVSRKVPPNIVTYKILLD 481
Query: 439 K-CANNEFKSVVELVKGFR--------------MRGLVNEAARARD------TMLHRNYR 477
C N E + +E+ + + G+ N A++ D ++ + +
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN-ASKVDDAWDLFCSLPLKGVK 540
Query: 478 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWV 537
P YN++I C G + +A ++++M G ++ LI+A D + +
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 538 IRNTLRSCNLN-DSEQLKILDEIDPERCIIYALLDVLA 574
I L+ C + D+ +K++ ++ + + + LD+L+
Sbjct: 601 IEE-LKRCGFSVDASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 193/480 (40%), Gaps = 86/480 (17%)
Query: 126 PNETTYRC--MIRLFCDRN--------------RVEEAVGILRLMAEKGLSPHADSYSRI 169
PNE ++ C F DRN + ++A+ + R M P +SR+
Sbjct: 35 PNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRL 94
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
S K K+ L + +M KGI +++ ++I C R+L A +++ G
Sbjct: 95 FSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY 154
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------------- 270
P T+ TL+ CL+G S+ L D +++ G P +T
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 271 --------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
P+ VTY +++ +C + A+E+LR M E + D V YS +I G
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 323 RIRELRKAFELKLEMDQKET--------------CWPLDQDTNESLVKDL------SNHD 362
+ L AF L EM+ K C D L++D+ N
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 363 TFSSLVNDYCAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLHKKATSRFAKRLLLFY 419
TFS L++ + E K A +L + + PD+++Y L++G K+ A +++
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 420 IVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 478
+ C P+ ++ILI C N +EL + +RG+V +
Sbjct: 395 VSKGC--DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT-------------- 438
Query: 479 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVI 538
YN LI C G ++ A ++++EM+ ++ + L+ L CD +E + I
Sbjct: 439 --VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL-CDNGESEKALEI 495
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 154/341 (45%), Gaps = 35/341 (10%)
Query: 38 NVLIPGFA-AG-------------KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD 83
N+LI GF AG K +V+F+ +I EG++REAE + +EM
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Query: 84 ----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFC 139
PD +TY +LI C ++NH + ++ M + PN T+ +I +C
Sbjct: 362 RGIAPDTITYTSLIDGFC--KENH-----LDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 140 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 199
NR+++ + + R M+ +G+ +Y+ +I FC+ ++ A E+ EM+ + + P++
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
Y +L+ LC +A ++F+++ M Y+ ++ C + + L
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL---- 530
Query: 260 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
F + P + TYN +I GLC EA + R M E PD +Y+ +I
Sbjct: 531 ----FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Query: 320 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
+ K+ +L E+ K + +D T + ++ LS+
Sbjct: 587 AHLGDGDATKSVKLIEEL--KRCGFSVDASTIKMVIDMLSD 625
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 170/359 (47%), Gaps = 37/359 (10%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
FN ++ + C EG I +A+ V E+T P V++NTLI+ C K NL +
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC---KVGNLDEGF---- 295
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
L HQM P+ TY +I C N+++ A G+ M ++GL P+ ++ +I
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+N E+ E +ML KG+ PD+ Y L+ C L+ AR++ M+ RG+ P
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
TY TL++ +C G+ ++ E+ Q G V ++AL+ G+C R
Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNG--------IELDRVGFSALVCGMCKEGRVI 467
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
+A LR M + PD+V+Y+ ++ F + + + F+L EM Q + P S
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM-QSDGHVP-------S 519
Query: 354 LVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATS 409
+V T++ L+N C + A+M L +PD ++Y LL G H+ A S
Sbjct: 520 VV-------TYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 178/422 (42%), Gaps = 48/422 (11%)
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
P I Y ++ N + ++ FC + +A + + ++ L P S++
Sbjct: 220 PTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFN 279
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+I+ +CK + + +K +M PDV Y LI LC + ++ A LF EM R
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G+ P + TL+ + GE + +++ KG P +V YN L++G C
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG--------LQPDIVLYNTLVNGFC 391
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
A I+ GM L PD+++Y+ +I GF R ++ A E++ EMDQ LD
Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI--ELD 449
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLH 404
+ FS+LV C E + AE AL+ +A PD V+Y ++++
Sbjct: 450 R-------------VGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
Query: 405 KKATSRFAKRLLL-FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNE 463
KK ++ +LL H +PS + Y++L+ G G +
Sbjct: 497 KKGDAQTGFKLLKEMQSDGH---VPSVVTYNVLLN---------------GLCKLGQMKN 538
Query: 464 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 523
A D ML+ P+ YN L+ H N K Y E+ G V + S +++
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI---GIVADLASYKSIVN 595
Query: 524 AL 525
L
Sbjct: 596 EL 597
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 149/322 (46%), Gaps = 40/322 (12%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEK-- 101
K + + +VSFN +I C G + E + +M T PD TY+ LI+A C+ K
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 102 -NHNL------------SIPYVRIV-------------ELYHQMCVRELSPNETTYRCMI 135
H L + + ++ E Y +M + L P+ Y ++
Sbjct: 328 GAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLV 387
Query: 136 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 195
FC + A I+ M +GL P +Y+ +I FC+ ++ ALE++ EM GI
Sbjct: 388 NGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIE 447
Query: 196 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 255
D + L+ +C + R+++A +EML G+ P TY +++A+C KG+ F L
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKL 507
Query: 256 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 315
E+ G + PS+VTYN L++GLC + A +L M + + PD+++Y+
Sbjct: 508 LKEMQSDGHV--------PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYN 559
Query: 316 AVISGFRRIRELRKAFELKLEM 337
++ G R K + K E+
Sbjct: 560 TLLEGHHRHANSSKRYIQKPEI 581
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 35/277 (12%)
Query: 271 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 330
F ++ +N L++ C +A ++ + + L P VS++ +I+G+ ++ L +
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 331 FELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQA 387
F LK +M++ T + T+S+L+N C E+K + A L +
Sbjct: 295 FRLKHQMEKSRT---------------RPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339
Query: 388 QYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKS 447
+P+ V + L++G + K Y ++ K +
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKE-----------------SYQKMLSKGLQPDIVL 382
Query: 448 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 507
LV GF G + A D M+ R RP+ Y LI C GG+V A ++ KEM
Sbjct: 383 YNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 508 HYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRS 544
G AL+ + + R + +R LR+
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/536 (24%), Positives = 230/536 (42%), Gaps = 68/536 (12%)
Query: 43 GFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKN 102
GF G ++ + ++ LC G AE + ++ I ++
Sbjct: 190 GFVVG-------MIDYRTIVNALCKNGYTEAAEMFMSKILK---------IGFVLDSHIG 233
Query: 103 HNLSIPYVRIVELYHQMCVREL-------SPNETTYRCMIRLFCDRNRVEEAVGILRLMA 155
+L + + R + L + V ++ +PN +Y +I C+ R+EEA G+ M
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 156 EKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLL 215
EKG P +Y+ +I C + KA + EM+ +G P+VH Y +LI LC ++
Sbjct: 294 EKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIE 353
Query: 216 EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 275
EA + ++M+ + P TY+ L+ YC G F L V++K + P+
Sbjct: 354 EANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL-TVMEK-------RACKPN 405
Query: 276 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 335
+ T+N L+ GLC +P +A+ +L+ M + L PD VSY+ +I G R + A++L
Sbjct: 406 VRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLS 465
Query: 336 EMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPD 392
M+ C+ ++ D TF++++N +C + KA++A L L + D
Sbjct: 466 SMN----CFDIEPDCL-----------TFTAIINAFCKQGKADVASAFLGLMLRKGISLD 510
Query: 393 SVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSY--IIYDILIEKCANNE------ 444
V+ L++G+ K +R A +L + LT P +I D+L + C E
Sbjct: 511 EVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLG 570
Query: 445 -------FKSVV---ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGG 494
SVV LV G G + + R + M P Y ++I C G
Sbjct: 571 KINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFG 630
Query: 495 NVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTL-RSCNLND 549
V +A + M G + + ++K + + + +R + R LND
Sbjct: 631 RVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 131/323 (40%), Gaps = 66/323 (20%)
Query: 152 RLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH------------ 199
R M G Y I++ CKN A ++L G D H
Sbjct: 184 RRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRG 243
Query: 200 ------------------------AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
+Y +LI LC RL EA L +M +G P RT
Sbjct: 244 LNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRT 303
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 295
Y L++A C +G K F+L DE+I +G P++ TY LI GLC + +EA
Sbjct: 304 YTVLIKALCDRGLIDKAFNLFDEMIPRG--------CKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
+ R M + + P ++Y+A+I+G+ + + AFEL L + +K C P
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL-LTVMEKRACKP---------- 404
Query: 356 KDLSNHDTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
N TF+ L+ C K A LK PD VSY +L++GL ++ A
Sbjct: 405 ----NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA 460
Query: 413 KRLL----LFYIVAHCLTIPSYI 431
+LL F I CLT + I
Sbjct: 461 YKLLSSMNCFDIEPDCLTFTAII 483
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/475 (21%), Positives = 199/475 (41%), Gaps = 80/475 (16%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN +++ LC G+ +A +L+ M D PD V+YN LI C + +++ Y
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC---REGHMNTAY--- 461
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+L M ++ P+ T+ +I FC + + + A L LM KG+S + + +I
Sbjct: 462 -KLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
CK + AL + ++ I H+ +++ +L ++ E + ++ G+ P
Sbjct: 521 VCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPS 580
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP----YYV------------------- 269
TY TLV+ G+ + F + + + G LP Y +
Sbjct: 581 VVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLS 640
Query: 270 ----TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 325
+ SP+ VTY ++ G + D ALE +R M E + ++ YS+++ GF +
Sbjct: 641 AMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQ 700
Query: 326 E--------------LRKA-----FELKLEMDQ-------------KETCWPLDQDTNES 353
+ LR+ EL ++Q C D +
Sbjct: 701 KGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESND 760
Query: 354 LVKDLSNHDTF-----SSLVNDYCAEDKAEMALK---LRYQAQYLPDSVSYCLLLNGLHK 405
LV+++ F ++ YC++ K ++ L ++ ++P S+CL++ GL K
Sbjct: 761 LVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKK 820
Query: 406 KATSRFAKRLLLFYIVAHCLTIPSYII--YDILIEKCANNEFKSVVELVKGFRMR 458
+ + A+ L++ + ++ + S ++ + L+E + V++LV R
Sbjct: 821 EGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQLHCR 875
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 128/340 (37%), Gaps = 64/340 (18%)
Query: 221 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL--PYYVTSF------ 272
++ M G G Y T+V A C G ++++ GF+ + TS
Sbjct: 183 YRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCR 242
Query: 273 --------------------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 312
+P+ V+Y+ LIHGLC R +EA + M E P
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 313 SYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 372
+Y+ +I + KAF L EM + C P N T++ L++ C
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPR-GCKP--------------NVHTYTVLIDGLC 347
Query: 373 AEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPS 429
+ K E A + + + P ++Y L+NG K +P+
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR-----------------VVPA 390
Query: 430 YIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 489
+ + ++ ++ ++ EL++G G +A ML P+ YN+LI
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 490 HCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDE 529
C G+++ AY + M + + A+I A +C +
Sbjct: 451 LCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA-FCKQ 489
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 101/242 (41%), Gaps = 42/242 (17%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVT----YNTLISAAC------EAEKNHN 104
+V++ ++ L G I + +L+ M C+ Y +I+ C EAEK
Sbjct: 581 VVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK--- 637
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
L M +SPN TY M++ + + +++ A+ +R M E+G +
Sbjct: 638 ----------LLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDR 687
Query: 165 SYSRIISRFC------KNKEMGKALEMKVEMLD----KGIFPDVHAYG--------LLIQ 206
YS ++ F N E ++ + D + V G L+
Sbjct: 688 IYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVT 747
Query: 207 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
LC + R E+ DL Q +L RG+ + D ++E+YC K + +K L V++ GF+P
Sbjct: 748 RLCKEGRTDESNDLVQNVLERGVFL-EKAMDIIMESYCSKKKHTKCMELITLVLKSGFVP 806
Query: 267 YY 268
+
Sbjct: 807 SF 808
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 223/486 (45%), Gaps = 55/486 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
LV+ + +I LC +GR+ EA ++ M + PD VTY +++ C++ N L++
Sbjct: 175 LVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKS-GNSALAL--- 230
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+L+ +M R + + Y +I C ++A+ + M KG+ +YS +I
Sbjct: 231 ---DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
C + + +M EM+ + I PDV + LI + + +LLEA++L+ EM+ RG++
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY++L++ +C + + + D ++ KG P +VTY+ LI+ C +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKG--------CEPDIVTYSILINSYCKAK 399
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
R D+ + + R + L P+ ++Y+ ++ GF + +L A EL EM + +
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM--------VSRGV 451
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL--RYQAQYLPDSVS-YCLLLNGLHKKA 407
S+V T+ L++ C + AL++ + Q + + Y ++++G+
Sbjct: 452 PPSVV-------TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN-- 502
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARA 467
S+ LF ++ P + Y+++I G +G ++EA
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMI---------------GGLCKKGSLSEADML 547
Query: 468 RDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYC 527
M P+ YN+LI H G + + ++ +EM GF S + ++ +
Sbjct: 548 FRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADS-STIKMVIDMLS 606
Query: 528 DERYNE 533
D R ++
Sbjct: 607 DRRLDK 612
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 172/385 (44%), Gaps = 45/385 (11%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
P+ T+ ++ FC RV EAV ++ M E P + S +I+ C + +AL +
Sbjct: 138 PDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVL 197
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
M++ G PD YG ++ LC A DLF++M R + Y ++++ C
Sbjct: 198 IDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCK 257
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
G F L +E+ KG +VTY++LI GLC + D+ ++LR M
Sbjct: 258 DGSFDDALSLFNEMEMKG--------IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS-NHDTF 364
+ PD V++SA+I F + +L +A EL NE + + ++ + T+
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKEL----------------YNEMITRGIAPDTITY 353
Query: 365 SSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIV 421
+SL++ +C E+ +A L PD V+Y +L+N K R + LF +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK--AKRVDDGMRLFREI 411
Query: 422 AHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 481
+ IP+ I Y+ LV GF G +N A M+ R P
Sbjct: 412 SSKGLIPNTITYN---------------TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 482 VYNLLIFDHCIGGNVHKAYDMYKEM 506
Y +L+ C G ++KA +++++M
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKM 481
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 168/403 (41%), Gaps = 48/403 (11%)
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
+V +A+ + M + P ++R+ S + K+ L M GI D++
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
++I C +++LL A + G P T+ TLV +CL+G S+ L D +++
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE- 168
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
P LVT + LI+GLC R EAL ++ M E PDEV+Y V++
Sbjct: 169 -------MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC 221
Query: 323 RIRELRKAFELKLEMDQKETCWPLDQDT--NESLVKDLSNHD------------------ 362
+ A +L +M+++ + Q + +SL KD S D
Sbjct: 222 KSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVV 281
Query: 363 TFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRFAKRLLLFY 419
T+SSL+ C + K + K+ + +PD V++ L++ K+ AK L
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 420 IVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 479
I P I Y+ LI+ GF ++EA + D M+ + P+
Sbjct: 342 ITRG--IAPDTITYNSLID---------------GFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 480 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI 522
Y++LI +C V +++E+ G + + + L+
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 122/541 (22%), Positives = 230/541 (42%), Gaps = 84/541 (15%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEK--------N 102
+ SFN +IK C ++ + + ++T PD VT+NTL+ C ++
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
+ + ++ V L+ QM L+P T+ +I C RV EA ++ M KGL
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
+Y I++ CK + AL + +M + I PDV Y +I LC +A+ LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------ 270
EML +G++P TY+ +++ +C G +S L ++I++ P +T
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 271 ---------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 315
P VTYN++I+G C R D+A + M +++ PD V+++
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFN 436
Query: 316 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 375
+I + R + + + +L E+ ++ ++N T+++L++ +C D
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGL---------------VANTTTYNTLIHGFCEVD 481
Query: 376 KAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYII 432
A L + PD+++ +LL G + + + L LF ++ +
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCE--NEKLEEALELFEVIQMSKIDLDTVA 539
Query: 433 YDILIEK-CANNEFKSVVEL-------------------VKGFRMRGLVNEAARARDTML 472
Y+I+I C ++ +L + GF + +++A M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYN 532
+ P+ + YN LI G + K+ ++ EM GF F++ ++ L D R +
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI-KMVADLITDGRLD 658
Query: 533 E 533
+
Sbjct: 659 K 659
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 198/462 (42%), Gaps = 84/462 (18%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ LY +M +R + N ++ +I+ FCD +++ ++ + + G P +++ ++
Sbjct: 126 ISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHG 185
Query: 173 FCKNKEMGKALEM-----------KVEMLDK----GIFPDVHAYGLLIQLLCHQRRLLEA 217
C + +AL + V + D+ G+ P V + LI LC + R+LEA
Sbjct: 186 LCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 218 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------- 270
L +M+ +G+ TY T+V C G+ +L ++ + P V
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 271 --------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 310
+P++ TYN +I G C F R +A +LR M E ++PD
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD-------- 362
++++A+IS + +L +A +L EM + C D T S++ H+
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 363 ----------TFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATS 409
TF+++++ YC + + ++L + + ++ +Y L++G +
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARAR 468
A+ L +++H + P I +IL+ C N + + +EL + +M +
Sbjct: 484 NAAQDLFQ-EMISHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKI------DL 535
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
DT+ YN++I C G V +A+D++ + +G
Sbjct: 536 DTV----------AYNIIIHGMCKGSKVDEAWDLFCSLPIHG 567
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 152/364 (41%), Gaps = 55/364 (15%)
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
+++I F + A+ + +M + I +++++ +LI+ C +L + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV-------TSFSPSLVTY 279
G P T++TL+ CL+ S+ L +++ GFL +P ++T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 280 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 339
N LI+GLC R EA ++ M L D V+Y +++G ++ + + A L +M+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME- 288
Query: 340 KETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSY 396
E+ +K + +S++++ C + A+ + P+ +Y
Sbjct: 289 ------------ETHIK--PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 397 CLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFR 456
+++G A+RLL +IE+ N + + L+
Sbjct: 335 NCMIDGFCSFGRWSDAQRLL-----------------RDMIEREINPDVLTFNALISASV 377
Query: 457 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMF 516
G + EA + D MLHR P+ YN +I+ C H +D K HMF
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC----KHNRFDDAK---------HMF 424
Query: 517 SVLA 520
++A
Sbjct: 425 DLMA 428
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 214/493 (43%), Gaps = 52/493 (10%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+ N ++ LC +G++ + T L ++ + PD VTYNTLISA
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME-------EA 289
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
EL + M + SP TY +I C + E A + M GLSP + +Y ++
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
CK ++ + ++ +M + + PD+ + ++ L L +A F + G+ P
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
Y L++ YC KG S +L++E++Q+G + +VTYN ++HGLC +
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGC--------AMDVVTYNTILHGLCKRKML 461
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
EA ++ M E L PD + + +I G ++ L+ A EL +M +K LD T
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI--RLDVVTYN 519
Query: 353 SLVKDLSNHDTFSSLVN-DYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRF 411
+L+ D F + + D E A+M K + LP +SY +L+N L K
Sbjct: 520 TLL------DGFGKVGDIDTAKEIWADMVSK-----EILPTPISYSILVNALCSKGHLAE 568
Query: 412 AKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTM 471
A R ++D +I K ++KG+ G ++ + M
Sbjct: 569 AFR-----------------VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM 611
Query: 472 LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM--LHYGFVCHMFSVLALIKALYCDE 529
+ + P+ YN LI+ N+ KA+ + K+M G V +F+ +++
Sbjct: 612 ISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQN 671
Query: 530 RYNEMSWVIRNTL 542
+ E V+R +
Sbjct: 672 QMKEAEVVLRKMI 684
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 191/466 (40%), Gaps = 68/466 (14%)
Query: 43 GFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACE 98
GF+ G + ++N VI LC G+ A+ V EM PD TY +L+ AC+
Sbjct: 300 GFSPG-------VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 99 AEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG 158
V +++ M R++ P+ + M+ LF +++A+ + E G
Sbjct: 353 KGD-------VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 159 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 218
L P Y+ +I +C+ + A+ ++ EML +G DV Y ++ LC ++ L EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 219 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 278
LF EM R + P T L++ +C G L ++ +K +VT
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK--------RIRLDVVT 517
Query: 279 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 338
YN L+ G D A EI M + P +SYS +++ L +AF + EM
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 339 QKET--------------CWPLDQDTNESLVKDLSNHD------TFSSLVNDYCAEDKAE 378
K C + ES ++ + + ++++L+ + E+
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637
Query: 379 MALKL-----RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIY 433
A L Q +PD +Y +L+G ++ + A+ ++
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE-----------------VVL 680
Query: 434 DILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 479
+IE+ N + + ++ GF + + EA R D ML R + P+
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/468 (23%), Positives = 193/468 (41%), Gaps = 49/468 (10%)
Query: 96 ACEAEKNHNLSIPYVRIV-ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLM 154
AC A + I +V + +Y ++ + N T M+ C ++E+ L +
Sbjct: 202 ACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV 261
Query: 155 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 214
EKG+ P +Y+ +IS + M +A E+ M KG P V+ Y +I LC +
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 215 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 274
A+++F EML G+SP TY +L+ C KG+ + +K F P
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET--------EKVFSDMRSRDVVP 373
Query: 275 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 334
LV +++++ D+AL + E L PD V Y+ +I G+ R + A L+
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 335 LEMDQKETCWPL-------------------DQDTNESLVKDL-SNHDTFSSLVNDYCAE 374
EM Q+ + D+ NE + L + T + L++ +C
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 375 DKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYI 431
+ A++L + + D V+Y LL+G K AK + + L P+ I
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL--PTPI 551
Query: 432 IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHC 491
Y IL+ + +G + EA R D M+ +N +P + N +I +C
Sbjct: 552 SYSILVNALCS---------------KGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Query: 492 IGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 539
GN ++M+ GFV S LI +E ++ +++
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVK 644
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 189/460 (41%), Gaps = 76/460 (16%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
+S +A+I L GR+ +A++ L M V+ ++++ N
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSN------------- 160
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
N++ + +IR + ++ EA L+ KG + D+ + +I +
Sbjct: 161 --------CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVR 212
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
+ A + E+ G+ +V+ +++ LC ++ + ++ +G+ P T
Sbjct: 213 IGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT 272
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 295
Y+TL+ AY KG + F L + + KG FSP + TYN +I+GLC + + A
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKG--------FSPGVYTYNTVINGLCKHGKYERA 324
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
E+ M L PD +Y +++ E C D E +
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLL---------------------MEACKKGDVVETEKVF 363
Query: 356 KDLSNHDT------FSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKK 406
D+ + D FSS+++ + DKA M +A +PD+V Y +L+ G +K
Sbjct: 364 SDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRK 423
Query: 407 ATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAAR 466
+++ + ++L + CA + + ++ G R ++ EA +
Sbjct: 424 GM----------------ISVAMNLRNEMLQQGCA-MDVVTYNTILHGLCKRKMLGEADK 466
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
+ M R P+ +LI HC GN+ A +++++M
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 219/514 (42%), Gaps = 93/514 (18%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+F+ +I LC EGR+ EA ++ M + P +T N L++ C K + + R
Sbjct: 143 VTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDR 202
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+VE Q PNE TY ++++ C + A+ +LR M E+ + A YS II
Sbjct: 203 MVETGFQ-------PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIID 255
Query: 172 RFCKNKEMGKAL----EMKV-------------------------------EMLDKGIFP 196
CK+ + A EM++ +M+ + I P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
DV A+ LI + +L EA +L +EM+ RG+SP TY +L++ +C + + K H+
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
D ++ KG P++ T+N LI+G C D+ LE+ R M + D V+Y+
Sbjct: 376 DLMVSKG--------CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 317 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK 376
+I GF + +L A EL EM + + +V ++ L++ C +
Sbjct: 428 LIQGFCELGKLEVAKELFQEM--------VSRRVRPDIV-------SYKILLDGLCDNGE 472
Query: 377 AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYI--IYD 434
E AL++ K S+ + ++ I+ H + S + +D
Sbjct: 473 PEKALEI-------------------FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 435 ILIE---KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHC 491
+ K + K+ ++ G +G ++EA M + P G YN+LI H
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHL 573
Query: 492 IGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
G+ K+ + +E+ GF +V ++ L
Sbjct: 574 GEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 146/303 (48%), Gaps = 26/303 (8%)
Query: 41 IPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAA 96
I GF A ++ + +I+ C GR + +L++M PD V ++ LI
Sbjct: 275 IKGFKAD-------IIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 97 CEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAE 156
+ K EL+ +M R +SP+ TY +I FC N++++A +L LM
Sbjct: 328 VKEGKLREAE-------ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 157 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 216
KG P+ +++ +I+ +CK + LE+ +M +G+ D Y LIQ C +L
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 217 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 276
A++LFQEM+ R + P +Y L++ C GE K + +++ + + +
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEK--------SKMELDI 492
Query: 277 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 336
YN +IHG+C + D+A ++ +P + PD +Y+ +I G + L +A L +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 337 MDQ 339
M++
Sbjct: 553 MEE 555
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 183/437 (41%), Gaps = 53/437 (12%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
V+L+ +M P + + + + + + + + M KG++ + + S +I+
Sbjct: 57 VDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINC 116
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
C+ +++ A +++ G PD + LI LC + R+ EA +L M+ G P
Sbjct: 117 CCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT 176
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
T + LV CL G+ S L D +++ G F P+ VTY ++ +C +
Sbjct: 177 LITLNALVNGLCLNGKVSDAVLLIDRMVETG--------FQPNEVTYGPVLKVMCKSGQT 228
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK------------ 340
A+E+LR M E + D V YS +I G + L AF L EM+ K
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 341 --ETCWPLDQDTNESLVKDLSNHD------TFSSLVNDYCAEDK---AEMALKLRYQAQY 389
C+ D L++D+ FS+L++ + E K AE K Q
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGI 348
Query: 390 LPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSV 448
PD+V+Y L++G K+ A +L + C P+ ++ILI C N
Sbjct: 349 SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG--PNIRTFNILINGYCKANLIDDG 406
Query: 449 VELVKGFRMRGLVNE-------------------AARARDTMLHRNYRPEGAVYNLLIFD 489
+EL + +RG+V + A M+ R RP+ Y +L+
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 490 HCIGGNVHKAYDMYKEM 506
C G KA ++++++
Sbjct: 467 LCDNGEPEKALEIFEKI 483
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 127/262 (48%), Gaps = 40/262 (15%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEK----NHNLS 106
+V+F+A+I EG++REAE + +EM PD VTY +LI C+ + NH L
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376
Query: 107 I-------PYVRI-----------------VELYHQMCVRELSPNETTYRCMIRLFCDRN 142
+ P +R +EL+ +M +R + + TY +I+ FC+
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
++E A + + M + + P SY ++ C N E KALE+ ++ + D+ Y
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYN 496
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
++I +C+ ++ +A DLF + L+G+ P +TY+ ++ C KG S+ L ++ +
Sbjct: 497 IIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Query: 263 GFLPYYVTSFSPSLVTYNALIH 284
G SP+ TYN LI
Sbjct: 557 G--------HSPNGCTYNILIR 570
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 216/480 (45%), Gaps = 57/480 (11%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
E +V+ ++++ C RI +A ++ +M + PD T+ TLI HN +
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL----HNKAS 205
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
V +V+ QM R P+ TY ++ C R ++ A+ +L M + + ++
Sbjct: 206 EAVALVD---QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
II CK + + A+++ EM KGI P+V Y LI LC+ R +A L ML +
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
++P T++ L++A+ +G+ + L +E+IQ+ S P +TYN LI+G C
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR--------SIDPDTITYNLLINGFC 374
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
R DEA ++ + M P+ +Y+ +I+GF + + + EL EM Q+
Sbjct: 375 MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGL----- 429
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLH 404
+ N T+++++ + D A+M K + D ++Y +LL+GL
Sbjct: 430 ----------VGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
+ + L++F + + IY+ +IE G G V EA
Sbjct: 480 --SYGKLDTALVIFKYLQKSEMELNIFIYNTMIE---------------GMCKAGKVGEA 522
Query: 465 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
D + +P+ YN +I C + +A D++++M G + + + LI+A
Sbjct: 523 W---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 126/534 (23%), Positives = 220/534 (41%), Gaps = 87/534 (16%)
Query: 31 KGLVSPPNVLIPGF--AAGKATTEKCLVSFNA-----VIKRLCGEGRIREAETVLQEMTD 83
+G+ +PP V P F G E+ S + + RL ++ +A + +M
Sbjct: 19 QGIGNPPTV--PSFFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVK 76
Query: 84 ----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFC 139
P V +N L+SA + K + ++ L QM +S + TY I FC
Sbjct: 77 SRPFPSIVEFNKLLSAVAKMNK-------FELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 140 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 199
R+++ A+ +L M + G P + S +++ +C +K + A+ + +M++ G PD
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD-- 257
+ LI L + EA L +M+ RG P TY T+V C +G+ +L +
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Query: 258 -------------------------EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
EV F P++VTYN+LI+ LC + R
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
+A +L M E ++P+ V+++A+I F + +L +A +L EM Q+ +D DT
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS----IDPDT-- 363
Query: 353 SLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATS 409
T++ L+N +C D+A+ K LP+ +Y L+NG K
Sbjct: 364 ---------ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK--CK 412
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIE--------KCANNEFKSVVE----------- 450
R + LF ++ + + + Y +I+ A FK +V
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 451 -LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
L+ G G ++ A + +YN +I C G V +A+D++
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLF 526
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 199/447 (44%), Gaps = 56/447 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
LV++ V+ LC G I A +L +M + V +NT+I + C+ +V
Sbjct: 223 LVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR--------HV 274
Query: 111 RI-VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
+ V+L+ +M + + PN TY +I C+ R +A +L M EK ++P+ +++ +
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I F K ++ +A ++ EM+ + I PD Y LLI C RL EA+ +F+ M+ +
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P +TY+TL+ +C L E+ Q+G + + VTY +I G FF
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLV--------GNTVTYTTIIQG--FF 444
Query: 290 QRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
Q D A + + M + D ++YS ++ G +L A + + + E
Sbjct: 445 QAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMEL--- 501
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 407
N +++++ C K A L PD V+Y +++GL
Sbjct: 502 ------------NIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGL---- 545
Query: 408 TSRFAKRLL-----LFYIVAHCLTIPSYIIYDILIEKCANN-EFKSVVELVKGFRMRGLV 461
+KRLL LF + T+P+ Y+ LI + + + EL+K R G V
Sbjct: 546 ---CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFV 602
Query: 462 NEAARAR--DTMLHRNYRPEGAVYNLL 486
+A+ MLH + R + + N+L
Sbjct: 603 GDASTISLVTNMLH-DGRLDKSFLNML 628
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 130/536 (24%), Positives = 237/536 (44%), Gaps = 58/536 (10%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNH 103
K E +V+ ++++ C RI +A ++ +M + PD +T+ TLI H
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL----H 203
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
N + V +V+ +M R PN TY ++ C R + A+ +L M +
Sbjct: 204 NKASEAVALVD---RMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
++ II CK + + AL + EM KGI P+V Y LI LC R +A L +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M+ + ++P T++ L++A+ +G+F + L D++I++ S P + TYN+L+
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR--------SIDPDIFTYNSLV 372
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
+G C R D+A ++ M PD V+Y+ +I GF + + + EL EM +
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR--- 429
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLL 400
LV D T+++L+ + D A+ K PD ++Y +LL
Sbjct: 430 ---------GLVGDTV---TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 401 NGLHKKATSRFAKRLLLF-YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRG 459
+GL + K L +F Y+ + + YI ++ C + +L ++G
Sbjct: 478 DGLCNNG--KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG 535
Query: 460 LVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVL 519
+ +P YN +I C + +AY + K+M G + + +
Sbjct: 536 V----------------KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 520 ALIKALYCDERYNEMSWVIRNTLRSCN-LNDSEQLKILDEIDPERCIIYALLDVLA 574
LI+A D + +IR +RSC + D+ + ++ + + + + LD+L+
Sbjct: 580 TLIRAHLRDGDKAASAELIRE-MRSCRFVGDASTIGLVANMLHDGRLDKSFLDMLS 634
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 189/446 (42%), Gaps = 55/446 (12%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P V +N L+SA + +K + ++ L +M E+ TY +I FC R++
Sbjct: 83 PSIVEFNKLLSAIAKMKK-------FDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ 135
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ A+ +L M + G P + S +++ +C K + A+ + +M++ G PD +
Sbjct: 136 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 195
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
LI L + EA L M+ RG P TY +V C +G+ +L +++
Sbjct: 196 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM---- 251
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+V +N +I LC ++ D+AL + + M + P+ V+YS++IS
Sbjct: 252 ----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
A +L +M +K+ N +LV TF++L++ + E K A KL
Sbjct: 308 YGRWSDASQLLSDMIEKK--------INPNLV-------TFNALIDAFVKEGKFVEAEKL 352
Query: 384 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK- 439
+ PD +Y L+NG AK++ F + C P + Y+ LI+
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF--PDVVTYNTLIKGF 410
Query: 440 CANNEFKSVVELVKGFRMRGLVNE-------------------AARARDTMLHRNYRPEG 480
C + + EL + RGLV + A + M+ P+
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 481 AVYNLLIFDHCIGGNVHKAYDMYKEM 506
Y++L+ C G + KA +++ M
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 180/437 (41%), Gaps = 62/437 (14%)
Query: 122 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 181
R S YR ++R ++++A+G+ M + P +++++S K K+
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV 103
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
+ + +M I ++ Y +LI C + ++ A L +M+ G P T +L+
Sbjct: 104 VISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVT---------------------------SFSP 274
YC S L D++++ G+ P +T P
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 223
Query: 275 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 334
+LVTY +++GLC D AL +L M ++ D V ++ +I + R + A L
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 335 LEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLP 391
EM+ K N T+SSL++ C+ + A +L + + P
Sbjct: 284 KEMETKGI---------------RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 392 DSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVEL 451
+ V++ L++ K+ A++L YD +I++ + + + L
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKL-----------------YDDMIKRSIDPDIFTYNSL 371
Query: 452 VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
V GF M +++A + + M+ ++ P+ YN LI C V ++++EM H G
Sbjct: 372 VNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL 431
Query: 512 VCHMFSVLALIKALYCD 528
V + LI+ L+ D
Sbjct: 432 VGDTVTYTTLIQGLFHD 448
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 210/461 (45%), Gaps = 55/461 (11%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+N ++ L G + E + V EM + P+ TYN +++ C+ + +IV
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E L P+ TY +I +C R ++ A + M KG + +Y+ +I
Sbjct: 246 E-------AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
C + + +A+++ V+M D FP V Y +LI+ LC R EA +L +EM G+ P
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
TY L+++ C + +F K L ++++KG + P+++TYNALI+G C +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLM--------PNVITYNALINGYCKRGMIE 410
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
+A++++ M L P+ +Y+ +I G+ + + KA + +M ++
Sbjct: 411 DAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLER------------- 456
Query: 354 LVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR 410
K L + T++SL++ C D A L L +PD +Y +++ L K + R
Sbjct: 457 --KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK--SKR 512
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDT 470
+ LF + P+ ++Y LI+ G+ G V+EA +
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALID---------------GYCKAGKVDEAHLMLEK 557
Query: 471 MLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
ML +N P +N LI C G + +A + ++M+ G
Sbjct: 558 MLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 212/483 (43%), Gaps = 58/483 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+ ++N ++ C G + EA + ++ DPD TY +LI C+ + +L +
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRK---DLDSAF- 273
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+++++M ++ NE Y +I C R++EA+ + M + P +Y+ +I
Sbjct: 274 ---KVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
C ++ +AL + EM + GI P++H Y +LI LC Q + +AR+L +ML +G+
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY+ L+ YC +G + + + + SP+ TYN LI G C
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESR--------KLSPNTRTYNELIKGYCK-S 441
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
+A+ +L M E + PD V+Y+++I G R A+ L M+ +
Sbjct: 442 NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR---------- 491
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKA 407
LV D T++S+++ C + E A L Q P+ V Y L++G K
Sbjct: 492 --GLVPD---QWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAAR 466
A +L + +CL P+ + ++ LI CA+ + K EA
Sbjct: 547 KVDEAHLMLEKMLSKNCL--PNSLTFNALIHGLCADGKLK----------------EATL 588
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
+ M+ +P + +LI G+ AY +++ML G + I+ Y
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT-Y 647
Query: 527 CDE 529
C E
Sbjct: 648 CRE 650
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 111/497 (22%), Positives = 212/497 (42%), Gaps = 67/497 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
++++NA+I C G I +A V++ M P+ TYN LI C++ + + +
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGV--- 449
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++M R++ P+ TY +I C + A +L LM ++GL P +Y+ +I
Sbjct: 450 -----LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
CK+K + +A ++ + KG+ P+V Y LI C ++ EA + ++ML +
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCL 564
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-------------------- 270
P T++ L+ C G+ + L++++++ G P T
Sbjct: 565 PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSR 624
Query: 271 -------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
P TY I C R +A +++ M E + PD +YS++I G+
Sbjct: 625 FQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD 684
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL---------SNHDTFSSLVNDYCAE 374
+ + AF++ M + C P Q T SL+K L + ++ N +
Sbjct: 685 LGQTNFAFDVLKRM-RDTGCEP-SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 375 DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYD 434
E+ K+ + P++ SY L+ G+ + R A+++ ++ PS ++++
Sbjct: 743 TVVELLEKM-VEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS-PSELVFN 800
Query: 435 ILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGG 494
L+ C +L K NEAA+ D M+ + P+ +LI G
Sbjct: 801 ALLSCCC--------KLKKH-------NEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 495 NVHKAYDMYKEMLHYGF 511
+ +++ +L G+
Sbjct: 846 EKERGTSVFQNLLQCGY 862
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 173/394 (43%), Gaps = 60/394 (15%)
Query: 184 EMK---VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 240
EMK +EML+ + P+++ Y ++ C + EA +++ G+ P TY +L+
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 241 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 300
YC + + F + +E+ KG + V Y LIHGLC +R DEA+++
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGC--------RRNEVAYTHLIHGLCVARRIDEAMDLFV 312
Query: 301 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
M + P +Y+ +I +A L EM+ E+ +K N
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME-------------ETGIK--PN 357
Query: 361 HDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGLHKKATSRFAKRLLL 417
T++ L++ C++ K E A +L Q +P+ ++Y L+NG + KR ++
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING--------YCKRGMI 409
Query: 418 FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 477
V + +++ + + ++ EL+KG+ + V++A + ML R
Sbjct: 410 EDAVD---------VVELMESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVL 459
Query: 478 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWV 537
P+ YN LI C GN AY + M G V ++ ++I +L +R E
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE---- 515
Query: 538 IRNTLRSCNLNDSEQLKILDEIDPERCIIYALLD 571
+C+L DS + K ++P + AL+D
Sbjct: 516 ------ACDLFDSLEQK---GVNPNVVMYTALID 540
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 134/571 (23%), Positives = 227/571 (39%), Gaps = 130/571 (22%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+ +++++ L G+I EA +++ + D P+ YN LI + C+ K H +
Sbjct: 334 AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAEL----- 388
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS------------ 160
L+ +M L PN+ TY +I +FC R +++ A+ L M + GL
Sbjct: 389 --LFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING 446
Query: 161 -----------------------PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 197
P +Y+ ++ +C ++ KAL + EM KGI P
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506
Query: 198 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 257
++ + L+ L + +A LF EM + P TY+ ++E YC +G+ SK F
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 258 EVIQKGFLPYYVTSFSPSL----------------------------VTYNALIHGLCFF 289
E+ +KG +P S+ P + + Y L+HG C
Sbjct: 567 EMTEKGIVPD-TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM------------ 337
+ +EAL + + M + +D D V Y +I G + ++ + F L EM
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 338 -----------DQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKL 383
D KE D NE V N T+++++N C ++AE+
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCV---PNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 384 RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CAN 442
+P+ V+Y L+ L K K + L + L + + Y++LI C
Sbjct: 743 MQPVSSVPNQVTYGCFLDILTKGEVD-MQKAVELHNAILKGL-LANTATYNMLIRGFCRQ 800
Query: 443 NEFKSVVELVKGFRMRG------------LVNEAARARD---------TMLHRNYRPEGA 481
+ EL+ RM G ++NE R D +M + RP+
Sbjct: 801 GRIEEASELIT--RMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRV 858
Query: 482 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
YN LI C+ G + KA ++ EML G +
Sbjct: 859 AYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 189/444 (42%), Gaps = 50/444 (11%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+EL++ M + P+ Y +IR C+ + A ++ M G + Y+ +I
Sbjct: 212 MELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDG 271
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
CK +++ +A+ +K ++ K + PDV Y L+ LC + ++ EML SP
Sbjct: 272 LCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPS 331
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
+LVE +G+ + +L V+ G SP+L YNALI LC ++
Sbjct: 332 EAAVSSLVEGLRKRGKIEEALNLVKRVVDFGV--------SPNLFVYNALIDSLCKGRKF 383
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM---DQKETCWPLDQD 349
EA + M ++ L P++V+YS +I F R +L A EM K + +P
Sbjct: 384 HEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP---- 439
Query: 350 TNESLVKDLSNHDTFSSLVNDYCA---EDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKK 406
++SL+N +C AE + + P V+Y L+ G K
Sbjct: 440 --------------YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 407 ATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAAR 466
+ K L L++ + PS IY + L+ G GL+ +A +
Sbjct: 486 G--KINKALRLYHEMTGKGIAPS--IY-------------TFTTLLSGLFRAGLIRDAVK 528
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
+ M N +P YN++I +C G++ KA++ KEM G V +S LI L
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 527 CDERYNEMSWVIRNTLR-SCNLND 549
+ +E + + +C LN+
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNE 612
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 135/567 (23%), Positives = 229/567 (40%), Gaps = 101/567 (17%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V +N +I LC + ++ EA + +++ PD VTY TL+ C+ ++ +
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE-------FE 314
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRL----------------- 153
+E+ +M SP+E ++ R ++EEA+ +++
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 154 ------------------MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 195
M + GL P+ +YS +I FC+ ++ AL EM+D G+
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLK 434
Query: 196 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 255
V+ Y LI C + A EM+ + + P TY +L+ YC KG+ +K L
Sbjct: 435 LSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 256 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 315
E+ KG +PS+ T+ L+ GL +A+++ M E + P+ V+Y+
Sbjct: 495 YHEMTGKG--------IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYN 546
Query: 316 AVISGFRRIRELRKAFELKLEMDQKET--------------CWPLDQDTNESLVKDLS-- 359
+I G+ ++ KAFE EM +K C + V L
Sbjct: 547 VMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG 606
Query: 360 ----NHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLN----------- 401
N ++ L++ +C E K E AL + Q D V Y +L++
Sbjct: 607 NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLF 666
Query: 402 -GLHKKATSRFAKRLLLFY---IVAHCLT---IPSYIIYDILI-EKCANNEFKSVVELVK 453
GL K+ R K + Y I A T ++ I+D++I E C NE + ++
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV-TYTAVIN 725
Query: 454 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNV--HKAYDMYKEMLHYGF 511
G G VNEA M + P Y + D G V KA +++ +L G
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DILTKGEVDMQKAVELHNAILK-GL 783
Query: 512 VCHMFSVLALIKALYCDERYNEMSWVI 538
+ + + LI+ R E S +I
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELI 810
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 202/520 (38%), Gaps = 95/520 (18%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
PD Y +I + CE + +LS R E+ M N Y +I C + +
Sbjct: 225 PDVYIYTGVIRSLCELK---DLS----RAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML------------- 190
V EAVGI + +A K L P +Y ++ CK +E LEM EML
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 191 ----------------------DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
D G+ P++ Y LI LC R+ EA LF M G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 288
+ P TY L++ +C +G+ E++ G S+ YN+LI+G C
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG--------LKLSVYPYNSLINGHCK 449
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 348
F A + M L+P V+Y++++ G+ ++ KA L EM K +
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 349 DTN-------ESLVKDL-------------SNHDTFSSLVNDYCAE---DKAEMALKLRY 385
T L++D N T++ ++ YC E KA LK
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 386 QAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNE 444
+ +PD+ SY L++GL + AK + +C + I Y L+ C +
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL--NEICYTGLLHGFCREGK 627
Query: 445 FKSVVELVKGFRMRG----------LVNEAARARD---------TMLHRNYRPEGAVYNL 485
+ + + + RG L++ + + +D M R +P+ +Y
Sbjct: 628 LEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTS 687
Query: 486 LIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
+I G+ +A+ ++ M++ G V + + A+I L
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 134/310 (43%), Gaps = 21/310 (6%)
Query: 32 GLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCV 87
G S V + G G + + + ++ C EG++ EA +V QEM D D V
Sbjct: 591 GQASEAKVFVDGLHKGNCELNE--ICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
Y LI + + K+ L L +M R L P++ Y MI +EA
Sbjct: 649 CYGVLIDGSLK-HKDRKL------FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
GI LM +G P+ +Y+ +I+ CK + +A + +M P+ YG + +
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI 761
Query: 208 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 267
L ++ +L+G+ TY+ L+ +C +G + L +I G
Sbjct: 762 LTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV--- 818
Query: 268 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 327
SP +TY +I+ LC +A+E+ M E + PD V+Y+ +I G E+
Sbjct: 819 -----SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 328 RKAFELKLEM 337
KA EL+ EM
Sbjct: 874 GKATELRNEM 883
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 97/187 (51%), Gaps = 11/187 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++ AVI LC G + EAE + +M + P+ VTY + + E + +
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE------VDMQK 771
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
VEL H ++ L N TY +IR FC + R+EEA ++ M G+SP +Y+ +I+
Sbjct: 772 AVEL-HNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
C+ ++ KA+E+ M +KGI PD AY LI C + +A +L EML +G+ P
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890
Query: 232 GGRTYDT 238
+T T
Sbjct: 891 NNKTSRT 897
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVR 111
V + ++I G +EA + M + CV TY +I+ C+A +V
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKA--------GFVN 734
Query: 112 IVE-LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E L +M PN+ TY C + + + L KGL + +Y+ +I
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
FC+ + +A E+ M+ G+ PD Y +I LC + + +A +L+ M +G+
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTS 271
P Y+TL+ C+ GE K L++E++++G +P TS
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTS 895
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 223/526 (42%), Gaps = 83/526 (15%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEK--------N 102
+ SFN +IK C ++ + + ++T PD VT+NTL+ C ++
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG 200
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
+ + ++ V L+ QM L+P T+ +I C RV EA ++ M KGL
Sbjct: 201 YMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID 260
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
+Y I++ CK + AL + +M + I PDV Y +I LC +A+ LF
Sbjct: 261 VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFS 320
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------ 270
EML +G++P TY+ +++ +C G +S L ++I++ P +T
Sbjct: 321 EMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 271 ---------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 315
P VTYN++I+G C R D+A + M +++ PD V+++
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFN 436
Query: 316 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 375
+I + R + + + +L E+ ++ ++N T+++L++ +C D
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGL---------------VANTTTYNTLIHGFCEVD 481
Query: 376 KAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYII 432
A L + PD+++ +LL G + + + L LF ++ +
Sbjct: 482 NLNAAQDLFQEMISHGVCPDTITCNILLYGFCE--NEKLEEALELFEVIQMSKIDLDTVA 539
Query: 433 YDILIEK-CANNEFKSVVEL-------------------VKGFRMRGLVNEAARARDTML 472
Y+I+I C ++ +L + GF + +++A M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSV 518
+ P+ + YN LI G + K+ ++ EM GF F++
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 195/455 (42%), Gaps = 84/455 (18%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ LY +M +R + N ++ +I+ FCD +++ ++ + + G P +++ ++
Sbjct: 126 ISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHG 185
Query: 173 FCKNKEMGKALEM-----------KVEMLDK----GIFPDVHAYGLLIQLLCHQRRLLEA 217
C + +AL + V + D+ G+ P V + LI LC + R+LEA
Sbjct: 186 LCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 218 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------- 270
L +M+ +G+ TY T+V C G+ +L ++ + P V
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 271 --------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 310
+P++ TYN +I G C F R +A +LR M E ++PD
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD-------- 362
++++A+IS + +L +A +L EM + C D T S++ H+
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHR--CIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 363 ----------TFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATS 409
TF+++++ YC + + ++L + + ++ +Y L++G +
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARAR 468
A+ L +++H + P I +IL+ C N + + +EL + +M +
Sbjct: 484 NAAQDLFQ-EMISHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKI------DL 535
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
DT+ YN++I C G V +A+D++
Sbjct: 536 DTV----------AYNIIIHGMCKGSKVDEAWDLF 560
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 152/364 (41%), Gaps = 55/364 (15%)
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
+++I F + A+ + +M + I +++++ +LI+ C +L + F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV-------TSFSPSLVTY 279
G P T++TL+ CL+ S+ L +++ GFL +P ++T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 280 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 339
N LI+GLC R EA ++ M L D V+Y +++G ++ + + A L +M+
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME- 288
Query: 340 KETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSY 396
E+ +K + +S++++ C + A+ + P+ +Y
Sbjct: 289 ------------ETHIK--PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTY 334
Query: 397 CLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFR 456
+++G A+RLL +IE+ N + + L+
Sbjct: 335 NCMIDGFCSFGRWSDAQRLL-----------------RDMIEREINPDVLTFNALISASV 377
Query: 457 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMF 516
G + EA + D MLHR P+ YN +I+ C H +D K HMF
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFC----KHNRFDDAK---------HMF 424
Query: 517 SVLA 520
++A
Sbjct: 425 DLMA 428
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 207/480 (43%), Gaps = 60/480 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREA----ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+FN VI L GR EA E +++ +P +TY+ L+ A+
Sbjct: 295 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK---------- 344
Query: 111 RIVELY---HQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
RI + Y +M + PN Y +I F + + +A+ I LM KGLS + +Y+
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+I +CKN + A + EML G + ++ +I LLC A EMLLR
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
MSPGG TL+ C G+ SK L + + KGF+ TS NAL+HGLC
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--------NALLHGLC 516
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
+ DEA I + + D VSY+ +ISG ++L +AF LD
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF------------LD 564
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLH 404
+ L D + T+S L+ +K E A++ + LPD +Y ++++G
Sbjct: 565 EMVKRGLKPD---NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
K + + F + P+ ++Y+ L++ + G ++ A
Sbjct: 622 KAERTEEGQE--FFDEMMSKNVQPNTVVYN---------------HLIRAYCRSGRLSMA 664
Query: 465 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
R+ M H+ P A Y LI I V +A +++EM G ++F ALI
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 210/510 (41%), Gaps = 95/510 (18%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P T N L+++ A + + + E + +C + +SP+ + I FC +
Sbjct: 224 PSKTTCNILLTSLVRANE-------FQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGGK 275
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
VEEAV + M E G++P+ +++ +I +A K +M+++G+ P + Y +
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L++ L +R+ +A + +EM +G P Y+ L++++ G +K ++D ++ KG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI----- 318
S + TYN LI G C + D A +L+ M + + ++ S+++VI
Sbjct: 396 --------LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 319 -----SGFRRIREL-------------------------RKAFELKLEMDQKETCWPLDQ 348
S R + E+ KA EL + K + +D
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG--FVVDT 505
Query: 349 DTNESLVKDLS----------------------NHDTFSSLVNDYCAE---DKAEMALKL 383
T+ +L+ L + ++++L++ C + D+A M L
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 384 RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANN 443
+ PD+ +Y +L+ GL ++ + + + +P Y ++I+ C
Sbjct: 566 MVKRGLKPDNYTYSILICGLFN--MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 444 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
E E D M+ +N +P VYN LI +C G + A ++
Sbjct: 624 E---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 504 KEMLHYGFVCHMFSVLALIKALYCDERYNE 533
++M H G + + +LIK + R E
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 156/357 (43%), Gaps = 37/357 (10%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+I LC G+ +A + + + D T N L+ CEA K L +
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK---LDEAFRIQK 529
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E+ + CV + +Y +I C + +++EA L M ++GL P +YS +I
Sbjct: 530 EILGRGCVMD----RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
++ +A++ + G+ PDV+ Y ++I C R E ++ F EM+ + + P
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
Y+ L+ AYC G S L++++ KG SP+ TY +LI G+ R +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVE 697
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
EA + M L+P+ Y+A+I G+ ++ ++ K L EM K
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV----------- 746
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKA 407
N T++ ++ Y + A +L + + +PDS++Y + G K+
Sbjct: 747 ----HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 180/456 (39%), Gaps = 100/456 (21%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
E L++++ ++K L RI +A VL+EMT P+ + YN LI + EA +
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN---- 382
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG--------- 158
+ +E+ M + LS +TY +I+ +C + + A +L+ M G
Sbjct: 383 ---KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 159 --------------------------LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK 192
+SP + +IS CK+ + KALE+ + L+K
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G D L+ LC +L EA + +E+L RG +Y+TL+ C K + +
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 253 FHLQDEVIQKGFLPYYVT---------------------------SFSPSLVTYNALIHG 285
F DE++++G P T P + TY+ +I G
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
C +R +E E M + P+ V Y+ +I + R L A EL+ +M K
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI--S 677
Query: 346 LDQDTNESLVKDLS----------------------NHDTFSSLVNDYCAED---KAEMA 380
+ T SL+K +S N +++L++ Y K E
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 381 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLL 416
L+ + P+ ++Y +++ G + A RLL
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 19/281 (6%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
VS+N +I CG+ ++ EA L EM PD TY+ LI K
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE-------E 593
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
++ + + P+ TY MI C R EE M K + P+ Y+ +I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+C++ + ALE++ +M KGI P+ Y LI+ + R+ EA+ LF+EM + G+ P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
Y L++ Y G+ KV L E+ K + P+ +TY +I G
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSK--------NVHPNKITYTVMIGGYARDGN 765
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 332
EA +L M E + PD ++Y I G+ + + +AF+
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+++ +I C R E + EM P+ V YN LI A C + + LS+
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR---LSMA---- 664
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+EL M + +SPN TY +I+ +RVEEA + M +GL P+ Y+ +I
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ K +M K + EM K + P+ Y ++I + EA L EM +G+ P
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDE 258
TY + Y +G + F DE
Sbjct: 785 SITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 44/347 (12%)
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
AL++ + +KG+FP +L+ L + + F +++ +G+SP + T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 301
A+C G+ + L ++ + G +P++VT+N +I GL R DEA
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 302 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNH 361
M E ++P ++YS ++ G R + + A+ + EM +K +P N
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG--FP-------------PNV 365
Query: 362 DTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLF 418
+++L++ + A++++ S +Y L+ G K + A+RLL
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL-- 423
Query: 419 YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 478
L+I + F SV+ L+ M + A R ML RN P
Sbjct: 424 ---KEMLSIGFNV---------NQGSFTSVICLLCSHLM---FDSALRFVGEMLLRNMSP 468
Query: 479 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
G + LI C G KA +++ + L+ GFV + AL+ L
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 207/480 (43%), Gaps = 60/480 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREA----ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+FN VI L GR EA E +++ +P +TY+ L+ A+
Sbjct: 295 VVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK---------- 344
Query: 111 RIVELY---HQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
RI + Y +M + PN Y +I F + + +A+ I LM KGLS + +Y+
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+I +CKN + A + EML G + ++ +I LLC A EMLLR
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
MSPGG TL+ C G+ SK L + + KGF+ TS NAL+HGLC
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTS--------NALLHGLC 516
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
+ DEA I + + D VSY+ +ISG ++L +AF LD
Sbjct: 517 EAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMF------------LD 564
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLH 404
+ L D + T+S L+ +K E A++ + LPD +Y ++++G
Sbjct: 565 EMVKRGLKPD---NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
K + + F + P+ ++Y+ L++ + G ++ A
Sbjct: 622 KAERTEEGQE--FFDEMMSKNVQPNTVVYN---------------HLIRAYCRSGRLSMA 664
Query: 465 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
R+ M H+ P A Y LI I V +A +++EM G ++F ALI
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/510 (21%), Positives = 210/510 (41%), Gaps = 95/510 (18%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P T N L+++ A + + + E + +C + +SP+ + I FC +
Sbjct: 224 PSKTTCNILLTSLVRANE-------FQKCCEAFDVVC-KGVSPDVYLFTTAINAFCKGGK 275
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
VEEAV + M E G++P+ +++ +I +A K +M+++G+ P + Y +
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L++ L +R+ +A + +EM +G P Y+ L++++ G +K ++D ++ KG
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI----- 318
S + TYN LI G C + D A +L+ M + + ++ S+++VI
Sbjct: 396 --------LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 319 -----SGFRRIREL-------------------------RKAFELKLEMDQKETCWPLDQ 348
S R + E+ KA EL + K + +D
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG--FVVDT 505
Query: 349 DTNESLVKDLS----------------------NHDTFSSLVNDYCAE---DKAEMALKL 383
T+ +L+ L + ++++L++ C + D+A M L
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 384 RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANN 443
+ PD+ +Y +L+ GL ++ + + + +P Y ++I+ C
Sbjct: 566 MVKRGLKPDNYTYSILICGLFN--MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 444 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
E E D M+ +N +P VYN LI +C G + A ++
Sbjct: 624 E---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 504 KEMLHYGFVCHMFSVLALIKALYCDERYNE 533
++M H G + + +LIK + R E
Sbjct: 669 EDMKHKGISPNSATYTSLIKGMSIISRVEE 698
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 156/357 (43%), Gaps = 37/357 (10%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+I LC G+ +A + + + D T N L+ CEA K L +
Sbjct: 473 LTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK---LDEAFRIQK 529
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E+ + CV + +Y +I C + +++EA L M ++GL P +YS +I
Sbjct: 530 EILGRGCVMD----RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
++ +A++ + G+ PDV+ Y ++I C R E ++ F EM+ + + P
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
Y+ L+ AYC G S L++++ KG SP+ TY +LI G+ R +
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGI--------SPNSATYTSLIKGMSIISRVE 697
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
EA + M L+P+ Y+A+I G+ ++ ++ K L EM K
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNV----------- 746
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKA 407
N T++ ++ Y + A +L + + +PDS++Y + G K+
Sbjct: 747 ----HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 180/456 (39%), Gaps = 100/456 (21%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
E L++++ ++K L RI +A VL+EMT P+ + YN LI + EA +
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLN---- 382
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG--------- 158
+ +E+ M + LS +TY +I+ +C + + A +L+ M G
Sbjct: 383 ---KAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFT 439
Query: 159 --------------------------LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK 192
+SP + +IS CK+ + KALE+ + L+K
Sbjct: 440 SVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNK 499
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G D L+ LC +L EA + +E+L RG +Y+TL+ C K + +
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 253 FHLQDEVIQKGFLPYYVT---------------------------SFSPSLVTYNALIHG 285
F DE++++G P T P + TY+ +I G
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
C +R +E E M + P+ V Y+ +I + R L A EL+ +M K
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI--S 677
Query: 346 LDQDTNESLVKDLS----------------------NHDTFSSLVNDYCAED---KAEMA 380
+ T SL+K +S N +++L++ Y K E
Sbjct: 678 PNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECL 737
Query: 381 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLL 416
L+ + P+ ++Y +++ G + A RLL
Sbjct: 738 LREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 126/281 (44%), Gaps = 19/281 (6%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
VS+N +I CG+ ++ EA L EM PD TY+ LI K
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVE-------E 593
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
++ + + P+ TY MI C R EE M K + P+ Y+ +I
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+C++ + ALE++ +M KGI P+ Y LI+ + R+ EA+ LF+EM + G+ P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
Y L++ Y G+ KV L E+ K + P+ +TY +I G
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSK--------NVHPNKITYTVMIGGYARDGN 765
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 332
EA +L M E + PD ++Y I G+ + + +AF+
Sbjct: 766 VTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 11/206 (5%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+++ +I C R E + EM P+ V YN LI A C + + LS+
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR---LSMA---- 664
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+EL M + +SPN TY +I+ +RVEEA + M +GL P+ Y+ +I
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ K +M K + EM K + P+ Y ++I + EA L EM +G+ P
Sbjct: 725 YGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPD 784
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDE 258
TY + Y +G + F DE
Sbjct: 785 SITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 44/347 (12%)
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
AL++ + +KG+FP +L+ L + + F +++ +G+SP + T +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAIN 268
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 301
A+C G+ + L ++ + G +P++VT+N +I GL R DEA
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGV--------APNVVTFNTVIDGLGMCGRYDEAFMFKEK 320
Query: 302 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNH 361
M E ++P ++YS ++ G R + + A+ + EM +K +P N
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKG--FP-------------PNV 365
Query: 362 DTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLF 418
+++L++ + A++++ S +Y L+ G K + A+RLL
Sbjct: 366 IVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL-- 423
Query: 419 YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRP 478
L+I + F SV+ L+ M + A R ML RN P
Sbjct: 424 ---KEMLSIGFNV---------NQGSFTSVICLLCSHLM---FDSALRFVGEMLLRNMSP 468
Query: 479 EGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
G + LI C G KA +++ + L+ GFV + AL+ L
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 218/509 (42%), Gaps = 60/509 (11%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
E +V+ ++++ C RI +A ++ +M + PD +T+ TLI HN +
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL----HNKAS 132
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
V +V+ +M R PN TY ++ C R ++ A +L M + ++
Sbjct: 133 EAVALVD---RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
II CK + + AL + EM KGI P+V Y LI LC R +A L +M+ +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
++P T++ L++A+ +G+F + L D++I++ S P + TYN+LI+G C
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR--------SIDPDIFTYNSLINGFC 301
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
R D+A ++ M PD +Y+ +I GF + + + EL EM +
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR------- 354
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLH 404
LV D T+++L+ + D A+ K PD ++Y +LL+GL
Sbjct: 355 -----GLVGDTV---TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Query: 405 KKATSRFAKRLLLF-YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRG---- 459
+ K L +F Y+ + + YI ++ C + +L ++G
Sbjct: 407 NNG--KLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 460 ---------------LVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYK 504
L+ EA M P+ YN LI H G+ + ++ +
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 505 EMLHYGFVCHMFSVLALIKALYCDERYNE 533
EM FV S + L+ + D R ++
Sbjct: 525 EMRSCRFVGDA-STIGLVANMLHDGRLDK 552
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 175/390 (44%), Gaps = 56/390 (14%)
Query: 49 ATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAAC------- 97
A E +V FN +I LC + +A + +EM P+ VTY++LIS C
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 98 ---------EAEKNHNLSI------------PYVRIVELYHQMCVRELSPNETTYRCMIR 136
E + N NL +V +L+ M R + P+ TY +I
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 137 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 196
FC +R+++A + M K P D+Y+ +I FCK+K + E+ EM +G+
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
D Y LIQ L H A+ +F++M+ G+ P TY L++ C G+ K +
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
D +QK + + Y +I G+C + D+ ++ + + P+ V+Y+
Sbjct: 419 D-YMQK-------SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNT 470
Query: 317 VISGFRRIRELRKAFELKLEMDQKETCWPL-DQDTNESLVK-DLSNHDTFSSLVNDYCAE 374
+ISG R L++A+ L +M + PL D T +L++ L + D +S
Sbjct: 471 MISGLCSKRLLQEAYALLKKMKED---GPLPDSGTYNTLIRAHLRDGDKAAS-------- 519
Query: 375 DKAEMALKLRYQAQYLPDSVSYCLLLNGLH 404
AE+ ++R +++ D+ + L+ N LH
Sbjct: 520 --AELIREMR-SCRFVGDASTIGLVANMLH 546
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 189/446 (42%), Gaps = 55/446 (12%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P +N L+SA + +K + ++ L +M +S N TY +I FC R++
Sbjct: 8 PSIFEFNKLLSAIAKMKK-------FDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ A+ +L M + G P + S +++ +C K + A+ + +M++ G PD +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
LI L + EA L M+ RG P TY +V C +G+ F+L +++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM---- 176
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+V +N +I LC ++ D+AL + + M + P+ V+YS++IS
Sbjct: 177 ----EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
A +L +M +K+ N +LV TF++L++ + E K A KL
Sbjct: 233 YGRWSDASQLLSDMIEKK--------INPNLV-------TFNALIDAFVKEGKFVEAEKL 277
Query: 384 R---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK- 439
+ PD +Y L+NG AK++ F + C P Y+ LI+
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF--PDLDTYNTLIKGF 335
Query: 440 CANNEFKSVVELVKGFRMRGLVNE-------------------AARARDTMLHRNYRPEG 480
C + + EL + RGLV + A + M+ P+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 481 AVYNLLIFDHCIGGNVHKAYDMYKEM 506
Y++L+ C G + KA +++ M
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYM 421
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 188/387 (48%), Gaps = 54/387 (13%)
Query: 38 NVLIPGFAA-GKATTEKCLVS-------------FNAVIKRLCGEGRIREAETVLQEMTD 83
N L+ GF+ G+ + ++S +N ++ +C EGR A VL+EM +
Sbjct: 264 NTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKE 320
Query: 84 ----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFC 139
PD V+YN LI N +L + + E+ Q V P TY +I
Sbjct: 321 IGLVPDSVSYNILIRGC---SNNGDLEMAFAYRDEMVKQGMV----PTFYTYNTLIHGLF 373
Query: 140 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 199
N++E A ++R + EKG+ + +Y+ +I+ +C++ + KA + EM+ GI P
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
Y LI +LC + + EA +LF++++ +GM P +TL++ +C G + F L E+
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 260 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
+ S +P VTYN L+ GLC + +EA E++ M + PD +SY+ +IS
Sbjct: 494 --------DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 320 GFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEM 379
G+ + + + AF ++ EM L N +L+ T+++L+ + E+
Sbjct: 546 GYSKKGDTKHAFMVRDEM--------LSLGFNPTLL-------TYNALLKGLSKNQEGEL 590
Query: 380 ALKLRYQAQ---YLPDSVSYCLLLNGL 403
A +L + + +P+ S+C ++ +
Sbjct: 591 AEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 134/272 (49%), Gaps = 19/272 (6%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVRI 112
++N +I L E +I AE +++E+ + D VTYN LI+ C+ +
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAK-------KA 416
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
L+ +M + P + TY +I + C +N+ EA + + KG+ P + ++
Sbjct: 417 FALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
C M +A + EM I PD Y L++ LC + + EAR+L EM RG+ P
Sbjct: 477 HCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
+Y+TL+ Y KG+ F ++DE++ G F+P+L+TYNAL+ GL Q
Sbjct: 537 HISYNTLISGYSKKGDTKHAFMVRDEMLSLG--------FNPTLLTYNALLKGLSKNQEG 588
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
+ A E+LR M + P++ S+ +VI +
Sbjct: 589 ELAEELLREMKSEGIVPNDSSFCSVIEAMSNL 620
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 182/416 (43%), Gaps = 50/416 (12%)
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
Y M E+ N T+ MI + C ++++A G L +M G+ P +Y+ ++ F
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
+ A + EM KG PD+ Y ++ +C++ R A ++ +EM G+ P
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSV 328
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
+Y+ L+ G+ F +DE++++G +P + TYN LIHGL F + E
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTF--------YTYNTLIHGL-FMENKIE 379
Query: 295 ALEIL-RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
A EIL R + E + D V+Y+ +I+G+ + + +KAF L EM + P
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM-MTDGIQP-------- 430
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSR 410
T++SL+ C ++K A +L + PD V L++G A
Sbjct: 431 ------TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG--HCAIGN 482
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARD 469
+ L + P + Y+ L+ C +F+ EL+ + RG+
Sbjct: 483 MDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGI--------- 533
Query: 470 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
+P+ YN LI + G+ A+ + EML GF + + AL+K L
Sbjct: 534 -------KPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 194/429 (45%), Gaps = 52/429 (12%)
Query: 122 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 181
R + N + Y +IR++ +++++ I RLM G +P + + I+ K+ E
Sbjct: 157 RLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVS 216
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
EML + I PDV + +LI +LC + ++ L Q+M G +P TY+T++
Sbjct: 217 VWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 301
YC KG F L D + KG + TYN LIH LC R + +LR
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKG--------VDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328
Query: 302 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS-N 360
M + ++ P+EV+Y+ +I+GF ++ A +L NE L LS N
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQL----------------LNEMLSFGLSPN 372
Query: 361 HDTFSSLVNDYCAEDKAEMALKLRY--QAQYL-PDSVSYCLLLNGLHKKATSRFAKRLLL 417
H TF++L++ + +E + ALK+ Y +A+ L P VSY +LL+GL K A A+
Sbjct: 373 HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARG--- 429
Query: 418 FYI-VAHCLTIPSYIIYDILIEKCANNEF--KSVV------------------ELVKGFR 456
FY+ + I Y +I+ N F ++VV L+ GF
Sbjct: 430 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFC 489
Query: 457 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMF 516
G A + P G +Y+ LI++ C G + +A +Y+ M+ G F
Sbjct: 490 KVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHF 549
Query: 517 SVLALIKAL 525
+ L+ +L
Sbjct: 550 TFNVLVTSL 558
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/499 (23%), Positives = 215/499 (43%), Gaps = 61/499 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+ +FN +I LC EG ++ ++Q+M P VTYNT++ C+ + +
Sbjct: 233 VATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR-------FK 285
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+EL M + + + TY +I C NR+ + +LR M ++ + P+ +Y+ +I
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ F ++ A ++ EML G+ P+ + LI + EA +F M +G++
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF-LPYYVTSFSPSLVTYNALIHGLCFF 289
P +Y L++ C EF + +GF + +TY +I GLC
Sbjct: 406 PSEVSYGVLLDGLCKNAEFD---------LARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ---------- 339
DEA+ +L M + +DPD V+YSA+I+GF ++ + A E+ + +
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Query: 340 --------KETCWPLDQDTNESLVKD--LSNHDTFSSLVNDYCAEDK---AEMALKLRYQ 386
+ C E+++ + +H TF+ LV C K AE ++
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576
Query: 387 AQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFK 446
LP++VS+ L+NG + ++ ++D + + + F
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEG-----------------LKAFSVFDEMTKVGHHPTFF 619
Query: 447 SVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
+ L+KG G + EA + ++ + +YN L+ C GN+ KA ++ EM
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Query: 507 LHYGFVCHMFSVLALIKAL 525
+ + ++ +LI L
Sbjct: 680 VQRSILPDSYTYTSLISGL 698
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 203/475 (42%), Gaps = 56/475 (11%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
++ +I+ EG I+++ + + M +P T N ++ + ++ ++ V +
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGED-------VSVW 218
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+M R++ P+ T+ +I + C E++ +++ M + G +P +Y+ ++ +
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
CK A+E+ M KG+ DV Y +LI LC R+ + L ++M R + P
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNE 338
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
TY+TL+ + +G+ L +E++ G SP+ VT+NALI G
Sbjct: 339 VTYNTLINGFSNEGKVLIASQLLNEMLSFG--------LSPNHVTFNALIDGHISEGNFK 390
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
EAL++ M L P EVSY ++ G + E A + M + C
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC---------- 440
Query: 354 LVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR 410
T++ +++ C D+A + L + PD V+Y L+NG K +
Sbjct: 441 -----VGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFK 495
Query: 411 FAKRLLL-FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 469
AK ++ Y V P+ IIY LI C RM G + EA R +
Sbjct: 496 TAKEIVCRIYRVGLS---PNGIIYSTLIYNCC--------------RM-GCLKEAIRIYE 537
Query: 470 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
M+ + + +N+L+ C G V +A + + M G + + S LI
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 117/503 (23%), Positives = 210/503 (41%), Gaps = 64/503 (12%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++ +++K LC G +REAE L+ + D V YNTL++A C K+ NL+ +
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC---KSGNLA----KA 672
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG-LSPHADSYSRIIS 171
V L+ +M R + P+ TY +I C + + A+ + +G + P+ Y+ +
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 732
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K + + + +M + G PD+ +I ++ + DL EM + P
Sbjct: 733 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP 792
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY+ L+ Y + + S F L +I G LP +T S L+ G+C
Sbjct: 793 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHS--------LVLGICESNM 844
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
+ L+IL+ ++ D +++ +IS E+ AF+L M LD+DT
Sbjct: 845 LEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI--SLDKDTC 902
Query: 352 ESLVKDLSNHDTFS----------------------SLVNDYCAEDKAEMALKLRYQA-- 387
+++V L+ + F L+N C + A ++ +
Sbjct: 903 DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 962
Query: 388 -QYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFK 446
+ P +V+ ++ L K + A LL F + +P+ + L+ C N
Sbjct: 963 HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK--LVPTIASFTTLMHLCCKN--- 1017
Query: 447 SVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
G V EA R M + + + YN+LI C G++ A+++Y+EM
Sbjct: 1018 ------------GNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065
Query: 507 LHYGFVCHMFSVLALIKALYCDE 529
GF+ + + ALI+ L E
Sbjct: 1066 KGDGFLANATTYKALIRGLLARE 1088
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 118/529 (22%), Positives = 209/529 (39%), Gaps = 96/529 (18%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVR 111
+++ +I LC G + EA +L EM+ DPD VTY+ LI+ C+ + R
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503
Query: 112 I----------------------------VELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
I + +Y M + + + T+ ++ C +
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
V EA +R M G+ P+ S+ +I+ + + E KA + EM G P YG
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L++ LC L EA + + + Y+TL+ A C G +K L E++Q+
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS 683
Query: 264 FLPYYVTSFSPSLVTYNALIHGLC---------FFQRPDEALEILRGMPEMLLDPDEVSY 314
LP TY +LI GLC F + EA RG + P++V Y
Sbjct: 684 ILP--------DSYTYTSLISGLCRKGKTVIAILFAKEAEA----RGN----VLPNKVMY 727
Query: 315 SAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE 374
+ + G + + + + +MD N D+ T +++++ Y
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMD------------NLGHTPDIV---TTNAMIDGYSRM 772
Query: 375 DKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKK--ATSRFAKRLLLFYIVAHCLTIPS 429
K E L P+ +Y +LL+G K+ ++ F LL I+ + +
Sbjct: 773 GKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF---LLYRSIILNGILPDK 829
Query: 430 YIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 489
+ +++ C +N + ++++K F RG+ E R +N+LI
Sbjct: 830 LTCHSLVLGICESNMLEIGLKILKAFICRGV--EVDRY--------------TFNMLISK 873
Query: 490 HCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVI 538
C G ++ A+D+ K M G + A++ L + R+ E V+
Sbjct: 874 CCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/504 (22%), Positives = 204/504 (40%), Gaps = 89/504 (17%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+FNA+I EG +EA + M P V+Y L+ C+ + Y+R
Sbjct: 374 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 433
Query: 112 I----------------------------VELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
+ V L ++M + P+ TY +I FC R
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ A I+ + GLSP+ YS +I C+ + +A+ + M+ +G D + +
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L+ LC ++ EA + + M G+ P ++D L+ Y GE K F + DE+ + G
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
P+ TY +L+ GLC EA + L+ + + D V Y+ +++ +
Sbjct: 614 --------HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 665
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
L KA L EM Q+ L + T++SL++ C + K +A+
Sbjct: 666 SGNLAKAVSLFGEMVQRSI---------------LPDSYTYTSLISGLCRKGKTVIAILF 710
Query: 384 RYQAQ----YLPDSVSYCLLLNGLHK----KATSRFAKRLLLFYIVAHCLTIPSYIIYDI 435
+A+ LP+ V Y ++G+ K KA F +++ + H P + +
Sbjct: 711 AKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM---DNLGH---TPDIVTTNA 764
Query: 436 LIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGN 495
+I+ G+ G + + M ++N P YN+L+ + +
Sbjct: 765 MID---------------GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 496 VHKAYDMYKEMLHYGFV-----CH 514
V ++ +Y+ ++ G + CH
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCH 833
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 170/370 (45%), Gaps = 37/370 (10%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+ NA+I G+I + +L EM + P+ TYN L+ K ++S ++
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY---SKRKDVSTSFL 815
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
LY + + + P++ T ++ C+ N +E + IL+ +G+ +++ +I
Sbjct: 816 ----LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 871
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
S+ C N E+ A ++ M GI D ++ +L R E+R + EM +G+S
Sbjct: 872 SKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGIS 931
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P R Y L+ C G+ F +++E+I P P+ V +A++ L
Sbjct: 932 PESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP-------PN-VAESAMVRALAKCG 983
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
+ DEA +LR M +M L P S++ ++ + + +A EL++ M +
Sbjct: 984 KADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM------------S 1031
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKA 407
N L DL +++ L+ CA+ +A +L + + +L ++ +Y L+ GL +
Sbjct: 1032 NCGLKLDLVSYNV---LITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARE 1088
Query: 408 TSRFAKRLLL 417
T+ ++L
Sbjct: 1089 TAFSGADIIL 1098
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 180/446 (40%), Gaps = 62/446 (13%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAAC-------------E 98
V +N ++ +C G + +A ++ EM PD TY +LIS C E
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 99 AEKNHNL---SIPYVRIVE-------------LYHQMCVRELSPNETTYRCMIRLFCDRN 142
AE N+ + Y V+ QM +P+ T MI +
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
++E+ +L M + P+ +Y+ ++ + K K++ + + ++ GI PD
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
L+ +C L + + + RG+ T++ L+ C GE + F L
Sbjct: 834 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVK----- 888
Query: 263 GFLPYYVTSFSPSL--VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
+TS SL T +A++ L R E+ +L M + + P+ Y +I+G
Sbjct: 889 -----VMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943
Query: 321 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE-DKAEM 379
R+ +++ AF +K EM + C P ++V+ L+ C + D+A +
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICPP--NVAESAMVRALAK-----------CGKADEATL 990
Query: 380 ALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK 439
L+ + + +P S+ L++ K + L L ++++C + Y++LI
Sbjct: 991 LLRFMLKMKLVPTIASFTTLMHLCCKNGN--VIEALELRVVMSNCGLKLDLVSYNVLITG 1048
Query: 440 -CANNEFKSVVELVKGFRMRGLVNEA 464
CA + EL + + G + A
Sbjct: 1049 LCAKGDMALAFELYEEMKGDGFLANA 1074
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 181/394 (45%), Gaps = 45/394 (11%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
P+ T+ ++ FC NR+ +A ++ LM + G P+ Y+ +I CKN E+ ALE+
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
EM KG+ DV Y L+ LC+ R +A + ++M+ R ++P T+ L++ +
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
+G + L E+IQ +S P+ VTYN++I+GLC R +A + M
Sbjct: 259 QGNLDEAQELYKEMIQ--------SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK 310
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
P+ V+Y+ +ISGF + R + + +L Q+ +C + D T++
Sbjct: 311 GCFPNVVTYNTLISGFCKFRMVDEGMKLF----QRMSCEGFNADIF-----------TYN 355
Query: 366 SLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
+L++ YC K +AL + + PD +++C+LL+GL L+ F +
Sbjct: 356 TLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC--VNGEIESALVKFDDMR 413
Query: 423 HCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 481
+ Y+I+I C ++ + EL + G+ +P+
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGV----------------KPDAR 457
Query: 482 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHM 515
Y ++I C G +A ++ + M G +C M
Sbjct: 458 TYTIMILGLCKNGPRREADELIRRMKEEGIICQM 491
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 37/376 (9%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNH 103
K E +V+F +++ C RI +A +++ M +P+ V YNTLI C KN
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC---KNG 190
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
L+I +EL ++M + L + TY ++ C R +A +LR M ++ ++P
Sbjct: 191 ELNIA----LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
+++ +I F K + +A E+ EM+ + P+ Y +I LC RL +A+ F
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M +G P TY+TL+ +C F + DE + K F F+ + TYN LI
Sbjct: 307 MASKGCFPNVVTYNTLISGFC-------KFRMVDEGM-KLFQRMSCEGFNADIFTYNTLI 358
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
HG C + AL+I M + PD +++ ++ G E+ A +K + D +E+
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL-VKFD-DMRES- 415
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL--RYQAQYL-PDSVSYCLLL 400
E + ++ ++ +++ C DK E A +L R + + PD+ +Y +++
Sbjct: 416 --------EKYIGIVA----YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Query: 401 NGLHKKATSRFAKRLL 416
GL K R A L+
Sbjct: 464 LGLCKNGPRREADELI 479
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 139/290 (47%), Gaps = 19/290 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++N ++ LC GR +A +L++M +PD VT+ LI K NL
Sbjct: 211 VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV---KQGNLD---- 263
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
ELY +M + PN TY +I C R+ +A LMA KG P+ +Y+ +I
Sbjct: 264 EAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLI 323
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
S FCK + + + +++ M +G D+ Y LI C +L A D+F M+ R ++
Sbjct: 324 SGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVT 383
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T+ L+ C+ GE D++ + Y+ +V YN +IHGLC
Sbjct: 384 PDIITHCILLHGLCVNGEIESALVKFDDMRES---EKYI-----GIVAYNIMIHGLCKAD 435
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+ ++A E+ +P + PD +Y+ +I G + R+A EL M ++
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEE 485
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 148/369 (40%), Gaps = 46/369 (12%)
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
+D ++ + F + A + EM+ P + + L+ + RR Q
Sbjct: 36 SDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQ 95
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 282
+M L G+S ++ L+ +C S + ++++ G+ PS+VT+ +L
Sbjct: 96 KMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY--------EPSIVTFGSL 147
Query: 283 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 342
+HG C R +A ++ M + +P+ V Y+ +I G + EL A EL EM++K
Sbjct: 148 LHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK-- 205
Query: 343 CWPLDQDTNESLVKDLSNHDTFSSLVNDYC----AEDKAEMALKLRYQAQYLPDSVSYCL 398
L D+ T+++L+ C D A M L+ + PD V++
Sbjct: 206 ----------GLGADVV---TYNTLLTGLCYSGRWSDAARM-LRDMMKRSINPDVVTFTA 251
Query: 399 LLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMR 458
L++ K+ A+ L Y +I+ + + ++ G M
Sbjct: 252 LIDVFVKQGNLDEAQEL-----------------YKEMIQSSVDPNNVTYNSIINGLCMH 294
Query: 459 GLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSV 518
G + +A + D M + P YN LI C V + +++ M GF +F+
Sbjct: 295 GRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 519 LALIKALYC 527
LI YC
Sbjct: 355 NTLIHG-YC 362
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 176/362 (48%), Gaps = 40/362 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEKNHNLSIPY 109
+V FN +I GR+ +A+ VL +M PD TYN+LI + E L++
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK-EGLVGLAL-- 409
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
E+ H M + PN +Y ++ FC +++EA +L M+ GL P+ ++ +
Sbjct: 410 ----EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
IS FCK + +A+E+ EM KG PDV+ + LI LC + A L ++M+ G+
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP-SLVTYNALIHGLCF 288
TY+TL+ A+ +GE + L +E++ +G SP +TYN+LI GLC
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG---------SPLDEITYNSLIKGLCR 576
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 348
D+A + M P +S + +I+G R + +A E + EM + +
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM--------VLR 628
Query: 349 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL--RYQAQYL-PDSVSYCLLLNGLHK 405
+ +V TF+SL+N C + E L + + QA+ + PD+V++ L++ L K
Sbjct: 629 GSTPDIV-------TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Query: 406 KA 407
Sbjct: 682 GG 683
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 203/466 (43%), Gaps = 63/466 (13%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN VI LC RI EA ++ M PD +TY L++ C+ +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR----------- 337
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIIS 171
V+ + R P + +I F R+++A +L M G+ P +Y+ +I
Sbjct: 338 VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ K +G ALE+ +M +KG P+V++Y +L+ C ++ EA ++ EM G+ P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
++ L+ A+C + + + E+ +KG P + T+N+LI GLC
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGC--------KPDVYTFNSLISGLCEVDE 509
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
AL +LR M + + V+Y+ +I+ F R E+++A +L EM + + PLD+ T
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS--PLDEITY 567
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA---- 407
SL+K L DKA + + + P ++S +L+NGL +
Sbjct: 568 NSLIKGLCRAGEV----------DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAAR 466
F K ++L + P + ++ LI C + + + + + G+
Sbjct: 618 AVEFQKEMVLRG------STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI------ 665
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
P+ +N L+ C GG V+ A + E + GFV
Sbjct: 666 ----------PPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/516 (24%), Positives = 213/516 (41%), Gaps = 88/516 (17%)
Query: 50 TTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEA-EKNHN 104
+ E S+N V++ L + A V +M P T+ ++ A C E +
Sbjct: 177 SCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSA 236
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
LS+ + ++ CV PN Y+ +I NRV EA+ +L M G P A+
Sbjct: 237 LSL----LRDMTKHGCV----PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
+++ +I CK + +A +M ML +G PD YG L+ LC R+ A+DLF +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 225 ----------LLRGMSPGGR----------------------TYDTLVEAYCLKGEFSKV 252
L+ G GR TY++L+ Y +G
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 253 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 312
+ ++ KG P++ +Y L+ G C + DEA +L M L P+ V
Sbjct: 409 LEVLHDMRNKG--------CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV 460
Query: 313 SYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 372
++ +IS F + + +A E+ EM +K C P + TF+SL++ C
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRK-GCKP--------------DVYTFNSLISGLC 505
Query: 373 AEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPS 429
D+ + AL L + ++V+Y L+N ++ + A++L
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL-------------- 551
Query: 430 YIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 489
+ +++ + +E + L+KG G V++A + ML + P N+LI
Sbjct: 552 --VNEMVFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILING 608
Query: 490 HCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
C G V +A + KEM+ G + + +LI L
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 115/247 (46%), Gaps = 32/247 (12%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEK-NHNL----- 105
V FN +I C E RI EA + +EM PD T+N+LIS CE ++ H L
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 106 ---------SIPYVRIV-------------ELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
++ Y ++ +L ++M + +E TY +I+ C
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
V++A + M G +P S + +I+ C++ + +A+E + EM+ +G PD+ +
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
LI LC R+ + +F+++ G+ P T++TL+ C G L DE I+ G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Query: 264 FLPYYVT 270
F+P + T
Sbjct: 700 FVPNHRT 706
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 179/437 (40%), Gaps = 65/437 (14%)
Query: 154 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF---PDVHAYGLLIQLL-- 208
M ++G+ + I+ + K G+ + +EM + ++ P +Y +++++L
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM--RNVYSCEPTFKSYNVVLEILVS 194
Query: 209 --CHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
CH+ A ++F +ML R + P T+ +++A+C E L ++ + G +P
Sbjct: 195 GNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 267 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG---FRR 323
+ V Y LIH L R +EAL++L M M PD +++ VI G F R
Sbjct: 251 --------NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 302
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD-TFSSLVNDYCAEDKAEMALK 382
I E K N L++ + D T+ L+N C + + A
Sbjct: 303 INEAAKM-------------------VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD 343
Query: 383 LRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCAN 442
L Y+ P+ V + L++G AK +L + + Y I+ + C
Sbjct: 344 LFYRIPK-PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS----------YGIVPDVCTY 392
Query: 443 NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDM 502
N L+ G+ GLV A M ++ +P Y +L+ C G + +AY++
Sbjct: 393 NS------LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 503 YKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLND----SEQLKILDE 558
EM G + LI A + R E + R R D + + L E
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 559 IDPERCIIYALLDVLAE 575
+D + ++ L D+++E
Sbjct: 507 VDEIKHALWLLRDMISE 523
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 11/191 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++N +I G I+EA ++ EM + D +TYN+LI C A + +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD-------K 582
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
L+ +M +P+ + +I C VEEAV + M +G +P +++ +I+
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
C+ + L M ++ +GI PD + L+ LC + +A L E + G P
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Query: 232 GGRTYDTLVEA 242
RT+ L+++
Sbjct: 703 NHRTWSILLQS 713
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVR 111
+++N++IK LC G + +A ++ ++M P ++ N LI+ C +
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE-------E 617
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
VE +M +R +P+ T+ +I C R+E+ + + R + +G+ P +++ ++S
Sbjct: 618 AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 218
CK + A + E ++ G P+ + +L+Q + Q L R
Sbjct: 678 WLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 175/390 (44%), Gaps = 43/390 (11%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
P+ T ++ FC RNRV +AV ++ M E G P +Y+ II CK K + A +
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
E+ KGI P+V Y L+ LC+ R +A L +M+ + ++P TY L++A+
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
G+ + L +E+++ S P +VTY++LI+GLC R DEA ++ M
Sbjct: 273 NGKVLEAKELFEEMVR--------MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
D VSY+ +I+GF + + + +L EM Q+ +SN T++
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL---------------VSNTVTYN 369
Query: 366 SLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
+L+ + + A + Q + PD +Y +LL GL A
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA---------- 419
Query: 423 HCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 482
+I++ + ++ + + + +++G G V EA ++ + +P+
Sbjct: 420 -------LVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 483 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
Y ++ C G +H+ +Y +M G +
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 135/283 (47%), Gaps = 19/283 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++NA+I LC R+ +A +E+ P+ VTY L++ C + + +
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR-------WS 242
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
L M ++++PN TY ++ F +V EA + M + P +YS +I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ C + + +A +M M+ KG DV +Y LI C +R+ + LF+EM RG+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
TY+TL++ + G+ K Q+ F SP + TYN L+ GLC
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKA--------QEFFSQMDFFGISPDIWTYNILLGGLCDNG 414
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
++AL I M + +D D V+Y+ VI G + ++ +A+ L
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 168/361 (46%), Gaps = 41/361 (11%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+ +++ C R+ +A +++ +M + PD V YN +I + C+ ++ ++
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND------- 208
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ + ++ + + PN TY ++ C+ +R +A +L M +K ++P+ +YS ++
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
F KN ++ +A E+ EM+ I PD+ Y LI LC R+ EA +F M+ +G
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
+Y+TL+ +C L E+ Q+G + + VTYN LI G FFQ
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV--------SNTVTYNTLIQG--FFQA 378
Query: 292 P--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
D+A E M + PD +Y+ ++ G EL KA + +M ++E +D D
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE----MDLD 434
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKK 406
T+++++ C K E A L PD V+Y +++GL K
Sbjct: 435 IV-----------TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTK 483
Query: 407 A 407
Sbjct: 484 G 484
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 117/237 (49%), Gaps = 19/237 (8%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+++++A++ G++ EA+ + +EM DPD VTY++LI+ C ++ +
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN---- 315
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+++ M + + +Y +I FC RVE+ + + R M+++GL + +Y+ +I
Sbjct: 316 ---QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
F + ++ KA E +M GI PD+ Y +L+ LC L +A +F++M R M
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
TY T++ C G+ + + L F + P +VTY ++ GLC
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSL--------FCSLSLKGLKPDIVTYTTMMSGLC 481
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 146/355 (41%), Gaps = 43/355 (12%)
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
++ ++ A+++ +M+ FP + + L+ + ++ L ++M + G+
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
T++ ++ +C + S + ++++ G+ P VT +L++G C R +
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGY--------EPDRVTIGSLVNGFCRRNRVSD 173
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
A+ ++ M E+ PD V+Y+A+I + + + AF+ E+++K
Sbjct: 174 AVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI------------ 221
Query: 355 VKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRF 411
N T+++LVN C + A +L + + P+ ++Y LL+ K
Sbjct: 222 ---RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLE 278
Query: 412 AKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTM 471
AK L F + P + Y L+ G + ++EA + D M
Sbjct: 279 AKEL--FEEMVRMSIDPDIVTYS---------------SLINGLCLHDRIDEANQMFDLM 321
Query: 472 LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
+ + + YN LI C V +++EM G V + + LI+ +
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 151/283 (53%), Gaps = 16/283 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V + +++ LC GR R+A+++L+ MT PD +T+N LI A + K ++
Sbjct: 212 VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGK-------FL 264
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
ELY++M ++PN TY +I FC V+EA + LM KG P +Y+ +I
Sbjct: 265 DAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLI 324
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ FCK K++ A+++ EM KG+ + Y LIQ + A+++F M+ RG+
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVP 384
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P RTY+ L+ C G+ K + +++ ++ + +P++ TYN L+HGLC+
Sbjct: 385 PNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR-----EMDGVAPNIWTYNVLLHGLCYNG 439
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
+ ++AL + M + +D ++Y+ +I G + +++ A L
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 38/335 (11%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D T N L++ C++ + PY+ +M P+ T+ +I FC NR+
Sbjct: 106 DLYTCNLLMNCFCQSSQ------PYLA-SSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
EEA+ ++ M E G+ P Y+ II CKN + AL + +M + GI PDV Y L
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
+ LC+ R +A L + M R + P T++ L++A+ +G+F L +E+I+
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIR--- 275
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
S +P++ TY +LI+G C DEA ++ M PD V+Y+++I+GF +
Sbjct: 276 -----MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 330
Query: 325 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL- 383
+++ A ++ EM QK N T+++L+ + K +A ++
Sbjct: 331 KKVDDAMKIFYEMSQKGLT---------------GNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 384 -RYQAQYLPDSVS------YCLLLNGLHKKATSRF 411
++ +P ++ +CL NG KKA F
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 173/412 (41%), Gaps = 43/412 (10%)
Query: 98 EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK 157
E +N S+ + ++L+ M P+ + ++ + + + + + +
Sbjct: 42 EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101
Query: 158 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 217
G+S + + +++ FC++ + A +M+ G PD+ + LI C R+ EA
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 218 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 277
+ +M+ G+ P Y T++++ C G + L D++ G P +V
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYG--------IRPDVV 213
Query: 278 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
Y +L++GLC R +A +LRGM + + PD ++++A+I F + + A EL EM
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 338 DQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSV 394
+ N T++SL+N +C E D+A L PD V
Sbjct: 274 IRMSIA---------------PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 395 SYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKG 454
+Y L+NG K + + +FY ++ + I Y LI+ G
Sbjct: 319 AYTSLINGFCK--CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ---------------G 361
Query: 455 FRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
F G N A M+ R P YN+L+ C G V KA ++++M
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 150/329 (45%), Gaps = 43/329 (13%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACE-AEKN 102
K E +V+F ++I C R+ EA +++ +M + PD V Y T+I + C+ N
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 103 HNLS--------------IPYVRIVE-------------LYHQMCVRELSPNETTYRCMI 135
+ LS + Y +V L M R++ P+ T+ +I
Sbjct: 195 YALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALI 254
Query: 136 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF 195
F + +A + M ++P+ +Y+ +I+ FC + +A +M M KG F
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 196 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 255
PDV AY LI C +++ +A +F EM +G++ TY TL++ + G+ K
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF---GQVGK---- 367
Query: 256 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD---PDEV 312
V Q+ F P++ TYN L+H LC+ + +AL I M + +D P+
Sbjct: 368 -PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 313 SYSAVISGFRRIRELRKAFELKLEMDQKE 341
+Y+ ++ G +L KA + +M ++E
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 154/388 (39%), Gaps = 59/388 (15%)
Query: 157 KGLSPHADSYSRI------ISRFCKNKEM----------GKALEMKVEMLDKGIFPDVHA 200
KG S A S+SR+ + FC +E+ +AL++ M++ P +
Sbjct: 15 KGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIID 74
Query: 201 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
+ L+ ++ ++ +L + + G+S T + L+ +C + +++
Sbjct: 75 FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMM 134
Query: 261 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
+ GF P +VT+ +LI+G C R +EA+ ++ M EM + PD V Y+ +I
Sbjct: 135 KLGF--------EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 321 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---A 377
+ + A L DQ N + D+ ++SLVN C + A
Sbjct: 187 LCKNGHVNYALSL------------FDQMENYGIRPDVV---MYTSLVNGLCNSGRWRDA 231
Query: 378 EMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILI 437
+ L+ + + PD +++ L++ K+ A+ L Y+ +I
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL-----------------YNEMI 274
Query: 438 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 497
+ L+ GF M G V+EA + M + P+ Y LI C V
Sbjct: 275 RMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVD 334
Query: 498 KAYDMYKEMLHYGFVCHMFSVLALIKAL 525
A ++ EM G + + LI+
Sbjct: 335 DAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 49/218 (22%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYV 110
+V++ ++I C ++ +A + EM+ + +TY TLI + K P V
Sbjct: 317 VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK------PNV 370
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK---GLSPHADSYS 167
E++ M R + PN TY ++ C +V++A+ I M ++ G++P+ +Y+
Sbjct: 371 A-QEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 168 RIISRFCKNKEMGKAL----EMKVEMLD-------------------------------K 192
++ C N ++ KAL +M+ +D K
Sbjct: 430 VLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK 489
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
G+ P+V Y +I L + EA LF++M G+S
Sbjct: 490 GVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 208/498 (41%), Gaps = 69/498 (13%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V +N ++ C EGR ++E ++++M + PD VT+N+ ISA C+ K + S
Sbjct: 218 VIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS----- 272
Query: 112 IVELYHQMCVREL----SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
++ M + E PN TY M++ FC +E+A + + E SY+
Sbjct: 273 --RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYN 330
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+ ++ + +A + +M DKGI P +++Y +L+ LC L +A+ + M
Sbjct: 331 IWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRN 390
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G+ P TY L+ YC G+ L E+++ LP + T N L+H L
Sbjct: 391 GVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP--------NAYTCNILLHSLW 442
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
R EA E+LR M E D V+ + ++ G EL KA E+ M
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM---------- 492
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 407
+ + + +L N ++ LV+D E+ LPD ++Y LLNGL K
Sbjct: 493 RVHGSAALGNLGN--SYIGLVDDSLIENNC------------LPDLITYSTLLNGLCK-- 536
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVK------------- 453
RFA+ LF + P + Y+I I C + S ++K
Sbjct: 537 AGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLET 596
Query: 454 ------GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 507
G ++ + E D M + P YN I C G V A ++ EM+
Sbjct: 597 YNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMM 656
Query: 508 HYGFVCHMFSVLALIKAL 525
++FS LI+A
Sbjct: 657 QKNIAPNVFSFKYLIEAF 674
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/512 (22%), Positives = 214/512 (41%), Gaps = 90/512 (17%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+N +++ E R+ + ++M P T+N LI A C++ + R
Sbjct: 115 YNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSS-----CVDAAR-- 167
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
EL+ +M + PNE T+ ++R +C ++ + +L M G+ P+ Y+ I+S F
Sbjct: 168 ELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSF 227
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR---GMS 230
C+ + +M +M ++G+ PD+ + I LC + ++L+A +F +M L G+
Sbjct: 228 CREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLP 287
Query: 231 -PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P TY+ +++ +C G L + + + L SL +YN + GL
Sbjct: 288 RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA--------SLQSYNIWLQGLVRH 339
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
+ EA +L+ M + + P SY+ ++ G ++ L A + M + C
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC------ 393
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKK 406
+ T+ L++ YC+ K + A L+ + LP++ + +LL+ L K
Sbjct: 394 ---------PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 407 ATSRFAKRLLL-FYIVAHCL-TIPSYIIYDILIEKCANNEFKSVVELVKGFRMRG----- 459
A+ LL + L T+ II D L C + E +E+VKG R+ G
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGL---CGSGELDKAIEIVKGMRVHGSAALG 501
Query: 460 --------LVNEA--------------------------ARARD---TMLHRNYRPEGAV 482
LV+++ A A++ M+ +P+
Sbjct: 502 NLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA 561
Query: 483 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCH 514
YN+ I C G + A+ + K+M G CH
Sbjct: 562 YNIFIHHFCKQGKISSAFRVLKDMEKKG--CH 591
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 141/348 (40%), Gaps = 77/348 (22%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
L S+N ++ L G+ EAETVL++MTD P +YN L+ C+ +
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKL----GMLSDAK 381
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCD---------------RN------------- 142
IV L + V P+ TY C++ +C RN
Sbjct: 382 TIVGLMKRNGV---CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILL 438
Query: 143 -------RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE----MKV---- 187
R+ EA +LR M EKG + + I+ C + E+ KA+E M+V
Sbjct: 439 HSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSA 498
Query: 188 ---------------EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+++ PD+ Y L+ LC R EA++LF EM+ + P
Sbjct: 499 ALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPD 558
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
Y+ + +C +G+ S F + ++ +KG SL TYN+LI GL +
Sbjct: 559 SVAYNIFIHHFCKQGKISSAFRVLKDMEKKG--------CHKSLETYNSLILGLGIKNQI 610
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
E ++ M E + P+ +Y+ I ++ A L EM QK
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 160/389 (41%), Gaps = 59/389 (15%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAAC---EAEKN--------- 102
N ++ L GRI EAE +L++M + D VT N ++ C E +K
Sbjct: 435 NILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRV 494
Query: 103 ------HNLSIPYVRIVE--LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLM 154
NL Y+ +V+ L C+ P+ TY ++ C R EA + M
Sbjct: 495 HGSAALGNLGNSYIGLVDDSLIENNCL----PDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 155 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 214
+ L P + +Y+ I FCK ++ A + +M KG + Y LI L + ++
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 215 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 274
E L EM +G+SP TY+T ++ C + +L DE++QK + +P
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK--------NIAP 662
Query: 275 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 334
++ ++ LI C D A E+ + E YS + + +L KA EL
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVS-ICGQKEGLYSLMFNELLAAGQLLKATEL- 720
Query: 335 LEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLP 391
E + L KD LV C +D+ E+A + ++ Y
Sbjct: 721 -----LEAVLDRGFELGTFLYKD---------LVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 392 DSVSYCLLLNGL----HKKATSRFAKRLL 416
D + +++GL +KK + FA +++
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANSFADKMM 795
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 142/295 (48%), Gaps = 20/295 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+ ++N +I+ +C EG + A +++ + +PD ++YN L+ A K +
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK-------WE 315
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+L +M + PN TY +I C ++EEA+ +L+LM EKGL+P A SY +I
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ FC+ + A+E M+ G PD+ Y ++ LC + +A ++F ++ G S
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P +Y+T+ A G+ + H+ E++ G P +TYN++I LC
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNG--------IDPDEITYNSMISCLCREG 487
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
DEA E+L M P V+Y+ V+ GF + + A + LE C P
Sbjct: 488 MVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINV-LESMVGNGCRP 541
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 193/458 (42%), Gaps = 64/458 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEK--------N 102
+ ++NA+I C RI +A VL M PD VTYN +I + C K N
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 103 HNLS-------IPYVRIVE-------------LYHQMCVRELSPNETTYRCMIRLFCDRN 142
LS I Y ++E L +M R L P+ TY +IR C
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
V+ A ++R + KG P SY+ ++ + + ++ +M + P+V Y
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
+LI LC ++ EA +L + M +G++P +YD L+ A+C +G + +I
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
G L P +V YN ++ LC + D+ALEI + E+ P+ SY+ + S
Sbjct: 398 GCL--------PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 323 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 382
+ +A + LEM +D D T++S+++ C E + A +
Sbjct: 450 SSGDKIRALHMILEMMSN----GIDPD-----------EITYNSMISCLCREGMVDEAFE 494
Query: 383 L---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK 439
L ++ P V+Y ++L G K A +L + C P+ Y +LIE
Sbjct: 495 LLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR--PNETTYTVLIEG 552
Query: 440 CANNEFKS-VVELVKGFRMRGLVNEAARARDTMLHRNY 476
+++ +EL ++E + R LHR +
Sbjct: 553 IGFAGYRAEAMELANDLVRIDAISEYSFKR---LHRTF 587
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 198/437 (45%), Gaps = 50/437 (11%)
Query: 77 VLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIR 136
+L++ PD YN LI+ C+ + + + R+++ +M ++ SP+ TY MI
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDAT----RVLD---RMRSKDFSPDTVTYNIMIG 201
Query: 137 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 196
C R +++ A+ +L + P +Y+ +I + +AL++ EML +G+ P
Sbjct: 202 SLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKP 261
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
D+ Y +I+ +C + + A ++ + + L+G P +Y+ L+ A +G++
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKW------- 314
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
E +K + P++VTY+ LI LC + +EA+ +L+ M E L PD SY
Sbjct: 315 -EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 317 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK 376
+I+ F R L A E LE + C P D+ N++T ++ C K
Sbjct: 374 LIAAFCREGRLDVAIEF-LETMISDGCLP-----------DIVNYNT---VLATLCKNGK 418
Query: 377 AEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIY 433
A+ AL++ + + P+S SY + + L A ++L ++++ + P I Y
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL-EMMSNGID-PDEITY 476
Query: 434 DILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG 493
+ +I C E G+V+EA M + P YN+++ C
Sbjct: 477 NSMI-SCLCRE--------------GMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKA 521
Query: 494 GNVHKAYDMYKEMLHYG 510
+ A ++ + M+ G
Sbjct: 522 HRIEDAINVLESMVGNG 538
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 169/396 (42%), Gaps = 41/396 (10%)
Query: 134 MIRLF---CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
M+++F C E++ +L M KG +P +++I F + + KA+ + +E+L
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEIL 150
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
+K PDV AY LI C R+ +A + M + SP TY+ ++ + C +G+
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 310
+ ++++ + P+++TY LI DEAL+++ M L PD
Sbjct: 211 LALKVLNQLLSD--------NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 370
+Y+ +I G + + +AFE+ ++ K C P D + L++ L N +
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELK-GCEP-DVISYNILLRALLNQGKW------ 314
Query: 371 YCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSY 430
++ E + + + P+ V+Y +L+ L + A LL
Sbjct: 315 ----EEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL-------------- 356
Query: 431 IIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDH 490
++ EK + S L+ F G ++ A +TM+ P+ YN ++
Sbjct: 357 ---KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATL 413
Query: 491 CIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
C G +A +++ ++ G + S + AL+
Sbjct: 414 CKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 109/245 (44%), Gaps = 40/245 (16%)
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
E+L +L M +PD + + +I GF +R + KA +
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM------------------E 148
Query: 354 LVKDLSNHDTFS--SLVNDYCAEDKAEMALKL--RYQAQ-YLPDSVSYCLLLNGLHKKAT 408
+++ D F+ +L+N +C ++ + A ++ R +++ + PD+V+Y +++ L +
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 409 SRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARAR 468
A ++L + +C P+ I Y ILIE + G V+EA +
Sbjct: 209 LDLALKVLNQLLSDNCQ--PTVITYTILIEATM---------------LEGGVDEALKLM 251
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD 528
D ML R +P+ YN +I C G V +A++M + + G + S L++AL
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311
Query: 529 ERYNE 533
++ E
Sbjct: 312 GKWEE 316
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 212/500 (42%), Gaps = 63/500 (12%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+F I+ L G+I EA +L+ M D PD VTY LI A C A K
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK------ 313
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
E++ +M P+ TY ++ F D ++ M + G P +++ ++
Sbjct: 314 -EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDA 372
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
CK G+A + M D+GI P++H Y LI L RL +A +LF M G+ P
Sbjct: 373 LCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPT 432
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
TY ++ Y G+ +++ KG +P++V NA ++ L R
Sbjct: 433 AYTYIVFIDYYGKSGDSVSALETFEKMKTKG--------IAPNIVACNASLYSLAKAGRD 484
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
EA +I G+ ++ L PD V+Y+ ++ + ++ E+ +A +L EM + C P
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-MENGCEP------- 536
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATS 409
+ +SL+N D+ + A K+ + + + P V+Y LL GL K
Sbjct: 537 -------DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIE-KCANNEFKSVVELVKGFRMRGLVNEAARAR 468
+ A L + C P+ I ++ L + C N+E V A +
Sbjct: 590 QEAIELFEGMVQKGC--PPNTITFNTLFDCLCKNDE----------------VTLALKML 631
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA---YDMYKEMLHYGFVCHMFSVLALIKAL 525
M+ P+ YN +IF G V +A + K++++ FV + ++KA
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAS 691
Query: 526 YCDERYNEMSWVIRNTLRSC 545
++ Y +I N L +C
Sbjct: 692 LIEDAYK----IITNFLYNC 707
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 165/391 (42%), Gaps = 79/391 (20%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+F ++ LC G EA L M D P+ TYNTLI
Sbjct: 363 VVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG--------------- 407
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++R+ +R+++A+ + M G+ P A +Y I
Sbjct: 408 -----------------------LLRV----HRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ K+ + ALE +M KGI P++ A + L R EA+ +F + G+
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY+ +++ Y GE + L E+++ G P ++ N+LI+ L
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP--------DVIVVNSLINTLYKAD 552
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
R DEA ++ M EM L P V+Y+ +++G + ++++A EL M QK C P
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPP----- 606
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKA 407
N TF++L + C D+ +ALK+ ++ + PD +Y ++ GL K
Sbjct: 607 ---------NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNG 657
Query: 408 TSRFA-------KRLLLFYIVAHCLTIPSYI 431
+ A K+L+ V C +P +
Sbjct: 658 QVKEAMCFFHQMKKLVYPDFVTLCTLLPGVV 688
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 155/373 (41%), Gaps = 49/373 (13%)
Query: 61 VIKRLCGEGRIREAETVLQEMT-----DPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
+I+ C + A T+ ++ T P TYN LI EA+ + I +++
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADM---IEIAQDVFLQV 811
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
C+ P+ TY ++ + +++E + + M+ + +++ +IS K
Sbjct: 812 KSTGCI----PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVK 867
Query: 176 NKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
+ AL++ +++ D+ P YG LI L RL EA+ LF+ ML G P
Sbjct: 868 AGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCA 927
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
Y+ L+ + GE L ++++G P L TY+ L+ LC R DE
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGV--------RPDLKTYSVLVDCLCMVGRVDE 979
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
L + + E L+PD V Y+ +I+G + L +A L EM P D T SL
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITP-DLYTYNSL 1038
Query: 355 VKDLS----------------------NHDTFSSLVNDYCAEDKAEMALKLRYQ----AQ 388
+ +L N TF++L+ Y K E A + YQ
Sbjct: 1039 ILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV-YQTMVTGG 1097
Query: 389 YLPDSVSYCLLLN 401
+ P++ +Y L N
Sbjct: 1098 FSPNTGTYEQLPN 1110
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 194/461 (42%), Gaps = 62/461 (13%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVRI 112
++ + K L +G +++A L++M + V +YN LI ++
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRF-------CTEA 207
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+E+Y +M + P+ TY ++ R ++ +G+L+ M GL P+ +++ I
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ ++ +A E+ M D+G PDV Y +LI LC R+L A+++F++M P
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
TY TL++ + + V E+ + G + P +VT+ L+ LC
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV--------PDVVTFTILVDALCKAGNF 379
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ---KETCWPLDQD 349
EA + L M + + P+ +Y+ +I G R+ L A EL M+ K T +
Sbjct: 380 GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY----- 434
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL----KLRYQAQYLPDSVSYCLLLNGLHK 405
T+ ++ Y + AL K++ + P+ V+ L L K
Sbjct: 435 -------------TYIVFIDYYGKSGDSVSALETFEKMKTKG-IAPNIVACNASLYSLAK 480
Query: 406 KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 465
R AK+ +FY + +P + Y++++ KC + G ++EA
Sbjct: 481 AGRDREAKQ--IFYGLKDIGLVPDSVTYNMMM-KC--------------YSKVGEIDEAI 523
Query: 466 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
+ M+ P+ V N LI V +A+ M+ M
Sbjct: 524 KLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 119/506 (23%), Positives = 193/506 (38%), Gaps = 108/506 (21%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD---PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+ ++N +I L G+++EA +M PD VT TL+ +A +L +
Sbjct: 643 VFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKA----SLIEDAYK 698
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
I+ + C + P + +I ++ AV + G+ DS I
Sbjct: 699 IITNFLYNCADQ--PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPII 756
Query: 172 RF-CKNKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
R+ CK+ + A + + D G+ P + Y LLI L + A+D+F ++ G
Sbjct: 757 RYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGC 816
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDE--------------VIQKGFLP--------- 266
P TY+ L++AY G+ ++F L E ++ G +
Sbjct: 817 IPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALD 876
Query: 267 -YYVT----SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
YY FSP+ TY LI GL R EA ++ GM + P+ Y+ +I+GF
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 322 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 381
+ E A C + E + DL T+S LV+ C + + L
Sbjct: 937 GKAGEADAA------------CALFKRMVKEGVRPDLK---TYSVLVDCLCMVGRVDEGL 981
Query: 382 ---KLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIE 438
K ++ PD V Y L++NGL K + R + L+LF
Sbjct: 982 HYFKELKESGLNPDVVCYNLIINGLGK--SHRLEEALVLF-------------------- 1019
Query: 439 KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 498
NE K+ R P+ YN LI + I G V +
Sbjct: 1020 ----NEMKT-------------------------SRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 499 AYDMYKEMLHYGFVCHMFSVLALIKA 524
A +Y E+ G ++F+ ALI+
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRG 1076
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++ +I L GR+ EA+ + + M D P+C YN LI+ +A +
Sbjct: 893 TYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEAD-------AA 945
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
L+ +M + P+ TY ++ C RV+E + + + E GL+P Y+ II+
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 173 FCKNKEMGKALEMKVEM-LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K+ + +AL + EM +GI PD++ Y LI L + EA ++ E+ G+ P
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
T++ L+ Y L G+ + + ++ GF P
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSP 1100
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 199/524 (37%), Gaps = 77/524 (14%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
E ++ N++I L R+ EA + M + P VTYNTL++ KN +
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL---GKNGKIQ- 590
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
+EL+ M + PN T+ + C + V A+ +L M + G P +Y+
Sbjct: 591 ---EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYN 647
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
II KN ++ +A+ +M K ++PD L+ + + +A + L
Sbjct: 648 TIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYN 706
Query: 228 -GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG--------FLPYYVTS------- 271
P ++ L+ + + + ++ G +P S
Sbjct: 707 CADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVS 766
Query: 272 --------------FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 317
P L TYN LI GL + A ++ + PD +Y+ +
Sbjct: 767 GARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826
Query: 318 ISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKA 377
+ + + ++ + FEL EM T+E ++++ S LV +D
Sbjct: 827 LDAYGKSGKIDELFELYKEMS-----------THECEANTITHNIVISGLVKAGNVDDAL 875
Query: 378 EMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILI 437
++ L + P + +Y L++GL K AK+L + C P+ IY+ILI
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCR--PNCAIYNILI 933
Query: 438 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 497
GF G + A M+ RP+ Y++L+ C+ G V
Sbjct: 934 N---------------GFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVD 978
Query: 498 KAYDMYKEMLHYGF----VCHMFSVLALIKALYCDER---YNEM 534
+ +KE+ G VC+ + L K+ +E +NEM
Sbjct: 979 EGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 21/269 (7%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQE-MTD----PDCVTYNTLISAACEAEKNHNLS 106
E ++ N VI L G + +A + + M+D P TY LI ++ + +
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 107 IPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 166
+L+ M PN Y +I F + A + + M ++G+ P +Y
Sbjct: 912 -------QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM-L 225
S ++ C + + L E+ + G+ PDV Y L+I L RL EA LF EM
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
RG++P TY++L+ + G + + +E+ + G P++ T+NALI G
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL--------EPNVFTFNALIRG 1076
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSY 314
+P+ A + + M P+ +Y
Sbjct: 1077 YSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 123/272 (45%), Gaps = 19/272 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNHNLSIPYV 110
+ ++N ++ G+I E + +EM+ +C +T+N +IS +A +
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD------ 873
Query: 111 RIVELYHQ-MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
++LY+ M R+ SP TY +I R+ EA + M + G P+ Y+ +
Sbjct: 874 -ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I+ F K E A + M+ +G+ PD+ Y +L+ LC R+ E F+E+ G+
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
+P Y+ ++ + L +E+ +P L TYN+LI L
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS-------RGITPDLYTYNSLILNLGIA 1045
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
+EA +I + L+P+ +++A+I G+
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGY 1077
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 182/445 (40%), Gaps = 49/445 (11%)
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
++ M R + + TY + + + +++A LR M E G +A SY+ +I
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K++ +A+E+ M+ +G P + Y L+ L +R + L +EM G+ P
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
T+ + G+ ++ + + + +G P +VTY LI LC ++ D
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEG--------CGPDVVTYTVLIDALCTARKLDC 311
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
A E+ M PD V+Y ++ F R+L + EM++ +
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK------------DGH 359
Query: 355 VKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRF 411
V D+ TF+ LV+ C +A L + LP+ +Y L+ GL + R
Sbjct: 360 VPDVV---TFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR--VHRL 414
Query: 412 AKRLLLFYIVAHCLTIPSYIIYDILIEKCA-NNEFKSVVELVKGFRMRGL---------- 460
L LF + P+ Y + I+ + + S +E + + +G+
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 461 ---VNEAARARDT------MLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
+ +A R R+ + P+ YN+++ + G + +A + EM+ G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 512 VCHMFSVLALIKALYCDERYNEMSW 536
+ V +LI LY +R +E +W
Sbjct: 535 EPDVIVVNSLINTLYKADRVDE-AW 558
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 213/500 (42%), Gaps = 69/500 (13%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+++ +I LC R+ +A+++L EM D TY+ LI + +N + + V
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG-RNADAAKGLV-- 335
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
H+M ++ Y C I + +E+A + M GL P A +Y+ +I
Sbjct: 336 ----HEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+C+ K + + E+ VEM + I + YG +++ +C L A ++ +EM+ G P
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
Y TL++ + F + E+ ++G +P + YN+LI GL +R
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG--------IAPDIFCYNSLIIGLSKAKRM 503
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ------KETCWPL 346
DEA L M E L P+ +Y A ISG+ E A + EM + K C L
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 347 DQD------------TNESLVKD--LSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---Y 389
+ S+V L + T++ L+N DK + A ++ + +
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI 623
Query: 390 LPDSVSYCLLLNGLHK-----KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNE 444
PD SY +L+NG K KA+S F + +V LT P+ IIY++L+
Sbjct: 624 APDVFSYGVLINGFSKLGNMQKASSIFDE------MVEEGLT-PNVIIYNMLL------- 669
Query: 445 FKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYK 504
GF G + +A D M + P Y +I +C G++ +A+ ++
Sbjct: 670 --------GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 505 EMLHYGFVCHMFSVLALIKA 524
EM G V F L+
Sbjct: 722 EMKLKGLVPDSFVYTTLVDG 741
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 208/514 (40%), Gaps = 81/514 (15%)
Query: 68 EGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE 123
EG + +A+ + M P Y +LI C + N+ Y +VE+ + V
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC---REKNVRQGYELLVEMKKRNIV-- 414
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
+SP TY +++ C ++ A I++ M G P+ Y+ +I F +N G A+
Sbjct: 415 ISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
+ EM ++GI PD+ Y LI L +R+ EAR EM+ G+ P TY + Y
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVT------------------SFSPSLV-------- 277
EF+ E+ + G LP V S S+V
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 278 -TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 336
TY L++GL + D+A EI R M + PD SY +I+GF ++ ++KA +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI--- 649
Query: 337 MDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDS 393
D+ E L N ++ L+ +C + E A +L + P++
Sbjct: 650 ---------FDEMVEEGLT---PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNA 697
Query: 394 VSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC------------- 440
V+YC +++G K + A+ LF + +P +Y L++ C
Sbjct: 698 VTYCTIIDGYCK--SGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 441 ---------ANNEFKSVVELVKGFRMRGLVNEA-ARARDTMLHRNYRPEGAVYNLLIFDH 490
+ F +++ V F L E R D R +P YN++I
Sbjct: 756 GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL 815
Query: 491 CIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
C GN+ A +++ +M + + + + +L+
Sbjct: 816 CKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 207/498 (41%), Gaps = 82/498 (16%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEK------------ 101
+N++I L R+ EA + L EM + P+ TY IS EA +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 102 ------NHNLSIPYV-------RIVEL---YHQMCVRELSPNETTYRCMIRLFCDRNRVE 145
N L + +++E Y M + + + TY ++ ++V+
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 146 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 205
+A I R M KG++P SY +I+ F K M KA + EM+++G+ P+V Y +L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 206 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
C + +A++L EM ++G+ P TY T+++ YC G+ ++ F L DE+ KG +
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 266 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 325
P SF Y L+ G C + A+ I G + ++A+I+ +
Sbjct: 730 P---DSF-----VYTTLVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFG 780
Query: 326 ELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY 385
+ ELK E+ + D+ N T++ +++ C E E A +L +
Sbjct: 781 KT----ELKTEVLNRLMDGSFDRFGK-------PNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 386 Q---AQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILI----- 437
Q A +P ++Y LLNG K R A+ +F P +I+Y ++I
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDK--MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 438 ------------EKCANN--------EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 477
+ A N + L+ GF G + A + + M+ Y
Sbjct: 888 EGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYI 947
Query: 478 PEGAVYNLLIFDHCIGGN 495
P+ A LI + CI N
Sbjct: 948 PDSATVIELINESCISSN 965
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 157/390 (40%), Gaps = 70/390 (17%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++ ++ L ++ +AE + +EM PD +Y LI+ + S
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS------ 647
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
++ +M L+PN Y ++ FC +E+A +L M+ KGL P+A +Y II
Sbjct: 648 -SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF----------- 221
+CK+ ++ +A + EM KG+ PD Y L+ C + A +F
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASST 766
Query: 222 -------------------QEMLLRGMS--------PGGRTYDTLVEAYCLKGEFSKVFH 254
E+L R M P TY+ +++ C +G
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL----- 821
Query: 255 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 314
E ++ F + P+++TY +L++G R E + ++PD + Y
Sbjct: 822 ---EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 315 SAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE 374
S +I+ F + KA L +M K +D S+ T +L++ +
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNA---VDDGCKLSI-------STCRALLSGFAKV 928
Query: 375 DKAEMALKLR---YQAQYLPDSVSYCLLLN 401
+ E+A K+ + QY+PDS + L+N
Sbjct: 929 GEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 124/570 (21%), Positives = 230/570 (40%), Gaps = 91/570 (15%)
Query: 34 VSPPNVLIPGF--AAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD---PDCVT 88
V P+ L+ F + TE+ L SF+ + LC G +A +V++ M + P
Sbjct: 74 VDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEV 133
Query: 89 YNTLISAACEAEKNHN------------LSIPYV-RIVELYHQMCVRELSPNETTYRCMI 135
+++++ + E + ++ Y+ V ++ EL P + + ++
Sbjct: 134 WSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLL 193
Query: 136 RLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK--NKEMGK------------ 181
NR++ + + M E+ + +Y +I C+ N ++GK
Sbjct: 194 DALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRT 253
Query: 182 -------ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
AL++K M+ KG+ P + Y +LI LC +RL +A+ L EM G+S
Sbjct: 254 ATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313
Query: 235 TYDTLVEAYCLKGEFSKVFH-LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
TY L++ LKG + L E++ G + P + Y+ I + +
Sbjct: 314 TYSLLIDGL-LKGRNADAAKGLVHEMVSHGI------NIKPYM--YDCCICVMSKEGVME 364
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ-------------- 339
+A + GM L P +Y+++I G+ R + +R+ +EL +EM +
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 340 KETCWPLDQDTNESLVKDL------SNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYL 390
K C D D ++VK++ N +++L+ + + A LK +
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 391 PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVV 449
PD Y L+ GL KA R L +V + L P+ Y I +EF S
Sbjct: 485 PDIFCYNSLIIGLS-KAKRMDEARSFLVEMVENGLK-PNAFTYGAFISGYIEASEFASAD 542
Query: 450 ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHY 509
+ VK R G++ P + LI ++C G V +A Y+ M+
Sbjct: 543 KYVKEMRECGVL----------------PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 510 GFVCHMFSVLALIKALYCDERYNEMSWVIR 539
G + + L+ L+ +++ ++ + R
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 231/532 (43%), Gaps = 83/532 (15%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
F +I+ EGR+ A ++L EM D D V YN I + + K + + +
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGK---VDMAW---- 258
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+ +H++ L P+E TY MI + C NR++EAV + + + P +Y+ +I +
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGY 318
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+ +A + KG P V AY ++ L ++ EA +F+EM + +P
Sbjct: 319 GSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNL 377
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
TY+ L++ C G+ F L+D + + G P ++ T N ++ LC Q+ D
Sbjct: 378 STYNILIDMLCRAGKLDTAFELRDSMQKAGLFP--------NVRTVNIMVDRLCKSQKLD 429
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD--TN 351
EA + M + PDE+++ ++I G ++ + A+++ +M LD D TN
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM--------LDSDCRTN 481
Query: 352 E----SLVKDLSNH-------DTFSSLVNDYCAED------------------KAEMALK 382
SL+K+ NH + ++N C+ D K +
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 383 LRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLL-LFYIVAHCLTIPSYIIYDILIE--- 438
+++PD+ SY +L++GL K FA LFY + + Y+I+I+
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAG---FANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 439 KCA--NNEFKSVVEL-VKGFR---------MRGLVNEAARARDTMLHRNYRPEGAVYNLL 486
KC N ++ + E+ KGF + GL ML + + N++
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 487 IFDHCIGG-----NVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 533
I+ I G + +AY + +E++ G ++++ +L+ AL E NE
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 208/498 (41%), Gaps = 57/498 (11%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+ N ++ RLC ++ EA + +EM PD +T+ +LI + + +
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDD-------A 466
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
++Y +M + N Y +I+ F + R E+ I + M + SP + +
Sbjct: 467 YKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
K E K M E+ + PD +Y +LI L E +LF M +G
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLD 586
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
R Y+ +++ +C G+ +K + L +E+ KG F P++VTY ++I GL R
Sbjct: 587 TRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG--------FEPTVVTYGSVIDGLAKIDRL 638
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
DEA + ++ + V YS++I GF ++ + +A+ + E+ QK
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK------------ 686
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATS 409
L +L T++SL++ ++ AL + L P+ V+Y +L+NGL K
Sbjct: 687 GLTPNLY---TWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK--VR 741
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 469
+F K + + + PS I Y +I G G + EA D
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMIS---------------GLAKAGNIAEAGALFD 786
Query: 470 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY--- 526
P+ A YN +I G A+ +++E G H + + L+ L+
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKND 846
Query: 527 CDERYNEMSWVIRNTLRS 544
C E+ + V+R T ++
Sbjct: 847 CLEQAAIVGAVLRETGKA 864
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 41/357 (11%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCV-------TYNTLISAACEAEKNHNLSIP 108
+ + ++IK GR + + ++M + +C TY + A E EK
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR----- 537
Query: 109 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 168
++ ++ R P+ +Y +I E + M E+G +Y+
Sbjct: 538 -----AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 169 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
+I FCK ++ KA ++ EM KG P V YG +I L RL EA LF+E +
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 288
+ Y +L++ + G + + + +E++QKG +P+L T+N+L+ L
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG--------LTPNLYTWNSLLDALVK 704
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 348
+ +EAL + M E+ P++V+Y +I+G ++R+ KAF EM QK+ P
Sbjct: 705 AEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM-QKQGMKP--- 760
Query: 349 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEM-ALKLRYQAQ-YLPDSVSYCLLLNGL 403
+S S L A + AE AL R++A +PDS Y ++ GL
Sbjct: 761 -------STISYTTMISGLAK---AGNIAEAGALFDRFKANGGVPDSACYNAMIEGL 807
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 203/489 (41%), Gaps = 62/489 (12%)
Query: 57 SFNAVIKRLCG---EGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPY 109
S N I+ + G ++RE V+Q M P Y TLI A NH+
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAV--NHS----- 184
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
++ L+ QM P + +IR F RV+ A+ +L M L Y+
Sbjct: 185 DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I F K ++ A + E+ G+ PD Y +I +LC RL EA ++F+ +
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRR 304
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P Y+T++ Y G+F + + L + KG + PS++ YN ++ L
Sbjct: 305 VPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI--------PSVIAYNCILTCLRKM 356
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
+ DEAL++ M + P+ +Y+ +I R +L AFEL+ M QK +P
Sbjct: 357 GKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSM-QKAGLFP---- 410
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLHKK 406
N T + +V+ C K + A + + Y PD +++C L++GL K
Sbjct: 411 ----------NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 407 ATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAAR 466
A ++ + + C T + I+Y L+K F G + +
Sbjct: 461 GRVDDAYKVYEKMLDSDCRT--NSIVY---------------TSLIKNFFNHGRKEDGHK 503
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV--CHMFSVL--ALI 522
M+++N P+ + N + G K M++E+ FV +S+L LI
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 523 KALYCDERY 531
KA + +E Y
Sbjct: 564 KAGFANETY 572
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 189/474 (39%), Gaps = 47/474 (9%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD---PDCVTYNTLISAACEAEKNHNLSIPYVR 111
++++N ++ L G++ EA V +EM P+ TYN LI C A K L +
Sbjct: 343 VIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGK---LDTAF-- 397
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
EL M L PN T M+ C +++EA + M K +P ++ +I
Sbjct: 398 --ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K + A ++ +MLD + Y LI+ + R + ++++M+ + SP
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSP 515
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
+ +T ++ GE K + +E+ + F+P +Y+ LIHGL
Sbjct: 516 DLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP--------DARSYSILIHGLIKAGF 567
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
+E E+ M E D +Y+ VI GF + ++ KA++L EM K + T
Sbjct: 568 ANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKG--FEPTVVTY 625
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRF 411
S++ L+ D D+A M + + + V Y L++G K R
Sbjct: 626 GSVIDGLAKIDRL----------DEAYMLFEEAKSKRIELNVVIYSSLIDGFGK--VGRI 673
Query: 412 AKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTM 471
+ +Y+I + L++K + L+ +NEA +M
Sbjct: 674 DE---------------AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 472 LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
P Y +LI C +KA+ ++EM G S +I L
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 162/404 (40%), Gaps = 48/404 (11%)
Query: 134 MIRLFCDRNRVEEAVGILRLMAEKGLSPH-ADSYSRIISRFCKNKEMGKALEMKVEMLDK 192
++R D NR A+ R + PH +SY+ ++ + + ++ EM
Sbjct: 71 VLRRLKDVNR---AIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVA 127
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G P V+ ++ +L E D+ Q M P Y TL+ G FS V
Sbjct: 128 GFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLI------GAFSAV 181
Query: 253 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 312
H +++ F + P++ + LI G R D AL +L M LD D V
Sbjct: 182 NH--SDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 313 SYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 372
Y+ I F ++ ++ A W + + +K + T++S++ C
Sbjct: 240 LYNVCIDSFGKVGKVDMA-------------WKFFHEIEANGLK--PDEVTYTSMIGVLC 284
Query: 373 AEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPS 429
++ + A+++ + + +P + +Y ++ G + +F + L +IPS
Sbjct: 285 KANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYG--SAGKFDEAYSLLERQRAKGSIPS 342
Query: 430 YIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 489
I Y+ ++ C R G V+EA + + M ++ P + YN+LI
Sbjct: 343 VIAYNCIL-TC--------------LRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDM 386
Query: 490 HCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 533
C G + A+++ M G ++ +V ++ L ++ +E
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 204/514 (39%), Gaps = 98/514 (19%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++ ++ C G I +A EM + P+ VTY LI A +A+K + Y
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK-----VSYAN- 573
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
EL+ M PN TY +I C +VE+A I M P D Y + +
Sbjct: 574 -ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK---Q 629
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ N E P+V YG L+ C R+ EAR L M + G P
Sbjct: 630 YDDNSER----------------PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT---------------------- 270
YD L++ C G+ + ++ E+ + GF T
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 271 -----SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 325
S +P++V Y +I GLC + DEA ++++ M E P+ V+Y+A+I GF I
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 326 ELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC---AEDKAEMALK 382
++ EL M K N+ T+ L++ C A D A L+
Sbjct: 794 KIETCLELLERMGSKGVA---------------PNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 383 LRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCAN 442
Q + + Y ++ G +K+ F + L L + T P +Y +LI+
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNKE----FIESLGLLDEIGQDDTAPFLSVYRLLIDN--- 891
Query: 443 NEFKSVVELVKGFRMR---GLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 499
L+K R+ L+ E A T++ + + YN LI C+ V A
Sbjct: 892 --------LIKAQRLEMALRLLEEVATFSATLVDYS-----STYNSLIESLCLANKVETA 938
Query: 500 YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 533
+ ++ EM G + M S +LIK L+ + + +E
Sbjct: 939 FQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 120/508 (23%), Positives = 205/508 (40%), Gaps = 85/508 (16%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
FN+++ C G A +L++M P V YN LI + C + + N + + +
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL--LDLA 432
Query: 114 E-LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
E Y +M + N+ R C + E+A ++R M +G P +YS++++
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
C +M A + EM G+ DV+ Y +++ C + +AR F EM G +P
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN 552
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT---------------------- 270
TY L+ AY + S L + ++ +G LP VT
Sbjct: 553 VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFE 612
Query: 271 ---------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 309
S P++VTY AL+ G C R +EA ++L M +P
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 310 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 369
+++ Y A+I G ++ +L +A E+K EM E +P + T+SSL++
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEM--SEHGFP-------------ATLYTYSSLID 717
Query: 370 DYCA---EDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLT 426
Y +D A L + P+ V Y +++GL K + A +L+ C
Sbjct: 718 RYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ- 776
Query: 427 IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLL 486
P+ + Y +I+ GF M G + + M + P Y +L
Sbjct: 777 -PNVVTYTAMID---------------GFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 487 IFDHCIGGNVHKAYDMYKEMLHYGFVCH 514
I C G + A+++ +EM + H
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 121/501 (24%), Positives = 210/501 (41%), Gaps = 54/501 (10%)
Query: 65 LCGEGRIREAETVLQ-EMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE 123
LC G+ REA T+++ E PD V Y LIS CEA + ++ ++M
Sbjct: 280 LCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASL-------FEEAMDFLNRMRATS 332
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
PN TY ++ ++ ++ +L +M +G P ++ ++ +C + + A
Sbjct: 333 CLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE------ARDLFQEMLLRGMSPGGRTYD 237
++ +M+ G P Y +LI +C + L A + EML G+
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVS 452
Query: 238 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 297
+ C G++ K F + E+I +GF+P TY+ +++ LC + + A
Sbjct: 453 SFTRCLCSAGKYEKAFSVIREMIGQGFIP--------DTSTYSKVLNYLCNASKMELAFL 504
Query: 298 ILRGMPEMLLDPDEVSYSAVISGFRR---IRELRKAFELKLEMDQKETCWPLDQDTNESL 354
+ M L D +Y+ ++ F + I + RK F E+ C P
Sbjct: 505 LFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG----CTP--------- 551
Query: 355 VKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRF 411
N T+++L++ Y K A +L LP+ V+Y L++G H KA +
Sbjct: 552 -----NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG-HCKA-GQV 604
Query: 412 AKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVV---ELVKGFRMRGLVNEAARAR 468
K +F + +P +Y + N+E +VV L+ GF V EA +
Sbjct: 605 EKACQIFERMCGSKDVPDVDMY--FKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD 528
D M P VY+ LI C G + +A ++ EM +GF +++ +LI +
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 529 ERYNEMSWVIRNTL-RSCNLN 548
+R + S V+ L SC N
Sbjct: 723 KRQDLASKVLSKMLENSCAPN 743
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 172/423 (40%), Gaps = 62/423 (14%)
Query: 37 PNV-----LIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCV 87
PN+ LI G + C + +R+CG + + + ++ D P+ V
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKAC-----QIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
TY L+ C K+H + +L M + PN+ Y +I C +++EA
Sbjct: 641 TYGALLDGFC---KSHRVE----EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEA 693
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
+ M+E G +YS +I R+ K K A ++ +ML+ P+V Y +I
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 753
Query: 208 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 267
LC + EA L Q M +G P TY +++ + + G+ L + + KG P
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Query: 268 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 327
YVT Y LI C D A +L M + Y VI GF + E
Sbjct: 814 YVT--------YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EF 863
Query: 328 RKAFELKLEMDQKETCWPL------------------------DQDTNESLVKDLSNHDT 363
++ L E+ Q +T L + T + + D S+ T
Sbjct: 864 IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSS--T 921
Query: 364 FSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYI 420
++SL+ C +K E A +L + +P+ S+C L+ GL + S+ ++ LLL
Sbjct: 922 YNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR--NSKISEALLLLDF 979
Query: 421 VAH 423
++H
Sbjct: 980 ISH 982
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 143/331 (43%), Gaps = 42/331 (12%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+ ++A+I LC G++ EA+ V EM++ TY++LI + ++ S
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS----- 729
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
++ +M +PN Y MI C + +EA ++++M EKG P+ +Y+ +I
Sbjct: 730 --KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 787
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
F ++ LE+ M KG+ P+ Y +LI C L A +L +EM
Sbjct: 788 GFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 847
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYY----------------------- 268
Y ++E + EF + L DE+ Q P+
Sbjct: 848 HTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLL 905
Query: 269 --VTSFSPSLV----TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
V +FS +LV TYN+LI LC + + A ++ M + + P+ S+ ++I G
Sbjct: 906 EEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLF 965
Query: 323 RIRELRKAFELKLEMDQKETCWPLDQDTNES 353
R ++ +A L + E W ++ T++
Sbjct: 966 RNSKISEALLLLDFISHMEIQWIEEKKTSDG 996
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 163/367 (44%), Gaps = 37/367 (10%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNH 103
K E LV+F +++ C RI +A + ++ P+ VTY TLI C KN
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC---KNR 202
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
+L+ VEL++QM PN TY ++ C+ R +A +LR M ++ + P+
Sbjct: 203 HLN----HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNV 258
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
+++ +I F K ++ +A E+ M+ ++PDV YG LI LC L EAR +F
Sbjct: 259 ITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYL 318
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M G P Y TL+ +C + E+ QKG + + +TY LI
Sbjct: 319 MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV--------ANTITYTVLI 370
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
G C RPD A E+ M PD +Y+ ++ G ++ KA + M ++E
Sbjct: 371 QGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM- 429
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLL 400
D+ N T++ ++ C K E A L + P+ ++Y ++
Sbjct: 430 -------------DI-NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Query: 401 NGLHKKA 407
+G ++
Sbjct: 476 SGFCRRG 482
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 173/379 (45%), Gaps = 44/379 (11%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
P+ T+ ++ +C NR+E+A+ + + G P+ +Y+ +I CKN+ + A+E+
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
+M G P+V Y L+ LC R +A L ++M+ R + P T+ L++A+
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
G+ + L + +IQ S P + TY +LI+GLC + DEA ++ M
Sbjct: 271 VGKLMEAKELYNVMIQ--------MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
P+EV Y+ +I GF + + + ++ EM QK ++N T++
Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV---------------VANTITYT 367
Query: 366 SLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGL-----HKKATSRFA---KR 414
L+ YC + ++A ++ Q + PD +Y +LL+GL +KA F KR
Sbjct: 368 VLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 415 LLLFYIVAHCLTIP----------SYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
+ IV + + I ++ ++ L K + ++ GF RGL++EA
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEA 487
Query: 465 ARARDTMLHRNYRPEGAVY 483
M + P +VY
Sbjct: 488 DSLFKKMKEDGFLPNESVY 506
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 192/460 (41%), Gaps = 71/460 (15%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P + + L+S + + Y ++ L+ QM + + P T ++ C ++
Sbjct: 81 PSIIDFTRLLSVIAKMNR-------YDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQ 133
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
A L M + G P +++ +++ +C + A+ + ++L G P+V Y
Sbjct: 134 PCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTT 193
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
LI+ LC R L A +LF +M G P TY+ LV C G + L +++++
Sbjct: 194 LIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR 253
Query: 264 FLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEAL 296
P +T S P + TY +LI+GLC + DEA
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 297 EILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVK 356
++ M P+EV Y+ +I GF + + + ++ EM QK
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV-------------- 359
Query: 357 DLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRFAK 413
++N T++ L+ YC + ++A ++ Q + PD +Y +LL+GL + K
Sbjct: 360 -VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC--CNGKVEK 416
Query: 414 RLLLF-YIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 472
L++F Y+ + I + + Y I+I+ G G V +A ++
Sbjct: 417 ALMIFEYMRKREMDI-NIVTYTIIIQ---------------GMCKLGKVEDAFDLFCSLF 460
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
+ +P Y +I C G +H+A ++K+M GF+
Sbjct: 461 SKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL 500
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 178/407 (43%), Gaps = 45/407 (11%)
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
HNL + ++L+ +M P+ + ++ + NR + + + M G+ P
Sbjct: 60 HNLQ--FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPL 117
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
+ + ++ C + + +A +M+ G PD+ + L+ CH R+ +A LF
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFD 177
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 282
++L G P TY TL+ C + L +++ G P++VTYNAL
Sbjct: 178 QILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG--------SRPNVVTYNAL 229
Query: 283 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 342
+ GLC R +A +LR M + ++P+ ++++A+I F ++ +L +A EL M Q
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQM-- 287
Query: 343 CWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLL 399
S+ D+ T+ SL+N C D+A L + P+ V Y L
Sbjct: 288 ----------SVYPDVF---TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 400 LNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRG 459
++G K + R + +FY ++ + + I Y +LI+ G+ + G
Sbjct: 335 IHGFCK--SKRVEDGMKIFYEMSQKGVVANTITYTVLIQ---------------GYCLVG 377
Query: 460 LVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
+ A + M R P+ YN+L+ C G V KA +++ M
Sbjct: 378 RPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 130/299 (43%), Gaps = 38/299 (12%)
Query: 47 GKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKN 102
G + +V++NA++ LC GR +A +L++M +P+ +T+ LI A + K
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK- 273
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
+ ELY+ M + P+ TY +I C ++EA + LM G P+
Sbjct: 274 ------LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
Y+ +I FCK+K + +++ EM KG+ + Y +LIQ C R A+++F
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD--------------EVIQKG----- 263
+M R P RTY+ L++ C G+ K + + +I +G
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLG 447
Query: 264 --------FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 314
F + P+++TY +I G C EA + + M E P+E Y
Sbjct: 448 KVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 155/383 (40%), Gaps = 52/383 (13%)
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
SY +I+ N + AL++ M+ P + + L+ ++ R LF++
Sbjct: 49 SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQ 108
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M + G+ P T + ++ CL + + ++++ G F P LVT+ +L+
Sbjct: 109 MQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG--------FEPDLVTFTSLL 160
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
+G C + R ++A+ + + M P+ V+Y+ +I + R L A EL +M
Sbjct: 161 NGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM------ 214
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLL 400
TN S N T+++LV C + A L+ + + P+ +++ L+
Sbjct: 215 -----GTNGS----RPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 401 NGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGL 460
+ K AK L Y+++I+ + + L+ G M GL
Sbjct: 266 DAFVKVGKLMEAKEL-----------------YNVMIQMSVYPDVFTYGSLINGLCMYGL 308
Query: 461 VNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLA 520
++EA + M P +Y LI C V ++ EM G V + +
Sbjct: 309 LDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 521 LIKALYC--------DERYNEMS 535
LI+ YC E +N+MS
Sbjct: 369 LIQG-YCLVGRPDVAQEVFNQMS 390
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 129/538 (23%), Positives = 227/538 (42%), Gaps = 99/538 (18%)
Query: 19 IRGFAAGKATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVL 78
IRGF GK EK L + G + LV++ +I C G++ EA L
Sbjct: 184 IRGFCEGKEL-EKALELANEMKGSGCSWS-------LVTWGILIDAFCKAGKMDEAMGFL 235
Query: 79 QEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCM 134
+EM + D V Y +LI C+ + R L+ ++ R SP TY +
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGE-------LDRGKALFDEVLERGDSPCAITYNTL 288
Query: 135 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 194
IR FC +++EA I M E+G+ P+ +Y+ +I C + +AL++ M++K
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 195 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 254
P+ Y ++I LC + +A ++ + M R P TY+ L+ C KG+
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL----- 403
Query: 255 LQDEVIQKGFLPYYVTSFS-PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 313
DE + +L +S++ P +++YNALIHGLC R +AL+I + E L D V+
Sbjct: 404 --DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Query: 314 YSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCA 373
+ +++ + ++ KA EL W D+ K + N DT++++++ +C
Sbjct: 462 TNILLNSTLKAGDVNKAMEL----------WKQISDS-----KIVRNSDTYTAMIDGFCK 506
Query: 374 -----------------------------------EDKAEMALKLRYQAQ---YLPDSVS 395
E + A +L + Q PD VS
Sbjct: 507 TGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Query: 396 YCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGF 455
+ ++++G K + A+ LL+ ++ P Y LI + F
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVG--MSRAGLSPDLFTYSKLINR---------------F 609
Query: 456 RMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG-GNVHKAYDMYKEMLHYGFV 512
G ++EA D M+ + P+ + + + +CI G K ++ K+++ V
Sbjct: 610 LKLGYLDEAISFFDKMVDSGFEPDAHICD-SVLKYCISQGETDKLTELVKKLVDKDIV 666
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 189/433 (43%), Gaps = 57/433 (13%)
Query: 119 MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 178
M R + N + +++ C +AV +LR M L P SY+ +I FC+ KE
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 179 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 238
+ KALE+ EM G + +G+LI C ++ EA +EM G+ Y +
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTS 252
Query: 239 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 298
L+ +C GE + L DEV+++G SP +TYN LI G C + EA EI
Sbjct: 253 LIRGFCDCGELDRGKALFDEVLERG--------DSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 299 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL 358
M E + P+ +Y+ +I G + + ++A +L M +K D++ N
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK------DEEPNAV----- 353
Query: 359 SNHDTFSSLVNDYCAE----DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKR 414
T++ ++N C + D E+ ++L + + PD+++Y +LL GL K A +
Sbjct: 354 ----TYNIIINKLCKDGLVADAVEI-VELMKKRRTRPDNITYNILLGGLCAKGDLDEASK 408
Query: 415 LLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLH 473
LL + T P I Y+ LI C N +++ D ++
Sbjct: 409 LLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY----------------DLLVE 452
Query: 474 RNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI----------- 522
+ + N+L+ G+V+KA +++K++ V + + A+I
Sbjct: 453 KLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNV 512
Query: 523 -KALYCDERYNEM 534
K L C R +E+
Sbjct: 513 AKGLLCKMRVSEL 525
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 199/437 (45%), Gaps = 57/437 (13%)
Query: 102 NHNLSIPYV-------RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLM 154
NHN+ + + + V L +M L P+ +Y +IR FC+ +E+A+ + M
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 155 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL 214
G S ++ +I FCK +M +A+ EM G+ D+ Y LI+ C L
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 215 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSP 274
+ LF E+L RG SP TY+TL+ +C G+ + + + +I++G P
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERG--------VRP 315
Query: 275 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 334
++ TY LI GLC + EAL++L M E +P+ V+Y+ +I+ + + A E+
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEI- 374
Query: 335 LEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY----QAQYL 390
+E+ +K P ++ T++ L+ CA+ + A KL Y + Y
Sbjct: 375 VELMKKRRTRP--------------DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 391 -PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC--------A 441
PD +SY L++GL K+ +R + L ++ ++ L + +IL+ A
Sbjct: 421 DPDVISYNALIHGLCKE--NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 442 NNEFKSVVE------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 489
+K + + ++ GF G++N A M +P YN L+
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 490 HCIGGNVHKAYDMYKEM 506
C G++ +A+ +++EM
Sbjct: 539 LCKEGSLDQAWRLFEEM 555
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 191/446 (42%), Gaps = 51/446 (11%)
Query: 71 IREAETVLQEMTDPDCVTYNTLISAACEAE-KNHNL---SIPYVR-IVELYHQMCVRELS 125
+R E V++++ +P Y+ L++A E E K +L S P ++ V ++ Q S
Sbjct: 13 LRRDEHVVRKLLNPR--VYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSS 70
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
M +L RN E A R M E + S S ++ + + ++ G A +
Sbjct: 71 LAFAGNNLMAKLVRSRNH-ELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGV 129
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
ML +G +V+ + +L++ LC +A L +EM + P +Y+T++ +C
Sbjct: 130 LALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE 189
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
E K L +E+ G S SLVT+ LI C + DEA+ L+ M M
Sbjct: 190 GKELEKALELANEMKGSG--------CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFM 241
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
L+ D V Y+++I GF EL + L E+ ++ D T++
Sbjct: 242 GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER---------------GDSPCAITYN 286
Query: 366 SLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
+L+ +C + + A + + P+ +Y L++GL ++ A +LL I
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346
Query: 423 HCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 482
P+ + Y+I+I K + GLV +A + M R RP+
Sbjct: 347 D--EEPNAVTYNIIINKLCKD---------------GLVADAVEIVELMKKRRTRPDNIT 389
Query: 483 YNLLIFDHCIGGNVHKAYDMYKEMLH 508
YN+L+ C G++ +A + ML
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLK 415
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 146/343 (42%), Gaps = 45/343 (13%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAAC-EAEKNHNLSIPYV 110
V++N +I +LC +G + +A +++ M T PD +TYN L+ C + + + + Y+
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ + + P+ +Y +I C NR+ +A+ I L+ EK + + + ++
Sbjct: 413 MLKDSSYT------DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILL 466
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ K ++ KA+E+ ++ D I + Y +I C L A+ L +M + +
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-------------------- 270
P Y+ L+ + C +G + + L +E+ + P V+
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESL 586
Query: 271 -------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE------VSYSAV 317
SP L TY+ LI+ DEA+ M + +PD + Y
Sbjct: 587 LVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCIS 646
Query: 318 ISGFRRIREL-RKAFELKLEMDQKETCWPLDQDTNESLVKDLS 359
++ EL +K + + +D++ TC +D N S DL+
Sbjct: 647 QGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLA 689
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 30/217 (13%)
Query: 16 TFRIRGF-AAGKATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREA 74
T I GF G KGL+ V + + + +N ++ LC EG + +A
Sbjct: 498 TAMIDGFCKTGMLNVAKGLLCKMRV---------SELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 75 ETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVE-LYHQMCVRELSPNET 129
+ +EM PD V++N +I + +A ++ E L M LSP+
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD--------IKSAESLLVGMSRAGLSPDLF 600
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
TY +I F ++EA+ M + G P A ++ E K E+ ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Query: 190 LDKGIFPDVHAYGLLIQLLCHQ-------RRLLEARD 219
+DK I D ++ +C+ +RLL D
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTD 697
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 176/389 (45%), Gaps = 44/389 (11%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDP---DCVTYNTLISAACEA---EKNHNLSIPYVR 111
FN ++ + G + + E D ++ LI CEA EK+ +L I
Sbjct: 132 FNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTE 191
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
SPN Y +I C + +E+A + M + GL + +Y+ +I+
Sbjct: 192 F----------GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
KN + EM +M + G+FP+++ Y ++ LC R +A +F EM RG+S
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY+TL+ C + + ++ + D++ G +P+L+TYN LI G C +
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDG--------INPNLITYNTLIDGFCGVGK 353
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
+AL + R + L P V+Y+ ++SGF R + A ++ EM+++
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER--------GIK 405
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKAT 408
S V T++ L++ + D E A++LR + L PD +Y +L++G K
Sbjct: 406 PSKV-------TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQ 458
Query: 409 SRFAKRLLLFYIVAHCLTIPSYIIYDILI 437
A RL + +C P+ +IY+ +I
Sbjct: 459 MNEASRLFKSMVEKNCE--PNEVIYNTMI 485
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 133/259 (51%), Gaps = 19/259 (7%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++N +I LC E ++ EA V+ +M +P+ +TYNTLI C K
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK-------LG 355
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ + L + R LSP+ TY ++ FC + A +++ M E+G+ P +Y+ +I
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
F ++ M KA+++++ M + G+ PDVH Y +LI C + ++ EA LF+ M+ +
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y+T++ YC +G + L E+ +K +P++ +Y +I LC +
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEK--------ELAPNVASYRYMIEVLCKER 527
Query: 291 RPDEALEILRGMPEMLLDP 309
+ EA ++ M + +DP
Sbjct: 528 KSKEAERLVEKMIDSGIDP 546
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 179/395 (45%), Gaps = 58/395 (14%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAAC---EAEKNHNLSIPY 109
SF +IK C G I ++ +L E+T+ P+ V Y TLI C E EK +L
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 110 VRI-------------------------VELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
++ E+Y +M + PN TY C++ C R
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
++A + M E+G+S + +Y+ +I C+ ++ +A ++ +M GI P++ Y L
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
I C +L +A L +++ RG+SP TY+ LV +C KG+ S + E+ ++G
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG- 403
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
PS VTY LI ++A+++ M E+ L PD +YS +I GF
Sbjct: 404 -------IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 325 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL- 383
++ +A L M +K C P N +++++ YC E + ALKL
Sbjct: 457 GQMNEASRLFKSMVEK-NCEP--------------NEVIYNTMILGYCKEGSSYRALKLL 501
Query: 384 --RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLL 416
+ + P+ SY ++ L K+ S+ A+RL+
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 188/404 (46%), Gaps = 44/404 (10%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
++ +I+ C+ +E++ +L + E G SP+ Y+ +I CK E+ KA ++ EM
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 249
G+ + Y +LI L + +++++M G+ P TY+ ++ C G
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 250 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 309
F + DE+ ++G S ++VTYN LI GLC + +EA +++ M ++P
Sbjct: 285 KDAFQVFDEMRERGV--------SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 310 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 369
+ ++Y+ +I GF + +L KA L ++ + + SLV T++ LV+
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSR--------GLSPSLV-------TYNILVS 381
Query: 370 DYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLT 426
+C + A K+ + + P V+Y +L++ + + K + L +
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR--SDNMEKAIQLRLSMEELGL 439
Query: 427 IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLL 486
+P Y +LI GF ++G +NEA+R +M+ +N P +YN +
Sbjct: 440 VPDVHTYSVLIH---------------GFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTM 484
Query: 487 IFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDER 530
I +C G+ ++A + KEM ++ S +I+ L C ER
Sbjct: 485 ILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL-CKER 527
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/475 (25%), Positives = 199/475 (41%), Gaps = 51/475 (10%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+F+ V+ G++R+A VL M +P+ + NT I A + +
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR-------LEKA 296
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ +M V + PN TY CMIR +CD +RVEEA+ +L M KG P SY I+
Sbjct: 297 LRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGY 356
Query: 173 FCKNKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
CK K + + ++ +M + G+ PD Y LI +L EA ++ +G
Sbjct: 357 LCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRI 416
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
Y +V A C +G S+ L +E++ KG P P +VTY A+++G C
Sbjct: 417 DKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP-------PDVVTYTAVVNGFCRLGE 469
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
D+A ++L+ M P+ VSY+A+++G R + +A E+ + M + E W + T
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM-MNMSE-EHWWSPNSITY 527
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRF 411
++ L S + EM LK + P V LLL L + +
Sbjct: 528 SVIMHGLRREGKLSEACDVV-----REMVLK-----GFFPGPVEINLLLQSLCRDGRTHE 577
Query: 412 AKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE-------------------LV 452
A++ + + C I ++ C N+E + + LV
Sbjct: 578 ARKFMEECLNKGC-AINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLV 636
Query: 453 KGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 507
+G + EA MLH+ P Y +I +C G V + ++M+
Sbjct: 637 DTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 176/427 (41%), Gaps = 62/427 (14%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
Y M+ + + + +L LM +G+ +++SR++ + + ++ AL++ M
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 249
G+ P++ I + RL +A + M + G+ P TY+ ++ YC
Sbjct: 269 QRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRV 328
Query: 250 SKVFHLQDEVIQKGFLPYYVTSFS----------------------------PSLVTYNA 281
+ L +++ KG LP V+ ++ P VTYN
Sbjct: 329 EEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 282 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
LIH L DEAL L+ E D++ YSA++ + + +A +L EM K
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 342 TCWPLDQDTNESLVKDLSNHDTFSSLVNDYC---AEDKAEMALKLRYQAQYLPDSVSYCL 398
C P + T++++VN +C DKA+ L++ + + P++VSY
Sbjct: 449 HCPP--------------DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTA 494
Query: 399 LLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMR 458
LLNG+ + S A+ ++ + P+ I Y +++ G R
Sbjct: 495 LLNGMCRTGKSLEAREMM--NMSEEHWWSPNSITYSVIMH---------------GLRRE 537
Query: 459 GLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSV 518
G ++EA M+ + + P NLL+ C G H+A +E L+ G ++ +
Sbjct: 538 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 597
Query: 519 LALIKAL 525
+I
Sbjct: 598 TTVIHGF 604
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 134/296 (45%), Gaps = 26/296 (8%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAAC---EAEKNHNLSI 107
+ ++A++ LC EGR+ EA+ ++ EM PD VTY +++ C E +K
Sbjct: 419 LGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAK---- 474
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
+L M PN +Y ++ C + EA ++ + E SP++ +YS
Sbjct: 475 ------KLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYS 528
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
I+ + ++ +A ++ EM+ KG FP LL+Q LC R EAR +E L +
Sbjct: 529 VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 588
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G + + T++ +C E + D++ Y+ + + TY L+ L
Sbjct: 589 GCAINVVNFTTVIHGFCQNDELDAALSVLDDM--------YLINKHADVFTYTTLVDTLG 640
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
R EA E+++ M +DP V+Y VI + ++ ++ + +M ++ C
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC 696
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 169/411 (41%), Gaps = 77/411 (18%)
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
++ +A+ +L LM G+ P+ + I F + + KAL M GI P+V Y
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+I+ C R+ EA +L ++M +G P +Y T++ C + +V L ++ +
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
+ L P VTYN LIH L DEAL L+ E D++ YSA++
Sbjct: 376 EHGL-------VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 322 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC---AEDKAE 378
+ + +A +L EM K C P + T++++VN +C DKA+
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPP--------------DVVTYTAVVNGFCRLGEVDKAK 474
Query: 379 MALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIE 438
L++ + + P++VSY LLNG+ + S A+ ++ + P+ I Y +++
Sbjct: 475 KLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM--NMSEEHWWSPNSITYSVIMH 532
Query: 439 KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 498
G R G ++EA
Sbjct: 533 ---------------GLRREGKLSEAC--------------------------------- 544
Query: 499 AYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTL-RSCNLN 548
D+ +EM+ GF + L+++L D R +E + L + C +N
Sbjct: 545 --DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 42/319 (13%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLI------SAACEA----- 99
VS+ ++ LC E RI E ++++M PD VTYNTLI A EA
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLK 407
Query: 100 -EKNHNLSIPYVRIVELYHQMC-----------VREL------SPNETTYRCMIRLFCDR 141
+ I + + H +C + E+ P+ TY ++ FC
Sbjct: 408 DAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRL 467
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
V++A +L++M G P+ SY+ +++ C+ + +A EM + P+ Y
Sbjct: 468 GEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITY 527
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+++ L + +L EA D+ +EM+L+G PG + L+++ C G + +E +
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
KG + ++V + +IHG C D AL +L M + D +Y+ ++
Sbjct: 588 KG--------CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTL 639
Query: 322 RRIRELRKAFELKLEMDQK 340
+ + +A EL +M K
Sbjct: 640 GKKGRIAEATELMKKMLHK 658
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 102/234 (43%), Gaps = 24/234 (10%)
Query: 39 VLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDC----VTYNTLIS 94
+++ GF G V N +++ LC +GR EA ++E + C V + T+I
Sbjct: 550 MVLKGFFPGP-------VEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIH 602
Query: 95 AACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLM 154
C+ N L + ++Y + + TY ++ + R+ EA +++ M
Sbjct: 603 GFCQ---NDELDAALSVLDDMY----LINKHADVFTYTTLVDTLGKKGRIAEATELMKKM 655
Query: 155 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV--HAYGLLIQLLCHQR 212
KG+ P +Y +I R+C +MGK ++ V +L+K I Y +I+ LC
Sbjct: 656 LHKGIDPTPVTYRTVIHRYC---QMGKVDDL-VAILEKMISRQKCRTIYNQVIEKLCVLG 711
Query: 213 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
+L EA L ++L +T L+E Y KG + + + + +P
Sbjct: 712 KLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIP 765
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 179/422 (42%), Gaps = 52/422 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
L +++A+I C G +R+A + +E+ P+ V + TL+ C+A + V
Sbjct: 269 LYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE-------LV 321
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
L+ M + PN Y C+I C + EAVG+L M LSP +Y+ +I
Sbjct: 322 TARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ C ++ +A + +M ++ IFP Y LI C + + +A DL EM G+
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVE 441
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T+ TL++ YC + L E+ KG + P +VTY ALI
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV--------PDVVTYTALIDAHFKEA 493
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
EAL + M E + P++ +++ ++ GF + L A + E +Q+ +CW
Sbjct: 494 NMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCW------ 547
Query: 351 NESLVKDLSNHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLLLNG-LHKK 406
NH F+ L+ C +A PD SY +L G L +K
Sbjct: 548 ---------NHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEK 598
Query: 407 ATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC------ANNEFKSVVELVKGFRMRGL 460
R ++L C I + I+ ++L+ + AN KS L R++ +
Sbjct: 599 ---RITDTMML-----QCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTV 650
Query: 461 VN 462
N
Sbjct: 651 SN 652
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 163/368 (44%), Gaps = 33/368 (8%)
Query: 51 TEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYV 110
++ CL N +++R + + + ++ PD Y L + Y
Sbjct: 164 SKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQG-------LYS 216
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ +L +M + PN Y I C N++EEA + LM + G+ P+ +YS +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+CK + +A + E+L + P+V +G L+ C R L+ AR LF M+ G+
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y+ L+ +C G + L E+ + SP + TY LI+GLC
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMES--------LNLSPDVFTYTILINGLCIED 388
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
+ EA + + M + P +Y+++I G+ + + +A +L EM
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM------------- 435
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKA 407
S V+ N TFS+L++ YC + A+ L ++ +PD V+Y L++ K+A
Sbjct: 436 TASGVE--PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEA 493
Query: 408 TSRFAKRL 415
+ A RL
Sbjct: 494 NMKEALRL 501
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 176/460 (38%), Gaps = 77/460 (16%)
Query: 125 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 184
SP+ ++ R R + +LM +GL P Y + K K +
Sbjct: 161 SPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEK 220
Query: 185 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 244
+ EM GI P+V+ Y + I LC ++ EA +F+ M G+ P TY +++ YC
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYC 280
Query: 245 LKGEFSKVFHLQDEVIQKGFLPYYVT---------------------------SFSPSLV 277
G + + L E++ LP V P+L
Sbjct: 281 KTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLY 340
Query: 278 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
YN LIHG C EA+ +L M + L PD +Y+ +I+G ++ +A L +M
Sbjct: 341 VYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
Query: 338 DQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSV 394
+ E +P + T++SL++ YC E E AL L + + P+ +
Sbjct: 401 -KNERIFP--------------SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNII 445
Query: 395 SYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKG 454
++ L++G + A + L++ + +P + Y LI+ FK
Sbjct: 446 TFSTLIDGYCNVRDIKAA--MGLYFEMTIKGIVPDVVTYTALIDA----HFK-------- 491
Query: 455 FRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE-------ML 507
+ EA R ML P + L+ G + A D Y+E
Sbjct: 492 ---EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWN 548
Query: 508 HYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNL 547
H GF C LI+ L C Y + + +RSC +
Sbjct: 549 HVGFTC-------LIEGL-CQNGYILRASRFFSDMRSCGI 580
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 116/470 (24%), Positives = 205/470 (43%), Gaps = 58/470 (12%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+N V+ L GE RI+ V ++M +P+ TYN L+ A C KN+ + +V
Sbjct: 149 YNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALC---KNNKVDGAKKLLV 205
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E+ ++ C P+ +Y +I C+ V+E R +AE+ P Y+ +I+
Sbjct: 206 EMSNKGC----CPDAVSYTTVISSMCEVGLVKEG----RELAER-FEPVVSVYNALINGL 256
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
CK + A E+ EM++KGI P+V +Y LI +LC+ ++ A +ML RG P
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
T +LV+ L+G L +++I +GF P++V YN L+ G C
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMI-RGF------GLQPNVVAYNTLVQGFCSHGNIV 369
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
+A+ + M E+ P+ +Y ++I+GF + L A + +M C + TN
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTN-- 427
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAK 413
+V+ L H F +AE +++ + P ++ + GL +A+
Sbjct: 428 MVEALCRHSKFK----------EAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 414 RLLLFYIVAHCLTIPSYIIYDILIEKCAN-NEFKSVVELVKGFRMRGLVNEAARARDTML 472
++ H P+ + Y+ L++ A N + L + MRG V ++ +T+L
Sbjct: 478 KVFRQMEQQH-RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG-VEWSSSTYNTLL 535
Query: 473 HRN--------------------YRPEGAVYNLLIFDHCIGGNVHKAYDM 502
H + P+ N++I +C G +A M
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 200/467 (42%), Gaps = 83/467 (17%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACE--------- 98
E + ++N ++K LC ++ A+ +L EM++ PD V+Y T+IS+ CE
Sbjct: 178 EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRE 237
Query: 99 -AEKNHNLSIPYVRIV-------------ELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
AE+ + Y ++ EL +M + +SPN +Y +I + C+ ++
Sbjct: 238 LAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGL 203
E A L M ++G P+ + S ++ AL++ +M+ G+ P+V AY
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L+Q C +++A +F M G SP RTY +L+ + +G ++ ++++ G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 264 FLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEAL 296
P V + +PS+ T+NA I GLC R D A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 297 EILRGMPEM-LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP-------LDQ 348
++ R M + P+ V+Y+ ++ G + + +A+ L E+ + W L
Sbjct: 478 KVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHG 537
Query: 349 DTNESL-----------VKDLSNHD--TFSSLVNDYCAEDKAEMALKLR-----YQAQYL 390
N L + D + D T + ++ YC + KAE A ++ + ++
Sbjct: 538 SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWR 597
Query: 391 PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILI 437
PD +SY ++ GL + LL I A +PS + +LI
Sbjct: 598 PDVISYTNVIWGLCRSNCREDGVILLERMISAG--IVPSIATWSVLI 642
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/455 (20%), Positives = 192/455 (42%), Gaps = 52/455 (11%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
++F +I++L +G++ + +LQ+M L + + L+ R VE+
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLA---ERAVEM 133
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
++++ P+ Y ++ NR++ + R M G P+ +Y+ ++ CK
Sbjct: 134 FYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
N ++ A ++ VEM +KG PD +Y +I +C + E R+L + P
Sbjct: 194 NNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER-----FEPVVSV 248
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 295
Y+ L+ C + ++ F L E+++KG SP++++Y+ LI+ LC + + A
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKG--------ISPNVISYSTLINVLCNSGQIELA 300
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
L M + P+ + S+++ G A +L +M + P
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP---------- 350
Query: 356 KDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFA 412
N +++LV +C+ A+ + + + P+ +Y L+NG K+ + A
Sbjct: 351 ----NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 413 KRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTM 471
+ + + C P+ ++Y ++E C +++FK EA + M
Sbjct: 407 VYIWNKMLTSGC--CPNVVVYTNMVEALCRHSKFK----------------EAESLIEIM 448
Query: 472 LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
N P +N I C G + A ++++M
Sbjct: 449 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 133/318 (41%), Gaps = 46/318 (14%)
Query: 38 NVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLI 93
N +I GF + +V++N +++ C G I +A +V M + P+ TY +LI
Sbjct: 340 NQMIRGFG-----LQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 94 SAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRL 153
+ K +L V ++++M PN Y M+ C ++ +EA ++ +
Sbjct: 395 NGF---AKRGSLD----GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEI 447
Query: 154 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG-IFPDVHAYGLLIQLLCHQR 212
M+++ +P +++ I C + A ++ +M + P++ Y L+ L
Sbjct: 448 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN 507
Query: 213 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-- 270
R+ EA L +E+ +RG+ TY+TL+ C G L +++ G P +T
Sbjct: 508 RIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMN 567
Query: 271 ---------------------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
+ P +++Y +I GLC ++ + +L M
Sbjct: 568 MIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMI 627
Query: 304 EMLLDPDEVSYSAVISGF 321
+ P ++S +I+ F
Sbjct: 628 SAGIVPSIATWSVLINCF 645
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 28/203 (13%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+FNA IK LC GR+ AE V ++M P+ VTYN L+ +A R
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKAN----------R 508
Query: 112 IVELY---HQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 168
I E Y ++ +R + + +TY ++ C+ A+ ++ M G SP + +
Sbjct: 509 IEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNM 568
Query: 169 IISRFCKNKEMGKALEMKVEMLD------KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
II +CK GKA E +MLD + PDV +Y +I LC + L +
Sbjct: 569 IILAYCKQ---GKA-ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624
Query: 223 EMLLRGMSPGGRTYDTLVEAYCL 245
M+ G+ P T+ L+ + L
Sbjct: 625 RMISAGIVPSIATWSVLINCFIL 647
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 140/385 (36%), Gaps = 84/385 (21%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
T+ MIR +V+ +L+ M +G D + +IS + + +A+EM +
Sbjct: 78 TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 249
+ G P V Y ++ L + R+ ++++M G
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG--------------------- 176
Query: 250 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 309
F P++ TYN L+ LC + D A ++L M P
Sbjct: 177 ----------------------FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 214
Query: 310 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 369
D VSY+ VIS + +++ EL + E +V +++L+N
Sbjct: 215 DAVSYTTVISSMCEVGLVKEGRELA--------------ERFEPVV------SVYNALIN 254
Query: 370 DYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLT 426
C E + A +L + P+ +SY L+N L A L
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT--------- 305
Query: 427 IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHR-NYRPEGAVYNL 485
+L C N + ++ LVKG +RG +A + M+ +P YN
Sbjct: 306 -------QMLKRGCHPNIY-TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 486 LIFDHCIGGNVHKAYDMYKEMLHYG 510
L+ C GN+ KA ++ M G
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIG 382
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 157/366 (42%), Gaps = 66/366 (18%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V +N +I LC ++ A +L M PD VTYN+LIS C + + + +
Sbjct: 186 VVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT---- 241
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
R+V M RE+ P+ T+ +I RV EA M + L P +YS +I
Sbjct: 242 RMVSC---MTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
C + +A EM M+ KG FPDV Y +LI C +++ LF EM RG+
Sbjct: 299 YGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
TY L++ YC G+ + V ++ F P+++TYN L+HGLC
Sbjct: 359 RNTVTYTILIQGYCRAGKLN--------VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
+ ++AL IL M + +D D V+Y+ +I G + E+ A+++
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI----------------- 453
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR 410
YC+ + + +PD +Y ++ GL+KK R
Sbjct: 454 --------------------YCSLNCQGL----------MPDIWTYTTMMLGLYKKGLRR 483
Query: 411 FAKRLL 416
A L
Sbjct: 484 EADALF 489
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 188/446 (42%), Gaps = 50/446 (11%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P ++ L+SA + +K Y ++ L+ QM + + N T ++ FC ++
Sbjct: 79 PSIADFSRLLSAISKMKK-------YDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQ 131
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ A+ L M + G P ++ +++ FC+ + AL M +M+ G P+V Y
Sbjct: 132 LSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
+I LC +++ A DL M G+ P TY++L+ C G +S + + ++
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKR- 250
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
P + T+NALI R EA E M LDPD V+YS +I G
Sbjct: 251 -------EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
L +A E+ M K C+P + T+S L+N YC K E +KL
Sbjct: 304 YSRLDEAEEMFGFMVSK-GCFP--------------DVVTYSILINGYCKSKKVEHGMKL 348
Query: 384 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC 440
Q + ++V+Y +L+ G + A+ + F + C P+ I Y++L+
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEI--FRRMVFCGVHPNIITYNVLLHGL 406
Query: 441 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY 500
+N G + +A M + YN++I C G V A+
Sbjct: 407 CDN---------------GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 501 DMYKEMLHYGFVCHMFSVLALIKALY 526
D+Y + G + +++ ++ LY
Sbjct: 452 DIYCSLNCQGLMPDIWTYTTMMLGLY 477
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 138/289 (47%), Gaps = 19/289 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++N++I LC GR +A ++ MT PD T+N LI A + +
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE---- 276
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E Y +M R L P+ TY +I C +R++EA + M KG P +YS +I
Sbjct: 277 ---EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ +CK+K++ +++ EM +G+ + Y +LIQ C +L A ++F+ M+ G+
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY+ L+ C G+ K + ++ + G +VTYN +I G+C
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNG--------MDADIVTYNIIIRGMCKAG 445
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 339
+A +I + L PD +Y+ ++ G + R+A L +M +
Sbjct: 446 EVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 156/360 (43%), Gaps = 37/360 (10%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
L + N ++ C ++ A + L +M +P VT+ +L++ C ++ ++
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD------ 169
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ ++ QM PN Y +I C +V+ A+ +L M + G+ P +Y+ +I
Sbjct: 170 -ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
S C + A M M + I+PDV + LI + R+ EA + ++EM+ R +
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY L+ C+ + + ++ KG P +VTY+ LI+G C +
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCF--------PDVVTYSILINGYCKSK 340
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
+ + +++ M + + + V+Y+ +I G+ R +L A E+ M
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM------------- 387
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKA 407
N T++ L++ C K E AL + Q D V+Y +++ G+ K
Sbjct: 388 --VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG 445
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 109/217 (50%), Gaps = 13/217 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEK-NHNLSIPY 109
+V+++ +I LC R+ EAE + M PD VTY+ LI+ C+++K H +
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM---- 346
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
+L+ +M R + N TY +I+ +C ++ A I R M G+ P+ +Y+ +
Sbjct: 347 ----KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVL 402
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
+ C N ++ KAL + +M G+ D+ Y ++I+ +C + +A D++ + +G+
Sbjct: 403 LHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGL 462
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
P TY T++ KG + L ++ + G LP
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 175/392 (44%), Gaps = 50/392 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
L SF +I C R+ A + L +M +P VT+ +L++ C + +
Sbjct: 114 LYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR-------FY 166
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ L Q+ PN Y +I C++ +V A+ +L+ M + G+ P +Y+ +I
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+R + G + + +M+ GI PDV + LI + + +LLEA+ + EM+ R ++
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY++L+ C+ G + + + ++ KGF P+ VTYN LI+G C +
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF--------PNAVTYNTLINGYCKAK 338
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW--PLDQ 348
R D+ ++IL M +D D +Y+ + G+ + + A ++ + + +C P D
Sbjct: 339 RVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV---LGRMVSCGVHP-DM 394
Query: 349 DTNESLVKDLSNHD----------------------TFSSLVNDYCAEDKAEMALKLRYQ 386
T L+ L +H T++ ++ C DK E A L
Sbjct: 395 YTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCS 454
Query: 387 ---AQYLPDSVSYCLLLNGLHKKATSRFAKRL 415
PD ++Y ++ GL +K R A L
Sbjct: 455 LALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 151/327 (46%), Gaps = 40/327 (12%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLIS----AACEAEKNH 103
E +V +N +I LC +G++ A VL+ M PD VTYN+LI+ +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 104 NLS-----------IPYVRIVELY-------------HQMCVRELSPNETTYRCMIRLFC 139
LS I + ++++Y ++M R ++PN TY +I C
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 140 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 199
++EA +L ++ KG P+A +Y+ +I+ +CK K + +++ M G+ D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
Y L Q C + A + M+ G+ P T++ L++ C G+ K ++ E
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL-VRLED 419
Query: 260 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
+QK + ++TYN +I GLC + ++A + + + PD ++Y ++
Sbjct: 420 LQK-------SKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMI 472
Query: 320 GFRRIRELRKAFELKLEMDQKETCWPL 346
G RR R R+A EL +M +++ P+
Sbjct: 473 GLRRKRLWREAHELYRKMQKEDGLMPI 499
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 180/434 (41%), Gaps = 44/434 (10%)
Query: 106 SIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
SI + + L+ M P+ + ++ N+ E + + R + G+S S
Sbjct: 57 SIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYS 116
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
++ +I FC+ + AL +M+ G P + +G L+ CH R EA L +++
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
G P Y+T++++ C KG+ + + + + G P +VTYN+LI
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMG--------IRPDVVTYNSLITR 228
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
L + IL M M + PD +++SA+I + + +L +A + EM Q+
Sbjct: 229 LFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS---- 284
Query: 346 LDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNG 402
N ++V T++SL+N C D+A+ L + + P++V+Y L+NG
Sbjct: 285 ----VNPNIV-------TYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 403 LHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVN 462
K ++L ++ + + + L +G+ G +
Sbjct: 334 YCKAKRVDDGMKILC-----------------VMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 463 EAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI 522
A + M+ P+ +N+L+ C G + KA +++ V + + +I
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIII 436
Query: 523 KALYCDERYNEMSW 536
K L C E +W
Sbjct: 437 KGL-CKADKVEDAW 449
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 123/504 (24%), Positives = 212/504 (42%), Gaps = 69/504 (13%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
S N ++ R G+ + + ++M P TYN +I C+ + R
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEG-----DVEAAR- 282
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
L+ +M R L P+ TY MI F R+++ V M + P +Y+ +I+
Sbjct: 283 -GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINC 341
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
FCK ++ LE EM G+ P+V +Y L+ C + + +A + +M G+ P
Sbjct: 342 FCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPN 401
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
TY +L++A C G S F L +E++Q G ++VTY ALI GLC +R
Sbjct: 402 EYTYTSLIDANCKIGNLSDAFRLGNEMLQVG--------VEWNVVTYTALIDGLCDAERM 453
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET---------- 342
EA E+ M + P+ SY+A+I GF + + + +A EL E+ +
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 343 CWPL------------DQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL 390
W L + E +K +N +++L++ Y L L + + L
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIK--ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKEL 571
Query: 391 P---DSVSYCLLLNGLHK-----KATSRFAKRLLLFYIVAHCLTIPSYI----------- 431
V++C+L++GL K KA F + F + A+ + I
Sbjct: 572 DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEA 631
Query: 432 ---IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIF 488
+++ +++K + + L+ G +G V EA RD M + + Y L++
Sbjct: 632 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 691
Query: 489 --DHCIGGNVHKAYDMYKEMLHYG 510
HC + KA +EM+ G
Sbjct: 692 GLSHC--NQLQKARSFLEEMIGEG 713
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 165/381 (43%), Gaps = 43/381 (11%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++N++I GR+ + +EM D PD +TYN LI+ C+ K L I
Sbjct: 298 VTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK---LPIG--- 351
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+E Y +M L PN +Y ++ FC +++A+ M GL P+ +Y+ +I
Sbjct: 352 -LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
CK + A + EML G+ +V Y LI LC R+ EA +LF +M G+ P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
+Y+ L+ + + L +E+ +G P L+ Y I GLC ++
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRG--------IKPDLLLYGTFIWGLCSLEK 522
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRR-------IRELRKAFELKLEMDQKETCW 344
+ A ++ M E + + + Y+ ++ + + + L + EL +E+ C
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCV 582
Query: 345 PLDQDTNESLVKDL--------------SNHDTFSSLVNDYCAEDKAEMALKL---RYQA 387
+D LV +N F+++++ C +++ E A L Q
Sbjct: 583 LIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Query: 388 QYLPDSVSYCLLLNGLHKKAT 408
+PD +Y L++G K+
Sbjct: 643 GLVPDRTAYTSLMDGNFKQGN 663
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 20/291 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+VS++ ++ C EG +++A +M P+ TY +LI A C K NLS +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC---KIGNLSDAF- 422
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
L ++M + N TY +I CD R++EA + M G+ P+ SY+ +I
Sbjct: 423 ---RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
F K K M +ALE+ E+ +GI PD+ YG I LC ++ A+ + EM G+
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIK 539
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
Y TL++AY G ++ HL DE+ + ++VT+ LI GLC +
Sbjct: 540 ANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE--------LDIEVTVVTFCVLIDGLCKNK 591
Query: 291 RPDEALEIL-RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+A++ R + L + ++A+I G + ++ A L +M QK
Sbjct: 592 LVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK 642
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 184/462 (39%), Gaps = 76/462 (16%)
Query: 73 EAETVLQEM--TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETT 130
+A +VL+EM + DC ++ L S +CV P
Sbjct: 160 DANSVLKEMVLSKADCDVFDVLWST---------------------RNVCV----PGFGV 194
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK---V 187
+ + + D +EEA+ M + P S + ++ RF K +GK ++K
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAK---LGKTDDVKRFFK 251
Query: 188 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
+M+ G P V Y ++I +C + + AR LF+EM RG+ P TY+++++
Sbjct: 252 DMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG----- 306
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 307
F KV L D V F P ++TYNALI+ C F + LE R M L
Sbjct: 307 -FGKVGRLDDTVCF--FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 308 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSL 367
P+ VSYS ++ F + +++A + ++M + V + N T++SL
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRR---------------VGLVPNEYTYTSL 408
Query: 368 VNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHC 424
++ C A +L Q + V+Y L++GL + A+ LF +
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE--LFGKMDTA 466
Query: 425 LTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYN 484
IP+ Y+ LI GF ++ A + + R +P+ +Y
Sbjct: 467 GVIPNLASYNALIH---------------GFVKAKNMDRALELLNELKGRGIKPDLLLYG 511
Query: 485 LLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
I+ C + A + EM G + L+ A +
Sbjct: 512 TFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 139/327 (42%), Gaps = 55/327 (16%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNH 103
+ E +V++ A+I LC R++EAE + +M P+ +YN LI +A KN
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA-KNM 488
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
+ R +EL +++ R + P+ Y I C ++E A ++ M E G+ ++
Sbjct: 489 D------RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 164 -------DSYSR----------------------------IISRFCKNKEMGKALEMKVE 188
D+Y + +I CKNK + KA++
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 189 ML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
+ D G+ + + +I LC ++ A LF++M+ +G+ P Y +L++ +G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 307
+ L+D++ + G L+ Y +L+ GL + +A L M +
Sbjct: 663 NVLEALALRDKMAEIG--------MKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Query: 308 DPDEVSYSAVISGFRRIRELRKAFELK 334
PDEV +V+ + + +A EL+
Sbjct: 715 HPDEVLCISVLKKHYELGCIDEAVELQ 741
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 206/508 (40%), Gaps = 63/508 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
L +++ I C ++ A +L +M P VT N+L++ C +
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR-------IS 162
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
V L QM P+ T+ ++ N+ EAV ++ M KG P +Y +I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ CK E AL + +M I DV Y +I LC + + +A DLF +M +G+
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY+ L+ C G +S L ++++K + +P LV +NALI F
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEK--------NINPDLVFFNALIDA---FV 331
Query: 291 RPDEALEILRGMPEMLLD----PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 346
+ + +E + EM+ PD V+Y+ +I GF + + + + E+ EM Q+
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGL---- 387
Query: 347 DQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGL 403
+ N T+++L++ + D A+M K PD ++Y +LL+GL
Sbjct: 388 -----------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 404 HKKATSRFA--------KRLLLFYIVAHCLTIPS----------YIIYDILIEKCANNEF 445
A KR + IV + I + + ++ L K
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 446 KSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 505
+ ++ GF +GL EA M P YN LI G+ + ++ KE
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKE 556
Query: 506 MLHYGFVCHMFSVLALIKALYCDERYNE 533
M GF S L+ + D R ++
Sbjct: 557 MRSCGFAGDA-STFGLVTNMLHDGRLDK 583
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 184/445 (41%), Gaps = 44/445 (9%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ L+ M P+ + ++ N+ + + + M G+S + +YS I+
Sbjct: 60 IGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINY 119
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
FC+ ++ AL + +M+ G P + L+ CH R+ EA L +M+ G P
Sbjct: 120 FCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPD 179
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
T+ TLV + S+ L + ++ KG P LVTY A+I+GLC P
Sbjct: 180 TVTFTTLVHGLFQHNKASEAVALVERMVVKG--------CQPDLVTYGAVINGLCKRGEP 231
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
D AL +L M + ++ D V Y+ +I G + + + AF+L +M+ K
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK------------ 279
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
+ D+ ++ S + +Y A L + PD V + L++ K+ A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 413 KRLLLFYIVA-HCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAA----- 465
++L + + HC P + Y+ LI+ C + +E+ + RGLV
Sbjct: 340 EKLYDEMVKSKHCF--PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 466 -----RARD---------TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
+ARD M+ P+ YN+L+ C GNV A +++ M
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 457
Query: 512 VCHMFSVLALIKALYCDERYNEMSW 536
+ + +I+AL C E W
Sbjct: 458 KLDIVTYTTMIEAL-CKAGKVEDGW 481
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 160/386 (41%), Gaps = 47/386 (12%)
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
D + + ++ ++ A+ + +M+ FP + + L+ + + L ++
Sbjct: 41 DCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQ 100
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M G+S TY + +C + + S + ++++ G + PS+VT N+L+
Sbjct: 101 MQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG--------YGPSIVTLNSLL 152
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
+G C R EA+ ++ M EM PD V+++ ++ G + + +A L M K C
Sbjct: 153 NGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GC 211
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLL 400
P DL T+ +++N C + ++AL L + + D V Y ++
Sbjct: 212 QP-----------DLV---TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 401 NGL-------------HKKATSRFAKRLLLFYIVAHCL------TIPSYIIYDILIEKCA 441
+GL +K T + + + CL + S ++ D+L EK
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML-EKNI 316
Query: 442 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNY-RPEGAVYNLLIFDHCIGGNVHKAY 500
N + L+ F G + EA + D M+ + P+ YN LI C V +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 501 DMYKEMLHYGFVCHMFSVLALIKALY 526
++++EM G V + + LI +
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFF 402
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 94/231 (40%), Gaps = 33/231 (14%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++N +IK C R+ E V +EM+ + VTY TLI +A N + +
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 111 RIVE----------------------------LYHQMCVRELSPNETTYRCMIRLFCDRN 142
++V ++ M R++ + TY MI C
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
+VE+ + ++ KG+ P+ +Y+ ++S FC+ +A + VEM + G P+ Y
Sbjct: 476 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYN 535
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 253
LI+ + +L +EM G + T+ LV G K F
Sbjct: 536 TLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-GLVTNMLHDGRLDKSF 585
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 155/337 (45%), Gaps = 39/337 (11%)
Query: 84 PDCVTYNTLISA-ACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
PD VT+ TL++ CE L++ R+VE HQ Y +I C
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALAL-VDRMVEEGHQ-----------PYGTIINGLCKMG 55
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
E A+ +L M E + H Y+ II R CK+ A + EM DKGIFPDV Y
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
+I C R +A L ++M+ R ++P T+ L+ A +G+ S+ + +++++
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
G P+ +TYN++I G C R ++A +L M PD V++S +I+G+
Sbjct: 176 GIF--------PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Query: 323 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEM 379
+ + + E+ EM ++ ++N T+++L++ +C D A+
Sbjct: 228 KAKRVDNGMEIFCEMHRRGI---------------VANTVTYTTLIHGFCQVGDLDAAQD 272
Query: 380 ALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLL 416
L + + P+ +++ +L L K R A +L
Sbjct: 273 LLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAIL 309
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 36/315 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAAC---EAEKNHNL------ 105
+V+F ++ LC EGR+ +A ++ M + Y T+I+ C + E NL
Sbjct: 10 VVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEE 69
Query: 106 ------SIPYVRIVE-------------LYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 146
+ Y I++ L+ +M + + P+ TY MI FC R +
Sbjct: 70 THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTD 129
Query: 147 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 206
A +LR M E+ ++P ++S +I+ K ++ +A E+ +ML +GIFP Y +I
Sbjct: 130 AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMID 189
Query: 207 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
C Q RL +A+ + M + SP T+ TL+ YC + E+ ++G +
Sbjct: 190 GFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV- 248
Query: 267 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 326
+ VTY LIHG C D A ++L M + P+ +++ ++++ +E
Sbjct: 249 -------ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301
Query: 327 LRKAFELKLEMDQKE 341
LRKAF + ++ + E
Sbjct: 302 LRKAFAILEDLQKSE 316
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 123/305 (40%), Gaps = 47/305 (15%)
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M+ G P T+ TL+ C +G + L D ++++G PY +I
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPY------------GTII 48
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
+GLC + AL +L M E + V Y+A+I + A L EM K
Sbjct: 49 NGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK--- 105
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLL 400
+ D+ T+S +++ +C + AE L+ + Q PD V++ L+
Sbjct: 106 ---------GIFPDVI---TYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALI 153
Query: 401 NGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGL 460
N L K+ A+ + + + P+ I Y+ +I+ GF +
Sbjct: 154 NALVKEGKVSEAEEI--YGDMLRRGIFPTTITYNSMID---------------GFCKQDR 196
Query: 461 VNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLA 520
+N+A R D+M ++ P+ ++ LI +C V +++ EM G V + +
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 521 LIKAL 525
LI
Sbjct: 257 LIHGF 261
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 155/352 (44%), Gaps = 46/352 (13%)
Query: 1 MKLLLRVSFTVATLKTFRIRGFAAGKATTE--------KGLVSPPNVLIPGFAAGKATTE 52
MKL R S + TL + + GF G E G PNV+I
Sbjct: 141 MKLGFRPS--IVTLGSL-LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI----------- 186
Query: 53 KCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIP 108
+N VI LC + A V M D VTYNTLIS + +
Sbjct: 187 -----YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR------- 234
Query: 109 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 168
+ L M R++ PN + +I F + EA + + M + + P+ +Y+
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNS 294
Query: 169 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
+I+ FC + +G A M M+ KG FPDV Y LI C +R+ + LF EM +G
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 288
+ TY+TL+ YC G+ + V QK F SP +VTYN L+ LC
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLN--------VAQKVFNRMVDCGVSPDIVTYNILLDCLCN 406
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+ ++AL ++ + + +D D ++Y+ +I G R +L++A+ L + +K
Sbjct: 407 NGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK 458
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 174/410 (42%), Gaps = 50/410 (12%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P VT +L++ C+ + + V L M PN Y +I C
Sbjct: 147 PSIVTLGSLLNGFCQGNR-------FQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 199
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ A+ + M +KG+ A +Y+ +IS + A + +M+ + I P+V +
Sbjct: 200 LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 259
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
LI + LLEAR+L++EM+ R + P TY++L+ +C+ G ++ D ++ KG
Sbjct: 260 LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 319
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
P +VTYN LI G C +R ++ +++ M L D +Y+ +I G+ +
Sbjct: 320 CF--------PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ 371
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
KL + QK +D + +V T++ L++ C K E AL +
Sbjct: 372 AG--------KLNVAQKVFNRMVDCGVSPDIV-------TYNILLDCLCNNGKIEKALVM 416
Query: 384 ---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC 440
+++ D ++Y +++ GL + T + + LF + P I Y
Sbjct: 417 VEDLQKSEMDVDIITYNIIIQGLCR--TDKLKEAWCLFRSLTRKGVKPDAIAY------- 467
Query: 441 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDH 490
+ ++ G +GL EA + M + P +Y+ + DH
Sbjct: 468 --------ITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 161/387 (41%), Gaps = 48/387 (12%)
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
+ ++A + M + P ++R+++ K + + + +M + GI D++++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
+LI C RL A L +M+ G P T +L+ +C F + L D +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
GF+ P++V YN +I+GLC + + ALE+ M + + D V+Y+ +ISG
Sbjct: 179 GFV--------PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 323 R-------IRELRKAFELKLEMDQKETCWPLDQDTNE-------SLVKDL------SNHD 362
R LR + K++ + +D E +L K++ N
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 363 TFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFY 419
T++SL+N +C A+ L PD V+Y L+ G K + R + LF
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCK--SKRVEDGMKLFC 348
Query: 420 IVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 479
+ + + Y+ LI G+ G +N A + + M+ P+
Sbjct: 349 EMTYQGLVGDAFTYNTLIH---------------GYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 480 GAVYNLLIFDHCIGGNVHKAYDMYKEM 506
YN+L+ C G + KA M +++
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDL 420
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/527 (23%), Positives = 213/527 (40%), Gaps = 92/527 (17%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT-----DPDCVTYNTLISAACEAEKNHNLSIPYVR 111
+FN ++ C EG++ +A +L+ M +PD VTYNT++ A + + +L
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLK----- 260
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
EL M L PN TY ++ +C ++EA I+ LM + + P +Y+ +I+
Sbjct: 261 --ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILIN 318
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML------ 225
C M + LE+ M + PDV Y LI LEAR L ++M
Sbjct: 319 GLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKA 378
Query: 226 ------------------------------LRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 255
+ G SP TY TL++AY G+ S +
Sbjct: 379 NQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438
Query: 256 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 315
E+ QKG + +T N ++ LC ++ DEA +L + DEV+Y
Sbjct: 439 MREMGQKGI--------KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYG 490
Query: 316 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 375
+I GF R ++ KA E+ EM + VK TF+SL+ C
Sbjct: 491 TLIMGFFREEKVEKALEMWDEMKK---------------VKITPTVSTFNSLIGGLCHHG 535
Query: 376 KAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYII 432
K E+A++ ++ LPD ++ ++ G K+ R K ++
Sbjct: 536 KTELAMEKFDELAESGLLPDDSTFNSIILGYCKEG--RVEK---------------AFEF 578
Query: 433 YDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCI 492
Y+ I+ + + L+ G G+ +A +T++ + YN +I C
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCK 637
Query: 493 GGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 539
+ +AYD+ EM G F+ + I L D + +E +++
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 23/291 (7%)
Query: 56 VSFNAVIKRLCGEGRIREAET-VLQEMTD-----PDCVTYNTLISAACEAEKNHNLSIPY 109
V+ N +K LC E + REA T ++E+ D PD VTY+TLI A K +LS
Sbjct: 381 VTHNISLKWLCKEEK-REAVTRKVKELVDMHGFSPDIVTYHTLIKAYL---KVGDLS--- 433
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
+E+ +M + + N T ++ C +++EA +L ++G +Y +
Sbjct: 434 -GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I F + +++ KALEM EM I P V + LI LCH + A + F E+ G+
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P T+++++ YC +G K F +E I+ SF P T N L++GLC
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKH--------SFKPDNYTCNILLNGLCKE 604
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
++AL + E + D V+Y+ +IS F + ++L++A++L EM++K
Sbjct: 605 GMTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEK 654
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 134/284 (47%), Gaps = 20/284 (7%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
L ++N +I LC G +RE ++ M PD VTYNTLI E LS+
Sbjct: 310 LCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL----GLSLEAR 365
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAV-GILRLMAEKGLSPHADSYSRI 169
+++E QM + N+ T+ ++ C + E + L+ G SP +Y +
Sbjct: 366 KLME---QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I + K ++ ALEM EM KGI + ++ LC +R+L EA +L RG
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
TY TL+ + + + K + DE+ + +P++ T+N+LI GLC
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKK--------VKITPTVSTFNSLIGGLCHH 534
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
+ + A+E + E L PD+ +++++I G+ + + KAFE
Sbjct: 535 GKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 191/459 (41%), Gaps = 51/459 (11%)
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
T+N L++ C K + R+V + +++P+ TY +++ + R+ +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEF------KVNPDNVTYNTILKAMSKKGRLSDL 259
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
+L M + GL P+ +Y+ ++ +CK + +A ++ M + PD+ Y +LI
Sbjct: 260 KELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILING 319
Query: 208 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 267
LC+ + E +L M + P TY+TL++ G + L +++ G
Sbjct: 320 LCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDG---- 375
Query: 268 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML-LDPDEVSYSAVISGFRRIRE 326
+ VT+N + LC ++ + ++ + +M PD V+Y +I + ++ +
Sbjct: 376 ----VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 327 LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKL 383
L A E+ EM QK N T +++++ C E D+A L
Sbjct: 432 LSGALEMMREMGQKGIKM---------------NTITLNTILDALCKERKLDEAHNLLNS 476
Query: 384 RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANN 443
++ ++ D V+Y L+ G ++ + K L ++ + P+ ++
Sbjct: 477 AHKRGFIVDEVTYGTLIMGFFRE--EKVEKALEMWDEMKKVKITPTVSTFN--------- 525
Query: 444 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
L+ G G A D + P+ + +N +I +C G V KA++ Y
Sbjct: 526 ------SLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579
Query: 504 KEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTL 542
E + + F ++ L+ L C E E + NTL
Sbjct: 580 NESIKHSFKPDNYTCNILLNGL-CKEGMTEKALNFFNTL 617
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 148/325 (45%), Gaps = 58/325 (17%)
Query: 217 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF--SP 274
AR++F +M+ G+S +T++ LV YCL+G+ L+D + G L V+ F +P
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGK------LEDAL---GMLERMVSEFKVNP 238
Query: 275 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 334
VTYN ++ + R + E+L M + L P+ V+Y+ ++ G+ ++ L++AF++
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI- 297
Query: 335 LEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---P 391
+E+ ++ P DL T++ L+N C L+L + L P
Sbjct: 298 VELMKQTNVLP-----------DLC---TYNILINGLCNAGSMREGLELMDAMKSLKLQP 343
Query: 392 DSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVEL 451
D V+Y L++G + S A++L+ E+ N+ K+ ++
Sbjct: 344 DVVTYNTLIDGCFELGLSLEARKLM---------------------EQMENDGVKA-NQV 381
Query: 452 VKGFRMRGLVNEAAR------ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 505
++ L E R ++ + + P+ Y+ LI + G++ A +M +E
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 506 MLHYGFVCHMFSVLALIKALYCDER 530
M G + ++ ++ AL C ER
Sbjct: 442 MGQKGIKMNTITLNTILDAL-CKER 465
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 79/171 (46%), Gaps = 12/171 (7%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN++I LC G+ A E+ + PD T+N++I C+ + +
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVE-------KA 575
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
E Y++ P+ T ++ C E+A+ + E+ +Y+ +IS
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISA 634
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
FCK+K++ +A ++ EM +KG+ PD Y I LL +L E +L ++
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/496 (22%), Positives = 216/496 (43%), Gaps = 51/496 (10%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEKNHNLSIPY 109
L+++N ++ G T L E PD TYNTLI+ C+ H
Sbjct: 243 LITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQ----- 296
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
+++ +M S ++ TY ++ ++ +R +EA+ +L M G SP +Y+ +
Sbjct: 297 -EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
IS + ++ + +A+E+K +M +KG PDV Y L+ ++ A +F+EM G
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P T++ ++ Y +G+F+++ + DE+ V SP +VT+N L+
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEI--------NVCGLSPDIVTWNTLLAVFGQN 467
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
E + + M P+ +++ +IS + R +A + M LD
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM--------LDA- 518
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLL----NG--- 402
+ DLS ++T + + +++E L + P+ ++YC LL NG
Sbjct: 519 ---GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 403 --LHKKATSRFAKRL--------LLFYIVAHCLTIP-SYIIYDILIEKCANNEFKSVVEL 451
+H A ++ + L + + C +P + + L E+ + + ++ +
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 452 VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
V + R +V +A D M R + P A YN L++ H + K+ ++ +E+L G
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 512 VCHMFSVLALIKALYC 527
+ S +I A YC
Sbjct: 696 KPDIISYNTVIYA-YC 710
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 48/290 (16%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEK---NHNLSI 107
L ++N V+ L G ++E VL EM D P+ +TY +L+ A ++ H+L+
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 108 P-YVRIVE------------------------LYHQMCVRELSPNETTYRCMIRLFCDRN 142
Y ++E + ++ R SP+ TT M+ ++ R
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
V +A G+L M E+G +P +Y+ ++ ++ + GK+ E+ E+L KGI PD+ +Y
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYN 703
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
+I C R+ +A +F EM G+ P TY+T + +Y F + + +I+
Sbjct: 704 TVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH 763
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA---LEILRGMPEMLLDP 309
G P+ TYN+++ G C R DEA +E LR LDP
Sbjct: 764 G--------CRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRN-----LDP 800
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/392 (20%), Positives = 152/392 (38%), Gaps = 88/392 (22%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+ +FNA IK G+ E + E+ PD VT+NTL++ + + +S
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS---- 474
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++ +M P T+ +I + E+A+ + R M + G++P +Y+ ++
Sbjct: 475 ---GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPD-------VHAY------GLL------------- 204
+ + ++ ++ EM D P+ +HAY GL+
Sbjct: 532 AALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIE 591
Query: 205 --------IQLLCHQRRLL-EARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 255
+ L+C + LL EA F E+ RG SP T +++V Y + +K +
Sbjct: 592 PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGV 651
Query: 256 QDEVIQKGFLPYYVT---------------------------SFSPSLVTYNALIHGLCF 288
D + ++GF P T P +++YN +I+ C
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCR 711
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 348
R +A I M + PD ++Y+ I + +A + M K C P
Sbjct: 712 NTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGCRP--- 767
Query: 349 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 380
N +T++S+V+ YC ++ + A
Sbjct: 768 -----------NQNTYNSIVDGYCKLNRKDEA 788
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
++S+N VI C R+R+A + EM + PD +TYNT I + A+ +I V
Sbjct: 699 IISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA-ADSMFEEAIGVV 757
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAE--KGLSPHADSYS- 167
R M PN+ TY ++ +C NR +EA +L E + L PHA
Sbjct: 758 RY------MIKHGCRPNQNTYNSIVDGYCKLNRKDEA----KLFVEDLRNLDPHAPKGED 807
Query: 168 -RIISRFCK 175
R++ R K
Sbjct: 808 LRLLERIVK 816
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 126/263 (47%), Gaps = 15/263 (5%)
Query: 79 QEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLF 138
Q D V ++ C+ + NH + L+ +M + + PN TY CMI F
Sbjct: 3 QSHIKADVVISTAIVDRLCK-DGNH------INAQNLFTEMHEKGIFPNVLTYNCMIDSF 55
Query: 139 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 198
C R +A +LR M EK ++P ++S +I+ F K +++ +A E+ EML IFP
Sbjct: 56 CHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTT 115
Query: 199 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 258
Y +I C Q R+ +A+ + M +G SP T+ TL+ YC + E
Sbjct: 116 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 175
Query: 259 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 318
+ ++G + + VTY LIHG C D A ++L M + PD +++ ++
Sbjct: 176 MHRRGIV--------ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 227
Query: 319 SGFRRIRELRKAFELKLEMDQKE 341
+G +ELRKAF + ++ + E
Sbjct: 228 AGLCSKKELRKAFAILEDLQKSE 250
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 23/220 (10%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
++++N +I C GR +A+ +L+ M +PD VT++ LI+A + K
Sbjct: 45 VLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERK-------VS 97
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E+Y +M + P TY MI FC ++RV++A +L MA KG SP ++S +I
Sbjct: 98 EAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLI 157
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ +CK K + +E+ EM +GI + Y LI C L A+DL EM+ G++
Sbjct: 158 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 217
Query: 231 PGGRTYDTLVEAYCLKGEFSKVF------------HLQDE 258
P T+ ++ C K E K F HL+DE
Sbjct: 218 PDYITFHCMLAGLCSKKELRKAFAILEDLQKSEDHHLEDE 257
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 123/267 (46%), Gaps = 29/267 (10%)
Query: 194 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 253
I DV ++ LC + A++LF EM +G+ P TY+ +++++C G +S
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 254 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 313
L +I+K +P +VT++ALI+ ++ EA EI + M + P ++
Sbjct: 66 QLLRHMIEK--------QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTIT 117
Query: 314 YSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCA 373
Y+++I GF + + A + M K C P +V TFS+L+N YC
Sbjct: 118 YNSMIDGFCKQDRVDDAKRMLDSMASK-GCSP-------DVV-------TFSTLINGYCK 162
Query: 374 EDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSY 430
+ + +++ ++ + ++V+Y L++G + A+ LL I C P Y
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI--SCGVAPDY 220
Query: 431 IIYDILIEK-CANNEFKSVVELVKGFR 456
I + ++ C+ E + +++ +
Sbjct: 221 ITFHCMLAGLCSKKELRKAFAILEDLQ 247
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 198/478 (41%), Gaps = 43/478 (8%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++N + K G I A V+++M D PD +TY L+ C+ N+ + V
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG---NIDMGLV- 348
Query: 112 IVELYHQMCVRELSPNETT-YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
L M R N M+ C R++EA+ + M GLSP +YS +I
Sbjct: 349 ---LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
CK + AL + EM DK I P+ +G L+ LC + LLEAR L ++ G +
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 465
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
Y+ +++ Y G + L VI+ G +PS+ T+N+LI+G C Q
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETG--------ITPSVATFNSLIYGYCKTQ 517
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
EA +IL + L P VSY+ ++ + + EL+ EM K P T
Sbjct: 518 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM--KAEGIPPTNVT 575
Query: 351 NESLVKDLS---NHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 407
+ K L H+ + ++ + E K + L+ PD ++Y ++ L +
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFE-KCKQGLRDMESEGIPPDQITYNTIIQYLCR-- 632
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARA 467
+ + I+ S Y+ILI+ + G + +A
Sbjct: 633 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC---------------VYGYIRKADSF 677
Query: 468 RDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
++ +N Y LI HC+ G+ A ++ ++LH GF + A+I L
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 176/396 (44%), Gaps = 57/396 (14%)
Query: 27 ATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMT---- 82
+ GLV ++L GF ++ + ++ LC GRI EA ++ +M
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNS------IIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 83 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
PD V Y+ +I C+ K + + LY +MC + + PN T+ ++ C +
Sbjct: 395 SPDLVAYSIVIHGLCKLGK-------FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
+ EA +L + G + Y+ +I + K+ + +ALE+ +++ GI P V +
Sbjct: 448 MLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
LI C + + EAR + + L G++P +Y TL++AY G + L+ E+ +
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR---------GMPEM---LLDPD 310
G +P P+ VTY+ + GLC + + +LR G+ +M + PD
Sbjct: 568 G-IP-------PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 311 EVSYSAVISGFRRIRELRKAFEL-----KLEMDQKETCWPLDQDT---------NESLVK 356
+++Y+ +I R++ L AF +D + + D+ +S +
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Query: 357 DLSNHDT------FSSLVNDYCAEDKAEMALKLRYQ 386
L + +++L+ +C + EMA+KL +Q
Sbjct: 680 SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQ 715
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 177/402 (44%), Gaps = 44/402 (10%)
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 186
NE TY ++ C + ++E+AV LR K + P S++ I+S +CK + A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
+L G+ P V+++ +LI LC + EA +L +M G+ P TY+ L + + L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G S + + +++ KG SP ++TY L+ G C D L +L+ M
Sbjct: 306 GMISGAWEVIRDMLDKG--------LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 307 LDPDE-VSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
+ + + S ++SG + + +A L +Q + L DL +S
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSL------------FNQMKADGLSPDLV---AYS 402
Query: 366 SLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
+++ C K +MAL L + + LP+S ++ LL GL +K R LL +++
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM-LLEARSLLDSLIS 461
Query: 423 HCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 482
T+ ++Y+I+I+ G+ G + EA ++ P A
Sbjct: 462 SGETL-DIVLYNIVID---------------GYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 483 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
+N LI+ +C N+ +A + + YG + S L+ A
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 47/242 (19%)
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
D++L IL+ M + L+ SY++V+ F RE K +++ E+ K
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK------------ 185
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATS 409
N T+S++V+ C + K E A+ +++ P VS+ +++G K
Sbjct: 186 -------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIE------------KCANNEFKSVVE------- 450
AK F V C +PS ++ILI + A++ K VE
Sbjct: 239 DMAKS--FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 451 -LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHY 509
L KGF + G+++ A ML + P+ Y +L+ C GN+ + K+ML
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 510 GF 511
GF
Sbjct: 357 GF 358
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 9/199 (4%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLS-IPY 109
+VS+ ++ G + + + +EM P VTY+ + C K+ N + +
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Query: 110 VRIVELYHQ----MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
RI E Q M + P++ TY +I+ C + A L +M + L + +
Sbjct: 598 ERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSAT 657
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y+ +I C + KA + ++ + AY LI+ C + A LF ++L
Sbjct: 658 YNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Query: 226 LRGMSPGGRTYDTLVEAYC 244
RG + R Y ++ C
Sbjct: 718 HRGFNVSIRDYSAVINRLC 736
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 120/478 (25%), Positives = 198/478 (41%), Gaps = 43/478 (8%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++N + K G I A V+++M D PD +TY L+ C+ N+ + V
Sbjct: 293 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLG---NIDMGLV- 348
Query: 112 IVELYHQMCVRELSPNETT-YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
L M R N M+ C R++EA+ + M GLSP +YS +I
Sbjct: 349 ---LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVI 405
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
CK + AL + EM DK I P+ +G L+ LC + LLEAR L ++ G +
Sbjct: 406 HGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGET 465
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
Y+ +++ Y G + L VI+ G +PS+ T+N+LI+G C Q
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETG--------ITPSVATFNSLIYGYCKTQ 517
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
EA +IL + L P VSY+ ++ + + EL+ EM K P T
Sbjct: 518 NIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREM--KAEGIPPTNVT 575
Query: 351 NESLVKDLS---NHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 407
+ K L H+ + ++ + E K + L+ PD ++Y ++ L +
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFE-KCKQGLRDMESEGIPPDQITYNTIIQYLCR-- 632
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARA 467
+ + I+ S Y+ILI+ + G + +A
Sbjct: 633 VKHLSGAFVFLEIMKSRNLDASSATYNILIDSLC---------------VYGYIRKADSF 677
Query: 468 RDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
++ +N Y LI HC+ G+ A ++ ++LH GF + A+I L
Sbjct: 678 IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRL 735
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 176/396 (44%), Gaps = 57/396 (14%)
Query: 27 ATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMT---- 82
+ GLV ++L GF ++ + ++ LC GRI EA ++ +M
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNS------IIPCSVMLSGLCKTGRIDEALSLFNQMKADGL 394
Query: 83 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
PD V Y+ +I C+ K + + LY +MC + + PN T+ ++ C +
Sbjct: 395 SPDLVAYSIVIHGLCKLGK-------FDMALWLYDEMCDKRILPNSRTHGALLLGLCQKG 447
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
+ EA +L + G + Y+ +I + K+ + +ALE+ +++ GI P V +
Sbjct: 448 MLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
LI C + + EAR + + L G++P +Y TL++AY G + L+ E+ +
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR---------GMPEML---LDPD 310
G +P P+ VTY+ + GLC + + +LR G+ +M + PD
Sbjct: 568 G-IP-------PTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPD 619
Query: 311 EVSYSAVISGFRRIRELRKAFEL-----KLEMDQKETCWPLDQDT---------NESLVK 356
+++Y+ +I R++ L AF +D + + D+ +S +
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Query: 357 DLSNHDT------FSSLVNDYCAEDKAEMALKLRYQ 386
L + +++L+ +C + EMA+KL +Q
Sbjct: 680 SLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQ 715
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 177/402 (44%), Gaps = 44/402 (10%)
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 186
NE TY ++ C + ++E+AV LR K + P S++ I+S +CK + A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
+L G+ P V+++ +LI LC + EA +L +M G+ P TY+ L + + L
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLL 305
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G S + + +++ KG SP ++TY L+ G C D L +L+ M
Sbjct: 306 GMISGAWEVIRDMLDKG--------LSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 307 LDPDE-VSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
+ + + S ++SG + + +A L +Q + L DL +S
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSL------------FNQMKADGLSPDLV---AYS 402
Query: 366 SLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
+++ C K +MAL L + + LP+S ++ LL GL +K R LL +++
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM-LLEARSLLDSLIS 461
Query: 423 HCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 482
T+ ++Y+I+I+ G+ G + EA ++ P A
Sbjct: 462 SGETL-DIVLYNIVID---------------GYAKSGCIEEALELFKVVIETGITPSVAT 505
Query: 483 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
+N LI+ +C N+ +A + + YG + S L+ A
Sbjct: 506 FNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 103/242 (42%), Gaps = 47/242 (19%)
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
D++L IL+ M + L+ SY++V+ F RE K +++ E+ K
Sbjct: 141 DDSLYILKKMKDQNLNVSTQSYNSVLYHF---RETDKMWDVYKEIKDK------------ 185
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATS 409
N T+S++V+ C + K E A+ +++ P VS+ +++G K
Sbjct: 186 -------NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIE------------KCANNEFKSVVE------- 450
AK F V C +PS ++ILI + A++ K VE
Sbjct: 239 DMAKS--FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYN 296
Query: 451 -LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHY 509
L KGF + G+++ A ML + P+ Y +L+ C GN+ + K+ML
Sbjct: 297 ILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSR 356
Query: 510 GF 511
GF
Sbjct: 357 GF 358
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 9/199 (4%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLS-IPY 109
+VS+ ++ G + + + +EM P VTY+ + C K+ N + +
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Query: 110 VRIVELYHQ----MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
RI E Q M + P++ TY +I+ C + A L +M + L + +
Sbjct: 598 ERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSAT 657
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y+ +I C + KA + ++ + AY LI+ C + A LF ++L
Sbjct: 658 YNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Query: 226 LRGMSPGGRTYDTLVEAYC 244
RG + R Y ++ C
Sbjct: 718 HRGFNVSIRDYSAVINRLC 736
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 223/538 (41%), Gaps = 73/538 (13%)
Query: 26 KATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD-- 83
K+ EK L+S ++ GF + C N V+K L + +A V + M +
Sbjct: 181 KSMAEKFLLSFEKMIRKGFLP---SVRNC----NIVLKVLRDSRMMNKASAVYETMIEHG 233
Query: 84 --PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR 141
P +T+NT++ + +A R+ +++ +M R + +E TY +I F
Sbjct: 234 IMPTVITFNTMLDSCFKAGDLE-------RVDKIWLEMKRRNIEFSEVTYNILINGFSKN 286
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
++EEA M G + S++ +I +CK A + EML+ GI+P Y
Sbjct: 287 GKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTY 346
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+ I LC R+ +AR+L M +P +Y+TL+ Y G+F + L D++
Sbjct: 347 NIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDL-- 400
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
PS+VTYN LI GLC + A + M L+ PD ++Y+ ++ GF
Sbjct: 401 ------RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 322 RRIRELRKAFELKLEMDQK-----------ETCWPL---DQDTNESLVKDLSNHD----- 362
+ L A E+ EM +K L D D L +++ D
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPD 514
Query: 363 --TFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLL 417
++ ++ C A++ + ++ +PD V+Y ++ G + + A+ L
Sbjct: 515 LTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNL-- 572
Query: 418 FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 477
YD ++ K + L+ G G + +A + M R R
Sbjct: 573 ---------------YDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVR 617
Query: 478 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD-ERYNEM 534
P +N L++ C GN+ +AY +M G + +S LI CD E++ E+
Sbjct: 618 PNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISK-NCDFEKWEEV 674
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 152/365 (41%), Gaps = 72/365 (19%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELY 116
++N I LC GRI +A +L M PD V+YNTL+ + K +V L+
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGK-------FVEASLLF 397
Query: 117 HQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 176
+ ++ P+ TY +I C+ +E A + M + + P +Y+ ++ F KN
Sbjct: 398 DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Query: 177 KEMGKALEMKVEMLDKGIFPDVHAY----------------------------------- 201
+ A E+ EML KGI PD +AY
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 202 -GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
+ I LC L++A + +++ G+ P TY T++ Y G+F +L DE++
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 261 QKGFLPYYVTSF---------------------------SPSLVTYNALIHGLCFFQRPD 293
+K P +T F P+++T+NAL++G+C D
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
EA L M E + P++ SY+ +IS + + +L EM KE D T+ +
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI--EPDGYTHRA 695
Query: 354 LVKDL 358
L K L
Sbjct: 696 LFKHL 700
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 135/316 (42%), Gaps = 55/316 (17%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++N +I LC G + A+ + +EMT PD +TY TL+ KN NLS+
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV---KNGNLSMA-- 463
Query: 111 RIVELYHQM---------------CVREL---------------------SPNETTYRCM 134
E+Y +M V EL +P+ T Y
Sbjct: 464 --TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 135 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 194
I C + +A+ R + GL P +Y+ +I + +N + A + EML K +
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 195 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 254
+P V Y +LI RL +A EM RG+ P T++ L+ C G + +
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 255 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 314
++ ++G +P P+ +Y LI C F++ +E +++ + M + ++PD ++
Sbjct: 642 YLCKMEEEG-IP-------PNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Query: 315 SAVISGFRRIRELRKA 330
A+ + E R+
Sbjct: 694 RALFKHLEKDHESREV 709
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 166/387 (42%), Gaps = 43/387 (11%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
+SPN ++ +I+ C V+ A+ + R M E+ P +Y ++ CK + + +A+
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
+ EM +G P Y +LI LC + L L M L+G P TY+TL+
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
CLKG+ K L + ++ + P+ VTY LI+GL +R +A+ +L M
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCI--------PNDVTYGTLINGLVKQRRATDAVRLLSSME 354
Query: 304 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 363
E ++ YS +ISG + + +A L +M +K C P N
Sbjct: 355 ERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEK-GCKP--------------NIVV 399
Query: 364 FSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYI 420
+S LV+ C E K A+ L + LP++ +Y L+ G K A +
Sbjct: 400 YSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ------ 453
Query: 421 VAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG 480
+ ++ C+ N+F V L+ G G V EA ML +P+
Sbjct: 454 ----------VWKEMDKTGCSRNKFCYSV-LIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 481 AVYNLLIFDHCIGGNVHKAYDMYKEML 507
Y+ +I C G++ A +Y EML
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 210/468 (44%), Gaps = 51/468 (10%)
Query: 53 KCL---VSFNAVIKRLCGEGRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNHNL 105
KCL ++ ++ LC E RI EA +L EM C V YN LI C K +L
Sbjct: 217 KCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLC---KKGDL 273
Query: 106 SIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
+ R+ +L M ++ PNE TY +I C + ++++AV +L M P+ +
Sbjct: 274 T----RVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y +I+ K + A+ + M ++G + H Y +LI L + + EA L+++M
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
+G P Y LV+ C +G+ ++ + + +I G L P+ TY++L+ G
Sbjct: 390 EKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL--------PNAYTYSSLMKG 441
Query: 286 LCFFQRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
FF+ +EA+++ + M + ++ YS +I G + +++A + +M
Sbjct: 442 --FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKM----LT 495
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY------QAQYLPDSVSYC 397
+ DT +SS++ C + ALKL + + + PD V+Y
Sbjct: 496 IGIKPDTV-----------AYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 398 LLLNGLHKKATSRFAKRLLLFYIVAHC--LTIPSYIIYDILIEKCAN-NEFKSVV-ELVK 453
+LL+GL + A LL + C I + L EK + ++ +S + ELV
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVV 604
Query: 454 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 501
R V+ A + ML + P+ + + +++ + C ++ A D
Sbjct: 605 RLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 39/314 (12%)
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
+++++++ +G + + D V+ + SP+ +++N +I LC + D
Sbjct: 149 KSFNSVLNVIINEGLYHRGLEFYDYVVNSNM----NMNISPNGLSFNLVIKALCKLRFVD 204
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
A+E+ RGMPE PD +Y ++ G + + +A L EM Q E C P
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM-QSEGCSP-------- 255
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSR 410
+ ++ L++ C + KL + +P+ V+Y L++GL K
Sbjct: 256 ------SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDT 470
A LL + + C IP+ + Y LI LVK R +A R +
Sbjct: 310 KAVSLLERMVSSKC--IPNDVTYGTLING-----------LVKQRR----ATDAVRLLSS 352
Query: 471 MLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDER 530
M R Y +Y++LI G +A ++++M G ++ L+ L + +
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 531 YNEMSWVIRNTLRS 544
NE ++ + S
Sbjct: 413 PNEAKEILNRMIAS 426
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 148/392 (37%), Gaps = 121/392 (30%)
Query: 232 GGRTYDTLVEAYCLKGEFSKV----------------------------FHLQDE----- 258
G T +++E+Y G+F V HL D+
Sbjct: 76 GDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLF 135
Query: 259 ----------------------VIQKG-------FLPYYVTS-----FSPSLVTYNALIH 284
+I +G F Y V S SP+ +++N +I
Sbjct: 136 HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195
Query: 285 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 344
LC + D A+E+ RGMPE PD +Y ++ G + + +A L EM Q E C
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM-QSEGCS 254
Query: 345 PLDQDTN---ESLVK--DLS----------------NHDTFSSLVNDYCAE---DKAEMA 380
P N + L K DL+ N T+++L++ C + DKA
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 381 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLL------FYIVAHCLTIPSYIIYD 434
L+ ++ +P+ V+Y L+NGL K+ + A RLL +++ H IY
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH--------IYS 366
Query: 435 ILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGG 494
+LI G G EA M + +P VY++L+ C G
Sbjct: 367 VLIS---------------GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Query: 495 NVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
++A ++ M+ G + + ++ +L+K +
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 36/320 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V +N +I C G + +A + M D VTYN+L++ C + + +
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR-------WS 226
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
L M +R++ PN T+ +I +F + EA+ + M + + P +Y+ +I
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ C + + +A +M M+ KG PDV Y LI C +R+ E LF+EM RG+
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 346
Query: 231 PGGRTYDTLVEAYCLKGE---FSKVFHLQDE------------------VIQKGFLPY-- 267
TY+T+++ Y G ++F D ++K + +
Sbjct: 347 GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFEN 406
Query: 268 -YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 326
+ + TYN +IHG+C ++A ++ R + L PD VSY+ +ISGF R R+
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Query: 327 LRKAFELKLEMDQKETCWPL 346
K+ L +M Q++ PL
Sbjct: 467 WDKSDLLYRKM-QEDGLLPL 485
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 112/486 (23%), Positives = 201/486 (41%), Gaps = 102/486 (20%)
Query: 77 VLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIR 136
++Q P V ++ ++S ++ KN++L ++ L+H M V + + +Y +I
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKS-KNYDL------VISLFHHMEVCGIGHDLYSYNIVIN 112
Query: 137 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 196
C +R A+ ++ M + G P + S +I+ FC+ + A+++ +M + G P
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRP 172
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
DV Y +I C + +A +LF M G+ TY++LV C G +S L
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 257 DEVIQKGFLPYYVT------------SFS---------------PSLVTYNALIHGLCFF 289
+++ + +P +T FS P + TYN+LI+GLC
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
R DEA ++L M PD V+Y+ +I+GF + + + + +L EM Q+
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR--------- 343
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATS 409
LV D T+++++ Y + + A ++ + P+ +Y +LL GL
Sbjct: 344 ---GLVGDTI---TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC--MNW 395
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 469
R K L+LF N KS +EL
Sbjct: 396 RVEKALVLF-----------------------ENMQKSEIEL------------------ 414
Query: 470 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDE 529
+ YN++I C GNV A+D+++ + G + S +I +C +
Sbjct: 415 ---------DITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG-FCRK 464
Query: 530 RYNEMS 535
R + S
Sbjct: 465 RQWDKS 470
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 111/224 (49%), Gaps = 18/224 (8%)
Query: 51 TEKCL----VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKN 102
T +C+ ++N++I LC GR+ EA+ +L M PD VTYNTLI+ C++++
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
+ +L+ +M R L + TY +I+ + R + A I M + P+
Sbjct: 331 DEGT-------KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PN 380
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
+YS ++ C N + KAL + M I D+ Y ++I +C + +A DLF+
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
+ +G+ P +Y T++ +C K ++ K L ++ + G LP
Sbjct: 441 SLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 125/536 (23%), Positives = 223/536 (41%), Gaps = 63/536 (11%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
SFN+V+ +C G+++ AE ++ M +PD ++YN+LI C + S+ +
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ +C P+ ++ + F ++E + +M K SP+ +YS I
Sbjct: 118 RASHGFIC----KPDIVSFNSLFNGFSKMKMLDEVFVYMGVML-KCCSPNVVTYSTWIDT 172
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
FCK+ E+ AL+ M + P+V + LI C L A L++EM MS
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR- 291
TY L++ +C KGE + + +++ P+ + Y +I G FFQR
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVED--------RVEPNSLVYTTIIDG--FFQRG 282
Query: 292 -PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
D A++ L M + D +Y +ISG +L++A E+ +M++ +
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD--------- 333
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY---QAQYLPDSVSYCLLLNGLHKKA 407
LV D+ F++++N Y + + A+ + + + + PD V+ +++G+ K
Sbjct: 334 ---LVPDMV---IFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387
Query: 408 TSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAAR 466
A IV C+ + ++Y +LI+ C +F V L GLV
Sbjct: 388 QLHEA-------IVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV----- 435
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALY 526
P+ +Y I C GN+ A+ + M+ G + + + LI L
Sbjct: 436 -----------PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA 484
Query: 527 CDERYNEMSWVIRNTLRSCNLNDSEQLKILDEIDPERCIIYALLDVLAEKAMDGLL 582
E V L S DS +L + + A D+L + GL+
Sbjct: 485 SKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 172/430 (40%), Gaps = 63/430 (14%)
Query: 32 GLVSPP-----NVLIPGFAAGKATTE---------KC----LVSFNAVIKRLCGEGRIRE 73
G + P N L GF+ K E KC +V+++ I C G ++
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQL 181
Query: 74 AETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNET 129
A M P+ VT+ LI C+A +L + V LY +M +S N
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKA---GDLEVA----VSLYKEMRRVRMSLNVV 234
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
TY +I FC + ++ A + M E + P++ Y+ II F + + A++ +M
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKM 294
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 249
L++G+ D+ AYG++I LC +L EA ++ ++M + P + T++ AY G
Sbjct: 295 LNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRM 354
Query: 250 SKVFHLQDEVIQKGFLP----------------------YYVTSFSPSLVTYNALIHGLC 287
++ ++I++GF P Y + V Y LI LC
Sbjct: 355 KAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALC 414
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
E + + E L PD+ Y++ I+G + L AF+LK M Q
Sbjct: 415 KEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ-------- 466
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 407
E L+ DL + T + +A + PDS + LL+ K+
Sbjct: 467 ----EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Query: 408 TSRFAKRLLL 417
A LLL
Sbjct: 523 NMAAASDLLL 532
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 41/245 (16%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+ ++ +I LCG G+++EA ++++M PD V + T+++A ++ +
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK------- 355
Query: 111 RIVELYHQMCVRELSP------------------------------NETTYRCMIRLFCD 140
V +YH++ R P N+ Y +I C
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCK 415
Query: 141 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 200
E + ++E GL P Y+ I+ CK + A ++K M+ +G+ D+ A
Sbjct: 416 EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLA 475
Query: 201 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
Y LI L + ++EAR +F EML G+SP +D L+ AY +G + L ++
Sbjct: 476 YTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQ 535
Query: 261 QKGFL 265
++G +
Sbjct: 536 RRGLV 540
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 171/411 (41%), Gaps = 60/411 (14%)
Query: 149 GILRL-----MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
GIL L + +G +PH S++ ++S CK ++ A ++ M G PDV +Y
Sbjct: 37 GILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNS 96
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
LI C + A + + LR S G +V L FSK+ L + + G
Sbjct: 97 LIDGHCRNGDIRSASLVLES--LRA-SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMG 153
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+ + SP++VTY+ I C AL+ M L P+ V+++ +I G+ +
Sbjct: 154 VM---LKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK 210
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMA 380
+L A L EM + V+ N T+++L++ +C + +AE
Sbjct: 211 AGDLEVAVSLYKEMRR---------------VRMSLNVVTYTALIDGFCKKGEMQRAEEM 255
Query: 381 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHC-LTIPSYIIYDILIEK 439
+ + P+S+ Y +++G ++ S A + L + L I +Y + I+
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV--IISGL 313
Query: 440 CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 499
C N + K E+V+ LV P+ ++ ++ + G + A
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLV----------------PDMVIFTTMMNAYFKSGRMKAA 357
Query: 500 YDMYKEMLHYGFVCHMFSVLALIKAL------------YCDERYNEMSWVI 538
+MY +++ GF + ++ +I + +C E+ N++ + +
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTV 408
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/325 (20%), Positives = 129/325 (39%), Gaps = 49/325 (15%)
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 286
RG +P +++++V C G+ ++++ +P + P +++YN+LI G
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQV----KFAEDIVHS--MPRF--GCEPDVISYNSLIDGH 101
Query: 287 CF---FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
C + LE LR + PD VS++++ +GF +++ L + F M + C
Sbjct: 102 CRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVM--LKCC 159
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLL 400
P N T+S+ ++ +C + ++ALK + + P+ V++ L+
Sbjct: 160 SP--------------NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLI 205
Query: 401 NGLHKKATSRFAKRLLL-FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRG 459
+G K A L V L + +Y L+ GF +G
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTY------------------TALIDGFCKKG 247
Query: 460 LVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVL 519
+ A M+ P VY +I G+ A +ML+ G + +
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307
Query: 520 ALIKALYCDERYNEMSWVIRNTLRS 544
+I L + + E + ++ + +S
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKS 332
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 210/500 (42%), Gaps = 67/500 (13%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV-RIV 113
N++I C G++ EAE + M D PD TYNTL+ C A YV +
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRA--------GYVDEAL 421
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+L QMC +E+ P TY +++ + + + + ++M ++G++ S S ++
Sbjct: 422 KLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
K + +A+++ +L +G+ D ++I LC ++ EA+++ + + P
Sbjct: 482 FKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
+TY L Y G + F +++ + +KG P ++ YN LI G ++ +
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP--------TIEMYNTLISGAFKYRHLN 593
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK------------- 340
+ +++ + L P +Y A+I+G+ I + KA+ EM +K
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653
Query: 341 ETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCA-----EDKAEMALKLRYQAQ------- 388
+ + LD+ L+ L F L+ Y + E A LK + A+
Sbjct: 654 NSLFRLDKIDEACLL--LQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTP 711
Query: 389 ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEF 445
+P+++ Y + + GL K A++L + + IP Y ILI CA
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF-IPDEYTYTILIHGCA---- 766
Query: 446 KSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 505
+ G +N+A RD M + P YN LI C GNV +A + +
Sbjct: 767 -----------IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHK 815
Query: 506 MLHYGFVCHMFSVLALIKAL 525
+ G + + LI L
Sbjct: 816 LPQKGITPNAITYNTLIDGL 835
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/471 (22%), Positives = 189/471 (40%), Gaps = 71/471 (15%)
Query: 61 VIKRLCGEGRIREAETVLQEMTDP-----DCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
V+ C G + +A +E + VTYN+LI+ ++ R++ L
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMT----RVLRL 286
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
M R +S N TY +I+ +C + +EEA + L+ EK L Y ++ +C+
Sbjct: 287 ---MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCR 343
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
++ A+ + M++ G+ + LI C +L+EA +F M + P T
Sbjct: 344 TGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHT 403
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 295
Y+TLV+ YC G + L D++ QK + P+++TYN L+ G +
Sbjct: 404 YNTLVDGYCRAGYVDEALKLCDQMCQKEVV--------PTVMTYNILLKGYSRIGAFHDV 455
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
L + + M + ++ DE+S S ++ ++ + +A +L W N
Sbjct: 456 LSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKL----------WE-----NVLAR 500
Query: 356 KDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKK------ 406
L++ T + +++ C +K A ++ P +Y L +G +K
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 407 -ATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCAN-NEFKSVVELVKGFRMRGLVNEA 464
A + +R +F P+ +Y+ LI V +LV R RGL
Sbjct: 561 FAVKEYMERKGIF---------PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT--- 608
Query: 465 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHM 515
P A Y LI C G + KAY EM+ G ++
Sbjct: 609 -------------PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNV 646
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 148/333 (44%), Gaps = 58/333 (17%)
Query: 69 GRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVREL 124
G ++EA V + M P YNTLIS A K +L+ ++ +L ++ R L
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAF---KYRHLN----KVADLVIELRARGL 607
Query: 125 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 184
+P TY +I +C+ +++A M EKG++ + + S+I + + ++ +A
Sbjct: 608 TPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACL 667
Query: 185 MKVEMLD--------------------------------------KGIFPDVHAYGLLIQ 206
+ +++D K + P+ Y + I
Sbjct: 668 LLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIA 727
Query: 207 LLCHQRRLLEARDLFQEMLLRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
LC +L +AR LF ++L P TY L+ + G+ +K F L+DE+ KG +
Sbjct: 728 GLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII 787
Query: 266 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 325
P ++VTYNALI GLC D A +L +P+ + P+ ++Y+ +I G +
Sbjct: 788 P--------NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Query: 326 ELRKAFELKLEMDQKETCWPLDQDTNESLVKDL 358
+ +A LK +M +K D+ + + K++
Sbjct: 840 NVAEAMRLKEKMIEKGLVRGSDKQGDVDIPKEV 872
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 16/155 (10%)
Query: 49 ATTEKCLVS----FNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEA 99
+T +K LV +N I LC G++ +A + ++ PD TY LI C
Sbjct: 709 STPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG-CAI 767
Query: 100 EKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL 159
+ N + L +M ++ + PN TY +I+ C V+ A +L + +KG+
Sbjct: 768 AGDIN------KAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGI 821
Query: 160 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 194
+P+A +Y+ +I K+ + +A+ +K +M++KG+
Sbjct: 822 TPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 163/410 (39%), Gaps = 44/410 (10%)
Query: 150 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 209
++R+ E SP + I+ + + + AL + M + G P + + L+ L
Sbjct: 144 LVRVFKEFSFSPTV--FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLV 201
Query: 210 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 269
+ A ++ +M+ +SP T +V AYC G K E
Sbjct: 202 RKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESS------- 254
Query: 270 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 329
++VTYN+LI+G + +LR M E + + V+Y+++I G+ +
Sbjct: 255 LGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCK------ 308
Query: 330 AFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQY 389
K M++ E + L ++ K +++ + L++ YC + A+++
Sbjct: 309 ----KGLMEEAEHVFELLKEK-----KLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 390 LPDSVSYCL---LLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFK 446
+ + + L+NG K A++ +F + P + Y+ L++
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQ--IFSRMNDWSLKPDHHTYNTLVD-------- 409
Query: 447 SVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
G+ G V+EA + D M + P YN+L+ + G H ++K M
Sbjct: 410 -------GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 507 LHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLKIL 556
L G S L++AL+ +NE + N L L D+ L ++
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVM 512
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/450 (24%), Positives = 193/450 (42%), Gaps = 51/450 (11%)
Query: 83 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
+P +YNTL++A EA++ +V++ L+ ++PN TY +I++ C +
Sbjct: 111 EPAIRSYNTLLNAFVEAKQ-------WVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
E+A G L M ++G P SYS +I+ K ++ ALE+ EM ++G+ PDV Y
Sbjct: 164 EFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYN 223
Query: 203 LLIQLLCHQRRLLEARDLFQEMLL-RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+LI ++ A +L+ +L + P +T++ ++ G + + + Q
Sbjct: 224 ILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQ 283
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
L TY++LIHGLC D+A + + E D V+Y+ ++ GF
Sbjct: 284 --------NEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 322 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 381
R +++++ EL M+ K + ++ + L+K L + D+A M
Sbjct: 336 CRCGKIKESLELWRIMEHKNS---VNIVSYNILIKGLLENGKI----------DEATMIW 382
Query: 382 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHC---LTIPSYI-IYDILI 437
+L Y D +Y + ++GL K L + V L + +Y I D L
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLC--VNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440
Query: 438 EKCANNEFKSVVE----------------LVKGFRMRGLVNEAARARDTMLHRNYRPEGA 481
+K E ++V+ L+ G + EA+ M RP
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVV 500
Query: 482 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
YN+LI C G +A KEML G+
Sbjct: 501 SYNILICGLCKAGKFGEASAFVKEMLENGW 530
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 176/394 (44%), Gaps = 40/394 (10%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSI 107
EK L +++++I LC G + +AE+V E+ + D VTYNT++ C K S+
Sbjct: 287 EKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE-SL 345
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
RI+E + S N +Y +I+ + +++EA I RLM KG + +Y
Sbjct: 346 ELWRIME-------HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYG 398
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
I C N + KAL + E+ G DV+AY +I LC ++RL EA +L +EM
Sbjct: 399 IFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKH 458
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G+ + L+ + E+ + G P++V+YN LI GLC
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG--------CRPTVVSYNILICGLC 510
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
+ EA ++ M E PD +YS ++ G R R++ A EL W
Sbjct: 511 KAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL----------W--H 558
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLH 404
Q L D+ H+ L++ C+ K + A+ + ++ + V+Y L+ G
Sbjct: 559 QFLQSGLETDVMMHNI---LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFF 615
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIE 438
K S A ++ Y+ L P I Y+ +++
Sbjct: 616 KVGDSNRAT-VIWGYMYKMGLQ-PDIISYNTIMK 647
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 185/434 (42%), Gaps = 49/434 (11%)
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRI 169
RIVEL +E +E +I+ + + ++A+ + + M E G P SY+ +
Sbjct: 64 RIVELIRS---QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
++ F + K+ K + G+ P++ Y +LI++ C ++ +AR M G
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P +Y T++ G+ L DE+ ++G +P + YN LI G
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERG--------VAPDVTCYNILIDGFLKE 232
Query: 290 QRPDEALEIL-RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 348
+ A+E+ R + + + P+ +++ +ISG + + ++ M Q E
Sbjct: 233 KDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER------ 286
Query: 349 DTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 405
KDL T+SSL++ C DKAE + + D V+Y +L G +
Sbjct: 287 ------EKDLY---TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 406 KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 465
+ + L L+ I+ H ++ + + Y+ILI KG G ++EA
Sbjct: 338 --CGKIKESLELWRIMEHKNSV-NIVSYNILI---------------KGLLENGKIDEAT 379
Query: 466 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
M + Y + Y + I C+ G V+KA + +E+ G +++ ++I L
Sbjct: 380 MIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCL 439
Query: 526 YCDERYNEMSWVIR 539
+R E S +++
Sbjct: 440 CKKKRLEEASNLVK 453
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 127/300 (42%), Gaps = 28/300 (9%)
Query: 40 LIP--GFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLI 93
L+P G+AA K T + I LC G + +A V+QE+ D Y ++I
Sbjct: 384 LMPAKGYAADKTT-------YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 94 SAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRL 153
C+ ++ S L +M + N +I +R+ EA LR
Sbjct: 437 DCLCKKKRLEEAS-------NLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLRE 489
Query: 154 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 213
M + G P SY+ +I CK + G+A EML+ G PD+ Y +L+ LC R+
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Query: 214 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 273
+ A +L+ + L G+ ++ L+ C G+ + + + + +
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR--------NCT 601
Query: 274 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
+LVTYN L+ G + A I M +M L PD +SY+ ++ G R + A E
Sbjct: 602 ANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEF 661
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 185/473 (39%), Gaps = 90/473 (19%)
Query: 129 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 188
Y ++R + V I+ L+ + D +I + KN +AL++
Sbjct: 44 VVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKR 103
Query: 189 MLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
M + G P + +Y L+ ++ ++ LF G++P +TY+ L++ C K
Sbjct: 104 MREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKK 163
Query: 248 EFSKVFHLQDEVIQKGFLPY-YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
EF K +GFL + + F P + +Y+ +I+ L + D+ALE+ M E
Sbjct: 164 EFEKA---------RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD---- 362
+ PD Y+ +I GF + ++ + A EL + + + +P + T+ ++ LS
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP-NVKTHNIMISGLSKCGRVDD 273
Query: 363 ------------------TFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLN 401
T+SSL++ C DKAE + + D V+Y +L
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 402 GLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLV 461
G + + + L L+ I+ H ++ + + Y+ILI KG G +
Sbjct: 334 GFCR--CGKIKESLELWRIMEHKNSV-NIVSYNILI---------------KGLLENGKI 375
Query: 462 NEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY--------------------- 500
+EA M + Y + Y + I C+ G V+KA
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 501 --------------DMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 539
++ KEM +G + ALI L D R E S+ +R
Sbjct: 436 IDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLR 488
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 47 GKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKN 102
GK +VS+N +I LC G+ EA ++EM + PD TY+ L+ C ++
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCR-DRK 549
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
+L++ EL+HQ L + + +I C ++++A+ ++ M + + +
Sbjct: 550 IDLAL------ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
+Y+ ++ F K + +A + M G+ PD+ +Y +++ LC R + A + F
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 223 EMLLRGMSPGGRTYDTLVEA 242
+ G+ P T++ LV A
Sbjct: 664 DARNHGIFPTVYTWNILVRA 683
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 20/269 (7%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN +I+ LCG G+ +A +L M+ +PD VTYNTLI C++ + + S
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKAS------ 261
Query: 113 VELYHQMCVREL-SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
E++ + + SP+ TY MI +C ++ EA +L M G+ P +++ ++
Sbjct: 262 -EMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ K EM A E++ +M+ G FPDV + LI C ++ + L++EM RGM P
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY L+ A C + K L ++ K +P P + YN +I G C +
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKDIIP------QPFM--YNPVIDGFCKAGK 432
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISG 320
+EA I+ M + PD+++++ +I G
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 195/442 (44%), Gaps = 53/442 (11%)
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
TYN L + C+A H+L+ +++ M +SPN ++ F ++ ++ A
Sbjct: 105 TYNLLTRSLCKAGL-HDLA------GQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 148 VGILRLMAE-KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 206
+L E +G +S +++ K + A+++ E L D + +LI+
Sbjct: 158 TALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 207 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
LC + +A +L M G P TY+TL++ +C E +K + +V + G
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSG--- 270
Query: 267 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 326
+ SP +VTY ++I G C + EA +L M + + P V+++ ++ G+ + E
Sbjct: 271 ---SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 327 LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ 386
+ A E++ +M C+P + TF+SL++ YC + +L +
Sbjct: 328 MLTAEEIRGKMIS-FGCFP--------------DVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 387 AQ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANN 443
P++ +Y +L+N L + +R K L +A IP +Y+ +I+
Sbjct: 373 MNARGMFPNAFTYSILINALCNE--NRLLKARELLGQLASKDIIPQPFMYNPVID----- 425
Query: 444 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
GF G VNEA + M + +P+ + +LI HC+ G + +A ++
Sbjct: 426 ----------GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 504 KEMLHYGFVCHMFSVLALIKAL 525
+M+ G +V +L+ L
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCL 497
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+FN ++ G + AE + +M PD VT+ +LI C + +
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ-------VSQ 365
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
L+ +M R + PN TY +I C+ NR+ +A +L +A K + P Y+ +I
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
FCK ++ +A + EM K PD + +LI C + R+ EA +F +M+ G SP
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
T +L+ G + +HL +++ +KG
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++ ++I C G++REA ++L +M P VT+N L+ +A + +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE-------ML 329
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E+ +M P+ T+ +I +C +V + + M +G+ P+A +YS +I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ C + KA E+ ++ K I P Y +I C ++ EA + +EM +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 270
P T+ L+ +C+KG + + +++ G P +T
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 108/286 (37%), Gaps = 40/286 (13%)
Query: 275 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 334
S TYN L LC D A ++ M + P+ ++S F +L A L
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 335 LEMDQKETCWPLDQDTNESLVK------------------DLSNHDTFSSLVNDYCAEDK 376
L+ + E C + +LVK ++ TF+ L+ C K
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 377 AEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIY 433
AE AL+L PD V+Y L+ G K ++ L S +
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCK----------------SNELNKASEMFK 265
Query: 434 DILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG 493
D+ + + + ++ G+ G + EA+ D ML P +N+L+ +
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 494 GNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 539
G + A ++ +M+ +G + + +LI YC R ++S R
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDG-YC--RVGQVSQGFR 368
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 20/269 (7%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN +I+ LCG G+ +A +L M+ +PD VTYNTLI C++ + + S
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKAS------ 261
Query: 113 VELYHQMCVREL-SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
E++ + + SP+ TY MI +C ++ EA +L M G+ P +++ ++
Sbjct: 262 -EMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVD 320
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ K EM A E++ +M+ G FPDV + LI C ++ + L++EM RGM P
Sbjct: 321 GYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFP 380
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY L+ A C + K L ++ K +P P + YN +I G C +
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKDIIP------QPFM--YNPVIDGFCKAGK 432
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISG 320
+EA I+ M + PD+++++ +I G
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIG 461
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 195/442 (44%), Gaps = 53/442 (11%)
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
TYN L + C+A H+L+ +++ M +SPN ++ F ++ ++ A
Sbjct: 105 TYNLLTRSLCKAGL-HDLA------GQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFA 157
Query: 148 VGILRLMAE-KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 206
+L E +G +S +++ K + A+++ E L D + +LI+
Sbjct: 158 TALLLQSFEVEGCCMVVNS---LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 207 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
LC + +A +L M G P TY+TL++ +C E +K + +V + G
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSG--- 270
Query: 267 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 326
+ SP +VTY ++I G C + EA +L M + + P V+++ ++ G+ + E
Sbjct: 271 ---SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 327 LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ 386
+ A E++ +M C+P + TF+SL++ YC + +L +
Sbjct: 328 MLTAEEIRGKMIS-FGCFP--------------DVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 387 AQ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANN 443
P++ +Y +L+N L + +R K L +A IP +Y+ +I+
Sbjct: 373 MNARGMFPNAFTYSILINALCNE--NRLLKARELLGQLASKDIIPQPFMYNPVID----- 425
Query: 444 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
GF G VNEA + M + +P+ + +LI HC+ G + +A ++
Sbjct: 426 ----------GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIF 475
Query: 504 KEMLHYGFVCHMFSVLALIKAL 525
+M+ G +V +L+ L
Sbjct: 476 HKMVAIGCSPDKITVSSLLSCL 497
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 12/212 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+FN ++ G + AE + +M PD VT+ +LI C + +
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQ-------VSQ 365
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
L+ +M R + PN TY +I C+ NR+ +A +L +A K + P Y+ +I
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
FCK ++ +A + EM K PD + +LI C + R+ EA +F +M+ G SP
Sbjct: 426 GFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSP 485
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
T +L+ G + +HL +++ +KG
Sbjct: 486 DKITVSSLLSCLLKAGMAKEAYHL-NQIARKG 516
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 11/220 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++ ++I C G++REA ++L +M P VT+N L+ +A + +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE-------ML 329
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E+ +M P+ T+ +I +C +V + + M +G+ P+A +YS +I
Sbjct: 330 TAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ C + KA E+ ++ K I P Y +I C ++ EA + +EM +
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCK 449
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 270
P T+ L+ +C+KG + + +++ G P +T
Sbjct: 450 PDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 108/286 (37%), Gaps = 40/286 (13%)
Query: 275 SLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 334
S TYN L LC D A ++ M + P+ ++S F +L A L
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 335 LEMDQKETCWPLDQDTNESLVK------------------DLSNHDTFSSLVNDYCAEDK 376
L+ + E C + +LVK ++ TF+ L+ C K
Sbjct: 162 LQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 377 AEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIY 433
AE AL+L PD V+Y L+ G K ++ L S +
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCK----------------SNELNKASEMFK 265
Query: 434 DILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG 493
D+ + + + ++ G+ G + EA+ D ML P +N+L+ +
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 494 GNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 539
G + A ++ +M+ +G + + +LI YC R ++S R
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDG-YC--RVGQVSQGFR 368
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 144/335 (42%), Gaps = 36/335 (10%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELY 116
SF ++ RL + + AE ++ M +CV ++ + C + +R+ +
Sbjct: 53 SFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRV---F 109
Query: 117 HQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 176
H+M + P++ Y ++ + + N++ A + M E GL P S + +I C+N
Sbjct: 110 HKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN 169
Query: 177 K-EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
+ L++ +EM +G PD + YG LI LC R+ EA+ LF EM+ + +P T
Sbjct: 170 DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVT 229
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS---------------------- 273
Y +L+ C + +E+ KG P T S
Sbjct: 230 YTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMM 289
Query: 274 -----PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELR 328
P++VTY LI GLC Q+ EA+E+L M L PD Y VISGF I + R
Sbjct: 290 ARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFR 349
Query: 329 KAFELKLEM-----DQKETCWPLDQDTNESLVKDL 358
+A EM W + T+ +V+ L
Sbjct: 350 EAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGL 384
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 141/299 (47%), Gaps = 21/299 (7%)
Query: 55 LVSFNAVIKRLC-GEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPY 109
+ S N +IK LC +G + + EM DPD TY TLIS C +
Sbjct: 156 VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR----------F 205
Query: 110 VRIVE---LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 166
RI E L+ +M ++ +P TY +I C V+EA+ L M KG+ P+ +Y
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTY 265
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
S ++ CK+ +A+E+ M+ +G P++ Y LI LC ++++ EA +L M L
Sbjct: 266 SSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNL 325
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 286
+G+ P Y ++ +C +F + + DE+I G P +T ++ + T N ++ GL
Sbjct: 326 QGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT-WNIHVKTSNEVVRGL 384
Query: 287 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
C P A + M + + + +++ + E +KA +L E+ + C P
Sbjct: 385 C-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI-VTDGCIP 441
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 96/231 (41%), Gaps = 52/231 (22%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++ ++I LCG + EA L+EM +P+ TY++L+ C+ ++ +
Sbjct: 227 VVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRS-------L 279
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ +EL+ M R PN TY +I C +++EAV +L M +GL P A Y ++I
Sbjct: 280 QAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVI 339
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL--------------------------- 203
S FC + +A EM+ GI P+ + +
Sbjct: 340 SGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSM 399
Query: 204 --------------LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 240
L++ LC + +A L E++ G P T+ L+
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 124/304 (40%), Gaps = 46/304 (15%)
Query: 213 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF 272
R ++ +F +M P + Y T++ + + + F + + G LP
Sbjct: 101 RPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIG-LP------ 153
Query: 273 SPSLVTYNALIHGLCFFQRP-DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 331
P++ + N LI LC D L+I MP+ DPD +Y +ISG R + +A
Sbjct: 154 -PTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAK 212
Query: 332 ELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL- 390
+L EM +K+ C P ++V T++SL+N C + A++ + +
Sbjct: 213 KLFTEMVEKD-CAP-------TVV-------TYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 391 --PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKS 447
P+ +Y L++GL K S A L + C P+ + Y LI C + +
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR--PNMVTYTTLITGLCKEQKIQE 315
Query: 448 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEML 507
VEL+ ++GL +P+ +Y +I C +A + EM+
Sbjct: 316 AVELLDRMNLQGL----------------KPDAGLYGKVISGFCAISKFREAANFLDEMI 359
Query: 508 HYGF 511
G
Sbjct: 360 LGGI 363
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/523 (22%), Positives = 214/523 (40%), Gaps = 93/523 (17%)
Query: 47 GKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD---P-DCVTYNTLISAACEAEKN 102
GK ++ +VI EG + EA V+ EM P + +L++ C+ +
Sbjct: 302 GKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNE- 360
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAE------ 156
+ ++L+++M L+P++ + M+ FC +E+A+ M
Sbjct: 361 ------LGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPS 414
Query: 157 ------------KGLSPHA------DSYSRIISR----------FCKNKEMGKALEMKVE 188
K SP A DS+ I+ FCK ++ A
Sbjct: 415 SVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKM 474
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 248
M KGI P+V Y ++ C + + AR +F EML +G+ P TY L++ + +
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 249 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM-PEMLL 307
+ + +++ ++F + V YN +I+GLC + +A E+L+ + E
Sbjct: 535 EQNAWDVINQM--------NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY 586
Query: 308 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSL 367
SY+++I GF ++ + A E EM + N TF+SL
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS---------------PNVVTFTSL 631
Query: 368 VNDYCAEDKAEMALKLRYQAQYLP---DSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHC 424
+N +C ++ ++AL++ ++ + + D +Y L++G KK + A LF +
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTA--YTLFSELPEL 689
Query: 425 LTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYN 484
+P+ +Y+ L+ GFR G ++ A M++ + Y
Sbjct: 690 GLMPNVSVYN---------------SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYT 734
Query: 485 LLIFDHCIGGNVHKAYDMYKEMLHYGFV----CHMFSVLALIK 523
+I GN++ A D+Y E+L G V HM V L K
Sbjct: 735 TMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 177/401 (44%), Gaps = 51/401 (12%)
Query: 137 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 196
LFC + +V+ A L++M +KG+ P+ Y+ ++ C+ K M A + EML+KG+ P
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
+ Y +LI + A D+ +M Y+T++ C G+ SK +
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
+I++ +S S +YN++I G D A+E R M E P+ V++++
Sbjct: 578 QNLIKE-------KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTS 630
Query: 317 VISGFRRIRELRKAFELKLEMDQKET--------------CWPLDQDTNESLVKDL---- 358
+I+GF + + A E+ EM E C D T +L +L
Sbjct: 631 LINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELG 690
Query: 359 --SNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVS-----YCLLLNGLHKKATSRF 411
N ++SL++ + K + A+ L Y+ + + D +S Y +++GL K
Sbjct: 691 LMPNVSVYNSLISGFRNLGKMDAAIDL-YK-KMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 412 AKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTM 471
A L+ + +P I++ + LV G +G +A++ + M
Sbjct: 749 ASD--LYSELLDLGIVPDEILHMV---------------LVNGLSKKGQFLKASKMLEEM 791
Query: 472 LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
++ P +Y+ +I H GN+++A+ ++ EML G V
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 148/334 (44%), Gaps = 39/334 (11%)
Query: 30 EKGLVSPPN----VLIPGFAAGK--------------ATTEKCLVSFNAVIKRLCGEGRI 71
EKGL P N +LI GF K + E V +N +I LC G+
Sbjct: 512 EKGL-EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQT 570
Query: 72 REAETVLQEMTDP-----DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSP 126
+A+ +LQ + C +YN++I + + VE Y +M SP
Sbjct: 571 SKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDS-------AVETYREMSENGKSP 623
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 186
N T+ +I FC NR++ A+ + M L +Y +I FCK +M A +
Sbjct: 624 NVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF 683
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
E+ + G+ P+V Y LI + ++ A DL+++M+ G+S TY T+++
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G + L E++ G + P + + L++GL + +A ++L M +
Sbjct: 744 GNINLASDLYSELLDLGIV--------PDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+ P+ + YS VI+G R L +AF L EM +K
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/549 (21%), Positives = 222/549 (40%), Gaps = 87/549 (15%)
Query: 39 VLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACE 98
VLI G A TT+ + A ++ E ++ V+ +PD + ++ + AAC+
Sbjct: 231 VLI-GVAGDNVTTQLLM---RASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACK 286
Query: 99 AEKNHNLSIPYVRIVELYHQMCVRELSP-NETTYRCMIRLFCDRNRVEEAVGILRLMAEK 157
V ++L +M + P ++ TY +I F +EEAV ++ M
Sbjct: 287 TPD-------LVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGF 339
Query: 158 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 217
G+ + + +++ +CK E+GKAL++ M ++G+ PD + ++++ C + +A
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 218 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE--------FSKVFHLQDEVIQKGFLPYYV 269
+ + M ++P T+++ CLK E F+ F + I GF+ +
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQG-CLKAESPEAALEIFNDSF---ESWIAHGFMCNKI 455
Query: 270 -------------TSF---------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 307
TSF P++V YN ++ C + D A I M E L
Sbjct: 456 FLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Query: 308 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSL 367
+P+ +YS +I GF + ++ ++ W + N S + +N ++++
Sbjct: 516 EPNNFTYSILIDGFFKNKD-------------EQNAWDVINQMNASNFE--ANEVIYNTI 560
Query: 368 VNDYC----AEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAH 423
+N C EM L + +Y SY +++G K + A + + ++
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSA--VETYREMSE 618
Query: 424 CLTIPSYIIYDILIEK-CANNEFKSVVE-------------------LVKGFRMRGLVNE 463
P+ + + LI C +N +E L+ GF + +
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKT 678
Query: 464 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 523
A + P +VYN LI G + A D+YK+M++ G C +F+ +I
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Query: 524 ALYCDERYN 532
L D N
Sbjct: 739 GLLKDGNIN 747
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 104/215 (48%), Gaps = 11/215 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYV 110
+V+F ++I C R+ A + EM D Y LI C K +++ Y
Sbjct: 625 VVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFC---KKNDMKTAYT 681
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
L+ ++ L PN + Y +I F + +++ A+ + + M G+S +Y+ +I
Sbjct: 682 ----LFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMI 737
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
K+ + A ++ E+LD GI PD + +L+ L + + L+A + +EM + ++
Sbjct: 738 DGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVT 797
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
P Y T++ + +G ++ F L DE+++KG +
Sbjct: 798 PNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 176/432 (40%), Gaps = 46/432 (10%)
Query: 123 ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 182
EL+P Y ++ + R++ AV LM ++ + P + ++S ++ + +A
Sbjct: 166 ELTPRAFNY--LLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 183 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 242
E+ +M+ G+ D LL++ +R+ EA +F+ ++ RG P G + V+A
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 243 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 302
C + L E+ K +P S TY ++I +EA+ ++ M
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVP-------ASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 303 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD 362
+ ++ +++++G+ + EL KA +L M++ E L D
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE------------EGLAPD---KV 381
Query: 363 TFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFY 419
FS +V +C + E A++ + + + P SV ++ G K + A +
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIF--- 438
Query: 420 IVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 479
+ S+I + + K + F +G V+ A M + P
Sbjct: 439 ----NDSFESWIAHGFMCNK-----------IFLLFCKQGKVDAATSFLKMMEQKGIEPN 483
Query: 480 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIR 539
YN ++ HC N+ A ++ EML G + F+ LI + + + + +W +
Sbjct: 484 VVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN-KDEQNAWDVI 542
Query: 540 NTLRSCNLNDSE 551
N + + N +E
Sbjct: 543 NQMNASNFEANE 554
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 166/362 (45%), Gaps = 44/362 (12%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
+ P+ T ++ FC N +++AV + M + G+ + +I CKN+ + AL
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
E+ M D+GI P+V Y LI LC RL +A EM + ++P T+ L++AY
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
+G+ SKV + +IQ S P++ TY++LI+GLC R DEA+++L M
Sbjct: 129 AKRGKLSKVDSVYKMMIQ--------MSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 304 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 363
P+ V+YS + +GF + + +L +M Q+ +N +
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA---------------ANTVS 225
Query: 364 FSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLH-----KKATSRFAK-- 413
++L+ Y K ++AL + +P+ SY ++L GL +KA SRF
Sbjct: 226 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQ 285
Query: 414 ------RLLLFYIVAH-----CLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVN 462
++ + I+ H C+ +Y ++ L K +FK+ ++ G+
Sbjct: 286 KTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRT 345
Query: 463 EA 464
EA
Sbjct: 346 EA 347
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 161/379 (42%), Gaps = 37/379 (9%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNH 103
K E +V+ ++++ C I++A V +M D V LI C+ +
Sbjct: 6 KLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK----N 61
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
L +P +E+ +M R +SPN TY +I C R+ +A L M K ++P+
Sbjct: 62 RLVVP---ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 118
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
++S +I + K ++ K + M+ I P+V Y LI LC R+ EA +
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M+ +G +P TY TL + L D++ Q+G + + V+ N LI
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG--------VAANTVSCNTLI 230
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
G + D AL + M L P+ SY+ V++G E+ KA + E QK
Sbjct: 231 KGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALS-RFEHMQK--- 286
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLL 400
T L + T++ +++ C + A L Y+ ++ PD +Y +++
Sbjct: 287 ------TRNDL-----DIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Query: 401 NGLHKKATSRFAKRLLLFY 419
L++ A L FY
Sbjct: 336 AELNRAGMRTEADALNRFY 354
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 136/359 (37%), Gaps = 84/359 (23%)
Query: 154 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 213
M + G+ P + S +++ FC + + A+ + +M GI DV +LI LC R
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 214 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 273
++ A ++ + M RG+S
Sbjct: 64 VVPALEVLKRMKDRGIS------------------------------------------- 80
Query: 274 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA--- 330
P++VTY++LI GLC R +A L M ++P+ +++SA+I + + +L K
Sbjct: 81 PNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSV 140
Query: 331 FELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK---LRYQA 387
+++ ++M + T+SSL+ C ++ + A+K L
Sbjct: 141 YKMMIQMSIDPNVF------------------TYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 388 QYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKS 447
P+ V+Y L NG K + +LL D + ++ S
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLL-----------------DDMPQRGVAANTVS 225
Query: 448 VVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
L+KG+ G ++ A M P YN+++ G V KA ++ M
Sbjct: 226 CNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 23/290 (7%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+N +I+ +C EGR E+ +L EM D P T N + C AE+ +V +
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIY--GCLAER-----CDFVGAL 529
Query: 114 ELYHQMCVRELSP--NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+L +M P TT+ +++ C+ R +A L +A +G H + + I
Sbjct: 530 DLLKKMRFYGFEPWIKHTTF--LVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
KN+ + + LE+ ++ G PDV AY +LI+ LC R +EA LF EM+ +G+ P
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY+++++ +C +GE + + Y +P ++TY +LIHGLC R
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSC--------IVRMYEDEKNPDVITYTSLIHGLCASGR 699
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
P EA+ M P+ +++ A+I G + +A EM++KE
Sbjct: 700 PSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKE 749
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 163/395 (41%), Gaps = 49/395 (12%)
Query: 122 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 181
+ + P+ + +I N+V+ AV +L + + GL P Y+ II CK +
Sbjct: 433 KAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEE 492
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
+L++ EM D G+ P + L + + A DL ++M G P + LV+
Sbjct: 493 SLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVK 552
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 301
C G D+V +GFL + V S A I GL + D LE+ R
Sbjct: 553 KLCENGRAVDACKYLDDVAGEGFLGHMVAS--------TAAIDGLIKNEGVDRGLELFRD 604
Query: 302 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT--NESLVKDLS 359
+ PD ++Y + I+ L KA C ++ D NE + K L
Sbjct: 605 ICANGHCPDVIAYHVL------IKALCKA------------CRTMEADILFNEMVSKGLK 646
Query: 360 -NHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRL 415
T++S+++ +C E + + L Y+ + PD ++Y L++GL A+ R ++ +
Sbjct: 647 PTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC--ASGRPSEAI 704
Query: 416 LLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRN 475
+ + P+ I + + L++G G EA M +
Sbjct: 705 FRWNEMKGKDCYPNRITF---------------MALIQGLCKCGWSGEALVYFREMEEKE 749
Query: 476 YRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
P+ AVY L+ N++ + +++EM+H G
Sbjct: 750 MEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 207/506 (40%), Gaps = 73/506 (14%)
Query: 51 TEKCLVS---FNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEKN 102
+C +S F I+ L G + EA +V + + P+ TYN L+ A ++ +
Sbjct: 134 NSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSS 193
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG-LSP 161
++ + R+ E+ + C ++ T +++++C+ + E A+ + + +G L
Sbjct: 194 -SVELVEARLKEM--RDCGFHF--DKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDE 248
Query: 162 HADSYSRIISRFCKNKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDL 220
H + ++ FCK ++ KA E+ +EML ++ I + Y +LI + R+ +A L
Sbjct: 249 HISTI--LVVSFCKWGQVDKAFEL-IEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQL 305
Query: 221 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 280
F++M GM+ YD L+ C + L E+ + G P
Sbjct: 306 FEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPP-----------DRG 354
Query: 281 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS----YSAVISGFRRIRELRKAFEL--- 333
L LC F E E+ R ++ D D+ S Y ++ GF R + +A+
Sbjct: 355 ILGKLLCSFS---EESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQN 411
Query: 334 ---KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY---QA 387
E D L +D N++++ D D+ S ++N +K +MA+ L + Q
Sbjct: 412 LMGNYESDGVSEIVKLLKDHNKAILPD---SDSLSIVINCLVKANKVDMAVTLLHDIVQN 468
Query: 388 QYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYI----IYDILIEKCANN 443
+P + Y ++ G+ K+ S + L L + PS IY L E+C
Sbjct: 469 GLIPGPMMYNNIIEGMCKEGRSE--ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERC--- 523
Query: 444 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
+F ++L+K R G + P L+ C G A
Sbjct: 524 DFVGALDLLKKMRFYG----------------FEPWIKHTTFLVKKLCENGRAVDACKYL 567
Query: 504 KEMLHYGFVCHMFSVLALIKALYCDE 529
++ GF+ HM + A I L +E
Sbjct: 568 DDVAGEGFLGHMVASTAAIDGLIKNE 593
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
PD + Y+ LI A C+A + I L+++M + L P TY MI +C
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADI-------LFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
++ + + M E +P +Y+ +I C + +A+ EM K +P+ +
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMA 724
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
LIQ LC EA F+EM + M P Y +LV ++ + F + E++ KG
Sbjct: 725 LIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKG 784
Query: 264 FLPYYV 269
P V
Sbjct: 785 RFPVSV 790
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 13/182 (7%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAAC-EAEKNHNLSIPY 109
+++++ +IK LC R EA+ + EM P TYN++I C E E + LS
Sbjct: 614 VIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC-- 671
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
IV +Y E +P+ TY +I C R EA+ M K P+ ++ +
Sbjct: 672 --IVRMYED----EKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMAL 725
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I CK G+AL EM +K + PD Y L+ + +F+EM+ +G
Sbjct: 726 IQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGR 785
Query: 230 SP 231
P
Sbjct: 786 FP 787
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 176/396 (44%), Gaps = 48/396 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
L +F ++ L +GR +A+ + +MT P+ VTY LIS C+ +
Sbjct: 198 LYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDAR---- 253
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+L+++M P+ + ++ FC R+ EA +LRL + G YS +I
Sbjct: 254 ---KLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ + +A E+ ML K I PD+ Y +LIQ L ++ +A L M +G+S
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGIS 370
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y+ +++A C +G + LQ E+ + T P T+ LI +C
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSE--------TESFPDACTHTILICSMCRNG 422
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL--KLEMDQKETCW-PLD 347
EA EI + + P +++A+I G + EL++A L K+E+ + + + L
Sbjct: 423 LVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLS 482
Query: 348 QDTNESL------------VKDLSNH-DTFSS--------LVNDYCAEDKAEMALKLRYQ 386
N S +DL++ DT SS L+N +C + ALKL
Sbjct: 483 HSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNV 542
Query: 387 AQ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFY 419
Q PDSV+Y L+NGLH+ R + LFY
Sbjct: 543 LQLKGLSPDSVTYNTLINGLHR--VGREEEAFKLFY 576
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 202/488 (41%), Gaps = 56/488 (11%)
Query: 39 VLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACE 98
VLI +A EK + SF GR++E + PD TYN ++
Sbjct: 132 VLISAYAK-MGMAEKAVESF----------GRMKEFDC------RPDVFTYNVILRVMMR 174
Query: 99 AEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG 158
E + ++ +Y++M SPN T+ ++ + R +A + M +G
Sbjct: 175 EE------VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228
Query: 159 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 218
+SP+ +Y+ +IS C+ A ++ EM G +PD A+ L+ C R++EA
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 219 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 278
+L + G G R Y +L++ +++ F L +++K + P ++
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK--------NIKPDIIL 340
Query: 279 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 338
Y LI GL + ++AL++L MP + PD Y+AVI L + L+LEM
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMS 400
Query: 339 QKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCL 398
+ E+ +P D T+ L+ S+ + + E+ ++ ++ P ++
Sbjct: 401 ETES-FP-DACTHTILI---------CSMCRNGLVREAEEIFTEIE-KSGCSPSVATFNA 448
Query: 399 LLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMR 458
L++GL K + A+ LL H + + + + N F ++VE
Sbjct: 449 LIDGLCKSGELKEARLLL------HKMEVGRPASLFLRLSHSGNRSFDTMVE-------S 495
Query: 459 GLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSV 518
G + +A R P+ YN+LI C G++ A + + G +
Sbjct: 496 GSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTY 555
Query: 519 LALIKALY 526
LI L+
Sbjct: 556 NTLINGLH 563
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 156/369 (42%), Gaps = 38/369 (10%)
Query: 158 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR-LLE 216
G+S + + +IS + K KA+E M + PDV Y ++++++ + +
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 217 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 276
A ++ EML SP T+ L++ KG S + D++ +G SP+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG--------ISPNR 233
Query: 277 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLE 336
VTY LI GLC D+A ++ M PD V+++A++ GF ++ + +AFEL L
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL-LR 292
Query: 337 MDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSY 396
+ +K+ + L SL+ L ++ Y K + PD + Y
Sbjct: 293 LFEKDG-FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIK----------PDIILY 341
Query: 397 CLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFR 456
+L+ GL K A +LL ++PS I C N ++K
Sbjct: 342 TILIQGLSKAGKIEDALKLL--------SSMPSKGISPDTY--CYN-------AVIKALC 384
Query: 457 MRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMF 516
RGL+ E + M P+ + +LI C G V +A +++ E+ G +
Sbjct: 385 GRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVA 444
Query: 517 SVLALIKAL 525
+ ALI L
Sbjct: 445 TFNALIDGL 453
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 115/216 (53%), Gaps = 15/216 (6%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P+ +YN L+ A C N +LSI Y +L+ +M R++ P+ +Y+ +I+ FC + +
Sbjct: 188 PNTRSYNLLMQAFC---LNDDLSIAY----QLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
V A+ +L M KG P SY+ +++ C+ ++ +A ++ M KG PD+ Y
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
+I C + R ++AR + +ML G SP +Y TL+ C +G F + +E+I KG
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 299
F P++ S N L+ G C F + +EA +++
Sbjct: 361 FSPHFSVS--------NCLVKGFCSFGKVEEACDVV 388
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 12/253 (4%)
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ EL+ + + PN +Y +++ FC + + A + M E+ + P DSY +I
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
FC+ ++ A+E+ +ML+KG PD +Y L+ LC + +L EA L M L+G +
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y+T++ +C + + D+++ G SP+ V+Y LI GLC
Sbjct: 293 PDLVHYNTMILGFCREDRAMDARKVLDDMLSNG--------CSPNSVSYRTLIGGLCDQG 344
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE-LKLEMDQKETCWPLDQD 349
DE + L M P + ++ GF ++ +A + +++ M ET L D
Sbjct: 345 MFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET---LHSD 401
Query: 350 TNESLVKDLSNHD 362
T E ++ + N D
Sbjct: 402 TWEMVIPLICNED 414
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 9/212 (4%)
Query: 111 RIVELYHQMCVRELSPN-ETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
+++ +++M +P + R + L R +++A + + G+ P+ SY+ +
Sbjct: 137 KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLL 196
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
+ FC N ++ A ++ +ML++ + PDV +Y +LIQ C + ++ A +L +ML +G
Sbjct: 197 MQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF 256
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P +Y TL+ + C K + + + L + KG +P LV YN +I G C
Sbjct: 257 VPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG--------CNPDLVHYNTMILGFCRE 308
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
R +A ++L M P+ VSY +I G
Sbjct: 309 DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 18/211 (8%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
S+ +I+ C +G++ A +L +M + PD ++Y TL+++ C ++
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRK----------TQL 276
Query: 113 VELYHQMCVREL---SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
E Y +C +L +P+ Y MI FC +R +A +L M G SP++ SY +
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I C + + EM+ KG P L++ C ++ EA D+ + ++ G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGE 396
Query: 230 SPGGRTYDTLVEAYCLKGEFSKV-FHLQDEV 259
+ T++ ++ C + E K+ L+D V
Sbjct: 397 TLHSDTWEMVIPLICNEDESEKIKLFLEDAV 427
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 75/160 (46%), Gaps = 11/160 (6%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVR 111
+S+ ++ LC + ++REA +L M +PD V YNT+I C ++ +
Sbjct: 261 LSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR----- 315
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
++ M SPN +YR +I CD+ +E L M KG SPH + ++
Sbjct: 316 --KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVK 373
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQ 211
FC ++ +A ++ ++ G + ++I L+C++
Sbjct: 374 GFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE 413
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 150/339 (44%), Gaps = 42/339 (12%)
Query: 62 IKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYH 117
+K L EG + EA V + D VT N+++ +A K R EL+
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLD-------RFWELHK 204
Query: 118 QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 177
+M E RC+IR CD V E +L+ ++GL P Y+++IS FC+
Sbjct: 205 EMVESEFDSERI--RCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIG 262
Query: 178 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 237
E+ M+ FP ++ Y +I+ LC ++ LEA +F+ + +G +P Y
Sbjct: 263 NYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYT 322
Query: 238 TLVEAYCLKGEFSKVFHLQDEVIQKGFLP----YYV-----------------------T 270
T++ +C KG L E+I+KG P Y V
Sbjct: 323 TMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN 382
Query: 271 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 330
+ ++++ N +I G C + DEA EI + M E + P+ ++Y+A+I GF + ++ K
Sbjct: 383 GYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKG 442
Query: 331 FELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 369
LKL + K +LV++L D+ ++ +N
Sbjct: 443 --LKLYKELKALGLKPSGMAYAALVRNLKMSDSVATSLN 479
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 27/270 (10%)
Query: 61 VIKRLCGEGRIREA----ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELY 116
+I+ LC G + E + L++ DP Y LIS CE Y + E+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGN-------YACMSEVL 271
Query: 117 HQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 176
H M P+ Y+ +I+ C + EA I + + +KG +P Y+ +I FC+
Sbjct: 272 HTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEK 331
Query: 177 KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR----LLEARDLFQEMLLRGMSPG 232
+G A ++ EM+ KG+ P+ AY ++I H +R L+EA + EML G
Sbjct: 332 GWLGSARKLWFEMIKKGMRPNEFAYNVMIH--GHFKRGEISLVEA--FYNEMLRNGYGGT 387
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
+ +T+++ +C G+ + F + + + G +P+ +TYNALI G C +
Sbjct: 388 MLSCNTMIKGFCSHGKSDEAFEIFKNMSETGV--------TPNAITYNALIKGFCKENKV 439
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFR 322
++ L++ + + + L P ++Y+A++ +
Sbjct: 440 EKGLKLYKELKALGLKPSGMAYAALVRNLK 469
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 10/217 (4%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
P T ++ + VEEA+ + ++ + G+S + + ++ K +++ +
Sbjct: 141 FKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFW 200
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
E+ EM++ D LI+ LC + E +L ++ L +G+ PG Y L+ +
Sbjct: 201 ELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGF 258
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
C G ++ + + +I PS+ Y +I GLC ++ EA I + +
Sbjct: 259 CEIGNYACMSEVLHTMIAWNHF--------PSMYIYQKIIKGLCMNKKQLEAYCIFKNLK 310
Query: 304 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+ PD V Y+ +I GF L A +L EM +K
Sbjct: 311 DKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 163/385 (42%), Gaps = 61/385 (15%)
Query: 7 VSFTVATLKTFRIRGFAAGKATTE--------KGLVSPPNVLIPGFAAGKATTEKCLVSF 58
VS+T+ FR AGK T + VSP N G K +++
Sbjct: 150 VSYTILINGLFR-----AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204
Query: 59 NAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQ 118
V AE + V YN LIS C+A + I ++ Y
Sbjct: 205 EMV------------AEEIKSARVKLSTVVYNALISGFCKAGR-----IEKAEALKSY-- 245
Query: 119 MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 178
M P+ TY ++ + D N ++ A G++ M G+ A SY++++ R C+
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 179 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 238
K V+ ++ F DV +Y LI+ C +A LF+EM +GM TY +
Sbjct: 306 PDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTS 365
Query: 239 LVEAYCLKGEFSKVFHLQDEVIQKGFLP---YYVT------------------------S 271
L++A+ +G S L D++ + G P +Y T
Sbjct: 366 LIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHE 425
Query: 272 FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 331
+P ++YN+LI GLC R EA+++ M PDE+++ +I G R ++L A+
Sbjct: 426 ITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAY 485
Query: 332 ELKLEMDQKETCWPLDQDTNESLVK 356
++ +M K + LD+D +++L+K
Sbjct: 486 KVWDQMMDKG--FTLDRDVSDTLIK 508
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 186/502 (37%), Gaps = 74/502 (14%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNHNLSIPYVRIV 113
+N I L E R AE + +M TY+ IS C+ +K + I
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKK-------FDLID 99
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
L M P+ + + L C N+V AV M ++G P SY+ +I+
Sbjct: 100 ALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGL 159
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG-MSPG 232
+ ++ A+E+ M+ G+ PD A L+ LCH R++ A ++ E + +
Sbjct: 160 FRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLS 219
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQ----------DEVIQKGFLPYYV------------- 269
Y+ L+ +C G K L+ D V L YY
Sbjct: 220 TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMA 279
Query: 270 ----TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 325
+ +YN L+ C PD+ + E D VSYS +I F R
Sbjct: 280 EMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRAS 339
Query: 326 ELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY 385
RKA+ L EM QK + N T++SL+ + E + +A KL
Sbjct: 340 NTRKAYRLFEEMRQKGM---------------VMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 386 QAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCAN 442
Q L PD + Y +L+ L K +Y +++ +IE
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGN-----------------VDKAYGVFNDMIEHEIT 427
Query: 443 NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDM 502
+ S L+ G G V EA + + M + P+ + +I G + AY +
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKV 487
Query: 503 YKEMLHYGFVCHMFSVLALIKA 524
+ +M+ GF LIKA
Sbjct: 488 WDQMMDKGFTLDRDVSDTLIKA 509
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 11/194 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYV 110
+VS++ +I+ C R+A + +EM + VTY +LI A E N +++
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR-EGNSSVA---- 379
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+L QM LSP+ Y ++ C V++A G+ M E ++P A SY+ +I
Sbjct: 380 --KKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
S C++ + +A+++ +M K PD + +I L ++L A ++ +M+ +G +
Sbjct: 438 SGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFT 497
Query: 231 PGGRTYDTLVEAYC 244
DTL++A C
Sbjct: 498 LDRDVSDTLIKASC 511
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 160/402 (39%), Gaps = 48/402 (11%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK--EMGKALEMKV 187
YR I ++ AV + M + Y+R I + E+ +A+ +
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 188 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
+ + + P Y I LC ++ L +M G P ++ ++ C +
Sbjct: 71 KPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCREN 128
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 307
+ ++Q+G P +V+Y LI+GL + +A+EI M +
Sbjct: 129 KVGFAVQTFFCMVQRG--------REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGV 180
Query: 308 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSL 367
PD + +A++ G R++ A+E+ E + + VK LS +++L
Sbjct: 181 SPDNKACAALVVGLCHARKVDLAYEMVAE------------EIKSARVK-LSTV-VYNAL 226
Query: 368 VNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHC 424
++ +C + E A L+ + PD V+Y +LLN + + A+ ++ +V
Sbjct: 227 ISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMA-EMVRSG 285
Query: 425 LTIPSYIIYDILIEKC-ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 483
+ + +Y +L C ++ K +VK RG + + Y
Sbjct: 286 IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVS-----------------Y 328
Query: 484 NLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
+ LI C N KAY +++EM G V ++ + +LIKA
Sbjct: 329 STLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 143/298 (47%), Gaps = 25/298 (8%)
Query: 52 EKCL---VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHN 104
E+C+ V++N +I C G++ A+ V+ M + P+ VT NT++ C ++H
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC---RHHG 456
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
L++ V + M + N TY +I C + VE+A+ M E G SP A
Sbjct: 457 LNMAVV----FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFP-DVHAYGLLIQLLCHQRRLLEARDLFQE 223
Y +IS C+ + A+ + VE L +G F D+ AY +LI L C + + ++ +
Sbjct: 513 IYYALISGLCQVRRDHDAIRV-VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M G P TY+TL+ + +F V + +++ + G P++ TY A+I
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG--------LDPTVTTYGAVI 623
Query: 284 HGLCFFQRPDEALEILRGMP-EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
C DEAL++ + M ++P+ V Y+ +I+ F ++ +A LK EM K
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 207/514 (40%), Gaps = 90/514 (17%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAAC---EAEKNHNLSIPYVRIVEL 115
N V+ L G + +A VL EM + V I+A E K L+ +I+ L
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEE--KIIAL 246
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
+ +SPN I C R A IL + + A ++ ++S +
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGR 306
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
N ++ + ++ ++M + I PDV G+LI LC RR+ EA ++F++M + G
Sbjct: 307 NMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVI 366
Query: 236 ------YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
++TL++ C G + +E++ + L P+ VTYN LI G C
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEERCV---PNAVTYNCLIDGYCRA 419
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
+ + A E++ M E + P+ V+ + ++ G R L A ++M+++
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-------- 471
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL---KLRYQAQYLPDSVSYCLLLNGL--- 403
VK N T+ +L++ C+ E A+ + +A PD+ Y L++GL
Sbjct: 472 -----VK--GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 404 ----------HKKATSRFAKRLLLFYI-------------VAHCLT-------IPSYIIY 433
K F+ LL + + V LT P I Y
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 434 DILIEKCA-NNEFKSVVELVKGFRMRGL-------------------VNEAARA-RDTML 472
+ LI + +F+SV +++ R GL ++EA + +D L
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
H P +YN+LI GN +A + +EM
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 12/207 (5%)
Query: 60 AVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
A+I LC R +A V++++ + D + YN LI C+ ++ E+
Sbjct: 516 ALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAE-------KVYEM 568
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
M P+ TY +I F E ++ M E GL P +Y +I +C
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 176 NKEMGKALEMKVEM-LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
E+ +AL++ +M L + P+ Y +LI +A L +EM ++ + P
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
TY+ L + K + + L DE+++
Sbjct: 689 TYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 18/179 (10%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD-------PDCVTYNTLISAACEAEKNHNLSI 107
L+++N +I C + AE V + +TD PD +TYNTLIS + +
Sbjct: 546 LLAYNMLIGLFCDKN---NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD------ 596
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMA-EKGLSPHADSY 166
+ + + QM L P TTY +I +C ++EA+ + + M ++P+ Y
Sbjct: 597 -FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
+ +I+ F K G+AL +K EM K + P+V Y L + L + + L EM+
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMV 714
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 143/298 (47%), Gaps = 25/298 (8%)
Query: 52 EKCL---VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHN 104
E+C+ V++N +I C G++ A+ V+ M + P+ VT NT++ C ++H
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC---RHHG 456
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
L++ V + M + N TY +I C + VE+A+ M E G SP A
Sbjct: 457 LNMAVV----FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFP-DVHAYGLLIQLLCHQRRLLEARDLFQE 223
Y +IS C+ + A+ + VE L +G F D+ AY +LI L C + + ++ +
Sbjct: 513 IYYALISGLCQVRRDHDAIRV-VEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTD 571
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M G P TY+TL+ + +F V + +++ + G P++ TY A+I
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG--------LDPTVTTYGAVI 623
Query: 284 HGLCFFQRPDEALEILRGMP-EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
C DEAL++ + M ++P+ V Y+ +I+ F ++ +A LK EM K
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 207/514 (40%), Gaps = 90/514 (17%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAAC---EAEKNHNLSIPYVRIVEL 115
N V+ L G + +A VL EM + V I+A E K L+ +I+ L
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEE--KIIAL 246
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
+ +SPN I C R A IL + + A ++ ++S +
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGR 306
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
N ++ + ++ ++M + I PDV G+LI LC RR+ EA ++F++M + G
Sbjct: 307 NMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVI 366
Query: 236 ------YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
++TL++ C G + +E++ + L P+ VTYN LI G C
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEA----EELLVRMKLEERCV---PNAVTYNCLIDGYCRA 419
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
+ + A E++ M E + P+ V+ + ++ G R L A ++M+++
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-------- 471
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL---KLRYQAQYLPDSVSYCLLLNGL--- 403
VK N T+ +L++ C+ E A+ + +A PD+ Y L++GL
Sbjct: 472 -----VK--GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 404 ----------HKKATSRFAKRLLLFYI-------------VAHCLT-------IPSYIIY 433
K F+ LL + + V LT P I Y
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 434 DILIEKCA-NNEFKSVVELVKGFRMRGL-------------------VNEAARA-RDTML 472
+ LI + +F+SV +++ R GL ++EA + +D L
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
H P +YN+LI GN +A + +EM
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 124/313 (39%), Gaps = 73/313 (23%)
Query: 24 AGKATTEKGLVS-------PPNVLIPGFAAG-------------------KATTEKCLVS 57
AGK T K +VS PNV+ G K + +V+
Sbjct: 419 AGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 58 FNAVIKRLCGEGRIREA----ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+ +I C + +A E +L+ PD Y LIS C+ ++H+ +R+V
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD----AIRVV 534
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E + S + Y +I LFCD+N E+ +L M ++G P + +Y+ +IS F
Sbjct: 535 EKLKEGG---FSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFF 591
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG-MSPG 232
K+K+ M +M + G+ P V YG +I C L EA LF++M L ++P
Sbjct: 592 GKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPN 651
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQ-----------------------------------D 257
Y+ L+ A+ G F + L+ D
Sbjct: 652 TVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMD 711
Query: 258 EVIQKGFLPYYVT 270
E++++ P +T
Sbjct: 712 EMVEQSCEPNQIT 724
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD-------PDCVTYNTLISAACEAEKNHNLSI 107
L+++N +I C + AE V + +TD PD +TYNTLIS + +
Sbjct: 546 LLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD------ 596
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMA-EKGLSPHADSY 166
+ + + QM L P TTY +I +C ++EA+ + + M ++P+ Y
Sbjct: 597 -FESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
+ +I+ F K G+AL +K EM K + P+V Y L + L + + L EM+
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKV 252
+ P T + L+E E K+
Sbjct: 716 QSCEPNQITMEILMERLSGSDELVKL 741
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 199/475 (41%), Gaps = 50/475 (10%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
++N+VI L EG+ + V EM + PD +TY+ LIS+ + +N +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDS------- 251
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ L+ +M + P E Y ++ ++ +VE+A+ + M G SP +Y+ +I
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K + +A +ML G+ PDV L+ +L R+ E ++F EM + +P
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
+Y+T+++A F H+ + + F S SPS TY+ LI G C R
Sbjct: 372 TVVSYNTVIKAL-----FESKAHVSE--VSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
++AL +L M E P +Y ++I+ + + A EL E+ KE +
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL--KENFGNVSSRVY 482
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRF 411
++K S V+ + +++ Q PD +Y L++G+ K
Sbjct: 483 AVMIKHFGKCGKLSEAVDLFN---------EMKNQGSG-PDVYAYNALMSGMVKAGMINE 532
Query: 412 AKRLLLFYIVAHCLT-IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDT 470
A LL C I S+ I ++ GF G+ A +T
Sbjct: 533 ANSLLRKMEENGCRADINSHNI------------------ILNGFARTGVPRRAIEMFET 574
Query: 471 MLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
+ H +P+G YN L+ G +A M +EM GF + +++ A+
Sbjct: 575 IKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 138/312 (44%), Gaps = 20/312 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V N ++ L GR+ E V EM P V+YNT+I A E++ + +
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS------ 391
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ + +M +SP+E TY +I +C NRVE+A+ +L M EKG P +Y +I
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ K K A E+ E+ + Y ++I+ +L EA DLF EM +G
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y+ L+ G ++ L ++ + G + ++N +++G
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENG--------CRADINSHNIILNGFARTG 563
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
P A+E+ + + PD V+Y+ ++ F +A + EM K+ + D T
Sbjct: 564 VPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM--KDKGFEYDAIT 621
Query: 351 NESLVKDLSNHD 362
S++ + N D
Sbjct: 622 YSSILDAVGNVD 633
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 35/328 (10%)
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L++ L + + +A +F + R P TY++++ +G+ KV + E+ +G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
P +TY+ALI R D A+ + M + + P E Y+ ++ + +
Sbjct: 228 -------DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFK 280
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
+ ++ KA +L EM ++ C P E L+K L D+A K
Sbjct: 281 VGKVEKALDLFEEM-KRAGCSPTVYTYTE-LIKGLGKAGRV----------DEAYGFYKD 328
Query: 384 RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANN 443
+ PD V L+N L K R + +F + P+ + Y+ +I+
Sbjct: 329 MLRDGLTPDVVFLNNLMNILGK--VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKAL--- 383
Query: 444 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
F + V+E + D M + P Y++LI +C V KA +
Sbjct: 384 -----------FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLL 432
Query: 504 KEMLHYGFVCHMFSVLALIKALYCDERY 531
+EM GF + +LI AL +RY
Sbjct: 433 EEMDEKGFPPCPAAYCSLINALGKAKRY 460
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 150/322 (46%), Gaps = 30/322 (9%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+++ + +C G + A T+ QE+ + PDCV Y T+I C + +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD-------KAF 428
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+ + + P+ TT +I + +A + R M +GL +Y+ ++ +
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
K ++ K E+ EM GI PDV Y +LI + + + EA ++ E++ RG P
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF--SPSLVTYNALIHGLCFFQR 291
+ ++ + +G+F + F L +Y+ P +VT +AL+HG C QR
Sbjct: 549 LAFTDVIGGFSKRGDFQEAF----------ILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
++A+ + + + L PD V Y+ +I G+ + ++ KA EL M Q+ P ++ T+
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML-P-NESTH 656
Query: 352 ESLV-----KDLSNHDTFSSLV 368
+LV K N +T +S++
Sbjct: 657 HALVLGLEGKRFVNSETHASML 678
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 150/355 (42%), Gaps = 40/355 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+F I +LC G ++EA +VL ++ D V+ +++I C+ K
Sbjct: 306 IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPE------- 358
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++L H +R PN Y + C + A I + + E GL P Y+ +I
Sbjct: 359 EAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMI 415
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+C KA + +L G P + +LI + +A +F+ M G+
Sbjct: 416 DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
TY+ L+ Y + +KVF L DE+ G SP + TYN LIH +
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG--------ISPDVATYNILIHSMVVRG 527
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
DEA EI+ + P ++++ VI GF + + ++AF L M D
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM--------ADLRM 579
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNG 402
+V T S+L++ YC + E A+ L + A PD V Y L++G
Sbjct: 580 KPDVV-------TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 165/391 (42%), Gaps = 44/391 (11%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
+ P+ + I C ++EA +L + G+S + S S +I FCK +GK
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK---VGKPE 358
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
E + + P++ Y + +C +L A +FQE+ G+ P Y T+++ Y
Sbjct: 359 EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
C G K F +++ G PSL T LI F +A + R M
Sbjct: 419 CNLGRTDKAFQYFGALLKSGN--------PPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 304 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 363
L D V+Y+ ++ G+ + +L K FEL +D+ + + D++ ++
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFEL------------IDEMRSAGISPDVATYNI 518
Query: 364 F--SSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIV 421
S +V Y D+A + + ++P ++++ ++ G K+ F + +L++ +
Sbjct: 519 LIHSMVVRGYI--DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD--FQEAFILWFYM 574
Query: 422 AHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 481
A P + C+ L+ G+ + +A + +L +P+
Sbjct: 575 ADLRMKPDVV-------TCS--------ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 482 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
+YN LI +C G++ KA ++ M+ G +
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 145/373 (38%), Gaps = 57/373 (15%)
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL--LE-ARDLFQ 222
+S +I + +++ AL++ ++ GIFP + G+ I LL R+ LE AR+ +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFP---SRGVCISLLKEILRVHGLELAREFVE 260
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 282
ML RG + YC G F K + L + G P +V +
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG--------IRPDIVAFTVF 312
Query: 283 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 342
I LC EA +L + + D VS S+VI GF ++ + +A +L +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-- 370
Query: 343 CWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLL 399
N +SS +++ C+ +A + ++ LPD V Y +
Sbjct: 371 ----------------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 400 LNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC--------ANNEFKSVV-- 449
++G R K F + PS ILI C A + F+++
Sbjct: 415 IDGYCN--LGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 450 ----------ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 499
L+ G+ +N+ D M P+ A YN+LI + G + +A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 500 YDMYKEMLHYGFV 512
++ E++ GFV
Sbjct: 533 NEIISELIRRGFV 545
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 150/322 (46%), Gaps = 30/322 (9%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+++ + +C G + A T+ QE+ + PDCV Y T+I C + +
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD-------KAF 428
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+ + + P+ TT +I + +A + R M +GL +Y+ ++ +
Sbjct: 429 QYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGY 488
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
K ++ K E+ EM GI PDV Y +LI + + + EA ++ E++ RG P
Sbjct: 489 GKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPST 548
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSF--SPSLVTYNALIHGLCFFQR 291
+ ++ + +G+F + F L +Y+ P +VT +AL+HG C QR
Sbjct: 549 LAFTDVIGGFSKRGDFQEAF----------ILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
++A+ + + + L PD V Y+ +I G+ + ++ KA EL M Q+ P ++ T+
Sbjct: 599 MEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML-P-NESTH 656
Query: 352 ESLV-----KDLSNHDTFSSLV 368
+LV K N +T +S++
Sbjct: 657 HALVLGLEGKRFVNSETHASML 678
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 150/355 (42%), Gaps = 40/355 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+F I +LC G ++EA +VL ++ D V+ +++I C+ K
Sbjct: 306 IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPE------- 358
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++L H +R PN Y + C + A I + + E GL P Y+ +I
Sbjct: 359 EAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMI 415
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+C KA + +L G P + +LI + +A +F+ M G+
Sbjct: 416 DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK 475
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
TY+ L+ Y + +KVF L DE+ G SP + TYN LIH +
Sbjct: 476 LDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG--------ISPDVATYNILIHSMVVRG 527
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
DEA EI+ + P ++++ VI GF + + ++AF L M D
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYM--------ADLRM 579
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNG 402
+V T S+L++ YC + E A+ L + A PD V Y L++G
Sbjct: 580 KPDVV-------TCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 165/391 (42%), Gaps = 44/391 (11%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
+ P+ + I C ++EA +L + G+S + S S +I FCK +GK
Sbjct: 302 IRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK---VGKPE 358
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
E + + P++ Y + +C +L A +FQE+ G+ P Y T+++ Y
Sbjct: 359 EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
C G K F +++ G PSL T LI F +A + R M
Sbjct: 419 CNLGRTDKAFQYFGALLKSGN--------PPSLTTSTILIGACSRFGSISDAESVFRNMK 470
Query: 304 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 363
L D V+Y+ ++ G+ + +L K FEL +D+ + + D++ ++
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFEL------------IDEMRSAGISPDVATYNI 518
Query: 364 F--SSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIV 421
S +V Y D+A + + ++P ++++ ++ G K+ F + +L++ +
Sbjct: 519 LIHSMVVRGYI--DEANEIISELIRRGFVPSTLAFTDVIGGFSKRGD--FQEAFILWFYM 574
Query: 422 AHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGA 481
A P + C+ L+ G+ + +A + +L +P+
Sbjct: 575 ADLRMKPDVV-------TCS--------ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Query: 482 VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
+YN LI +C G++ KA ++ M+ G +
Sbjct: 620 LYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 145/373 (38%), Gaps = 57/373 (15%)
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRL--LE-ARDLFQ 222
+S +I + +++ AL++ ++ GIFP + G+ I LL R+ LE AR+ +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFP---SRGVCISLLKEILRVHGLELAREFVE 260
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 282
ML RG + YC G F K + L + G P +V +
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYG--------IRPDIVAFTVF 312
Query: 283 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 342
I LC EA +L + + D VS S+VI GF ++ + +A +L +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-- 370
Query: 343 CWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLL 399
N +SS +++ C+ +A + ++ LPD V Y +
Sbjct: 371 ----------------PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 400 LNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC--------ANNEFKSVV-- 449
++G R K F + PS ILI C A + F+++
Sbjct: 415 IDGYCN--LGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 450 ----------ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 499
L+ G+ +N+ D M P+ A YN+LI + G + +A
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 500 YDMYKEMLHYGFV 512
++ E++ GFV
Sbjct: 533 NEIISELIRRGFV 545
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 140/288 (48%), Gaps = 25/288 (8%)
Query: 51 TEKCLVSFNAVIKRLCGEGRIREAE----TVLQEMTDPDCVTYNTLISAACEAEKNHNLS 106
T KC +N ++ L G + E + +L+++ PD T+NTL++ C+
Sbjct: 119 TPKC---YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCK-------- 167
Query: 107 IPYVRIVELYHQMCVRE-LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
+ YV + Y ++ P+ TY I C R V+ A + + M + G + S
Sbjct: 168 LGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVS 227
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y+++I + K++ +AL + V+M D P+V Y +LI LC + EA +LF++M
Sbjct: 228 YTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMS 287
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
G+ P Y L++++C + L + +++ G + P+++TYNALI G
Sbjct: 288 ESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM--------PNVITYNALIKG 339
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
C + +A+ +L M E L PD ++Y+ +I+G L A+ L
Sbjct: 340 FC-KKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRL 386
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 20/261 (7%)
Query: 55 LVSFNAVIKRLCGEGRIREAET----VLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+ +FN ++ C G + EA+ ++Q DPD TY + I+ C + + +
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC---RRKEVDAAFK 211
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E+ C R NE +Y +I + +++EA+ +L M + P+ +Y+ +I
Sbjct: 212 VFKEMTQNGCHR----NEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLI 267
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
C + + +A+ + +M + GI PD Y +LIQ C L EA L + ML G+
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY+ L++ +C K K L +++++ +P L+TYN LI G C
Sbjct: 328 PNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNLVP--------DLITYNTLIAGQCSSG 378
Query: 291 RPDEALEILRGMPEMLLDPDE 311
D A +L M E L P++
Sbjct: 379 NLDSAYRLLSLMEESGLVPNQ 399
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 159/392 (40%), Gaps = 60/392 (15%)
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 186
N T+Y ++ L C + E I LM + S ++ + + FC+ G + E+K
Sbjct: 59 NVTSYASLVTLLCSQEIPYEVPKITILMIK---SCNSVRDALFVVDFCRTMRKGDSFEIK 115
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
++ K Y L+ L + E + L+ EML +SP T++TLV YC
Sbjct: 116 YKLTPK-------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKL 168
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G + +IQ G P Y T Y + I G C + D A ++ + M +
Sbjct: 169 GYVVEAKQYVTWLIQAGCDPDYFT--------YTSFITGHCRRKEVDAAFKVFKEMTQNG 220
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 366
+EVSY+ +I G +++ +A L ++M + + C P N T++
Sbjct: 221 CHRNEVSYTQLIYGLFEAKKIDEALSLLVKM-KDDNCCP--------------NVRTYTV 265
Query: 367 LVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAH 423
L++ C + A+ L Q + PD Y +L+ T A LL H
Sbjct: 266 LIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL-----EH 320
Query: 424 CLT---IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG 480
L +P+ I Y+ LI KGF + V++A ML +N P+
Sbjct: 321 MLENGLMPNVITYNALI---------------KGFCKKN-VHKAMGLLSKMLEQNLVPDL 364
Query: 481 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
YN LI C GN+ AY + M G V
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLV 396
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 12/184 (6%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVR 111
VS+ +I L +I EA ++L +M D +C TY LI A C + +
Sbjct: 226 VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKS-------E 278
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ L+ QM + P++ Y +I+ FC + ++EA G+L M E GL P+ +Y+ +I
Sbjct: 279 AMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIK 338
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
FCK K + KA+ + +ML++ + PD+ Y LI C L A L M G+ P
Sbjct: 339 GFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVP 397
Query: 232 GGRT 235
RT
Sbjct: 398 NQRT 401
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 142/298 (47%), Gaps = 25/298 (8%)
Query: 52 EKCL---VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHN 104
E+C V++N +I C G++ A+ V+ M + P+ VT NT++ C ++H
Sbjct: 400 ERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMC---RHHG 456
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
L++ V + M + N TY +I C + VE+A+ M E G SP A
Sbjct: 457 LNMAVV----FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAK 512
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFP-DVHAYGLLIQLLCHQRRLLEARDLFQE 223
Y +IS C+ + A+ + VE L +G F D+ AY +LI L C + + ++ +
Sbjct: 513 IYYALISGLCQVRRDHDAIRV-VEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTD 571
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M G P TY+TL+ + +F V + +++ + G P++ TY A+I
Sbjct: 572 MEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG--------LDPTVTTYGAVI 623
Query: 284 HGLCFFQRPDEALEILRGMP-EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
C DEAL++ + M ++P+ V Y+ +I+ F ++ +A LK EM K
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMK 681
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 208/514 (40%), Gaps = 90/514 (17%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAAC---EAEKNHNLSIPYVRIVEL 115
N V+ L G + +A VL EM + V I+A E K L+ +I+ L
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEE--KIIAL 246
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
+ +SPN I C R A IL + + A ++ ++S +
Sbjct: 247 ISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGR 306
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
N ++ + ++ ++M + I PDV G+LI LC RR+ EA ++F++M + G
Sbjct: 307 NMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVI 366
Query: 236 ------YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
++TL++ C G + +E++ + L +P+ VTYN LI G C
Sbjct: 367 KADSIHFNTLIDGLCKVGRLKEA----EELLVRMKLE---ERCAPNAVTYNCLIDGYCRA 419
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
+ + A E++ M E + P+ V+ + ++ G R L A ++M+++
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEG-------- 471
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL---KLRYQAQYLPDSVSYCLLLNGL--- 403
VK N T+ +L++ C+ E A+ + +A PD+ Y L++GL
Sbjct: 472 -----VK--GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 404 ----------HKKATSRFAKRLLLFYI-------------VAHCLT-------IPSYIIY 433
K F+ LL + + V LT P I Y
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 434 DILIEKCA-NNEFKSVVELVKGFRMRGL-------------------VNEAARA-RDTML 472
+ LI + +F+SV +++ R GL ++EA + +D L
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
H P +YN+LI GN +A + +EM
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEM 678
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 109/256 (42%), Gaps = 47/256 (18%)
Query: 55 LVSFNAVIKRLCGEGRIREA----ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++ +I C + +A E +L+ PD Y LIS C+ ++H+ +
Sbjct: 476 VVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD----AI 531
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
R+VE + S + Y +I LFCD+N E+ +L M ++G P + +Y+ +I
Sbjct: 532 RVVEKLKEGG---FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI 588
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG-M 229
S F K+K+ M +M + G+ P V YG +I C L EA LF++M L +
Sbjct: 589 SFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKV 648
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQ--------------------------------- 256
+P Y+ L+ A+ G F + L+
Sbjct: 649 NPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
Query: 257 --DEVIQKGFLPYYVT 270
DE++++ P +T
Sbjct: 709 LMDEMVEQSCEPNQIT 724
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 12/203 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
L+++N +I C + + +L +M PD +TYNTLIS + + +
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKD-------FE 598
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMA-EKGLSPHADSYSRI 169
+ + QM L P TTY +I +C ++EA+ + + M ++P+ Y+ +
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I+ F K G+AL +K EM K + P+V Y L + L + + L EM+ +
Sbjct: 659 INAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSC 718
Query: 230 SPGGRTYDTLVEAYCLKGEFSKV 252
P T + L+E E K+
Sbjct: 719 EPNQITMEILMERLSGSDELVKL 741
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 177/398 (44%), Gaps = 56/398 (14%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACE------------- 98
V++N VI LC G EA L EM PD V+YNTLI C+
Sbjct: 162 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 99 -AEKN---HNLSIPYV----RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGI 150
+E N H + + I E Y M + P+ T+ +I C +V E +
Sbjct: 222 ISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 151 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH 210
LR M E + P+ +Y+ ++ K AL + +M+ +GI D+ Y +L+ L
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 211 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 270
L EA F+ +L P TY LV+ C G+ S + ++++K
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK-------- 393
Query: 271 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 330
S P++VTY+++I+G +EA+ +LR M + + P+ +Y VI G + + A
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 331 FELKLEM---DQKETCWPLDQDTN-----------ESLVKDLSNHD------TFSSLVND 370
EL EM +E + LD N + LVKD+ + ++SL++
Sbjct: 454 IELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDV 513
Query: 371 Y--CAEDKAEMALKLRYQAQYLP-DSVSYCLLLNGLHK 405
+ +++A +A Q + +P D VSY +L++G+ K
Sbjct: 514 FFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLK 551
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/483 (22%), Positives = 204/483 (42%), Gaps = 65/483 (13%)
Query: 63 KRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR 122
+RL G R A + PD +N+LI + N N + + ++ +Y +M
Sbjct: 72 ERLYGAARTLSAMCTFGVV--PDSRLWNSLIH-----QFNVN-GLVHDQVSLIYSKMIAC 123
Query: 123 ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA 182
+SP+ +I FC R+ A+ +LR + +S +Y+ +IS C++ +A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEHGLADEA 180
Query: 183 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 242
+ EM+ GI PD +Y LI C + A+ L E+ + T+ L+ +
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI----THTILLSS 236
Query: 243 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 302
Y ++L I++ + ++ F P +VT++++I+ LC + E +LR M
Sbjct: 237 Y---------YNLH--AIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREM 285
Query: 303 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD 362
EM + P+ V+Y+ ++ + R A L +M + P+D L+ L
Sbjct: 286 EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGI--PVDLVVYTVLMDGL---- 339
Query: 363 TFSSLVNDYCAED--KAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYI 420
+ A D +AE K+ + +P+ V+Y L++GL K A+ +I
Sbjct: 340 --------FKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAE-----FI 386
Query: 421 VAHCL---TIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 477
+ L IP+ + Y ++ G+ +G++ EA M +N
Sbjct: 387 ITQMLEKSVIPNVVTYS---------------SMINGYVKKGMLEEAVSLLRKMEDQNVV 431
Query: 478 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWV 537
P G Y +I G A ++ KEM G + + + AL+ L R E+ +
Sbjct: 432 PNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGL 491
Query: 538 IRN 540
+++
Sbjct: 492 VKD 494
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/468 (21%), Positives = 203/468 (43%), Gaps = 61/468 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+++++I +G + EA ++L++M D P+ TY T+I +A K
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE------- 451
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+EL +M + + N ++ R++E G+++ M KG++ +Y+ +I
Sbjct: 452 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
F K + AL EM ++G+ DV +Y +LI + ++ A ++ M +G+
Sbjct: 512 DVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIE 570
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T++ ++ + +G+ + L D++ G PSL++ N ++ LC
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGI--------KPSLMSCNIVVGMLCENG 622
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
+ +EA+ IL M M + P+ +Y + + + F+ T
Sbjct: 623 KMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFK-----------------T 665
Query: 351 NESLVK---DLSNHDTFSSLVNDYCA---EDKAEMALKLRYQAQYLPDSVSYCLLLNGLH 404
+E+L+ LS +++L+ C KA M + ++PD+V++ L++G
Sbjct: 666 HETLLSYGIKLSRQ-VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG-- 722
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
+++ +H S Y +++E + + +++G GL+ E
Sbjct: 723 -------------YFVGSHVRKALS--TYSVMMEAGISPNVATYNTIIRGLSDAGLIKEV 767
Query: 465 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
+ M R RP+ YN LI GN+ + +Y EM+ G V
Sbjct: 768 DKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV 815
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/482 (20%), Positives = 205/482 (42%), Gaps = 54/482 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V+F+++I RLC G++ E +L+EM + P+ VTY TL+ + +A Y
Sbjct: 259 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKAN-------IYR 311
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ LY QM VR + + Y ++ + EA +++ E P+ +Y+ ++
Sbjct: 312 HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALV 371
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
CK ++ A + +ML+K + P+V Y +I + L EA L ++M + +
Sbjct: 372 DGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVV 431
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P G TY T+++ G+ L E+ + + +AL++ L
Sbjct: 432 PNGFTYGTVIDGLFKAGKEEMAIELSKEM--------RLIGVEENNYILDALVNHLKRIG 483
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
R E +++ M + D+++Y+++I F + + A EM ++ W
Sbjct: 484 RIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPW------ 537
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR 410
D+ +++ S + + + A+ A K + PD ++ +++N K+ S
Sbjct: 538 ------DVVSYNVLISGMLKF-GKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSE 590
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRM----------RG 459
L L+ + C PS + +I++ C N + + + ++ + R
Sbjct: 591 GI--LKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRI 648
Query: 460 LVNEAARAR---------DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
++ +++ + +T+L + VYN LI C G KA + +M G
Sbjct: 649 FLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARG 708
Query: 511 FV 512
F+
Sbjct: 709 FI 710
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 213/495 (43%), Gaps = 56/495 (11%)
Query: 55 LVSFNAVIKRLCGEGRIREAET----VLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYV 110
LV + ++ L G +REAE +L++ P+ VTY L+ C+A +LS
Sbjct: 329 LVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKA---GDLSSAEF 385
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
I QM + + PN TY MI + + +EEAV +LR M ++ + P+ +Y +I
Sbjct: 386 IIT----QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVI 441
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
K + A+E+ EM G+ + + L+ L R+ E + L ++M+ +G++
Sbjct: 442 DGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
Y +L++ + G+ +E+ ++G +P+ V V+YN LI G+ F
Sbjct: 502 LDQINYTSLIDVFFKGGDEEAALAWAEEMQERG-MPWDV-------VSYNVLISGMLKFG 553
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
+ A +GM E ++PD +++ +++ R+ + +L D+ ++C
Sbjct: 554 KVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL---WDKMKSC-----GI 604
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLN--GLHK 405
SL+ + + +V C K E A+ + Q + P+ +Y + L+ HK
Sbjct: 605 KPSLM-------SCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
Query: 406 KATSRF-AKRLLLFYIVAHCLTIPSYIIYDI----LIEKCA----NNEFKSVV------- 449
+A + F LL Y + + + +I + + +K A + E + +
Sbjct: 658 RADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFN 717
Query: 450 ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHY 509
L+ G+ + V +A M+ P A YN +I G + + EM
Sbjct: 718 SLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSR 777
Query: 510 GFVCHMFSVLALIKA 524
G F+ ALI
Sbjct: 778 GMRPDDFTYNALISG 792
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 153/358 (42%), Gaps = 32/358 (8%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+VS+N +I + G++ A+ + M +PD T+N ++++ + +
Sbjct: 539 VVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEG------ 591
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
I++L+ +M + P+ + ++ + C+ ++EEA+ IL M + P+ +Y +
Sbjct: 592 -ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFL 650
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
K+K + +L GI Y LI LC +A + +M RG
Sbjct: 651 DTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFI 710
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T+++L+ Y + K +++ G SP++ TYN +I GL
Sbjct: 711 PDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG--------ISPNVATYNTIIRGLSDAG 762
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
E + L M + PD+ +Y+A+ISG +I ++ + + EM
Sbjct: 763 LIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM------------I 810
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKAT 408
+ LV S ++ S + +A LK + P++ +YC +++GL K T
Sbjct: 811 ADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCT 868
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 121/536 (22%), Positives = 221/536 (41%), Gaps = 95/536 (17%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEA----------- 99
+V+F +I C G + A + + M +PD + Y+TLI +A
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 100 ---EKNHNLSIP--------YVRIVEL------YHQMCVRELSPNETTYRCMIRLFCDRN 142
K L + YV+ +L Y +M + +SPN TY +I+ C
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
R+ EA G+ + ++G+ P +YS +I FCK + + +M+ G PDV YG
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS---KVFHLQDEV 259
+L+ L Q +L A +ML + + +++L++ +C F KVF L
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG-- 523
Query: 260 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
+ P + T+ ++ R +EAL + M +M L+PD ++Y +I
Sbjct: 524 ---------IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 320 GFRRIRELRKAFELKL-EMDQKE-----------------TCWPLDQDTN--ESLVKDLS 359
F + ++ L+L ++ Q+ C ++ + +L++
Sbjct: 575 AF--CKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 360 NHD--TFSSLVNDYCA---EDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKR 414
D T+++++ YC+ D+AE +L + P++V+ +L++ L K A R
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 692
Query: 415 LLLFYIVAHCLTIPSYIIYDILI--------------------EKCANNEFKSVVELVKG 454
+F I+A + P+ + Y L+ EK + S ++ G
Sbjct: 693 --MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 455 FRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
RG V+EA + P+ Y +LI +C G + +A +Y+ ML G
Sbjct: 751 LCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 806
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 178/404 (44%), Gaps = 55/404 (13%)
Query: 21 GFAAGKATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQE 80
GFA + + G PP+V+I G + + ++ +R + +L +
Sbjct: 445 GFALYEDMIKMGY--PPDVVIYGVLVDGLSKQGLMLH------------AMRFSVKMLGQ 490
Query: 81 MTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCD 140
+ V +N+LI C + + ++++ M + + P+ T+ ++R+
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNR-------FDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 141 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 200
R+EEA+ + M + GL P A +Y +I FCK+ + L++ M I D+
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAV 603
Query: 201 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC-LK--GEFSKVFHLQD 257
++I LL R+ +A F ++ M P TY+T++ YC L+ E ++F L
Sbjct: 604 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 663
Query: 258 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 317
VT F P+ VT LIH LC D A+ + M E P+ V+Y +
Sbjct: 664 -----------VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 318 ISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKA 377
+ F + ++ +F+L EM +K + S+V ++S +++ C +
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEK--------GISPSIV-------SYSIIIDGLCKRGRV 757
Query: 378 EMALKLRYQ---AQYLPDSVSYCLLLNGLHKKATSRFAKRLLLF 418
+ A + +Q A+ LPD V+Y +L+ G K R + LL+
Sbjct: 758 DEATNIFHQAIDAKLLPDVVAYAILIRGYCK--VGRLVEAALLY 799
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 141/317 (44%), Gaps = 28/317 (8%)
Query: 125 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 184
+PN T+ +I FC R ++ A + ++M ++G+ P +YS +I + K +G +
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 185 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 244
+ + L KG+ DV + I + L A +++ ML +G+SP TY L++ C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 245 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
G + F + +++++G PS+VTY++LI G C + M +
Sbjct: 403 QDGRIYEAFGMYGQILKRG--------MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 305 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTF 364
M PD V Y ++ G + + A ++M L Q ++V F
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM--------LGQSIRLNVV-------VF 499
Query: 365 SSLVNDYCAEDKAEMALKL-RYQAQY--LPDSVSYCLLLNGLHKKATSRFAKRLLLFYIV 421
+SL++ +C ++ + ALK+ R Y PD ++ ++ R + L LF+ +
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR--VSIMEGRLEEALFLFFRM 557
Query: 422 AHCLTIPSYIIYDILIE 438
P + Y LI+
Sbjct: 558 FKMGLEPDALAYCTLID 574
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
N VI L RI +A + + PD VTYNT+I C + RI E
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE----RIFE 660
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
L V PN T +I + C N ++ A+ + +MAEKG P+A +Y ++ F
Sbjct: 661 LLK---VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 717
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K+ ++ + ++ EM +KGI P + +Y ++I LC + R+ EA ++F + + + P
Sbjct: 718 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 777
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
Y L+ YC G + L + +++ G P
Sbjct: 778 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 144/346 (41%), Gaps = 53/346 (15%)
Query: 174 CKNKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
C+ + KALE+ V G+ P Y +L L+ R L A D F ++ G+ P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA-DHFDKLCRGGIEPS 215
Query: 233 G-RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
G + +++A KGE +K V+++G F +V+ N ++ GL Q
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERG--------FRVGIVSCNKVLKGLSVDQ- 266
Query: 292 PDEALEILRGMPEMLLD----PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
+E+ + ++LD P+ V++ +I+GF + E+ +AF+L M+Q+
Sbjct: 267 ----IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR------- 315
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK-- 405
+ DL +S+L++ Y M KL QA LHK
Sbjct: 316 -----GIEPDLI---AYSTLIDGYFKAGMLGMGHKLFSQA---------------LHKGV 352
Query: 406 KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 465
K + Y+ + L S + +L + + N + L+KG G + EA
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI-LIKGLCQDGRIYEAF 411
Query: 466 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
+L R P Y+ LI C GN+ + +Y++M+ G+
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 56 VSFNAVIKRLCG----EGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+ +I LC +G IR + ++ + P+ VTY L+ + S+
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK-------SVDIEG 724
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+L+ +M + +SP+ +Y +I C R RV+EA I + L P +Y+ +I
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPD 197
+CK + +A + ML G+ PD
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 181/429 (42%), Gaps = 44/429 (10%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+E++ +M + + ++ C R VE++ +++ + KG+ P A +Y+ II+
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ K ++ + M G+ + Y LL++L ++ +A LF EM RG+
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
Y +L+ C KG + F L DE+ +KG SPS TY ALI G+C
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKG--------LSPSSYTYGALIDGVCKVGEM 380
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
A ++ M ++ +V ++ +I G+ R + +A + M+QK
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK------------ 428
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
D+ +T +S N D+A+ L + +VSY L++ K+ A
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 413 KRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 472
KR LF ++ P+ I Y+++I + +G + EA + R M
Sbjct: 489 KR--LFVEMSSKGVQPNAITYNVMI---------------YAYCKQGKIKEARKLRANME 531
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM----LHYGFVCHMFSVLALIKALYCD 528
P+ Y LI CI NV +A ++ EM L V + + L KA D
Sbjct: 532 ANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSD 591
Query: 529 ER---YNEM 534
E Y+EM
Sbjct: 592 EAFGLYDEM 600
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 178/420 (42%), Gaps = 45/420 (10%)
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+L + V+ + P TY +I + + G+L++M + G+ + +Y+ ++
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELS 304
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
KN +M A ++ EM ++GI DVH Y LI C + + A LF E+ +G+SP
Sbjct: 305 VKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSS 364
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
TY L++ C GE L +E+ KG + + V +N LI G C D
Sbjct: 365 YTYGALIDGVCKVGEMGAAEILMNEMQSKG--------VNITQVVFNTLIDGYCRKGMVD 416
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
EA I M + D + + + S F R++ +A + M ++ S
Sbjct: 417 EASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM--------MEGGVKLS 468
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSR 410
V ++++L++ YC E E A +L + P++++Y +++ K+ +
Sbjct: 469 TV-------SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEKC-ANNEFKSVVELVKGFRMRGLVNEAARARD 469
A++L + A+ + SY ++ +C A+N V+EA R
Sbjct: 522 EARKLRA-NMEANGMDPDSYTYTSLIHGECIADN-----------------VDEAMRLFS 563
Query: 470 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDE 529
M + Y ++I G +A+ +Y EM G+ ALI +++ E
Sbjct: 564 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHSPE 623
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 157/353 (44%), Gaps = 37/353 (10%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
S V++ LC G + +++ +++E + P+ TYNT+I+A + + +
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQR-------DFSGV 278
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ M + N+ TY ++ L ++ +A + M E+G+ Y+ +IS
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
C+ M +A + E+ +KG+ P + YG LI +C + A L EM +G++
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
++TL++ YC KG + + D + QKG F + T N + +R
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKG--------FQADVFTCNTIASCFNRLKRY 450
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
DEA + L M E + VSY+ +I + + + +A L +EM K P
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSK-GVQP------- 502
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNG 402
N T++ ++ YC + K + A KLR + PDS +Y L++G
Sbjct: 503 -------NAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVL----QEMTDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
V FN +I C +G + EA + Q+ D T NT+ A+C N Y
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI--ASC-----FNRLKRYDE 452
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ +M + + +Y +I ++C VEEA + M+ KG+ P+A +Y+ +I
Sbjct: 453 AKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIY 512
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+CK ++ +A +++ M G+ PD + Y LI C + EA LF EM L+G+
Sbjct: 513 AYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQ 572
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
TY ++ G+ + F L DE+ +KG+
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
+++N +I C +G+I+EA + M DPD TY +LI C A+
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD-------E 557
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ L+ +M ++ L N TY MI + +EA G+ M KG + Y+ +I
Sbjct: 558 AMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 171/379 (45%), Gaps = 40/379 (10%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACE---AEKNHNLSI 107
L++F ++I LC +G I++A +L+EM P+ T+ LI C+ EK L +
Sbjct: 287 LINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFL 346
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
VR + Y PN TY MI +C +++ A + M E+GL P+ ++Y+
Sbjct: 347 KLVR-SDTYK--------PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+I+ CK G+A E+ M D+G P+++ Y I LC + R EA +L +
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSC 457
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G+ G TY L++ C + + ++ F T F + N LI C
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAF--------FCRMNKTGFEADMRLNNILIAAFC 509
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
++ E+ + + + + L P + +Y+++IS + + ++ A + M ++ C P D
Sbjct: 510 RQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM-KRHGCVP-D 567
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEM----------ALKLRYQAQYLPDSVSYC 397
T SL+ L S+V++ C +A + + L Y+ DS +
Sbjct: 568 SFTYGSLISGLCKK----SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623
Query: 398 LLLNGLHKKATSRFAKRLL 416
+LL L KK R + L+
Sbjct: 624 ILLEPLDKKLWIRTVRTLV 642
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 174/403 (43%), Gaps = 45/403 (11%)
Query: 132 RCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 191
RCM+R F + R+ EAVG++ M +GL+P + + + ++ + + A + EM
Sbjct: 151 RCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSV 210
Query: 192 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 251
+G+ PD +Y L++ ++ EA M+ RG P T ++ A C G ++
Sbjct: 211 RGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNR 270
Query: 252 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 311
++I G F P+L+ + +LI GLC +A E+L M P+
Sbjct: 271 AIWYFRKMIDLG--------FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNV 322
Query: 312 VSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDY 371
+++A+I G + KAF L L++ + +T P N T++S++ Y
Sbjct: 323 YTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP--------------NVHTYTSMIGGY 368
Query: 372 CAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIP 428
C EDK AEM + P+ +Y L+NG H KA S F + L ++ +P
Sbjct: 369 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING-HCKAGS-FGRAYELMNLMGDEGFMP 426
Query: 429 SYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 487
+ Y+ I+ C + EL+ GL +G Y +LI
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL----------------EADGVTYTILI 470
Query: 488 FDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDER 530
+ C ++++A + M GF M LI A +C ++
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA-FCRQK 512
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 168/417 (40%), Gaps = 82/417 (19%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
++ N V++ G I AE V EM+ PD +Y ++ K
Sbjct: 183 ITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTG 242
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+++ R P+ T ++ C+ V A+ R M + G P+ +++ +I
Sbjct: 243 MIQ-------RGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLID 295
Query: 172 RFCKNKEMGKALEMKVEMLDKG--------------------------IF---------- 195
CK + +A EM EM+ G +F
Sbjct: 296 GLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYK 355
Query: 196 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 255
P+VH Y +I C + +L A LF M +G+ P TY TL+ +C G F + + L
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 256 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 315
+ + +GF+ P++ TYNA I LC R EA E+L L+ D V+Y+
Sbjct: 416 MNLMGDEGFM--------PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYT 467
Query: 316 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD------------------ 357
+I + ++ +A M++ T + D N L+
Sbjct: 468 ILIQEQCKQNDINQALAFFCRMNK--TGFEADMRLNNILIAAFCRQKKMKESERLFQLVV 525
Query: 358 ----LSNHDTFSSLVNDYCAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLHKKA 407
+ +T++S+++ YC E ++ALK + + +PDS +Y L++GL KK+
Sbjct: 526 SLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 582
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/437 (20%), Positives = 186/437 (42%), Gaps = 49/437 (11%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
V + M + L+P+ T C++ + + +E A + M+ +G+ P + SY ++
Sbjct: 167 VGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIG 226
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
++ ++ +A M+ +G PD L++ LC + A F++M+ G P
Sbjct: 227 CFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPN 286
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
+ +L++ C KG + F + +E+++ G + P++ T+ ALI GLC
Sbjct: 287 LINFTSLIDGLCKKGSIKQAFEMLEEMVRNG--------WKPNVYTHTALIDGLCKRGWT 338
Query: 293 DEALEI-LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
++A + L+ + P+ +Y+++I G+ + +L +A E+ +++ +P
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA-EMLFSRMKEQGLFP------ 391
Query: 352 ESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKAT 408
N +T+++L+N +C +A + L ++P+ +Y ++ L KK
Sbjct: 392 --------NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKK-- 441
Query: 409 SRFAKRLLLFYIVAHCLTIPSYIIYDILI-EKCANNEFKSVVE----------------- 450
SR + L C + Y ILI E+C N+ +
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501
Query: 451 --LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLH 508
L+ F + + E+ R ++ P Y +I +C G++ A + M
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 509 YGFVCHMFSVLALIKAL 525
+G V F+ +LI L
Sbjct: 562 HGCVPDSFTYGSLISGL 578
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
N +I C + +++E+E + Q + P TY ++IS C+ E + +L++ Y
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCK-EGDIDLALKY----- 555
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
+H M P+ TY +I C ++ V+EA + M ++GLSP + + +C
Sbjct: 556 -FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 614
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K + A+ + +E LDK ++ + L++ LC ++++ A FQ++L + S
Sbjct: 615 KRNDSANAMIL-LEPLDKKLW--IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRV 671
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEV 259
T A G+ + V L + +
Sbjct: 672 TLAAFTTACSESGKNNLVTDLTERI 696
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 189/426 (44%), Gaps = 50/426 (11%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
FN++I+ G +E+ + Q M P +T+N+L+S + + + +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
Y ++P+ T+ +I FC + V+EA I + M +P +Y+ II
Sbjct: 201 RTYG------VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGL 254
Query: 174 CKNKEMGKALEMKVEMLDKG--IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
C+ ++ A + ML K + P+V +Y L++ C ++ + EA +F +ML RG+ P
Sbjct: 255 CRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKP 314
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY+TL++ + ++ +++ G + T+F+P T+N LI C
Sbjct: 315 NAVTYNTLIKGLSEAHRYDEI----KDILIGGNDAF--TTFAPDACTFNILIKAHCDAGH 368
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET------CWP 345
D A+++ + M M L PD SYS +I E +A L E+ +KE C P
Sbjct: 369 LDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKP 428
Query: 346 LDQDTN--------------------ESLVKDLSNHDTFSSLVNDYCAEDKAEMA---LK 382
L N + + + + + ++ +L+ +C E K + A L
Sbjct: 429 LAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLV 488
Query: 383 LRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSY---IIYDILIEK 439
L + +++PD +Y LL++GL K + A L + + L + + ++ ++ K
Sbjct: 489 LMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRK 548
Query: 440 CANNEF 445
AN F
Sbjct: 549 FANESF 554
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 161/360 (44%), Gaps = 33/360 (9%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEK---NHNLSIPY 109
+FN +I C + EA + ++M +PD VTYNT+I C A K HN+
Sbjct: 211 TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGM 270
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
++ H PN +Y ++R +C + ++EAV + M +GL P+A +Y+ +
Sbjct: 271 LKKATDVH--------PNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTL 322
Query: 170 ISRFCKNKEMGKALEMKVEMLD--KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
I + + ++ + D PD + +LI+ C L A +FQEML
Sbjct: 323 IKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNM 382
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
+ P +Y L+ C++ EF + L +E+ +K L P YN + LC
Sbjct: 383 KLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL-LGKDECKPLAAAYNPMFEYLC 441
Query: 288 FFQRPDEALEILRG-MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 346
+ +A ++ R M + DP SY +I+G R + + A+EL + M ++E +
Sbjct: 442 ANGKTKQAEKVFRQLMKRGVQDPP--SYKTLITGHCREGKFKPAYELLVLMLRRE--FVP 497
Query: 347 DQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKK 406
D +T E L+ D + A D + L+ + YLP + ++ +L L K+
Sbjct: 498 DLETYELLI------DGLLKIGEALLAHDTLQRMLR----SSYLPVATTFHSVLAELAKR 547
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 186/435 (42%), Gaps = 49/435 (11%)
Query: 101 KNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS 160
+N N++ ++ +E CV+ + + +IR + + +E+V + + M + G+S
Sbjct: 114 RNLNVARNFLFSIERRSNGCVK---LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGIS 170
Query: 161 PHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARD 219
P +++ ++S K G A ++ EM G+ PD + + LI C + EA
Sbjct: 171 PSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFR 230
Query: 220 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 279
+F++M L +P TY+T+++ C G+ ++ +++K T P++V+Y
Sbjct: 231 IFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA------TDVHPNVVSY 284
Query: 280 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 339
L+ G C Q DEA+ + M L P+ V+Y+ +I G + E + E+K
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKG---LSEAHRYDEIK----- 336
Query: 340 KETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSY 396
+ N++ + TF+ L+ +C + A+K+ + + PDS SY
Sbjct: 337 -----DILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 397 CLLLNGL-----HKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVE 450
+L+ L +A + F + ++ P Y+ + E CAN + K +
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 451 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
+ + RG+ + + Y LI HC G AY++ ML
Sbjct: 452 VFRQLMKRGVQDPPS-----------------YKTLITGHCREGKFKPAYELLVLMLRRE 494
Query: 511 FVCHMFSVLALIKAL 525
FV + + LI L
Sbjct: 495 FVPDLETYELLIDGL 509
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 31/287 (10%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TD--PDCVTYNTLISAACEAEKNHNLSIP 108
+V++N +I LC G+++ A VL M TD P+ V+Y TL+ C ++
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQE------- 296
Query: 109 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGIL--RLMAEKGLSPHADSY 166
V ++H M R L PN TY +I+ + +R +E IL A +P A ++
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 356
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
+ +I C + A+++ EML+ + PD +Y +LI+ LC + A LF E+
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 227 RGM-------SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 279
+ + P Y+ + E C G+ + + +++++G PS Y
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG------VQDPPS---Y 467
Query: 280 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 326
LI G C + A E+L M PD +Y +I G +I E
Sbjct: 468 KTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGE 514
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 15/203 (7%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN +IK C G + A V QEM + PD +Y+ LI C + + +
Sbjct: 355 TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNEL 414
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
E + E P Y M C + ++A + R + ++G+ SY +I+
Sbjct: 415 FEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQD-PPSYKTLITG 473
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
C+ + A E+ V ML + PD+ Y LLI L L A D Q ML P
Sbjct: 474 HCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPV 533
Query: 233 GRTYDTLV----------EAYCL 245
T+ +++ E++CL
Sbjct: 534 ATTFHSVLAELAKRKFANESFCL 556
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 98/252 (38%), Gaps = 42/252 (16%)
Query: 47 GKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD---PDCVTYNTLISAACEAEKNH 103
GK + ++N + + LC G+ ++AE V +++ D +Y TLI+ C K
Sbjct: 422 GKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGK-- 479
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
+ EL M RE P+ TY +I A L+ M P A
Sbjct: 480 -----FKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVA 534
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV------------------------- 198
++ +++ K K ++ + ML+K I ++
Sbjct: 535 TTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRL 594
Query: 199 -HAYGLLIQL------LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 251
+ G L+++ LC R+LL+A L L + T +T++E C S+
Sbjct: 595 LYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSE 654
Query: 252 VFHLQDEVIQKG 263
F L +E+++ G
Sbjct: 655 AFSLYNELVELG 666
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 20/290 (6%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+N ++ G +AE +L EM + PD TYNTLIS C+ + +
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM-------HFEAL 258
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+ +M ++PN TY I F R+ EA + R + + + H +Y+ +I +
Sbjct: 259 SVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLIDGY 317
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
C+ ++ +AL ++ M +G P V Y +++ LC R+ EA L EM + + P
Sbjct: 318 CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN 377
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
T +TL+ AYC + ++ ++I+ G + +Y ALIHG C +
Sbjct: 378 ITCNTLINAYCKIEDMVSAVKVKKKMIESGL--------KLDMYSYKALIHGFCKVLELE 429
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
A E L M E P +YS ++ GF + + +L E +++ C
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC 479
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 138/282 (48%), Gaps = 18/282 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD---PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+V++N+ I EGR+REA + +E+ D + VTY TLI C N +R
Sbjct: 273 IVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRM----NDIDEALR 328
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ E+ M R SP TY ++R C+ R+ EA +L M+ K + P + + +I+
Sbjct: 329 LREV---MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+CK ++M A+++K +M++ G+ D+++Y LI C L A++ M+ +G SP
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
G TY LV+ + + + ++ L +E ++G + Y LI +C ++
Sbjct: 446 GYATYSWLVDGFYNQNKQDEITKLLEEFEKRG--------LCADVALYRGLIRRICKLEQ 497
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
D A + M + L D V ++ + + R ++ +A L
Sbjct: 498 VDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%), Gaps = 18/219 (8%)
Query: 43 GFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACE 98
GF+ G +V++N+++++LC +GRIREA +L EM+ +PD +T NTLI+A C+
Sbjct: 337 GFSPG-------VVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Query: 99 AEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG 158
E V V++ +M L + +Y+ +I FC +E A L M EKG
Sbjct: 390 IE-------DMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG 442
Query: 159 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 218
SP +YS ++ F + + ++ E +G+ DV Y LI+ +C ++ A+
Sbjct: 443 FSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAK 502
Query: 219 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 257
LF+ M +G+ + T+ AY G+ ++ L D
Sbjct: 503 VLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFD 541
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 112/226 (49%), Gaps = 9/226 (3%)
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ +++ +M + N Y ++ E+A +L M EKG+ P +Y+ +IS
Sbjct: 187 VWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLIS 246
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+CK +AL ++ M G+ P++ Y I + R+ EA LF+E + ++
Sbjct: 247 VYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTA 305
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY TL++ YC + + L++ + +G FSP +VTYN+++ LC R
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRG--------FSPGVVTYNSILRKLCEDGR 357
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
EA +L M ++PD ++ + +I+ + +I ++ A ++K +M
Sbjct: 358 IREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM 403
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 169/393 (43%), Gaps = 51/393 (12%)
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ +++ + + GL PH + + +++ K + ++ +M+ G+ ++H Y +
Sbjct: 149 INDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNV 208
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L+ +A L EM +G+ P TY+TL+ YC K + +QD + + G
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+P++VTYN+ IHG R EA + R + + + + V+Y+ +I G+ R
Sbjct: 269 V--------APNIVTYNSFIHGFSREGRMREATRLFREIKDDV-TANHVTYTTLIDGYCR 319
Query: 324 IRELRKAFELKLEMDQK--------------ETCWPLDQDTNESLVKDLS------NHDT 363
+ ++ +A L+ M+ + + C L+ ++S ++ T
Sbjct: 320 MNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNIT 379
Query: 364 FSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYI 420
++L+N YC + A+K++ ++ D SY L++G K AK L F +
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEEL-FSM 438
Query: 421 VAHCLTIPSYIIYDILIEKCAN-NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 479
+ + P Y Y L++ N N+ + +L++ F RGL + A
Sbjct: 439 IEKGFS-PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVA-------------- 483
Query: 480 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
+Y LI C V A +++ M G V
Sbjct: 484 --LYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 161/364 (44%), Gaps = 33/364 (9%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISA-ACEAEKNHNLSIPYVRI-VEL 115
F+++ K + R A +M D Y L + +C A + L V I +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKD-----YGFLPTVESCNAYMSSLLGQGRVDIALRF 225
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
Y +M ++SPN T ++ +C ++++ + +L+ M G SY+ +I+ C+
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
+ AL++K M G+ P+V + LI C +L EA +F EM ++P T
Sbjct: 286 KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVT 345
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 295
Y+TL+ Y +G+ F ++++ G ++TYNALI GLC + +A
Sbjct: 346 YNTLINGYSQQGDHEMAFRFYEDMVCNG--------IQRDILTYNALIFGLCKQAKTRKA 397
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
+ ++ + + L P+ ++SA+I G + + FEL M + C P
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM-IRSGCHP---------- 446
Query: 356 KDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
N TF+ LV+ +C D A L+ + DS + + NGL + +
Sbjct: 447 ----NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLV 502
Query: 413 KRLL 416
K+LL
Sbjct: 503 KKLL 506
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 134/305 (43%), Gaps = 25/305 (8%)
Query: 50 TTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNL 105
T E C NA + L G+GR+ A +EM P+ T N ++S C + K
Sbjct: 202 TVESC----NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK---- 253
Query: 106 SIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
+ +EL M + +Y +I C++ + A+ + +M + GL P+ +
Sbjct: 254 ---LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVT 310
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
++ +I FC+ ++ +A ++ EM + P+ Y LI Q A +++M+
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
G+ TY+ L+ C + + K E+ ++ + P+ T++ALI G
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV--------PNSSTFSALIMG 422
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
C + D E+ + M P+E +++ ++S F R + A ++ EM ++ P
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI--P 480
Query: 346 LDQDT 350
LD T
Sbjct: 481 LDSRT 485
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 25/292 (8%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM-------TDPDCVTYNTLISAACEAEKNHNLSIPY 109
+ N V+ C G++ + +LQ+M TD V+YNTLI+ CE
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD---VSYNTLIAGHCEKG-------LL 289
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
++L + M L PN T+ +I FC +++EA + M ++P+ +Y+ +
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I+ + + + A +M+ GI D+ Y LI LC Q + +A +E+ +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P T+ L+ C++ + F L +I+ G P+ T+N L+ C
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC--------HPNEQTFNMLVSAFCRN 461
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
+ D A ++LR M + D + V +G + + + +L EM+ K+
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKK 513
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 30 EKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPD 85
EKGL+S + L GK+ + +V+FN +I C +++EA V EM P+
Sbjct: 285 EKGLLS--SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 86 CVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVE 145
VTYNTLI+ + + +H ++ + Y M + + TY +I C + +
Sbjct: 343 TVTYNTLINGYSQ-QGDHEMAFRF------YEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 146 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 205
+A ++ + ++ L P++ ++S +I C K + E+ M+ G P+ + +L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 206 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
C A + +EM+ R + RT + +G+ V L E+ K FL
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 140/336 (41%), Gaps = 29/336 (8%)
Query: 122 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 181
RE + + + F + A M + G P +S + +S +
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
AL EM I P+ + +++ C +L + +L Q+M G +Y+TL+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 301
+C KG S L++ + + G P++VT+N LIHG C + EA ++
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSG--------LQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 302 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNH 361
M + + P+ V+Y+ +I+G+ + + AF +M C + +D
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM----VCNGIQRDI----------- 378
Query: 362 DTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLF 418
T+++L+ C + K A +K + +P+S ++ L+ G + + L
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 419 YIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVK 453
I + C P+ +++L+ C N +F ++++
Sbjct: 439 MIRSGCH--PNEQTFNMLVSAFCRNEDFDGASQVLR 472
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 143/349 (40%), Gaps = 55/349 (15%)
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L + H ++ A D F +M G P + + + + +G E+ +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRR-- 231
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
SP+ T N ++ G C + D+ +E+L+ M + +VSY+ +I+G
Sbjct: 232 ------CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
L A +LK M K P N TF++L++ +C K + A K+
Sbjct: 286 KGLLSSALKLK-NMMGKSGLQP--------------NVVTFNTLIHGFCRAMKLQEASKV 330
Query: 384 RYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYII-YDILIEK 439
+ + + P++V+Y L+NG ++ A R FY C I I+ Y+ LI
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR---FYEDMVCNGIQRDILTYNALIFG 387
Query: 440 -CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 498
C + + + VK LV P + ++ LI C+ N +
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLV----------------PNSSTFSALIMGQCVRKNADR 431
Query: 499 AYDMYKEMLHYGFVCH----MFSVLALIKALYCDERYNEMSWVIRNTLR 543
+++YK M+ G CH F++ L+ A +E ++ S V+R +R
Sbjct: 432 GFELYKSMIRSG--CHPNEQTFNM--LVSAFCRNEDFDGASQVLREMVR 476
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 161/364 (44%), Gaps = 33/364 (9%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISA-ACEAEKNHNLSIPYVRI-VEL 115
F+++ K + R A +M D Y L + +C A + L V I +
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKD-----YGFLPTVESCNAYMSSLLGQGRVDIALRF 225
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
Y +M ++SPN T ++ +C ++++ + +L+ M G SY+ +I+ C+
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
+ AL++K M G+ P+V + LI C +L EA +F EM ++P T
Sbjct: 286 KGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVT 345
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 295
Y+TL+ Y +G+ F ++++ G ++TYNALI GLC + +A
Sbjct: 346 YNTLINGYSQQGDHEMAFRFYEDMVCNG--------IQRDILTYNALIFGLCKQAKTRKA 397
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
+ ++ + + L P+ ++SA+I G + + FEL M + C P
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSM-IRSGCHP---------- 446
Query: 356 KDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
N TF+ LV+ +C D A L+ + DS + + NGL + +
Sbjct: 447 ----NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLV 502
Query: 413 KRLL 416
K+LL
Sbjct: 503 KKLL 506
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 134/305 (43%), Gaps = 25/305 (8%)
Query: 50 TTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNL 105
T E C NA + L G+GR+ A +EM P+ T N ++S C + K
Sbjct: 202 TVESC----NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK---- 253
Query: 106 SIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
+ +EL M + +Y +I C++ + A+ + +M + GL P+ +
Sbjct: 254 ---LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVT 310
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
++ +I FC+ ++ +A ++ EM + P+ Y LI Q A +++M+
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
G+ TY+ L+ C + + K E+ ++ + P+ T++ALI G
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV--------PNSSTFSALIMG 422
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
C + D E+ + M P+E +++ ++S F R + A ++ EM ++ P
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI--P 480
Query: 346 LDQDT 350
LD T
Sbjct: 481 LDSRT 485
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 128/292 (43%), Gaps = 25/292 (8%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM-------TDPDCVTYNTLISAACEAEKNHNLSIPY 109
+ N V+ C G++ + +LQ+M TD V+YNTLI+ CE
Sbjct: 240 TLNMVMSGYCRSGKLDKGIELLQDMERLGFRATD---VSYNTLIAGHCEKG-------LL 289
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
++L + M L PN T+ +I FC +++EA + M ++P+ +Y+ +
Sbjct: 290 SSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTL 349
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I+ + + + A +M+ GI D+ Y LI LC Q + +A +E+ +
Sbjct: 350 INGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P T+ L+ C++ + F L +I+ G P+ T+N L+ C
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC--------HPNEQTFNMLVSAFCRN 461
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
+ D A ++LR M + D + V +G + + + +L EM+ K+
Sbjct: 462 EDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKK 513
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 13/240 (5%)
Query: 30 EKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPD 85
EKGL+S + L GK+ + +V+FN +I C +++EA V EM P+
Sbjct: 285 EKGLLS--SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 86 CVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVE 145
VTYNTLI+ + + +H ++ + Y M + + TY +I C + +
Sbjct: 343 TVTYNTLINGYSQ-QGDHEMAFRF------YEDMVCNGIQRDILTYNALIFGLCKQAKTR 395
Query: 146 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 205
+A ++ + ++ L P++ ++S +I C K + E+ M+ G P+ + +L+
Sbjct: 396 KAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLV 455
Query: 206 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
C A + +EM+ R + RT + +G+ V L E+ K FL
Sbjct: 456 SAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 140/336 (41%), Gaps = 29/336 (8%)
Query: 122 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 181
RE + + + F + A M + G P +S + +S +
Sbjct: 162 RECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDI 221
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
AL EM I P+ + +++ C +L + +L Q+M G +Y+TL+
Sbjct: 222 ALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIA 281
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 301
+C KG S L++ + + G P++VT+N LIHG C + EA ++
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSG--------LQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 302 MPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNH 361
M + + P+ V+Y+ +I+G+ + + AF +M C + +D
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM----VCNGIQRDI----------- 378
Query: 362 DTFSSLVNDYCAEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLF 418
T+++L+ C + K A +K + +P+S ++ L+ G + + L
Sbjct: 379 LTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKS 438
Query: 419 YIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVK 453
I + C P+ +++L+ C N +F ++++
Sbjct: 439 MIRSGCH--PNEQTFNMLVSAFCRNEDFDGASQVLR 472
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 143/349 (40%), Gaps = 55/349 (15%)
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L + H ++ A D F +M G P + + + + +G E+ +
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRR-- 231
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
SP+ T N ++ G C + D+ +E+L+ M + +VSY+ +I+G
Sbjct: 232 ------CKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
L A +LK M K P N TF++L++ +C K + A K+
Sbjct: 286 KGLLSSALKLK-NMMGKSGLQP--------------NVVTFNTLIHGFCRAMKLQEASKV 330
Query: 384 RYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYII-YDILIEK 439
+ + + P++V+Y L+NG ++ A R FY C I I+ Y+ LI
Sbjct: 331 FGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFR---FYEDMVCNGIQRDILTYNALIFG 387
Query: 440 -CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHK 498
C + + + VK LV P + ++ LI C+ N +
Sbjct: 388 LCKQAKTRKAAQFVKELDKENLV----------------PNSSTFSALIMGQCVRKNADR 431
Query: 499 AYDMYKEMLHYGFVCH----MFSVLALIKALYCDERYNEMSWVIRNTLR 543
+++YK M+ G CH F++ L+ A +E ++ S V+R +R
Sbjct: 432 GFELYKSMIRSG--CHPNEQTFNM--LVSAFCRNEDFDGASQVLREMVR 476
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 120/529 (22%), Positives = 209/529 (39%), Gaps = 110/529 (20%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEA----------- 99
+V+F +I C G + A + + M +PD + Y+TLI +A
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 100 ---EKNHNLSIP--------YVRIVEL------YHQMCVRELSPNETTYRCMIRLFCDRN 142
K L + YV+ +L Y +M + +SPN TY +I+ C
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
R+ EA G+ + ++G+ P +YS +I FCK + + +M+ G PDV YG
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 203 LLIQLL-----------------------------------CHQRRLLEARDLFQEMLLR 227
+L+ L C R EA +F+ M +
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G+ P T+ T++ ++ F K H++ + + F S + N +IH L
Sbjct: 526 GIKPDVATFTTVMRVSIMEDAFCK--HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 583
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF---RRIRELRKAFELKLEMDQKETCW 344
R ++A + + E ++PD V+Y+ +I G+ RR+ E + FEL K T
Sbjct: 584 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFEL-----LKVT-- 636
Query: 345 PLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLN 401
P +T T + L++ C + + A+++ + P++V+Y L++
Sbjct: 637 PFGPNTV-----------TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 402 GLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLV 461
K + + LF + PS + Y I+I+ G RG V
Sbjct: 686 WFSKSVDIEGSFK--LFEEMQEKGISPSIVSYSIIID---------------GLCKRGRV 728
Query: 462 NEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
+EA + P+ Y +LI +C G + +A +Y+ ML G
Sbjct: 729 DEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNG 777
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 23/259 (8%)
Query: 125 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 184
+PN T+ +I FC R ++ A + ++M ++G+ P +YS +I + K +G +
Sbjct: 283 APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHK 342
Query: 185 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 244
+ + L KG+ DV + I + L A +++ ML +G+SP TY L++ C
Sbjct: 343 LFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLC 402
Query: 245 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
G + F + +++++G PS+VTY++LI G C + M +
Sbjct: 403 QDGRIYEAFGMYGQILKRG--------MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK 454
Query: 305 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTF 364
M PD V Y ++ G + + A ++M L Q ++V F
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM--------LGQSIRLNVV-------VF 499
Query: 365 SSLVNDYCAEDKAEMALKL 383
+SL++ +C ++ + ALK+
Sbjct: 500 NSLIDGWCRLNRFDEALKV 518
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 101/212 (47%), Gaps = 11/212 (5%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
N VI L RI +A + + PD VTYNT+I C + RI E
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE----RIFE 631
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
L V PN T +I + C N ++ A+ + +MAEKG P+A +Y ++ F
Sbjct: 632 LLK---VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K+ ++ + ++ EM +KGI P + +Y ++I LC + R+ EA ++F + + + P
Sbjct: 689 KSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVV 748
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
Y L+ YC G + L + +++ G P
Sbjct: 749 AYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 46/296 (15%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLI------SAACEAEK--- 101
+V FN++I C R EA V + M PD T+ T++ A C+ K
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTI 555
Query: 102 -------------NHNLSIPYVRI------------VELYHQMCVRELSPNETTYRCMIR 136
+ ++++ V I + ++ + ++ P+ TY MI
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 137 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 196
+C R++EA I L+ P+ + + +I CKN +M A+ M M +KG P
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKP 675
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
+ YG L+ + + LF+EM +G+SP +Y +++ C +G + ++
Sbjct: 676 NAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 312
+ I LP +V Y LI G C R EA + M + PD++
Sbjct: 736 HQAIDAKLLP--------DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 144/346 (41%), Gaps = 53/346 (15%)
Query: 174 CKNKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
C+ + KALE+ V G+ P Y +L L+ R L A D F ++ G+ P
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA-DHFDKLCRGGIEPS 215
Query: 233 G-RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
G + +++A KGE +K V+++G F +V+ N ++ GL Q
Sbjct: 216 GVSAHGFVLDALFCKGEVTKALDFHRLVMERG--------FRVGIVSCNKVLKGLSVDQ- 266
Query: 292 PDEALEILRGMPEMLLD----PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
+E+ + ++LD P+ V++ +I+GF + E+ +AF+L M+Q+
Sbjct: 267 ----IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR------- 315
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK-- 405
+ DL +S+L++ Y M KL QA LHK
Sbjct: 316 -----GIEPDLI---AYSTLIDGYFKAGMLGMGHKLFSQA---------------LHKGV 352
Query: 406 KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 465
K + Y+ + L S + +L + + N + L+KG G + EA
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI-LIKGLCQDGRIYEAF 411
Query: 466 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
+L R P Y+ LI C GN+ + +Y++M+ G+
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 134/294 (45%), Gaps = 27/294 (9%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
N ++K LC + I A VL E+ P+ VTY T++ + R++E
Sbjct: 195 NLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK----RVLE 250
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
+M R P+ TTY ++ +C R EA ++ M + + P+ +Y +I C
Sbjct: 251 ---EMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALC 307
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K K+ G+A M EML++ PD +I LC ++ EA L+++ML P
Sbjct: 308 KEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNA 367
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
TL+ C +G ++ L DE +KG + PSL+TYN LI G+C E
Sbjct: 368 LLSTLIHWLCKEGRVTEARKLFDE-FEKGSI--------PSLLTYNTLIAGMCEKGELTE 418
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRR---IRELRKAFELKLEMDQKETCWP 345
A + M E P+ +Y+ +I G + ++E + E LE+ C+P
Sbjct: 419 AGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG----CFP 468
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 143/321 (44%), Gaps = 35/321 (10%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
++PN T +++ C +N +E A +L + GL P+ +Y+ I+ + +M A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
+ EMLD+G +PD Y +L+ C R EA + +M + P TY ++ A
Sbjct: 247 RVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRAL 306
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
C + + + ++ DE++++ F+P SL +I LC + DEA + R M
Sbjct: 307 CKEKKSGEARNMFDEMLERSFMP------DSSLCC--KVIDALCEDHKVDEACGLWRKML 358
Query: 304 EMLLDPDEVSYSAVISGF---RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
+ PD S +I R+ E RK F+ ++ + SL+
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFD------------EFEKGSIPSLL----- 401
Query: 361 HDTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLL 417
T+++L+ C + + A +L Y+ + P++ +Y +L+ GL K + R+L
Sbjct: 402 --TYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLE 459
Query: 418 FYIVAHCLTIPSYIIYDILIE 438
+ C P+ + IL E
Sbjct: 460 EMLEIGCF--PNKTTFLILFE 478
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 166/408 (40%), Gaps = 58/408 (14%)
Query: 132 RCMIRLFCD--RN-----RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 184
+C LF D RN R E ++ I + + G+ S + +++ +N+
Sbjct: 117 KCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHA 176
Query: 185 M-KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
M K GI P++ LL++ LC + + A + E+ G+ P TY T++ Y
Sbjct: 177 MFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGY 236
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
+G+ + +E++ +G+ P TY L+ G C R EA ++ M
Sbjct: 237 VARGDMESAKRVLEEMLDRGWYP--------DATTYTVLMDGYCKLGRFSEAATVMDDME 288
Query: 304 EMLLDPDEVSYSAVISGF---RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
+ ++P+EV+Y +I ++ E R F+ LE S + D S
Sbjct: 289 KNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLE---------------RSFMPDSS- 332
Query: 361 HDTFSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLL 417
+++ C + K + A L + +PD+ L++ L K+ A++L
Sbjct: 333 --LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFD 390
Query: 418 FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 477
+ +IPS + Y+ LI G +G + EA R D M R +
Sbjct: 391 EFEKG---SIPSLLTYNTLI---------------AGMCEKGELTEAGRLWDDMYERKCK 432
Query: 478 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
P YN+LI GNV + + +EML G + + L L + L
Sbjct: 433 PNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 21/270 (7%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
++ ++ C GR EA TV+ +M +P+ VTY +I A C+ +K+
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR----- 316
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
++ +M R P+ + +I C+ ++V+EA G+ R M + P S +I
Sbjct: 317 --NMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIH 374
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
CK + +A ++ + +KG P + Y LI +C + L EA L+ +M R P
Sbjct: 375 WLCKEGRVTEARKL-FDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKP 433
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY+ L+E G + + +E+++ G P+ T+ L GL +
Sbjct: 434 NAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCF--------PNKTTFLILFEGLQKLGK 485
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGF 321
++A++I+ M M D+ S+ + F
Sbjct: 486 EEDAMKIV-SMAVMNGKVDKESWELFLKKF 514
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 175/407 (42%), Gaps = 72/407 (17%)
Query: 134 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 193
++ C + + +EA +L M +G+ P+ SY+ ++ C+ K M A + +L+KG
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508
Query: 194 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 253
+ P+ + Y +LI A ++ M + G Y T++ C G+ SK
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568
Query: 254 HLQDEVIQ--------------------KGFLPYYVTSF--------SPSLVTYNALIHG 285
L +I+ +G + V ++ SP+++TY +L++G
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
LC R D+ALE+ M + D +Y A+I GF + + A L E+ +E P
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSEL-LEEGLNP 687
Query: 346 LDQDTNESLV---KDLSNH-------------------DTFSSLVNDYCAEDKAEMALKL 383
Q SL+ ++L N T+++L++ + +A +L
Sbjct: 688 -SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 384 RYQAQ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC 440
+ Q +PD + Y +++NGL KK +F K + +F + P+ +IY+ +I
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKG--QFVKVVKMFEEMKKNNVTPNVLIYNAVI--- 801
Query: 441 ANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 487
G G ++EA R D ML + P+GA +++L+
Sbjct: 802 ------------AGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 36/338 (10%)
Query: 72 REAETVLQEMTDPDC----VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPN 127
+ A V+ MT + V Y T+I+ C+ + ++E ++CV +S
Sbjct: 530 QNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE-EKRLCVSCMS-- 586
Query: 128 ETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 187
Y +I F ++ AV M G+SP+ +Y+ +++ CKN M +ALEM+
Sbjct: 587 ---YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 188 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
EM +KG+ D+ AYG LI C + + A LF E+L G++P Y++L+ + G
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 307
L ++++ G L TY LI GL A E+ M + L
Sbjct: 704 NMVAALDLYKKMLKDG--------LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGL 755
Query: 308 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSL 367
PDE+ Y+ +++G + + K ++ EM +K P N ++++
Sbjct: 756 VPDEIIYTVIVNGLSKKGQFVKVVKMFEEM-KKNNVTP--------------NVLIYNAV 800
Query: 368 VNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNG 402
+ + E + A +L + LPD ++ +L++G
Sbjct: 801 IAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 139/562 (24%), Positives = 213/562 (37%), Gaps = 93/562 (16%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
N + L + EA+ + M D D VT L+ A+ EK +E
Sbjct: 202 NRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKP-------AEALE 254
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL-SPHADSYSRIISRF 173
+ + R P+ Y ++ C + A +LR M EK L P ++Y+ +I
Sbjct: 255 VLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILAS 314
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
K M A+ +K EML GI +V A LI C L+ A LF +M G SP
Sbjct: 315 VKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNS 374
Query: 234 RTYDTLVEAYCLKGEFSK----------------VFHLQDEVIQ---KG-----FLPYYV 269
T+ L+E + GE K VFH+ +IQ KG L +
Sbjct: 375 VTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVH-TIIQGWLKGQKHEEALKLFD 433
Query: 270 TSFSPSLVTY---NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 326
SF L N ++ LC + DEA E+L M + P+ VSY+ V+ G R +
Sbjct: 434 ESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKN 493
Query: 327 L---RKAFELKLEMDQKETCWPLD-------QDTNESLVKDLSNHDT----------FSS 366
+ R F LE K + ++ +E ++ NH T + +
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQT 553
Query: 367 LVNDYCAEDKAEMALKLRY----QAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
++N C + A +L + + +SY +++G K+ A + + +
Sbjct: 554 IINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA--VAAYEEMC 611
Query: 423 HCLTIPSYIIYDILIEK-CANNEFKSVVE-------------------LVKGFRMRGLVN 462
P+ I Y L+ C NN +E L+ GF R +
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671
Query: 463 EAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI 522
A+ +L P +YN LI GN+ A D+YK+ML G C + + LI
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Query: 523 KALYCD-------ERYNEMSWV 537
L D E Y EM V
Sbjct: 732 DGLLKDGNLILASELYTEMQAV 753
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 18/282 (6%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+ + ++ LC GR+ EA+ +++E+T+ PD TYN L+ C+ + +L + Y
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK---DLHVVYEF 216
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ E+ V+ P+ ++ +I C+ + EA+ ++ + G P Y+ I+
Sbjct: 217 VDEMRDDFDVK---PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
FC + +A+ + +M ++G+ PD Y LI L R+ EAR + M+ G P
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY +L+ C KGE L +E+ +G +P+ TYN L+HGLC +
Sbjct: 334 DTATYTSLMNGMCRKGESLGALSLLEEMEARG--------CAPNDCTYNTLLHGLCKARL 385
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
D+ +E+ M + + Y+ ++ + ++ +A+E+
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 17/266 (6%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYV-RIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
P T+ L+S AC A + SI V R++ L M L P++ T +R C+
Sbjct: 120 PGRSTFLILLSHACRAPDS---SISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETG 173
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAY 201
RV+EA +++ + EK P +Y+ ++ CK K++ E EM D + PD+ ++
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+LI +C+ + L EA L ++ G P Y+T+++ +C + S+ + ++ +
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
+G P +TYN LI GL R +EA L+ M + +PD +Y+++++G
Sbjct: 294 EG--------VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 322 RRIRELRKAFELKLEMDQKETCWPLD 347
R E A L EM+ + C P D
Sbjct: 346 CRKGESLGALSLLEEMEAR-GCAPND 370
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 11/215 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
LVSF +I +C +REA ++ ++ + PDC YNT++ C K
Sbjct: 230 LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS------- 282
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
V +Y +M + P++ TY +I RVEEA L+ M + G P +Y+ ++
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ C+ E AL + EM +G P+ Y L+ LC R + + +L++ M G+
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
Y TLV + G+ ++ + + D + L
Sbjct: 403 LESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSL 437
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 19/228 (8%)
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 248
M++ G+ PD + ++ LC R+ EA+DL +E+ + P TY+ L++ C +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 249 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 308
V+ DE ++ F P LV++ LI +C + EA+ ++ +
Sbjct: 210 LHVVYEFVDE-MRDDF------DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 309 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLV 368
PD Y+ ++ GF + + +A + +M KE DQ T +L+ LS
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKM--KEEGVEPDQITYNTLIFGLSKAGRV---- 316
Query: 369 NDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLL 416
++A M LK A Y PD+ +Y L+NG+ +K S A LL
Sbjct: 317 ------EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLL 358
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+++N +I L GR+ EA L+ M D PD TY +L++ C K +L
Sbjct: 301 ITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR--KGESLGA---- 354
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ L +M R +PN+ TY ++ C +++ + + +M G+ ++ Y+ ++
Sbjct: 355 -LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVR 413
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
K+ ++ +A E+ +D D AY L
Sbjct: 414 SLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 114/300 (38%), Gaps = 50/300 (16%)
Query: 220 LFQEMLLR--GMSPGGRTYDTLVEAYCLKGE--FSKVFHLQDEVIQKGFLPYYVTSFSPS 275
LFQ +L PG T+ L+ C + S V + + ++ G P
Sbjct: 107 LFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGL--------EPD 158
Query: 276 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 335
VT + + LC R DEA ++++ + E PD +Y+ ++ + ++L +E
Sbjct: 159 QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVD 218
Query: 336 EMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPD 392
EM D D LV +F+ L+++ C A+ L + A + PD
Sbjct: 219 EMRD-------DFDVKPDLV-------SFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 393 SVSYCLLLNGLHKK--ATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE 450
C L N + K S+ ++ + ++ + P I Y+ LI
Sbjct: 265 ----CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIF------------ 308
Query: 451 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
G G V EA TM+ Y P+ A Y L+ C G A + +EM G
Sbjct: 309 ---GLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG 365
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 128/504 (25%), Positives = 199/504 (39%), Gaps = 115/504 (22%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAAC---EAEKNHNLSIPYVRIV 113
++ V+K LC +G + EA +L E + Y T I+ C E EK L I+
Sbjct: 218 TYAIVVKALCRKGNLEEAAMLLIE--NESVFGYKTFINGLCVTGETEKAVAL------IL 269
Query: 114 ELYHQMCVRELSPNE--TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
EL + + L+ ++ ++R FC+ +++ A ++ M E G + +I
Sbjct: 270 ELIDR---KYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVID 326
Query: 172 RFCKNKEMGKALEMKVEMLDKG-----------------------------------IFP 196
R+CKN + +AL +ML KG IF
Sbjct: 327 RYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFL 386
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
D Y + L R+ EA +L QEM RG+ P Y TL++ YCL+G+ L
Sbjct: 387 DRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLI 446
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
DE+I G SP L+TYN L+ GL +E LEI M P+ V+ S
Sbjct: 447 DEMIGNG--------MSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSV 498
Query: 317 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK 376
+I G R++++A D FSSL C E+K
Sbjct: 499 IIEGLCFARKVKEA------------------------------EDFFSSL-EQKCPENK 527
Query: 377 AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAK-----RLLLFYIVAHCLTIPSYI 431
A YC GL KKA F + R ++ + L I Y+
Sbjct: 528 ASFV-------------KGYC--EAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYL 572
Query: 432 --IYDILIEKCAN--NEFKSVV-ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLL 486
+D+L + A +S+ +++ F V EA DTM+ R P+ Y ++
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 487 IFDHCIGGNVHKAYDMYKEMLHYG 510
I +C + KA ++++M G
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRG 656
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 18/306 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
V+ + +I+ LC +++EAE + + + CEA + +VR+
Sbjct: 494 VTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRL--- 550
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
E ++ Y + C +E+A +L+ M+ + P ++I FCK
Sbjct: 551 -------EYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCK 603
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
+ +A + M+++G+ PD+ Y ++I C L +A LF++M RG+ P T
Sbjct: 604 LNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVT 663
Query: 236 YDTLVEAYC-LKGEFSKVFHLQDEVIQKG----FLPYYVTSFSPSLVTYNALIHGLCFFQ 290
Y L++ Y L E + +Q EV ++ + +V Y LI C
Sbjct: 664 YTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMN 723
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
++A E+ M + L+PD V+Y+ +IS + R + A L E+ +K + + ++
Sbjct: 724 NLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKK---YNIPSES 780
Query: 351 NESLVK 356
E+ VK
Sbjct: 781 FEAAVK 786
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 194/474 (40%), Gaps = 61/474 (12%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYV-RIVELYH 117
A++K G EA VL + DCV + AC N + ++ L+
Sbjct: 150 GALVKAYVSLGMFDEATDVLFQSKRLDCV----VDIKACNFLMNRMTEFGKIGMLMTLFK 205
Query: 118 QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 177
Q+ L NE TY +++ C + +EEA L+ E + Y I+ C
Sbjct: 206 QLKQLGLCANEYTYAIVVKALCRKGNLEEAA---MLLIE---NESVFGYKTFINGLCVTG 259
Query: 178 EMGKALEMKVEMLDKGIFP--DVHAY-GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
E KA+ + +E++D+ D+ A G++++ C++ ++ A + EM G
Sbjct: 260 ETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVY 319
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
+++ YC + D+++ KG + V + ++ C E
Sbjct: 320 ACLAVIDRYCKNMNLPEALGFLDKMLGKG--------LKVNCVIVSLILQCYCKMDMCLE 371
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
ALE + +M + D V Y+ ++ + +AFEL EM + +
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR------------GI 419
Query: 355 VKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRF 411
V D+ N+ T L++ YC + K AL L + PD ++Y +L++GL +
Sbjct: 420 VPDVINYTT---LIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEE- 475
Query: 412 AKRLLLFYIVAHCLTIPSYIIYDILIE--------KCANNEFKSV--------VELVKGF 455
+ L ++ + P+ + ++IE K A + F S+ VKG+
Sbjct: 476 -EVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGY 534
Query: 456 RMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHY 509
GL +A +A + Y +VY L F CI G + KA+D+ K+M Y
Sbjct: 535 CEAGLSKKAYKA---FVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAY 585
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 124/291 (42%), Gaps = 33/291 (11%)
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
EL +M R + P+ Y +I +C + +V +A+ ++ M G+SP +Y+ ++S
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+N + LE+ M +G P+ ++I+ LC R++ EA D F L P
Sbjct: 469 ARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSS--LEQKCPEN 526
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
+ + V+ YC G + +K + + + Y L LC +
Sbjct: 527 KA--SFVKGYCEAG-----------LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLE 573
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
+A ++L+ M ++P +I F ++ +R+A L D
Sbjct: 574 KAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVL------------FDTMVERG 621
Query: 354 LVKDLSNHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLLLN 401
L+ DL T++ +++ YC + KAE + Q PD V+Y +LL+
Sbjct: 622 LIPDLF---TYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLD 669
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 163/381 (42%), Gaps = 46/381 (12%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRI-VELYHQMCVRELSPNETTYRCMIRLFCDRN 142
PD +TYN +I C+ K H +R + L M + P+ TY +IR D
Sbjct: 172 PDTITYNMIIGNLCK--KGH------IRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYG 223
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
E+A+ + + G P +Y+ ++ C+ +A+E+ +M +G +PD+ Y
Sbjct: 224 NAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYN 283
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
L+ C + L E + Q +L G+ TY+TL+ + C + +V +E++
Sbjct: 284 SLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV----EEILNI 339
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
Y TS+ P+++TYN LI+GLC + A++ M E PD V+Y+ V+
Sbjct: 340 ----MYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMS 395
Query: 323 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD-------------------- 362
+ + A EL + K TC P T S++ L+
Sbjct: 396 KEGMVDDAIELLGLL--KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 363 --TFSSLVNDYCAEDKAEMALKLRYQAQYLPDSV---SYCLLLNGLHKKATSRFAKRLLL 417
T SL+ +C + E A ++ + + + +Y L++ GL KK A ++
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Query: 418 FYIVAHCLTIPSYIIYDILIE 438
+ C P IY +++
Sbjct: 514 IMLTGGCK--PDETIYTAIVK 532
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 166/388 (42%), Gaps = 43/388 (11%)
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 186
+E T ++ C ++ +A ++ +MA PH S S ++ + ++ KA+ +
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
M+ G PD Y ++I LC + + A L ++M L G P TY+T++
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G + + +Q G P+ ++TY L+ +C + A+E+L M
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPF--------MITYTVLVELVCRYCGSARAIEVLEDMAVEG 274
Query: 307 LDPDEVSYSAVIS-GFRR--IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT 363
PD V+Y+++++ RR + E+ + L + L+ T +L+ L +H+
Sbjct: 275 CYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLE-----LNTVTYNTLLHSLCSHEY 329
Query: 364 FSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAH 423
+ D+ E L + YQ Y P ++Y +L+NGL K +R R + F+
Sbjct: 330 W----------DEVEEILNIMYQTSYCPTVITYNILINGLCK---ARLLSRAIDFF---- 372
Query: 424 CLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 483
Y +L +KC + + ++ G+V++A + + P Y
Sbjct: 373 ---------YQMLEQKCL-PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITY 422
Query: 484 NLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
N +I G + KA ++Y +ML G
Sbjct: 423 NSVIDGLAKKGLMKKALELYHQMLDAGI 450
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 139/363 (38%), Gaps = 94/363 (25%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACE-----------AE 100
+++N +I LC +G IR A +L++M+ PD +TYNT+I + +
Sbjct: 175 ITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKD 234
Query: 101 KNHNLSIPYV-----------------RIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
+ N P++ R +E+ M V P+ TY ++ C R
Sbjct: 235 QLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGN 294
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+EE +++ + GL + +Y+ ++ C ++ + E+ M P V Y +
Sbjct: 295 LEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNI 354
Query: 204 LIQLLCHQRRLLEARDLFQEML--------------LRGMS------------------- 230
LI LC R L A D F +ML L MS
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414
Query: 231 --PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS-------PSLV---- 277
PG TY+++++ KG K L +++ G P +T S +LV
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAG 474
Query: 278 ----------------TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
TY +I GLC + + A+E++ M PDE Y+A++ G
Sbjct: 475 QVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Query: 322 RRI 324
+
Sbjct: 535 EEM 537
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 132/299 (44%), Gaps = 18/299 (6%)
Query: 61 VIKRLCGEGRIREA-ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQM 119
++ R CG R E E + E PD VTYN+L++ C + NL + + +
Sbjct: 253 LVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC---RRGNLE----EVASVIQHI 305
Query: 120 CVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEM 179
L N TY ++ C +E IL +M + P +Y+ +I+ CK + +
Sbjct: 306 LSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLL 365
Query: 180 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 239
+A++ +ML++ PD+ Y ++ + + + +A +L + PG TY+++
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSV 425
Query: 240 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 299
++ KG K L +++ G P +T +LI+G C +EA ++L
Sbjct: 426 IDGLAKKGLMKKALELYHQMLDAGIF--------PDDITRRSLIYGFCRANLVEEAGQVL 477
Query: 300 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL 358
+ +Y VI G + +E+ A E+ +E+ C P D+ ++VK +
Sbjct: 478 KETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEV-VEIMLTGGCKP-DETIYTAIVKGV 534
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/501 (21%), Positives = 209/501 (41%), Gaps = 65/501 (12%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+ +I C + AE +++EM D Y+T++ + + R+
Sbjct: 417 YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLK 476
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E C +P TY C+I L+ ++ +A+ + R+M E+G+ + +YS +I+ F
Sbjct: 477 E-----C--GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGF 529
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
K K+ A + +M+ +G+ PDV Y +I C + A +EM P
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTT 589
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
RT+ ++ Y G+ + + D + + G + P++ T+N LI+GL ++ +
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV--------PTVHTFNGLINGLVEKRQME 641
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
+A+EIL M + +E +Y+ ++ G+ + + KAFE + NE
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ------------NEG 689
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ--AQYLP-DSVSYCLLLNGLHKKATSR 410
L D+ T+ +L+ C + + AL + + A+ +P +S Y +L++G ++
Sbjct: 690 LDVDIF---TYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEKCANN--------------------EFKSVVE 450
A L+ + P Y I C+ K+
Sbjct: 747 EAADLI--QQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 451 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAY------DMYK 504
L+KG+ L +A + M +P+ AVY+ L+ ++ +AY + K
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 864
Query: 505 EMLHYGFVCHMFSVLALIKAL 525
EM+ G + M + + K L
Sbjct: 865 EMVEAGLIVDMGTAVHWSKCL 885
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 125/296 (42%), Gaps = 38/296 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
++ +N +I CG G + A ++EM P T+ +I + S
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK-------SGDMR 606
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
R +E++ M P T+ +I ++ ++E+AV IL M G+S + +Y++I+
Sbjct: 607 RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM 666
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ + GKA E + ++G+ D+ Y L++ C R+ A + +EM R +
Sbjct: 667 QGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIP 726
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP--YYVTSF---------------- 272
Y+ L++ + +G+ + L ++ ++G P + TSF
Sbjct: 727 RNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQT 786
Query: 273 ---------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
P++ TY LI G P++AL M M + PD+ Y +++
Sbjct: 787 IEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 184/426 (43%), Gaps = 61/426 (14%)
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
R E + +M R ++P Y +I + ++EA+ +R M E+G+ +YS I+
Sbjct: 327 RARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIV 386
Query: 171 SRFCK--NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
F K + E + + + K + + YG +I C + A L +EM G
Sbjct: 387 GGFSKAGHAEAADYWFDEAKRIHKTLNASI--YGKIIYAHCQTCNMERAEALVREMEEEG 444
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT---SFSPSLVTYNALIHG 285
+ Y T+++ Y + + DE +KG + + F+P++VTY LI+
Sbjct: 445 IDAPIAIYHTMMDGYTM---------VADE--KKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
+ +ALE+ R M E + + +YS +I+GF ++++ AF +
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV------------ 541
Query: 346 LDQDTNESLVKDLSNHDT--FSSLVNDYCA---EDKAEMALKLRYQAQYLPDSVSYCLLL 400
E +VK+ D ++++++ +C D+A +K + ++ P + ++ ++
Sbjct: 542 -----FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPII 596
Query: 401 NGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRG 459
+G K R + L +F ++ C +P+ ++ LI + + VE++ + G
Sbjct: 597 HGYAKSGDMR--RSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 460 L-VNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSV 518
+ NE Y ++ + G+ KA++ + + + G +F+
Sbjct: 655 VSANE-----------------HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Query: 519 LALIKA 524
AL+KA
Sbjct: 698 EALLKA 703
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/331 (19%), Positives = 131/331 (39%), Gaps = 45/331 (13%)
Query: 180 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 239
G + + +K P +GL+++ + + AR+ F+ M RG++P R Y +L
Sbjct: 291 GDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350
Query: 240 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 299
+ AY + + + ++ ++G SLVTY+ ++ G + A
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEG--------IEMSLVTYSVIVGGFSKAGHAEAADYWF 402
Query: 300 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS 359
+ + Y +I + + +A L EM+++ P+
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI------------- 449
Query: 360 NHDTFSSLVNDY---CAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLL 416
+ ++++ Y E K + K + + P V+Y L+N L+ K + +K L
Sbjct: 450 --AIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLIN-LYTK-VGKISKALE 505
Query: 417 LFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGF-RMRGLVNEAARARDTMLHRN 475
+ ++ E+ + K+ ++ GF +++ N A D M+
Sbjct: 506 ---------------VSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED-MVKEG 549
Query: 476 YRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
+P+ +YN +I C GN+ +A KEM
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEM 580
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 96/405 (23%), Positives = 170/405 (41%), Gaps = 45/405 (11%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
PN ++ C NR+++A+ ++ LM G+ P A +Y+ ++++ CK +G A+++
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
+M D G + Y L++ LC L ++ + ++ +G++P TY L+EA
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
+ + L DE+I KG P+LV+YN L+ G C R D+A+ + R +P
Sbjct: 224 ERGTDEAVKLLDEIIVKG--------GEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK 275
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
+ VSY+ ++ +A L EMD D S+V T++
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMD--------GGDRAPSVV-------TYN 320
Query: 366 SLVNDYCAEDKAEMALKL-----RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYI 420
L+N + E AL++ + Q+ + SY ++ L K+ + L I
Sbjct: 321 ILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Query: 421 VAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG 480
C P+ Y+ + C +N V EA ++ ++
Sbjct: 381 YRRCK--PNEGTYNAIGSLCEHNS---------------KVQEAFYIIQSLSNKQKCCTH 423
Query: 481 AVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
Y +I C GN A+ + EM GF + ALI+ L
Sbjct: 424 DFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL 468
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 145/361 (40%), Gaps = 85/361 (23%)
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
+R++EL M + P+ + Y ++ C R V A+ ++ M + G + +Y+ +
Sbjct: 126 IRVIEL---MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNAL 182
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
+ C + ++L+ ++ KG+ P+ Y L++ +R EA L E++++G
Sbjct: 183 VRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGG 242
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------------- 270
P +Y+ L+ +C +G L E+ KGF V+
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANS 302
Query: 271 --------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMP------------------- 303
+PS+VTYN LI+ L F R ++AL++L+ M
Sbjct: 303 LLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIAR 362
Query: 304 ---------------EMLL---DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
EM+ P+E +Y+A+ S ++++AF + + K+ C
Sbjct: 363 LCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKC-- 420
Query: 346 LDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNG 402
HD + S++ C + A +L Y+ + PD+ +Y L+ G
Sbjct: 421 -------------CTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRG 467
Query: 403 L 403
L
Sbjct: 468 L 468
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 128/290 (44%), Gaps = 22/290 (7%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+VS+N +++ LC +GR EA ++L EM P VTYN LI++ +
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ + HQ V T+Y +I C +V+ V L M + P+ +Y+ I
Sbjct: 341 EMSKGNHQFRV-----TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIG 395
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
S N ++ +A + + +K Y +I LC + A L EM G
Sbjct: 396 SLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFD 455
Query: 231 PGGRTYDTLVEAYCLKGEFS---KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
P TY L+ CL+G F+ +V + +E + P++ +NA+I GLC
Sbjct: 456 PDAHTYSALIRGLCLEGMFTGAMEVLSIMEES----------ENCKPTVDNFNAMILGLC 505
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
+R D A+E+ M E P+E +Y+ ++ G EL A E+ E+
Sbjct: 506 KIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 145/336 (43%), Gaps = 37/336 (11%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSI 107
E LVS+N ++ C EGR +A + +E+ + V+YN L+ C +
Sbjct: 243 EPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGR------ 296
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG--LSPHADS 165
+ L +M + +P+ TY +I R E+A+ +L+ M++ A S
Sbjct: 297 -WEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y+ +I+R CK ++ ++ EM+ + P+ Y + L H ++ EA + Q +
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLS 415
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
+ Y +++ + C KG F L E+ + GF P TY+ALI G
Sbjct: 416 NKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGF--------DPDAHTYSALIRG 467
Query: 286 LCFFQRPDEALEILRGMPEML-LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 344
LC A+E+L M E P +++A+I G +IR A E+ M +K
Sbjct: 468 LCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEK---- 523
Query: 345 PLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 380
K + N T++ LV ED+ E+A
Sbjct: 524 -----------KRMPNETTYAILVEGIAHEDELELA 548
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 43/210 (20%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIP--- 108
S+N VI RLC EG++ L EM P+ TYN I + CE HN +
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCE----HNSKVQEAF 408
Query: 109 -----------------YVRIV-------------ELYHQMCVRELSPNETTYRCMIRLF 138
Y ++ +L ++M P+ TY +IR
Sbjct: 409 YIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGL 468
Query: 139 CDRNRVEEAVGILRLMAE-KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 197
C A+ +L +M E + P D+++ +I CK + A+E+ M++K P+
Sbjct: 469 CLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPN 528
Query: 198 VHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
Y +L++ + H+ L A+++ E+ LR
Sbjct: 529 ETTYAILVEGIAHEDELELAKEVLDELRLR 558
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 21/277 (7%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
P+ TY +I+ + ++EA + R M E G+ P +Y+ +IS KN + + L++
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA-RDLFQEMLLRGMSPGGRTYDTLVEAYC 244
EML G+ PD+ +Y L+ R EA + L +++ L G+ PG TY+ L++A C
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALC 165
Query: 245 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
G D I+ + + P L+TYN LI+GLC +R ++R + +
Sbjct: 166 KSGH-------TDNAIE--LFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKK 216
Query: 305 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTF 364
P+ V+Y+ ++ + + + + K +L L+M K+ + D N ++V
Sbjct: 217 SGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKM--KKEGYTFDGFANCAVV--------- 265
Query: 365 SSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLN 401
S+L+ AE+ E +L D VSY LLN
Sbjct: 266 SALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 169/397 (42%), Gaps = 59/397 (14%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
++++N +IK I EA V + M +PD TYN+LIS A KN L+
Sbjct: 48 VITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAA---KNLMLN---- 100
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRL-MAEKGLSPHADSYSRI 169
R+++L+ +M LSP+ +Y ++ + R EA IL + GL P D+Y+ +
Sbjct: 101 RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
+ CK+ A+E+ + L + P++ Y +LI LC RR+ + +E+ G
Sbjct: 161 LDALCKSGHTDNAIEL-FKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHL-----QDEVIQKGFLPYYVTSF------------ 272
+P TY T+++ Y K L ++ GF V S
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 273 -----------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEML-LDPDEVSYSAVISG 320
S +V+YN L++ L F +A++ L EM L PD+ +++ +++G
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLN-LYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 321 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 380
I A +K + S+V T + L++ C + A
Sbjct: 339 LLNIGNTGGA--------EKHLACIGEMGMQPSVV-------TCNCLIDGLCKAGHVDRA 383
Query: 381 LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLL 417
++L + + + D +Y +++ L K A +LLL
Sbjct: 384 MRL-FASMEVRDEFTYTSVVHNLCKDGRLVCASKLLL 419
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 130/320 (40%), Gaps = 46/320 (14%)
Query: 274 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
P ++TYN LI G F DEA + R M E ++PD +Y+++ISG + L + +L
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 334 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ----AQY 389
D+ + L D+ +++T S Y + A K+ ++ A
Sbjct: 106 ------------FDEMLHSGLSPDMWSYNTLMSC---YFKLGRHGEAFKILHEDIHLAGL 150
Query: 390 LPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSV 448
+P +Y +LL+ L K + A L + P + Y+ILI C + SV
Sbjct: 151 VPGIDTYNILLDALCKSGHTDNAIEL---FKHLKSRVKPELMTYNILINGLCKSRRVGSV 207
Query: 449 VELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLH 508
+++ + G Y P Y ++ + + K ++ +M
Sbjct: 208 DWMMRELKKSG----------------YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKK 251
Query: 509 YGFVCHMFS----VLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLKILDEIDPERC 564
G+ F+ V ALIK +E Y M ++R+ RS ++ L L D
Sbjct: 252 EGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGN-- 309
Query: 565 IIYALLDVLAEKAMDGLLLD 584
+ A+ D+L E M GL D
Sbjct: 310 -LDAVDDLLEEIEMKGLKPD 328
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 191/454 (42%), Gaps = 66/454 (14%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
NA+IK G + E V ++M + P TYN L+ N +S +V E
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLM--------NGLVSAMFVDSAE 242
Query: 115 -LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
++ M + P+ TY MI+ +C + ++A+ LR M +G +Y +I
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+ + G + + EM +KGI HA+ L+I LC + +L E +F+ M+ +G P
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
Y L++ Y G L +I +G F P +VTY+ +++GLC R +
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEG--------FKPDVVTYSVVVNGLCKNGRVE 414
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
EAL+ L + + YS++I G + + +A L EM +K T +S
Sbjct: 415 EALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGC-------TRDS 467
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMALKL--RYQAQYLPDSV--SYCLLLNGLHKKATS 409
+++L++ + K + A+ L R + + D +Y +LL+G+ K+ +
Sbjct: 468 YC--------YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRN 519
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 469
A +L +D++I+K L G + G V A + D
Sbjct: 520 EEALKL-----------------WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILD 562
Query: 470 TMLHRNYRPEGAVYNL----LIFDHCIGGNVHKA 499
+ P G + + +I C G + +A
Sbjct: 563 ELA-----PMGVILDAACEDMINTLCKAGRIKEA 591
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 112/281 (39%), Gaps = 38/281 (13%)
Query: 30 EKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPD 85
EKG+ PP+ +F+ VI LC EG++ E TV + M + P+
Sbjct: 320 EKGIQVPPH------------------AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 86 CVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVE 145
Y LI ++ + + L H+M P+ TY ++ C RVE
Sbjct: 362 VAIYTVLIDGYAKSGSVED-------AIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVE 414
Query: 146 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 205
EA+ GL+ ++ YS +I K + +A + EM +KG D + Y LI
Sbjct: 415 EALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALI 474
Query: 206 QLLCHQRRLLEARDLFQEM-LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
R++ EA LF+ M G TY L+ + + L D +I KG
Sbjct: 475 DAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKG- 533
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
+P+ + AL GLC + A +IL + M
Sbjct: 534 -------ITPTAACFRALSTGLCLSGKVARACKILDELAPM 567
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 117/284 (41%), Gaps = 56/284 (19%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
+V+++ V+ LC GR+ EA ++
Sbjct: 397 VVTYSVVVNGLCKNGRVEEA--------------------------------------LD 418
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
+H L+ N Y +I RV+EA + M+EKG + + Y+ +I F
Sbjct: 419 YFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 175 KNKEMGKALEMKVEM-LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
K++++ +A+ + M ++G V+ Y +L+ + + R EA L+ M+ +G++P
Sbjct: 479 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 538
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA----LIHGLCFF 289
+ L CL G+ ++ + DE+ +P V +A +I+ LC
Sbjct: 539 ACFRALSTGLCLSGKVARACKILDEL-------------APMGVILDAACEDMINTLCKA 585
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
R EA ++ G+ E + + +I+ R++ + A +L
Sbjct: 586 GRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKL 629
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 180/421 (42%), Gaps = 58/421 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
L++ N ++ LC G I +A+ +++EM + P+CV+YNTLI C +N+
Sbjct: 156 LITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSV---NNVD---- 208
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILR---LMAEKGLSPHADSYS 167
+ + L++ M + PN T ++ C + + L L + + +P
Sbjct: 209 KALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVIC 268
Query: 168 RIISRFC-KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
I+ C KN + +ALE+ EM K + D Y ++I+ LC ++ A +M+
Sbjct: 269 TILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 328
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 286
RG++P TY+TL+ A C +G+F + L + G +P ++Y +I GL
Sbjct: 329 RGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG--------VAPDQISYKVIIQGL 380
Query: 287 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA---FELKLEMDQKETC 343
C + A E L M + L P+ + ++ VI G+ R + A L L K
Sbjct: 381 CIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNV 440
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGL 403
+ TN +L+ + L++ + +++ + PD+ +Y LLL
Sbjct: 441 Y-----TNNALIH---GYVKGGRLIDAWWVKNEMR-------STKIHPDTTTYNLLLGAA 485
Query: 404 HKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNE 463
R A +L YD ++ + + + ELV+G +G + +
Sbjct: 486 CTLGHLRLAFQL-----------------YDEMLRRGCQPDIITYTELVRGLCWKGRLKK 528
Query: 464 A 464
A
Sbjct: 529 A 529
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 19/280 (6%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVR 111
V +N +I+ LC G + A + +M +PD TYNTLISA C+ K +
Sbjct: 301 VVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGK-------FDE 353
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+L+ M ++P++ +Y+ +I+ C V A L M + L P ++ +I
Sbjct: 354 ACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVID 413
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ + + AL + ML G+ P+V+ LI RL++A + EM + P
Sbjct: 414 GYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHP 473
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY+ L+ A C G F L DE++++G P ++TY L+ GLC+ R
Sbjct: 474 DTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGC--------QPDIITYTELVRGLCWKGR 525
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 331
+A +L + + D V + + + R++ +A+
Sbjct: 526 LKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/422 (21%), Positives = 175/422 (41%), Gaps = 48/422 (11%)
Query: 129 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 188
+ + ++R C + +++ A+ + + M G+ P +++ +++ CK + KA + E
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 248
M + G P+ +Y LI+ LC + +A LF M G+ P T + +V A C KG
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 249 F-SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEILRGMPEML 306
+ L +E++ + +P + ++ CF +ALE+ + M +
Sbjct: 242 IGNNNKKLLEEILDSS------QANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKN 295
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD--TF 364
+ D V Y+ +I G + A+ +M VK N D T+
Sbjct: 296 VPADSVVYNVIIRGLCSSGNMVAAYGFMCDM-----------------VKRGVNPDVFTY 338
Query: 365 SSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFAK-------- 413
++L++ C E K + A L Q PD +SY +++ GL A
Sbjct: 339 NTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLK 398
Query: 414 -----RLLLFYIVA-----HCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNE 463
+LL+ +V + T + + ++++ + L+ G+ G + +
Sbjct: 399 SSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLID 458
Query: 464 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 523
A ++ M P+ YNLL+ C G++ A+ +Y EML G + + L++
Sbjct: 459 AWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVR 518
Query: 524 AL 525
L
Sbjct: 519 GL 520
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 63/341 (18%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACE------------- 98
VS+N +IK LC + +A + M P+ VT N ++ A C+
Sbjct: 192 VSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLE 251
Query: 99 -----AEKNHNLSI--------------PYVRIVELYHQMCVRELSPNETTYRCMIRLFC 139
++ N L I V+ +E++ +M + + + Y +IR C
Sbjct: 252 EILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLC 311
Query: 140 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 199
+ A G + M ++G++P +Y+ +IS CK + +A ++ M + G+ PD
Sbjct: 312 SSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQI 371
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
+Y ++IQ LC + A + ML + P ++ +++ Y G+ S + + +
Sbjct: 372 SYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431
Query: 260 IQKGFLP---------------------YYV------TSFSPSLVTYNALIHGLCFFQRP 292
+ G P ++V T P TYN L+ C
Sbjct: 432 LSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHL 491
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
A ++ M PD ++Y+ ++ G L+KA L
Sbjct: 492 RLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESL 532
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 117/300 (39%), Gaps = 72/300 (24%)
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 295
+ +++ CL+G+ L+ ++I G +P L+T+N L++GLC ++A
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIP--------GLITHNHLLNGLCKAGYIEKA 175
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
++R M EM P+ VSY+ +L+
Sbjct: 176 DGLVREMREMGPSPNCVSYN-------------------------------------TLI 198
Query: 356 KDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGL-HKKATSRFAKR 414
K L + VN+ DKA + P+ V+ ++++ L K K+
Sbjct: 199 KGLCS-------VNNV---DKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 415 LLLFYIVAHCLTIP-SYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLH 473
LL + + P +I IL++ C N G V +A M
Sbjct: 249 LLEEILDSSQANAPLDIVICTILMDSCFKN---------------GNVVQALEVWKEMSQ 293
Query: 474 RNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNE 533
+N + VYN++I C GN+ AY +M+ G +F+ LI AL + +++E
Sbjct: 294 KNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDE 353
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 133/317 (41%), Gaps = 56/317 (17%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEM-----TDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
FN ++K C G I A V++EM + P+ +TY+TL+ ++
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK-------EA 251
Query: 113 VELYHQMCVRE-LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
VEL+ M +E +SP+ T+ MI FC VE A IL M + G +P+ +YS +++
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMN 311
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM------- 224
FCK ++ +A + E+ G+ D Y L+ C EA L EM
Sbjct: 312 GFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRA 371
Query: 225 -------LLRGMSPGGR---------------------TYDTLVEAYCLKGEFSKVFHLQ 256
+LRG+S GR +Y ++ A C GE K
Sbjct: 372 DTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFL 431
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
+ ++G P++ T+N L+ LC + + +L G + L P S+ A
Sbjct: 432 SVMSERGIWPHH--------ATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGA 483
Query: 317 VISGFRRIRELRKAFEL 333
V+ + R+L FEL
Sbjct: 484 VVESICKERKLVHVFEL 500
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 91/182 (50%), Gaps = 10/182 (5%)
Query: 158 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI-FPDVHAYGLLIQLLCHQRRLLE 216
GL P+ ++ ++ CKN ++ A + EM GI +P+ Y L+ L R E
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 217 ARDLFQEMLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPS 275
A +LF++M+ + G+SP T++ ++ +C GE + + D + + G +P+
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC--------NPN 302
Query: 276 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 335
+ Y+AL++G C + EA + + + L D V Y+ +++ F R E +A +L
Sbjct: 303 VYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLG 362
Query: 336 EM 337
EM
Sbjct: 363 EM 364
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 49/246 (19%)
Query: 29 TEKGLVSPP---NVLIPGFA-AGKATTEKCLVSF-------------NAVIKRLCGEGRI 71
+++G+ P NV+I GF AG+ K ++ F +A++ C G+I
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKI 319
Query: 72 REAETVLQEMTDP----DCVTYNTLISAAC-EAEKNHNLSI------PYVRIVELYHQMC 120
+EA+ E+ D V Y TL++ C E + + + R L + +
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVI 379
Query: 121 VRELSP---------------------NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL 159
+R LS N+ +YR ++ C +E+AV L +M+E+G+
Sbjct: 380 LRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 160 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 219
PH +++ ++ R C++ + + + L G+ P ++G +++ +C +R+L+ +
Sbjct: 440 WPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFE 499
Query: 220 LFQEML 225
L ++
Sbjct: 500 LLDSLV 505
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 124/269 (46%), Gaps = 18/269 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT---DPDCVTYNTLISAACEAEKNHNLSIPYVR 111
L SFN ++ LC R+ +A + + + D VTYN +++ C ++ +
Sbjct: 161 LASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRT-------PK 213
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+E+ +M R ++PN TTY M++ F ++ A M ++ +Y+ ++
Sbjct: 214 ALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVH 273
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
F E+ +A + EM+ +G+ P V Y +IQ+LC + + A +F+EM+ RG P
Sbjct: 274 GFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEP 333
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY+ L+ GEFS+ L + +G P+ TYN +I
Sbjct: 334 NVTTYNVLIRGLFHAGEFSRGEELMQRMENEG--------CEPNFQTYNMMIRYYSECSE 385
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISG 320
++AL + M P+ +Y+ +ISG
Sbjct: 386 VEKALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 119/249 (47%), Gaps = 29/249 (11%)
Query: 159 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 218
+ P +++ + R+ + KA+++ + M + G F D+ ++ ++ +LC +R+ +A
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 219 DLFQEMLLRG-MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 277
+LF+ LRG S TY+ ++ +CL K + E++++G +P+L
Sbjct: 182 ELFRA--LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERG--------INPNLT 231
Query: 278 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
TYN ++ G + A E M + + D V+Y+ V+ GF E+++A +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV---- 287
Query: 338 DQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSV 394
D+ E ++ ++ T+++++ C +D E A+ + + Y P+
Sbjct: 288 --------FDEMIREGVLPSVA---TYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVT 336
Query: 395 SYCLLLNGL 403
+Y +L+ GL
Sbjct: 337 TYNVLIRGL 345
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 15/187 (8%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++ V+ G I+ A V EM P TYN +I C+ + N
Sbjct: 265 VVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN------ 318
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
V ++ +M R PN TTY +IR +++ M +G P+ +Y+ +I
Sbjct: 319 -AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI 377
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR----LLEARDLFQEMLL 226
+ + E+ KAL + +M P++ Y +LI + ++R ++ F + +L
Sbjct: 378 RYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEIL 437
Query: 227 RGMSPGG 233
R S G
Sbjct: 438 RLQSKSG 444
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 139/306 (45%), Gaps = 39/306 (12%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
F ++K C EG EA + EM + + YNTL+ A +N S +
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA-------YNKSNHIEEVE 399
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
L+ +M + L P+ TY ++ + R + + +LR M + GL P+ SY+ +IS +
Sbjct: 400 GLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAY 459
Query: 174 CKNKEMGK-ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ K+M A + + M G+ P H+Y LI +A F+EM G+ P
Sbjct: 460 GRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPS 519
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQD----EVIQKGFLPY------------------YVT 270
TY ++++A+ G+ K+ + E I+ + Y V+
Sbjct: 520 VETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVS 579
Query: 271 SFS-----PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 325
FS PS++TYN L++ + + ++L+ M + L PD ++YS +I F R+R
Sbjct: 580 EFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVR 639
Query: 326 ELRKAF 331
+ ++AF
Sbjct: 640 DFKRAF 645
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 121/280 (43%), Gaps = 17/280 (6%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+NA I L R +A V + M PD VT LI+ +A ++ +
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAK------EVW 329
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E++ +M + + ++ + +++ FCD EEA+ I M +KG+ + Y+ ++ +
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
K+ + + + EM DKG+ P Y +L+ + + L +EM G+ P
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
++Y L+ AY + S ++ FL PS +Y ALIH +
Sbjct: 450 KSYTCLISAYGRTKKMS-------DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
+A M + + P +Y++V+ FRR + K E+
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 55/325 (16%)
Query: 279 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI-RELRKAFELKLEM 337
YNA I GL QR D+A E+ M ++ + PD V+ + +I+ R+ R ++ +E+ +M
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 338 DQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSV 394
+K W + D F LV +C E E AL ++ + + +++
Sbjct: 336 SEKGVKW---------------SQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTI 380
Query: 395 SYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVEL--- 451
Y L++ +K ++ + LF + PS Y+IL++ A +VE
Sbjct: 381 VYNTLMDAYNK--SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLR 438
Query: 452 ----------VKGF--------RMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIG 493
VK + R + + + AA A M +P Y LI + +
Sbjct: 439 EMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 494 GNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQL 553
G KAY ++EM G + + +++ A R + + L + +L
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAF-------------RRSGDTGKLMEIWKL 545
Query: 554 KILDEIDPERCIIYALLDVLAEKAM 578
+ ++I R LLD A++ +
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGL 570
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 131/299 (43%), Gaps = 40/299 (13%)
Query: 59 NAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTL------ISAACEAEKN------ 102
N +++ C + +I EA ++ +M PD VT+NTL I + C AE
Sbjct: 464 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRML 523
Query: 103 HNLSIPYVRI-----------------VELYHQMCVRELSPNETTYRCMIRLFCDRNRVE 145
HN P VR + +++M + PN + +I+ F + N ++
Sbjct: 524 HNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMD 583
Query: 146 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 205
++ LM E G+ P ++S +++ + +M + E+ +ML+ GI PD+HA+ +L
Sbjct: 584 GVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
Query: 206 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
+ +A + +M G+ P Y ++ +C GE K + ++
Sbjct: 644 KGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCG---- 699
Query: 266 PYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
+ SP+L TY LI G ++P +A E+L+ M + P + + G++ I
Sbjct: 700 ---IVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSI 755
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 183/454 (40%), Gaps = 87/454 (19%)
Query: 58 FNAVIKRLCGEGRIREA----ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
N +I+R GR +EA T+++E P +TY TL++A + H+L +
Sbjct: 326 MNGLIER----GRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSL-------L 374
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
L ++ L P+ + +I + +++A+ I M E G P A +++ +I +
Sbjct: 375 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 174 CKNKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
K ++ ++ + ML D+ + P+ +L+Q C+QR++ EA ++ +M G+ P
Sbjct: 435 GKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPD 494
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
T++TL +AY G +D +I + P++ T +++G C +
Sbjct: 495 VVTFNTLAKAYARIGSTCTA---EDMIIPR----MLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
+EAL M E+ + P+ ++++I GF I ++ E+ M+
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLME-------------- 593
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
E +K PD V++ L+N +
Sbjct: 594 -------------------------EFGVK--------PDVVTFSTLMNAWSSVGDMKRC 620
Query: 413 KRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 472
+ IY ++E + + + L KG+ G +A + + M
Sbjct: 621 EE-----------------IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
RP +Y +I C G + KA +YK+M
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 170/410 (41%), Gaps = 55/410 (13%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNHNLSIPYVRIV 113
FNA+I G + +A + ++M + C T+NTLI + K S R++
Sbjct: 392 FNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS----RLL 447
Query: 114 ELYHQMCVRE--LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ M +R+ L PN+ T +++ +C++ ++EEA I+ M G+ P +++ +
Sbjct: 448 D----MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 172 RFCKNKEMGKALEMKV-EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ + A +M + ML + P+V G ++ C + ++ EA F M G+
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVH 563
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-------------------- 270
P +++L++ + + V + D + + G P VT
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 271 -------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
P + ++ L G P++A +IL M + + P+ V Y+ +ISG+
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCS 683
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
E++KA ++ K+ C + L +L+ ++T + KAE LK
Sbjct: 684 AGEMKKAMQV-----YKKMCGIV------GLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Query: 384 RYQAQYLPDSVSYCLLLNGLHK--KATSRFAKRLLLFYIVAHCLTIPSYI 431
+P + L+ +G + S A L + + L IP+ I
Sbjct: 733 MEGKNVVPTRKTMQLIADGWKSIGVSNSNDANTLGSSFSTSSKLNIPNNI 782
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 137/348 (39%), Gaps = 46/348 (13%)
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
DV + L+ L + R EA +F ++ G P TY TLV A + F + L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
+V + G P + +NA+I+ D+A++I M E P +++
Sbjct: 378 SKVEKNG--------LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNT 429
Query: 317 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDK 376
+I G+ +I +L ++ L M + E P D+ N LV +C + K
Sbjct: 430 LIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN--------------ILVQAWCNQRK 475
Query: 377 AEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIY 433
E A + Y+ Q PD V++ L + ++ A+ +++ ++ + +
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCG 535
Query: 434 DILIEKCANNEFKSVV-------------------ELVKGFRMRGLVNEAARARDTMLHR 474
I+ C + + + L+KGF ++ D M
Sbjct: 536 TIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF 595
Query: 475 NYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF--VCHMFSVLA 520
+P+ ++ L+ G++ + ++Y +ML G H FS+LA
Sbjct: 596 GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILA 643
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 221/493 (44%), Gaps = 67/493 (13%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
N +I+R GR EA+TV + + + P ++Y TL++A ++ ++S IV
Sbjct: 52 MNVLIER----GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSIS----SIV 103
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
Q + + + +I F + +E+AV L M E GL+P +Y+ +I +
Sbjct: 104 SEVEQSGTK---LDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Query: 174 CKNKEMGKALEMKVEMLDKG---IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ ++ E+ ML++G + P++ + +L+Q C ++++ EA ++ ++M G+
Sbjct: 161 GIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVR 220
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY+T+ Y KGE + EV++K + P+ T ++ G C
Sbjct: 221 PDTVTYNTIATCYVQKGE---TVRAESEVVEKMVMKEKA---KPNGRTCGIVVGGYCREG 274
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE-----------LRKAF--ELKLEM 337
R + L +R M EM ++ + V ++++I+GF + + L +F E++L
Sbjct: 275 RVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVG 334
Query: 338 DQKETCWPLDQDTNESLVKDL---SNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLP 391
+QK L +L+K+ ++ T+S+++N + + +KA K +A P
Sbjct: 335 NQKMKVQVL------TLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 388
Query: 392 DSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVEL 451
D+ +Y +L G + + A+ LL IV + P+ +I+ +I +N
Sbjct: 389 DAHAYSILAKGYVRAKEPKKAEELLETLIVE---SRPNVVIFTTVISGWCSN-------- 437
Query: 452 VKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
G +++A R + M P + L++ + KA ++ + M G
Sbjct: 438 -------GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGV 490
Query: 512 VCHMFSVLALIKA 524
+ L L +A
Sbjct: 491 KPENSTFLLLAEA 503
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 163/393 (41%), Gaps = 52/393 (13%)
Query: 134 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 193
++ + +R R EA + + +AE G P SY+ +++ K+ G + E+ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 194 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 253
D + +I + +A +M G++P TY+TL++ Y + G+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 254 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 313
L D ++++G + P++ T+N L+ C ++ +EA E+++ M E + PD V+
Sbjct: 171 ELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 314 YSAVISGFRRIRE-LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 372
Y+ + + + + E +R E+ +M KE P N T +V YC
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKP--------------NGRTCGIVVGGYC 271
Query: 373 AEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPS 429
E + L+ + + + + V + L+NG F V I
Sbjct: 272 REGRVRDGLRFVRRMKEMRVEANLVVFNSLING---------------FVEVMDRDGIDE 316
Query: 430 YIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFD 489
+ +L+ F VELV +M+ + M N + + Y+ ++
Sbjct: 317 VTLTLLLM------SFNEEVELVGNQKMK------VQVLTLMKECNVKADVITYSTVMNA 364
Query: 490 HCIGGNVHKAYDMYKEMLHYGFV--CHMFSVLA 520
G + KA ++KEM+ G H +S+LA
Sbjct: 365 WSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILA 397
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 132/307 (42%), Gaps = 45/307 (14%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN +++ C + ++ EA V+++M + PD VTYNT+ A C +K +
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAES--- 244
Query: 113 VELYHQMCVRELS-PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
E+ +M ++E + PN T ++ +C RV + + +R M E + + ++ +I+
Sbjct: 245 -EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 172 RFCK---------------------NKEMGKALEMKVEML----DKGIFPDVHAYGLLIQ 206
F + E+ +MKV++L + + DV Y ++
Sbjct: 304 GFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMN 363
Query: 207 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
+ +A +F+EM+ G+ P Y L + Y E K L L
Sbjct: 364 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL---------LE 414
Query: 267 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 326
+ P++V + +I G C D+A+ + M + + P+ ++ ++ G+ +++
Sbjct: 415 TLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQ 474
Query: 327 LRKAFEL 333
KA E+
Sbjct: 475 PWKAEEV 481
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 192/447 (42%), Gaps = 65/447 (14%)
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
R ++Y +M N T+ +I FC +++ EA+ + M + G+ P+ S++ +I
Sbjct: 201 RFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMI 260
Query: 171 SRFCKNKEMGKALEM--KVEMLDKG-IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
CK +M AL++ K+ M+ + P+ Y +I C RL A + +M+
Sbjct: 261 DGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKS 320
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G+ RTY LV+AY G + L DE+ KG + + V YN++++ L
Sbjct: 321 GVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLV--------VNTVIYNSIVYWLF 372
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL- 346
+ A+ +LR M + D + + V+ G R +++A E + ++ +K+ +
Sbjct: 373 MEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIV 432
Query: 347 ------------------DQDTNESLVKDLS-NHDTFSSLVNDYCAEDKAEMALKL---R 384
DQ LV+ LS + +F +L++ Y E K E AL++
Sbjct: 433 CHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGM 492
Query: 385 YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNE 444
+ + V Y ++NGL K+ + A+ V + + I + Y+ L+ N
Sbjct: 493 IKMNKTSNLVIYNSIVNGLSKRGMAGAAE------AVVNAMEIKDIVTYNTLL----NES 542
Query: 445 FKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEG------AVYNLLIFDHCIGGNVHK 498
K+ G V EA D +L + + +G +N++I C G+ K
Sbjct: 543 LKT-----------GNVEEA----DDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEK 587
Query: 499 AYDMYKEMLHYGFVCHMFSVLALIKAL 525
A ++ K M+ G V + LI +
Sbjct: 588 AKEVLKFMVERGVVPDSITYGTLITSF 614
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 162/357 (45%), Gaps = 39/357 (10%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDP--DCV--TYNTLISAACEAEKNHNLSIPYVR 111
V++N+VI C GR+ AE + +M DC TY L+ A A +
Sbjct: 292 VTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSD-------E 344
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ L +M + L N Y ++ +E A+ +LR M K + + + ++
Sbjct: 345 ALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVR 404
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
C+N + +A+E + ++ +K + D+ + L+ ++L A + ML++G+S
Sbjct: 405 GLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSL 464
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
++ TL++ Y +G+ + + D +I+ + + +LV YN++++GL
Sbjct: 465 DAISFGTLIDGYLKEGKLERALEIYDGMIK--------MNKTSNLVIYNSIVNGLSKRGM 516
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
A ++ M D V+Y+ +++ + + +A ++ +M ++ D + +
Sbjct: 517 AGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQ------DGEKS 566
Query: 352 ESLVKDLSNHDTFSSLVNDYC---AEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 405
SLV TF+ ++N C + +KA+ LK + +PDS++Y L+ K
Sbjct: 567 VSLV-------TFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSK 616
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 180/421 (42%), Gaps = 40/421 (9%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN VI C E ++ EA +V M P+ V++N +I AC K ++ +++
Sbjct: 220 TFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGAC---KTGDMRFA-LQL 275
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ M +SPN TY +I FC R++ A I M + G+ + +Y ++
Sbjct: 276 LGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDA 335
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ + +AL + EM KG+ + Y ++ L + + A + ++M + M
Sbjct: 336 YGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQID 395
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
T +V C G + Q ++ +K + +V +N L+H ++
Sbjct: 396 RFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLV--------EDIVCHNTLMHHFVRDKKL 447
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL---KLEMDQKETCWPLDQD 349
A +IL M L D +S+ +I G+ + +L +A E+ ++M++ +
Sbjct: 448 ACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSI 507
Query: 350 TN-----------ESLVKDLSNHD--TFSSLVNDYCAEDKAEMALKL--RYQAQYLPDSV 394
N E++V + D T+++L+N+ E A + + Q Q SV
Sbjct: 508 VNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSV 567
Query: 395 S---YCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFK-SVVE 450
S + +++N L K + AK +L F + +P I Y LI + + + VVE
Sbjct: 568 SLVTFNIMINHLCKFGSYEKAKEVLKFMVERG--VVPDSITYGTLITSFSKHRSQEKVVE 625
Query: 451 L 451
L
Sbjct: 626 L 626
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
LV +N+++ L G AE V+ M D VTYNTL++ E+ K N+ + +
Sbjct: 501 LVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLN---ESLKTGNVEEADDILSK 557
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
+ Q E S + T+ MI C E+A +L+ M E+G+ P + +Y +I+ F
Sbjct: 558 MQKQDG--EKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFS 615
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAY 201
K++ K +E+ ++ +G+ P H Y
Sbjct: 616 KHRSQEKVVELHDYLILQGVTPHEHIY 642
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 118 QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 177
QM V L + +Y +I C R+E A L M ++G+SP+ +++ +S +
Sbjct: 415 QMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRG 474
Query: 178 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 237
++ K + ++L G PDV + L+I LC + + +A D F+EML G+ P TY+
Sbjct: 475 DVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYN 534
Query: 238 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 297
L+ + C G+ + L ++ + G SP L YNA I C ++ +A E
Sbjct: 535 ILIRSCCSTGDTDRSVKLFAKMKENG--------LSPDLYAYNATIQSFCKMRKVKKAEE 586
Query: 298 ILRGMPEMLLDPDEVSYSAVISGFR---RIRELRKAF 331
+L+ M + L PD +YS +I R E R+ F
Sbjct: 587 LLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMF 623
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 106/214 (49%), Gaps = 11/214 (5%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
S+NAVI LC RI A L EM D P+ VT+NT +S +++ ++
Sbjct: 427 SYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG-------YSVRGDVKKV 479
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ ++ V P+ T+ +I C +++A + M E G+ P+ +Y+ +I
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
C + +++++ +M + G+ PD++AY IQ C R++ +A +L + ML G+ P
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
TY TL++A G S+ + + + G +P
Sbjct: 600 NFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 114/519 (21%), Positives = 201/519 (38%), Gaps = 93/519 (17%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P YN +I A K+++L + Y++ ++ C P+ TY +I C +
Sbjct: 178 PSTRLYNAVIDALV---KSNSLDLAYLKFQQMRSDGC----KPDRFTYNILIHGVCKKGV 230
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE----MKVEMLDK------- 192
V+EA+ +++ M ++G P+ +Y+ +I F + +AL+ M+V L+
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 193 ---GIF---PDVHAYGLLIQL------------------LCHQRRLLEARDLFQEMLLRG 228
GIF P A+ +L+ L + E +++ RG
Sbjct: 291 FVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 288
P T++ + + + + D + +G P F+ LV AL++
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKP----GFNGYLVLVQALLNA--- 403
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 348
QR E L+ M L SY+AVI + R + A EM D+
Sbjct: 404 -QRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ--------DR 454
Query: 349 DTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 405
+ +LV TF++ ++ Y K L+ + PD +++ L++N L +
Sbjct: 455 GISPNLV-------TFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Query: 406 KATSRFA----KRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLV 461
+ A K +L + I P+ I Y+ILI C + G
Sbjct: 508 AKEIKDAFDCFKEMLEWGIE------PNEITYNILIRSCCST---------------GDT 546
Query: 462 NEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLAL 521
+ + + M P+ YN I C V KA ++ K ML G F+ L
Sbjct: 547 DRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTL 606
Query: 522 IKALYCDERYNEMSWVIRNTLRSCNLNDSEQLKILDEID 560
IKAL R +E + + R + DS ++++E+D
Sbjct: 607 IKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELD 645
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 139/353 (39%), Gaps = 42/353 (11%)
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G+ P Y +I L L A FQ+M G P TY+ L+ C KG +
Sbjct: 175 GMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEA 234
Query: 253 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 312
L ++ Q+G P++ TY LI G R DEAL+ L M L+P+E
Sbjct: 235 IRLVKQMEQEGN--------RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEA 286
Query: 313 SYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 372
+ + G R KAFE+ + +++D+N ++ + L N+
Sbjct: 287 TIRTFVHGIFRCLPPCKAFEVLVGF--------MEKDSN---LQRVGYDAVLYCLSNNSM 335
Query: 373 AEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYII 432
A++ + K+ + Y+PDS ++ ++ L K R+ ++ P +
Sbjct: 336 AKETGQFLRKIGERG-YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRG--VKPGFNG 392
Query: 433 YDILIEKCANNE-FKSVVELVKGFRMRGL-------------------VNEAARARDTML 472
Y +L++ N + F +K + GL + AA M
Sbjct: 393 YLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ 452
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
R P +N + + + G+V K + + +++L +GF + + +I L
Sbjct: 453 DRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCL 505
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 57 SFNAVIKRLCGE-GRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVR 111
SFN V+ C G REAE V EM + D V+Y+++IS K +L+ +
Sbjct: 268 SFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCY---SKGGSLN----K 320
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAE-KGLSPHADSYSRII 170
+++L+ +M + P+ Y ++ + V EA +++ M E KG+ P+ +Y+ +I
Sbjct: 321 VLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLI 380
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
CK ++ +A ++ EML+KG+FP + Y +++L R E +L +M G
Sbjct: 381 KPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCE 437
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY L+ C +F V L DE+ +K + P L +Y +IHGL
Sbjct: 438 PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEK--------TVGPDLSSYIVMIHGLFLNG 489
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
+ +EA + M + + P+E + S F
Sbjct: 490 KIEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 138/345 (40%), Gaps = 66/345 (19%)
Query: 109 YVRIVELYHQMC------------------VRELSP---NETTYRCMIRLFCDRNRVEEA 147
YVR V YH M +R+ SP N T MIR +C + V +A
Sbjct: 157 YVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKA 216
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
+ L D + ++S C+ K + A + DK F D ++ +++
Sbjct: 217 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSFNIVLNG 275
Query: 208 LCHQ-RRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
C+ EA ++ EM G+ +Y +++ Y G +KV L D + ++ P
Sbjct: 276 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335
Query: 267 ---------------YYVT-------------SFSPSLVTYNALIHGLCFFQRPDEALEI 298
+V+ P++VTYN+LI LC ++ +EA ++
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQV 395
Query: 299 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDL 358
M E L P +Y A + R +R + FEL +M +K C P +T L++ L
Sbjct: 396 FDEMLEKGLFPTIRTYHAFM---RILRTGEEVFELLAKM-RKMGCEPT-VETYIMLIRKL 450
Query: 359 SNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGL 403
F +++ + EM K PD SY ++++GL
Sbjct: 451 CRWRDFDNVLLLW-----DEMKEK-----TVGPDLSSYIVMIHGL 485
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 19/274 (6%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVRIV 113
F +I+ G + +A V ++T DCV + NTLI+ + N L +
Sbjct: 119 FMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVD---NGELE----KAK 171
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+ L PN ++ +I+ F D+ E A + M E + P +Y+ +I
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
C+N +MGKA + +M+ K I P+ +GLL++ LC + EA+ L +M RG PG
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGL 291
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
Y L+ +G + L E+ ++ P +V YN L++ LC R
Sbjct: 292 VNYGILMSDLGKRGRIDEAKLLLGEMKKR--------RIKPDVVIYNILVNHLCTECRVP 343
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 327
EA +L M P+ +Y +I GF RI +
Sbjct: 344 EAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDF 377
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 118/268 (44%), Gaps = 19/268 (7%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
VSFN +IK + A V EM + P VTYN+LI C +N ++ +
Sbjct: 187 VSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC---RNDDMG----K 239
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
L M + + PN T+ +++ C + EA ++ M +G P +Y ++S
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K + +A + EM + I PDV Y +L+ LC + R+ EA + EM ++G P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY +++ +C +F ++ + ++ + P+ T+ ++ GL
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAML--------ASRHCPTPATFVCMVAGLIKGGN 411
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVIS 319
D A +L M + L ++ ++S
Sbjct: 412 LDHACFVLEVMGKKNLSFGSGAWQNLLS 439
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 53/338 (15%)
Query: 181 KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 240
+AL + + + G D +Y LI L R + + + R + + L+
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 241 EAYCLKGEFSK---VFHLQDEVIQKGFLPYYVTSFS--PSLVTYNALIHGLCFFQRPDEA 295
+ Y G K VFH +TSF ++ + N LI+ L ++A
Sbjct: 124 QHYGKAGSVDKAIDVFH-------------KITSFDCVRTIQSLNTLINVLVDNGELEKA 170
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
G +M L P+ VS++ +I GF + A ++ EM L+ + S+V
Sbjct: 171 KSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM--------LEMEVQPSVV 222
Query: 356 KDLSNHDTFSSLVNDYCAED---KAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
T++SL+ C D KA+ L+ + + P++V++ LL+ GL K A
Sbjct: 223 -------TYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEA 275
Query: 413 KRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTML 472
K+L+ C P + Y IL+ RG ++EA M
Sbjct: 276 KKLMFDMEYRGCK--PGLVNYGILMSDLGK---------------RGRIDEAKLLLGEMK 318
Query: 473 HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
R +P+ +YN+L+ C V +AY + EM G
Sbjct: 319 KRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKG 356
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 155/388 (39%), Gaps = 39/388 (10%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ L+HQ + +Y +I + ILRL+ + + + +I
Sbjct: 66 LSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQH 125
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ K + KA+++ ++ + + LI +L L +A+ F + P
Sbjct: 126 YGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPN 185
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
+++ L++ + K ++ + DE+++ PS+VTYN+LI LC
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLE--------MEVQPSVVTYNSLIGFLCRNDDM 237
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
+A +L M + + P+ V++ ++ G E +A +L +M+ + C P
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYR-GCKP------- 289
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
L N+ S + D+A++ L + + PD V Y +L+N L + A
Sbjct: 290 ----GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEA 345
Query: 413 KRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTM 471
R+L + C P+ Y ++I+ C +F S + ++ + M
Sbjct: 346 YRVLTEMQMKGCK--PNAATYRMMIDGFCRIEDFDSGLNVL----------------NAM 387
Query: 472 LHRNYRPEGAVYNLLIFDHCIGGNVHKA 499
L + P A + ++ GGN+ A
Sbjct: 388 LASRHCPTPATFVCMVAGLIKGGNLDHA 415
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 82/195 (42%), Gaps = 11/195 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+F ++K LC +G EA+ ++ +M P V Y L+S + + +
Sbjct: 257 VTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKL---- 312
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
L +M R + P+ Y ++ C RV EA +L M KG P+A +Y +I
Sbjct: 313 ---LLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
FC+ ++ L + ML P + ++ L L A + + M + +S
Sbjct: 370 GFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSF 429
Query: 232 GGRTYDTLVEAYCLK 246
G + L+ C+K
Sbjct: 430 GSGAWQNLLSDLCIK 444
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 132/350 (37%), Gaps = 43/350 (12%)
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
EEA+ + E G SYS +I + K++ ++ + + + + L
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
IQ + +A D+F ++ ++ +TL+ GE K D
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKD--- 179
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
P+ V++N LI G + A ++ M EM + P V+Y+++I R
Sbjct: 180 -----MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 325 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 384
++ KA L +M +K N TF L+ C + + A KL
Sbjct: 235 DDMGKAKSLLEDMIKKRI---------------RPNAVTFGLLMKGLCCKGEYNEAKKLM 279
Query: 385 YQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCA 441
+ +Y P V+Y +L++ L K+ AK LL + P +IY+IL+
Sbjct: 280 FDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK--LLLGEMKKRRIKPDVVIYNILVN--- 334
Query: 442 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHC 491
L R V EA R M + +P A Y ++I C
Sbjct: 335 --------HLCTECR----VPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 17/258 (6%)
Query: 66 CGE-GRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVREL 124
CGE +++E + + E PD TYN LI + S + ++L+ +M +++
Sbjct: 131 CGELEKMKERLSSIDEFGKPDACTYNILIHGCSQ-------SGCFDDALKLFDEMVKKKV 183
Query: 125 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKAL 183
P T+ +I C +RV+EA+ + M + G+ P Y+ +I C+ E+ A
Sbjct: 184 KPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAF 243
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
++K E + I D Y LI L R E + +EM +G P TY+ L+ +
Sbjct: 244 KLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGF 303
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
C++ + + DE+++KG P +++YN ++ ++ +EA + MP
Sbjct: 304 CVENDSESANRVLDEMVEKGL--------KPDVISYNMILGVFFRIKKWEEATYLFEDMP 355
Query: 304 EMLLDPDEVSYSAVISGF 321
PD +SY V G
Sbjct: 356 RRGCSPDTLSYRIVFDGL 373
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 10/221 (4%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
P+ TY +I ++A+ + M +K + P ++ +I CK+ + +AL+M
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 186 KVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 244
K +ML G+ P VH Y LI+ LC L A L E + Y TL+ +
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 245 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
G ++V + +E+ +KG P VTYN LI+G C + A +L M E
Sbjct: 270 KAGRSNEVSMILEEMSEKGC--------KPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 305 MLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
L PD +SY+ ++ F RI++ +A L +M ++ C P
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR-GCSP 361
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 12/216 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEM-----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
V+F +I LC + R++EA + +M P Y +LI A C+ LS +
Sbjct: 188 VTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQI---GELSFAFK 244
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E Y ++ + Y +I R E IL M+EKG P +Y+ +I
Sbjct: 245 LKDEAYEG----KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLI 300
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ FC + A + EM++KG+ PDV +Y +++ + ++ EA LF++M RG S
Sbjct: 301 NGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
P +Y + + C +F + + DE++ KG+ P
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 11/196 (5%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+ ++IK LC G + A + E + D Y+TLIS+ +A +++ +S+
Sbjct: 226 YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSM------ 279
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+ +M + P+ TY +I FC N E A +L M EKGL P SY+ I+ F
Sbjct: 280 -ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVF 338
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+ K+ +A + +M +G PD +Y ++ LC + EA + EML +G P
Sbjct: 339 FRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRR 398
Query: 234 RTYDTLVEAYCLKGEF 249
+ ++ C G+
Sbjct: 399 DRLEGFLQKLCESGKL 414
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
++ +I L GR E +L+EM++ PD VTYN LI+ C + + + R++
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESAN----RVL 316
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+ +M + L P+ +Y ++ +F + EEA + M +G SP SY +
Sbjct: 317 D---EMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGL 373
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
C+ + +A + EML KG P +Q LC + LE L RG++
Sbjct: 374 CEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGK-LEILSKVISSLHRGIAGDA 432
Query: 234 RTYDTLVEAYC 244
+ ++ C
Sbjct: 433 DVWSVMIPTMC 443
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 113/282 (40%), Gaps = 38/282 (13%)
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY+ L+ G F L DE+++K P+ VT+ LIHGLC
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKK--------KVKPTGVTFGTLIHGLCKDS 201
Query: 291 RPDEALEILRGMPEML-LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
R EAL++ M ++ + P Y+++I +I EL AF+LK D+
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLK------------DEA 249
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATS 409
+ D + + T S + ++ M L+ + PD+V+Y +L+NG + S
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 410 RFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARD 469
A R+L D ++EK + S ++ F EA +
Sbjct: 310 ESANRVL-----------------DEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFE 352
Query: 470 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
M R P+ Y ++ C G +A + EML G+
Sbjct: 353 DMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGY 394
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 119/533 (22%), Positives = 210/533 (39%), Gaps = 111/533 (20%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
+++ V++ LC E RI +AE+V+ +M DPD Y+ +I N++IP +
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEG-----HRKNMNIP--K 344
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
V+++++M + N +++ +C EA + + E +S Y+
Sbjct: 345 AVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFD 404
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K ++ +A+E+ EM KGI PDV Y LI C Q + +A DL EM G +P
Sbjct: 405 ALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTP 464
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT------------------SFS 273
Y+ L G + F + +G P YVT +F
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFY 524
Query: 274 PSLVTYN-----ALIHGLCFFQRPDEALE------------------------------- 297
SL + +++ G C D A E
Sbjct: 525 ESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKA 584
Query: 298 --ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
+L M ++ ++P++ Y +I + R+ +RKA E + + +V
Sbjct: 585 QDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREF------------FEILVTKKIV 632
Query: 356 KDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
DL T++ ++N YC ++ + A L + PD V+Y +LLN + R
Sbjct: 633 PDLF---TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREM 689
Query: 413 KRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNEAARARDTM 471
+ + IP + Y I+I + C N+ K V L K + R +V + T+
Sbjct: 690 EAFDV---------IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTY--TV 738
Query: 472 LHRN--------------YRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
L +N +P+ Y +LI C G++ +A ++ +M+ G
Sbjct: 739 LLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESG 791
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 118/518 (22%), Positives = 195/518 (37%), Gaps = 91/518 (17%)
Query: 77 VLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIR 136
++ E +P CV Y I C N I Y + L + + S YR ++R
Sbjct: 244 LISETRNP-CVFYLNFIEGLC---LNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVR 299
Query: 137 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK---- 192
C R+E+A ++ M + G+ P YS II KN + KA+++ +ML K
Sbjct: 300 GLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRI 359
Query: 193 ---------------GIFPDVH----------------AYGLLIQLLCHQRRLLEARDLF 221
G F + + Y + L ++ EA +LF
Sbjct: 360 NCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELF 419
Query: 222 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 281
+EM +G++P Y TL+ CL+G+ S F L E+ G +P +V YN
Sbjct: 420 REMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTG--------KTPDIVIYNV 471
Query: 282 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
L GL EA E L+ M + P V+++ VI G EL KA ++ K
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Query: 342 TCWPLDQDTNESLVKDLS-----NH--------------DTFSSLVNDYCAE----DKAE 378
++ + S+VK +H + +L CAE KA+
Sbjct: 532 ------RENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQ 585
Query: 379 MALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIE 438
L ++ P+ Y L+ + R A+ F I+ +P Y I+I
Sbjct: 586 DLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKARE--FFEILVTKKIVPDLFTYTIMIN 643
Query: 439 K-CANNEFKSVVELVKGFRMRGLVNEAAR------------ARDTMLHRNYRPEGAVYNL 485
C NE K L + + R + + + M + P+ Y +
Sbjct: 644 TYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTI 703
Query: 486 LIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 523
+I +C ++ K Y ++K+M V + + L+K
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 741
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 35/253 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLS---- 106
L ++ +I C ++A + ++M PD VTY+ L+++ E + +
Sbjct: 635 LFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDV 694
Query: 107 IPYV-----------------RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVG 149
IP V ++ L+ M RE+ P+ TY +++ +RN
Sbjct: 695 IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN------- 747
Query: 150 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 209
+ R M + P Y+ +I CK ++G+A + +M++ G+ PD Y LI C
Sbjct: 748 LSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCC 807
Query: 210 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 269
L EA+ +F M+ G+ P Y L+ C G K L E+++KG P
Sbjct: 808 KMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP--- 864
Query: 270 TSFSPSLVTYNAL 282
T S S V Y L
Sbjct: 865 TKASLSAVHYAKL 877
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 105/506 (20%), Positives = 187/506 (36%), Gaps = 115/506 (22%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAAC-----------EAE 100
V +N L G++ EA + +EMT PD + Y TLI C E
Sbjct: 397 VCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIE 456
Query: 101 KNHNLSIPYVRI-----------------VELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
+ P + I E M R + P T+ +I D
Sbjct: 457 MDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGE 516
Query: 144 VEEAVGILRLMAEK---------------GLSPHA-------------DSYSRIISRFCK 175
+++A + K G HA Y + + C
Sbjct: 517 LDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCA 576
Query: 176 NKE-MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K+ + KA ++ M G+ P+ YG LI C + +AR+ F+ ++ + + P
Sbjct: 577 EKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLF 636
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
TY ++ YC E + + L +++ ++ P +VTY+ L++ D
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRR--------DVKPDVVTYSVLLNS-------DP 681
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
L++ R M + PD V Y+ +I+ + + +L+K + L +M ++E +
Sbjct: 682 ELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRRE------------I 729
Query: 355 VKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA-QYLPDSVSYCLLLNGLHKKATSRFAK 413
V D+ T++ L+ ++K E L +A PD Y +L++ K AK
Sbjct: 730 VPDVV---TYTVLL-----KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAK 781
Query: 414 RLLLFYI--------------VAHCLTI----PSYIIYDILIEKCANNEFKSVVELVKGF 455
R+ I +A C + + +I+D +IE + L+ G
Sbjct: 782 RIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGC 841
Query: 456 RMRGLVNEAARARDTMLHRNYRPEGA 481
G V +A + ML + +P A
Sbjct: 842 CRNGFVLKAVKLVKEMLEKGIKPTKA 867
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 147/399 (36%), Gaps = 45/399 (11%)
Query: 134 MIRLFCDRNRVEEAVGIL-RLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK 192
+++ + + + +EA+ I R G +P + + +ISR + + E+
Sbjct: 152 LVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERL 211
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G+ D H Y L++Q L E L +L+ Y +E CL
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 253 FHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEV 312
+ L + L S + Y ++ GLC+ R ++A ++ M + +DPD
Sbjct: 272 YFLLQPLRDANIL----VDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVY 327
Query: 313 SYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 372
YSA+I G R+ + KA ++ +M +K + N SS++ YC
Sbjct: 328 VYSAIIEGHRKNMNIPKAVDVFNKMLKK---------------RKRINCVIVSSILQCYC 372
Query: 373 AEDKAEMA---LKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPS 429
A K + D V Y + + L K + + + LF + P
Sbjct: 373 QMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGK--LGKVEEAIELFREMTGKGIAPD 430
Query: 430 YIIYDILIEKC-----ANNEFKSVVE---------------LVKGFRMRGLVNEAARARD 469
I Y LI C ++ F ++E L G GL EA
Sbjct: 431 VINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLK 490
Query: 470 TMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLH 508
M +R +P +N++I G + KA Y+ + H
Sbjct: 491 MMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH 529
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 194/456 (42%), Gaps = 76/456 (16%)
Query: 19 IRGFAAGKATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVL 78
I GF+ + KGL+ + L A + T F ++I R +G + A VL
Sbjct: 104 IHGFSITRDDPSKGLLILRDCLRNHGAFPSSLT------FCSLIYRFVEKGEMDNAIEVL 157
Query: 79 QEMTDP------DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYR 132
+ MT+ D + +IS C+ K P + + + L PN TY
Sbjct: 158 EMMTNKNVNYPFDNFVCSAVISGFCKIGK------PELALGFFESAVDSGVLVPNLVTYT 211
Query: 133 CMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK 192
++ C +V+E ++R + ++G YS I + K + AL EM++K
Sbjct: 212 TLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEK 271
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G+ DV +Y +LI L + + EA L +M+ G+ P TY ++ C G+ +
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 253 FHLQDEVIQKG-----FLPYYVT-------------SFS-----------PSLVTYNALI 283
F L + ++ G FL YVT +FS PS++TYN +I
Sbjct: 332 FVLFNRILSVGIEVDEFL--YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVI 389
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIR------ELRKAF-ELKLE 336
+GLC R EA E+ +G+ D ++YS ++ + +++ E+R+ F E K+
Sbjct: 390 NGLCMAGRVSEADEVSKGVV-----GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIP 444
Query: 337 MD-------QKETCWPLDQDTNESLVKDLSNHD------TFSSLVNDYCAEDKAEMALKL 383
MD K ++L + + D T+++++ YC + E AL++
Sbjct: 445 MDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEM 504
Query: 384 --RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLL 417
+ + +V Y +++ L KK A +L+
Sbjct: 505 FNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLI 540
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 173/423 (40%), Gaps = 88/423 (20%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY--SRIISRFCKNKEMGKAL 183
P+ T+ +I F ++ ++ A+ +L +M K ++ D++ S +IS FCK + AL
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 184 EMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQ-------------------- 222
+D G+ P++ Y L+ LC ++ E RDL +
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 223 ---------------EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 267
EM+ +GM+ +Y L++ +G + L ++I++G
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV--- 308
Query: 268 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 327
P+L+TY A+I GLC + +EA + + + ++ DE Y +I G R L
Sbjct: 309 -----EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNL 363
Query: 328 RKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA 387
+AF + +M+Q+ S++ T+++++N C + A ++
Sbjct: 364 NRAFSMLGDMEQR--------GIQPSIL-------TYNTVINGLCMAGRVSEADEV--SK 406
Query: 388 QYLPDSVSYCLLLNGLHK----KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANN 443
+ D ++Y LL+ K A +R L + I D+++
Sbjct: 407 GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFL-----------EAKIPMDLVMCNI--- 452
Query: 444 EFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
L+K F + G EA M + P+ A Y +I +C G + +A +M+
Sbjct: 453 -------LLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMF 505
Query: 504 KEM 506
E+
Sbjct: 506 NEL 508
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 131/323 (40%), Gaps = 53/323 (16%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVR 111
V +N +I LC +G + A VL E+ + D T TL+ + + +
Sbjct: 517 VCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYG 576
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS------ 165
+ +L +C+ L+ I L C R E A+ + +M KGL+ S
Sbjct: 577 LEQLNSDVCLGMLND-------AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTL 629
Query: 166 ----------------------------YSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 197
Y+ II+ CK + KAL + +G+ +
Sbjct: 630 VDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLN 689
Query: 198 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 257
Y LI LC Q L+EA LF + G+ P TY L++ C +G F L D
Sbjct: 690 TITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLD 749
Query: 258 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 317
++ KG + P+++ YN+++ G C + ++A+ ++ + PD + S++
Sbjct: 750 SMVSKGLV--------PNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSM 801
Query: 318 ISGFRRIRELRKAFELKLEMDQK 340
I G+ + ++ +A + E K
Sbjct: 802 IKGYCKKGDMEEALSVFTEFKDK 824
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 44 FAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEA 99
FA + T +++N++I LC +G + EA + + + P VTY LI C+
Sbjct: 680 FAKSRGVTLNT-ITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKE 738
Query: 100 EKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL 159
++ +L M + L PN Y ++ +C + E+A+ ++ +
Sbjct: 739 G-------LFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRV 791
Query: 160 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 219
+P A + S +I +CK +M +AL + E DK I D + LI+ C + R+ EAR
Sbjct: 792 TPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARG 851
Query: 220 LFQEMLL 226
L +EML+
Sbjct: 852 LLREMLV 858
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 110/253 (43%), Gaps = 12/253 (4%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
Y +I C + +A+ + +G++ + +Y+ +I+ C+ + +AL + +
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
+ G+ P YG+LI LC + L+A L M+ +G+ P Y+++V+ YC G+
Sbjct: 718 NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTE 777
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 310
V+ + + +P T +++I G C +EAL + + + D
Sbjct: 778 DAMR----VVSRKMMG----RVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 370
+ +I GF + +A L EM E+ L + +L+ ++ + +
Sbjct: 830 FFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVD----AELAESESIRGFLVE 885
Query: 371 YCAEDKAEMALKL 383
C + + A+K+
Sbjct: 886 LCEQGRVPQAIKI 898
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 18/232 (7%)
Query: 71 IREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETT 130
+ ET L M D + Y +I+ C+ V+ + L R ++ N T
Sbjct: 643 VNAGETTLSSM---DVIDYTIIINGLCKEG-------FLVKALNLCSFAKSRGVTLNTIT 692
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
Y +I C + + EA+ + + GL P +Y +I CK A ++ M+
Sbjct: 693 YNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMV 752
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
KG+ P++ Y ++ C + +A + ++ ++P T ++++ YC KG+
Sbjct: 753 SKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDME 812
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 302
+ + F + + S + LI G C R +EA +LR M
Sbjct: 813 EALSV--------FTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 19/273 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
++++ ++ C + EA + +M D PD V +N ++ + K +
Sbjct: 298 MMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD------ 351
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++L+H M + PN +Y MIR FC ++ +E A+ M + GL P A Y+ +I
Sbjct: 352 -AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ F K++ E+ EM +KG PD Y LI+L+ +Q+ A ++ +M+ +
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 470
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T++ ++++Y + + + +E+I+KG P +Y LI GL
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC--------PDDNSYTVLIRGLIGEG 522
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+ EA L M + + + Y+ + F R
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 8/220 (3%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
+PN TY ++ +C + EA I M ++GL P +++ ++ ++++ A+
Sbjct: 294 FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
++ M KG P+V +Y ++I+ C Q + A + F +M+ G+ P Y L+ +
Sbjct: 354 KLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
+ + V+ L E+ +KG P TYNALI + + P+ A I M
Sbjct: 414 GTQKKLDTVYELLKEMQEKG--------HPPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 304 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
+ ++P +++ ++ + R + EM +K C
Sbjct: 466 QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC 505
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 169/414 (40%), Gaps = 52/414 (12%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D TYN+++S + + + +V + +M + L ET + ++ F
Sbjct: 194 DSRTYNSMMSILAKTRQ-------FETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKER 245
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
++AVGI LM + ++ + ++ + K +GK ++ + L + P++ Y +L
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVL 304
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL---KGEFSKVFHLQDEVIQ 261
+ C R L+EA ++ +M+ +G+ P ++ ++E K + K+FH +
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFH-----VM 359
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
K P P++ +Y +I C + A+E M + L PD Y+ +I+GF
Sbjct: 360 KSKGP------CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Query: 322 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 381
++L +EL EM +K P D T +L+K ++N + A
Sbjct: 414 GTQKKLDTVYELLKEMQEKGH--PPDGKTYNALIKLMANQKM----------PEHATRIY 461
Query: 382 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCA 441
Q + P ++ +++ Y +A + +++ +I+K
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKS----------------YFMARNYEM-GRAVWEEMIKKGI 504
Query: 442 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGN 495
+ S L++G G EA R + ML + + YN D GG
Sbjct: 505 CPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/429 (18%), Positives = 165/429 (38%), Gaps = 67/429 (15%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIIS 171
++L H + V L + R FC AE+ G + + +Y+ ++S
Sbjct: 157 LDLSHDLIVEVLERFRHARKPAFRFFC-------------WAAERQGFAHDSRTYNSMMS 203
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K ++ + + EM KG+ + + + ++ + +A +F+ M
Sbjct: 204 ILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
G T + L+++ + L D++ ++ F+P+++TY L++G C +
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKER---------FTPNMMTYTVLLNGWCRVRN 313
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
EA I M + L PD V+++ ++ G R R+ A +L M K C
Sbjct: 314 LIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC-------- 365
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKAT 408
N +++ ++ D+C + E A++ + PD+ Y L+ G +
Sbjct: 366 -------PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ-- 416
Query: 409 SRFAKRLLLFYIVAHCLT----IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
K+L Y + + P Y+ LI+ AN + + A
Sbjct: 417 ----KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK---------------MPEHA 457
Query: 465 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
R + M+ P +N+++ + + N +++EM+ G S LI+
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Query: 525 LYCDERYNE 533
L + + E
Sbjct: 518 LIGEGKSRE 526
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 61/311 (19%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD---PDCVTYNTLISAACEAEKNHNLSIPYVR 111
LV+FN ++ LC +R+A+ V + M D PD TY+ L+ K NL P R
Sbjct: 203 LVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWG---KEPNL--PKAR 257
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRL------------------ 153
E++ +M P+ TY M+ + C RV+EA+GI+R
Sbjct: 258 --EVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVH 315
Query: 154 -----------------MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 196
M G+ ++ +I FCK M + EM KG+ P
Sbjct: 316 TYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTP 375
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
+ + ++++ L + EA D+F++M ++ P TY +++ +C K E +
Sbjct: 376 NSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVW 434
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
+ +KG PS+ T++ LI+GLC + +A +L M EM + P V+
Sbjct: 435 KYMRKKGVF--------PSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVT--- 483
Query: 317 VISGFRRIREL 327
F R+R+L
Sbjct: 484 ----FGRLRQL 490
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 163/359 (45%), Gaps = 34/359 (9%)
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 186
N T+ ++R + +V+EA+ +M + L P+ +++ ++S CK+K + KA E+
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
M D+ PD Y +L++ + L +AR++F+EM+ G P TY +V+ C
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G + I + P + P+ Y+ L+H R +EA++ M
Sbjct: 286 GRVDEALG-----IVRSMDP---SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG 337
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK------ETCWPLDQDTNESLVKDLS- 359
+ D ++++I F + ++ + + EM K ++C + + E KD +
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Query: 360 ------------NHDTFSSLVNDYCAEDKAEMALKL-RYQAQ--YLPDSVSYCLLLNGLH 404
+ DT++ ++ +C + + E A K+ +Y + P ++ +L+NGL
Sbjct: 398 DVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC 457
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNE 463
++ T++ K +L + PS + + L + E + V++ + +M LVNE
Sbjct: 458 EERTTQ--KACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNE-KMNVLVNE 513
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACE-AEKNHNLSIPYVRI 112
FN++I C R++ VL+EM P+ + N ++ E EK+ +
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV----- 399
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ +M ++ P+ TY +I++FC++ +E A + + M +KG+ P ++S +I+
Sbjct: 400 ---FRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLING 455
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 213
C+ + KA + EM++ GI P +G L QLL + R
Sbjct: 456 LCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEER 496
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 151/355 (42%), Gaps = 51/355 (14%)
Query: 162 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 221
+ +++ ++ ++ + +++ +A+ M + P++ A+ L+ LC + + +A+++F
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 222 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 281
+ M R +P +TY L+E + + K + E+I G P +VTY+
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGC--------HPDIVTYSI 277
Query: 282 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
++ LC R DEAL I+R M + P YS ++ + L +A + LEM++
Sbjct: 278 MVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER-- 335
Query: 342 TCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAE---MALKLRYQAQYLPDSVSYCL 398
+ D++ F+SL+ +C ++ + LK P+S S +
Sbjct: 336 ----------SGMKADVA---VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 382
Query: 399 LLNGLHKKATSRFAKRLLLFYIVAHCLTI--PSYIIYDILIEK-CANNEFKSVVELVKGF 455
+L L ++ A F + + + P Y ++I+ C E ++ ++ K
Sbjct: 383 ILRHLIERGEKDEA-----FDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYM 437
Query: 456 RMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
R +G+ P +++LI C KA + +EM+ G
Sbjct: 438 RKKGVF----------------PSMHTFSVLINGLCEERTTQKACVLLEEMIEMG 476
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 114/255 (44%), Gaps = 20/255 (7%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEKNHNLS 106
E+ + SFNA++ ++ EA +E+ + PD VTYNT+I A C +
Sbjct: 154 ERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDD-- 211
Query: 107 IPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 166
I+ ++ ++ P+ ++ ++ F R E I LM K LSP+ SY
Sbjct: 212 -----ILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
+ + +NK+ AL + M +GI PDVH Y LI L E + EM
Sbjct: 267 NSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKE 326
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 286
+G++P TY L+ C KG+ + + +E I+ L P++ Y ++ L
Sbjct: 327 KGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLS------RPNM--YKPVVERL 378
Query: 287 CFFQRPDEALEILRG 301
+ DEA ++++
Sbjct: 379 MGAGKIDEATQLVKN 393
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 97/208 (46%), Gaps = 9/208 (4%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVE 188
++ ++ + + +++EA+ + + EK G++P +Y+ +I C+ M L + E
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 248
+ G PD+ ++ L++ + +E ++ M + +SP R+Y++ V +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 249 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 308
F+ +L D + +G SP + TYNALI +E ++ M E L
Sbjct: 279 FTDALNLIDVMKTEGI--------SPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 309 PDEVSYSAVISGFRRIRELRKAFELKLE 336
PD V+Y +I + +L +A E+ E
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 110/227 (48%), Gaps = 10/227 (4%)
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
L +Q ++ + R M+ L+ E A + M E S++ ++S +
Sbjct: 110 LQYQKKFDDIKSEDFVIRIML-LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYV 168
Query: 175 KNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+K++ +A++ E+ +K GI PD+ Y +I+ LC + + + +F+E+ G P
Sbjct: 169 NSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDL 228
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
+++TL+E + + F + + D + K + SP++ +YN+ + GL ++
Sbjct: 229 ISFNTLLEEFYRRELFVEGDRIWDLMKSK--------NLSPNIRSYNSRVRGLTRNKKFT 280
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+AL ++ M + PD +Y+A+I+ +R L + + EM +K
Sbjct: 281 DALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 31/216 (14%)
Query: 198 VHAYGLLIQLLCHQRRLLEARDLFQEMLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
V ++ L+ + ++L EA F+E+ + G++P TY+T+++A C KG + +
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP--DEALEILRGMPEMLLDPDEVSY 314
+E+ + GF P L+++N L+ F++R E I M L P+ SY
Sbjct: 217 EELEKNGF--------EPDLISFNTLLEE--FYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
Query: 315 SAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE 374
++ + G R ++ A L +D E + D+ T+++L+ Y +
Sbjct: 267 NSRVRGLTRNKKFTDALNL------------IDVMKTEGISPDVH---TYNALITAYRVD 311
Query: 375 DKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKA 407
+ E +K + + PD+V+YC+L+ L KK
Sbjct: 312 NNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG 347
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 19/273 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
++++ ++ C + EA + +M D PD V +N ++ + K +
Sbjct: 297 MMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD------ 350
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++L+H M + PN +Y MIR FC ++ +E A+ M + GL P A Y+ +I
Sbjct: 351 -AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ F K++ E+ EM +KG PD Y LI+L+ +Q+ ++ +M+ +
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 469
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T++ ++++Y + + + DE+I+KG P +Y LI GL
Sbjct: 470 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC--------PDDNSYTVLIRGLISEG 521
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+ EA L M + + + Y+ + F R
Sbjct: 522 KSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 554
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 95/454 (20%), Positives = 184/454 (40%), Gaps = 54/454 (11%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D TYN+++S + + + +V + +M + L ET + ++ F
Sbjct: 193 DSRTYNSMMSILAKTRQ-------FETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKER 244
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
++AVGI LM + ++ + ++ + K +GK ++ + L + P++ Y +L
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVL 303
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL---KGEFSKVFHLQDEVIQ 261
+ C R L+EA ++ +M+ G+ P ++ ++E K + K+FH +
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-----VM 358
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
K P P++ +Y +I C + A+E M + L PD Y+ +I+GF
Sbjct: 359 KSKGP------CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGF 412
Query: 322 RRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMAL 381
++L +EL EM +K P D T +L+K ++N E +
Sbjct: 413 GTQKKLDTVYELLKEMQEKGH--PPDGKTYNALIKLMANQKM---------PEHGTRIYN 461
Query: 382 KLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCA 441
K+ Q + P ++ +++ Y VA + ++D +I+K
Sbjct: 462 KM-IQNEIEPSIHTFNMIMKS----------------YFVARNYEM-GRAVWDEMIKKGI 503
Query: 442 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 501
+ S L++G G EA R + ML + + YN D GG +
Sbjct: 504 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEE 563
Query: 502 MYKEMLHYG--FVCHMFSVLALIKALYCDERYNE 533
+ + G +F+ A + C +R+ E
Sbjct: 564 LAQRAKFSGKFAAAEIFARWAQMTRRRCKQRFME 597
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 79/429 (18%), Positives = 162/429 (37%), Gaps = 67/429 (15%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIIS 171
++L H + V L + R FC AE+ G + + +Y+ ++S
Sbjct: 156 LDLSHDLIVEVLERFRHARKPAFRFFC-------------WAAERQGFAHDSRTYNSMMS 202
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K ++ + + EM KG+ + + + ++ + +A +F+ M
Sbjct: 203 ILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 261
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
G T + L+++ + L D++ ++ F+P+++TY L++G C +
Sbjct: 262 GVETINCLLDSLGRAKLGKEAQVLFDKLKER---------FTPNMMTYTVLLNGWCRVRN 312
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
EA I M + L PD V+++ ++ G R + A +L M K C
Sbjct: 313 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC-------- 364
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKAT 408
N +++ ++ D+C + E A++ + PD+ Y L+ G +
Sbjct: 365 -------PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ-- 415
Query: 409 SRFAKRLLLFYIVAHCLT----IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
K+L Y + + P Y+ LI+ AN + +
Sbjct: 416 ----KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK---------------MPEHG 456
Query: 465 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
R + M+ P +N+++ + + N ++ EM+ G S LI+
Sbjct: 457 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 525 LYCDERYNE 533
L + + E
Sbjct: 517 LISEGKSRE 525
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 154/350 (44%), Gaps = 43/350 (12%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
F +++R +++A VL EM +PD + L+ A C+ S + +
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E + PN + ++ +C ++ EA +L M E GL P ++ ++S +
Sbjct: 230 E--------KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH-QRRLLEARDLFQEMLLRGMSPG 232
+M A ++ +M +G P+V+ Y +LIQ LC ++R+ EA +F EM G
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
TY L+ +C G K + + D++ +KG +P S VTY ++ ++
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMP--------SQVTYMQIMVAHEKKEQF 393
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ---- 348
+E LE++ M PD + Y+ VI ++ E+++A L EM+ +D
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 349 ---DTNESLVKDLSNH---------------DTFSSLVNDYCAEDKAEMA 380
T++ + + NH T SL+N+ +DK EMA
Sbjct: 454 INGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMA 503
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 19/261 (7%)
Query: 30 EKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMT----DPD 85
E L+ VL+ AG E +V F ++ G++ +A ++ +M +P+
Sbjct: 249 EGKLMEAKEVLVQMKEAG---LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPN 305
Query: 86 CVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVE 145
Y LI A C EK + ++ VE+ C ++ TY +I FC ++
Sbjct: 306 VNCYTVLIQALCRTEKRMDEAMRV--FVEMERYGCEADI----VTYTALISGFCKWGMID 359
Query: 146 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 205
+ +L M +KG+ P +Y +I+ K ++ + LE+ +M +G PD+ Y ++I
Sbjct: 360 KGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVI 419
Query: 206 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
+L C + EA L+ EM G+SPG T+ ++ + +G + + E++ +G
Sbjct: 420 RLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Query: 266 PYYVTSFSPSLVTYNALIHGL 286
+P T +L++ L
Sbjct: 480 S------APQYGTLKSLLNNL 494
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 124/273 (45%), Gaps = 19/273 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
++++ ++ C + EA + +M D PD V +N ++ + K +
Sbjct: 298 MMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD------ 351
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++L+H M + PN +Y MIR FC ++ +E A+ M + GL P A Y+ +I
Sbjct: 352 -AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ F K++ E+ EM +KG PD Y LI+L+ +Q+ ++ +M+ +
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 470
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P T++ ++++Y + + + DE+I+KG P +Y LI GL
Sbjct: 471 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC--------PDDNSYTVLIRGLISEG 522
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+ EA L M + + + Y+ + F R
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYNKFAADFHR 555
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 183/451 (40%), Gaps = 54/451 (11%)
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
TYN+++S + + + +V + +M + L ET + ++ F ++A
Sbjct: 197 TYNSMMSILAKTRQ-------FETMVSVLEEMGTKGLLTMET-FTIAMKAFAAAKERKKA 248
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
VGI LM + ++ + ++ + K +GK ++ + L + P++ Y +L+
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAK-LGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 208 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL---KGEFSKVFHLQDEVIQKGF 264
C R L+EA ++ +M+ G+ P ++ ++E K + K+FH + K
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFH-----VMKSK 362
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
P P++ +Y +I C + A+E M + L PD Y+ +I+GF
Sbjct: 363 GP------CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 416
Query: 325 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 384
++L +EL EM +K P D T +L+K ++N E + K+
Sbjct: 417 KKLDTVYELLKEMQEKGH--PPDGKTYNALIKLMANQKM---------PEHGTRIYNKM- 464
Query: 385 YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNE 444
Q + P ++ +++ Y VA + ++D +I+K +
Sbjct: 465 IQNEIEPSIHTFNMIMKS----------------YFVARNYEM-GRAVWDEMIKKGICPD 507
Query: 445 FKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYK 504
S L++G G EA R + ML + + YN D GG ++ +
Sbjct: 508 DNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQ 567
Query: 505 EMLHYG--FVCHMFSVLALIKALYCDERYNE 533
G +F+ A + C +R+ E
Sbjct: 568 RAKFSGKFAAAEIFARWAQMTRRRCKQRFME 598
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/429 (18%), Positives = 162/429 (37%), Gaps = 67/429 (15%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIIS 171
++L H + V L + R FC AE+ G + + +Y+ ++S
Sbjct: 157 LDLSHDLIVEVLERFRHARKPAFRFFC-------------WAAERQGFAHASRTYNSMMS 203
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K ++ + + EM KG+ + + + ++ + +A +F+ M
Sbjct: 204 ILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELMKKYKFKI 262
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
G T + L+++ + L D++ ++ F+P+++TY L++G C +
Sbjct: 263 GVETINCLLDSLGRAKLGKEAQVLFDKLKER---------FTPNMMTYTVLLNGWCRVRN 313
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
EA I M + L PD V+++ ++ G R + A +L M K C
Sbjct: 314 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC-------- 365
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKAT 408
N +++ ++ D+C + E A++ + PD+ Y L+ G +
Sbjct: 366 -------PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ-- 416
Query: 409 SRFAKRLLLFYIVAHCLT----IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
K+L Y + + P Y+ LI+ AN + +
Sbjct: 417 ----KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK---------------MPEHG 457
Query: 465 ARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
R + M+ P +N+++ + + N ++ EM+ G S LI+
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 525 LYCDERYNE 533
L + + E
Sbjct: 518 LISEGKSRE 526
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 189/470 (40%), Gaps = 72/470 (15%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++ ++K L RI + +LQ M P+ V YNTL+ A C KN + R
Sbjct: 184 TYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALC---KNGKVG----RA 236
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
L +M PN+ T+ +I +C+ ++ +++ +L G P + ++++
Sbjct: 237 RSLMSEM----KEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEV 292
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
C + +ALE+ + KG DV A L++ C ++ A+ F EM +G P
Sbjct: 293 LCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPN 352
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
TY+ L+ YC G F + + T+N LI GL R
Sbjct: 353 VETYNLLIAGYCDVGMLDSALDT--------FNDMKTDAIRWNFATFNTLIRGLSIGGRT 404
Query: 293 DEALEILRGMPEMLLDPDEV------SYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 346
D+ L+IL EM+ D D V Y+ VI GF + A E L+M E +P
Sbjct: 405 DDGLKIL----EMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM---EKLFPR 457
Query: 347 DQDTNESLVK--DLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLH 404
D + L+ + D + + E + VS+CL +H
Sbjct: 458 AVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSII------------VSHCL----IH 501
Query: 405 KKAT-SRFAKRLLLFYIVAHCLTIPSYIIYD-ILIEKCANNEFKSVVELVKGFRMRGLVN 462
+ + + + L L + +P ++ ++I C ++ + ++ V+ RG V
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCV- 560
Query: 463 EAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
P+ YN L+ + C+ G++ KA+ ++ M+ V
Sbjct: 561 ---------------PDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/516 (19%), Positives = 196/516 (37%), Gaps = 104/516 (20%)
Query: 115 LYHQMCVRE-----------------LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK 157
L+H++CV L P++ + +IR F ++ + ++ L+++
Sbjct: 82 LFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKF 141
Query: 158 GLSPHADSYSRIISRFCKNKEMGKALEMKV-EMLDKGIFPDVHAYGLLIQLLCHQRRLLE 216
G+ P ++ I+ K +++ A E +M+ GI DV+ YG+L++ L R+ +
Sbjct: 142 GIKPSLKVFNSILDVLVK-EDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGD 200
Query: 217 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY--------- 267
L Q M G++P Y+TL+ A C G+ + L E+ + + +
Sbjct: 201 GFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCN 260
Query: 268 --------------YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 313
+ F P +VT ++ LC R EALE+L + D V+
Sbjct: 261 EQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVA 320
Query: 314 YSAVISGFRRIRELRKAFELKLEMDQK------ET----------CWPLDQ--DTNESLV 355
+ ++ G+ + ++R A +EM++K ET LD DT +
Sbjct: 321 CNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMK 380
Query: 356 KDL--SNHDTFSSLVNDYCAEDKAEMALKLR------------------------YQAQY 389
D N TF++L+ + + LK+ Y+
Sbjct: 381 TDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENR 440
Query: 390 LPDSVSYCLLLNGLHKKATSRFAKRLLLF-------YIVAHCLTIPSYIIYDILIEKCAN 442
D++ + L + L +A R K + L A+ I + I++ C
Sbjct: 441 WEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHC-- 498
Query: 443 NEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDM 502
L+ + G + E+ + M+ R Y P + +N +I C V
Sbjct: 499 --------LIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKF 550
Query: 503 YKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVI 538
++M G V S L++ L C + + +W++
Sbjct: 551 VEDMAERGCVPDTESYNPLLEEL-CVKGDIQKAWLL 585
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 44/320 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEK--------- 101
+V+ V++ LC EGR+ EA VL+ + D V NTL+ C K
Sbjct: 283 VVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFI 342
Query: 102 ------------NHNLSIP-YVRI------VELYHQMCVRELSPNETTYRCMIRLFCDRN 142
+NL I Y + ++ ++ M + N T+ +IR
Sbjct: 343 EMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Query: 143 RVEEAVGILRLMAEKGLSPHA--DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 200
R ++ + IL +M + A D Y+ +I F K ALE ++M + +FP
Sbjct: 403 RTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRAVD 460
Query: 201 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
+ LC + + + + + +M+ G P L+ Y G+ + L ++++
Sbjct: 461 RSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMV 520
Query: 261 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
+G+LP T+NA+I G C + ++ + M E PD SY+ ++
Sbjct: 521 TRGYLPRS--------STFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEE 572
Query: 321 FRRIRELRKAFELKLEMDQK 340
+++KA+ L M +K
Sbjct: 573 LCVKGDIQKAWLLFSRMVEK 592
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD--PDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
+N VI E R +A L +M P V + + + CE +L Y
Sbjct: 428 YNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAY------ 481
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
QM P+ C+I + ++EE++ ++ M +G P + +++ +I FCK
Sbjct: 482 -DQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCK 540
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
++ ++ +M ++G PD +Y L++ LC + + +A LF M+ + + P
Sbjct: 541 QDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSM 600
Query: 236 YDTLVEAYCL 245
+ +L+ +CL
Sbjct: 601 WSSLM--FCL 608
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 110/279 (39%), Gaps = 67/279 (24%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEA-------EKNH 103
+V+ N ++K C G++R A+ EM P+ TYN LI+ C+ + +
Sbjct: 318 VVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFN 377
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETT-----------------------YRCMIRLFCD 140
++ +R +R LS T Y C+I F
Sbjct: 378 DMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYK 437
Query: 141 RNRVEEAV------------------GILRLMAEKGLSPHADSYSRIIS----------- 171
NR E+A+ ++ L + G+ +Y ++I
Sbjct: 438 ENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSH 497
Query: 172 ----RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
R+ ++ ++ ++LE+ +M+ +G P + +I C Q +++ ++M R
Sbjct: 498 CLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAER 557
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
G P +Y+ L+E C+KG+ K + L +++K +P
Sbjct: 558 GCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVP 596
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 110/267 (41%), Gaps = 40/267 (14%)
Query: 271 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML-LDPDEVSYSAVISGFRRIRELRK 329
F S TY AL H LC F+R D ++L MP+ + L PD+ + +I GF R R +++
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 330 AFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED---KAEMALKLRYQ 386
+ +++ K P + F+S+++ ED E +
Sbjct: 131 VISV-VDLVSKFGIKP--------------SLKVFNSILDVLVKEDIDIAREFFTRKMMA 175
Query: 387 AQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFK 446
+ D +Y +L+ GL T+R L I+ P+ ++Y+ L+ N
Sbjct: 176 SGIHGDVYTYGILMKGL--SLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN--- 230
Query: 447 SVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
+ RAR +++ P +N+LI +C + ++ + ++
Sbjct: 231 ---------------GKVGRAR-SLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKC 274
Query: 507 LHYGFVCHMFSVLALIKALYCDERYNE 533
GFV + +V +++ L + R +E
Sbjct: 275 FSLGFVPDVVTVTKVMEVLCNEGRVSE 301
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 164/398 (41%), Gaps = 66/398 (16%)
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
I E+ M + E E Y MI C R A I+ +M KGL P SY+ II
Sbjct: 291 IFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIH 350
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML------ 225
CK+ +A ++ E + FP + Y LL++ LC + +AR++ + ML
Sbjct: 351 GLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGAD 410
Query: 226 --------LRGM---------------------SPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
LRG+ P T +T++ C G +
Sbjct: 411 RTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVL 470
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL-RGMPEMLLDPDEVSYS 315
D+++ F +P VT N ++ GL R +EAL++L R MPE + P V+Y+
Sbjct: 471 DDMMTGKFC-------APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYN 523
Query: 316 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 375
AVI G ++ + +A + ++++ ++ T++ +++ C +
Sbjct: 524 AVIRGLFKLHKGDEAMSVFGQLEKASVT---------------ADSTTYAIIIDGLCVTN 568
Query: 376 KAEMALKLRYQAQYLP----DSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYI 431
K +MA K + P D+ Y L GL + A L Y +A IP+ +
Sbjct: 569 KVDMAKKF-WDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFL--YDLADSGAIPNVV 625
Query: 432 IYDILIEKCANNEFK-SVVELVKGFRMRGLVNEAARAR 468
Y+ +I +C+ + K ++++ R G +A R
Sbjct: 626 CYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWR 663
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 185/475 (38%), Gaps = 63/475 (13%)
Query: 67 GEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSP 126
GE EAE + +TD + I + C +N + ++ RI++ +C+R P
Sbjct: 37 GEDDAIEAEDRRRSVTDR--AYWRRRIHSICAVRRNPDEAL---RILD---GLCLRGYRP 88
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM- 185
+ +I CD R +EA L G P + + II+R ++ L +
Sbjct: 89 DSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVI 148
Query: 186 -KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 244
++ K P + Y L+ LC R+++A L +M RG P T+ TL+ YC
Sbjct: 149 HRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYC 208
Query: 245 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
E EV K F V P+ +T + LI G + + ++++ + E
Sbjct: 209 EIREL--------EVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE 260
Query: 305 MLLDPDEVS-----YSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS 359
+ + + S ++ ++ R FE+ N SL + ++
Sbjct: 261 YMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIA---------------ENMSLCESVN 305
Query: 360 NHDTFSSLVNDYCAEDKAEMALKLRY--QAQYL-PDSVSYCLLLNGLHKKATSRFAKRLL 416
+ +++ C + A ++ Y +++ L P SY +++GL K A +LL
Sbjct: 306 VEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLL 365
Query: 417 LFYIVAHCLTIPSYIIYDILIE----KCANNEFKSVVEL-----------VKGFRMRGLV 461
+ PS Y +L+E + + ++V+EL + +RGL
Sbjct: 366 --EEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLC 423
Query: 462 -----NEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGF 511
E +ML + RP+ N +I C G V A + +M+ F
Sbjct: 424 VMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 92/224 (41%), Gaps = 21/224 (9%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAA-CEAEKNHNLSIPYV 110
+ N VI LC GR+ +A VL +M PD VT NT++ + L +
Sbjct: 449 TLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDV--- 505
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
L M ++ P Y +IR ++ +EA+ + + + ++ + +Y+ II
Sbjct: 506 ----LNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIII 561
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFP----DVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
C + ++M + D I+P D Y ++ LC L +A ++
Sbjct: 562 DGLCVTNK----VDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLAD 617
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 270
G P Y+T++ G + + + +E+ + G P VT
Sbjct: 618 SGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVT 661
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 21/273 (7%)
Query: 56 VSFNAVIKRLCGEGRIREA-ETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
++FN+++ +C G + EA + EMT+ D +YNTL+ A C K + + +
Sbjct: 340 ITFNSLLA-VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC---KGGQMDLAF- 394
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E+ QM V+ + PN +Y +I F R +EA+ + M G++ SY+ ++
Sbjct: 395 ---EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
S + K +AL++ EM GI DV Y L+ Q + E + +F EM +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY TL++ Y G + + + F + +V Y+ALI LC
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEI--------FREFKSAGLRADVVLYSALIDALCKNG 563
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
A+ ++ M + + P+ V+Y+++I F R
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGR 596
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 127/276 (46%), Gaps = 34/276 (12%)
Query: 55 LVSFNAVIKRLCGEG--RIREAETVLQEM----TDPDCVTYNTLISAAC------EAEKN 102
LV++NAVI CG+G ++ EM PD +T+N+L+ A C EA +N
Sbjct: 303 LVTYNAVID-ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARN 360
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
L+ +M R + + +Y ++ C +++ A IL M K + P+
Sbjct: 361 ------------LFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPN 408
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
SYS +I F K +AL + EM GI D +Y L+ + R EA D+ +
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILR 468
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 282
EM G+ TY+ L+ Y +G++ +V + E+ ++ L P+L+TY+ L
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL--------PNLLTYSTL 520
Query: 283 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 318
I G EA+EI R L D V YSA+I
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALI 556
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 153/362 (42%), Gaps = 46/362 (12%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK-EMGKALEMKVEM 189
+ +I + EEA+ + M E GL P+ +Y+ +I K E + + EM
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEA-RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 248
G+ PD + L+ + C + L EA R+LF EM R + +Y+TL++A C G+
Sbjct: 331 QRNGVQPDRITFNSLLAV-CSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 249 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 308
F + ++ K +P ++V+Y+ +I G R DEAL + M + +
Sbjct: 390 MDLAFEILAQMPVKRIMP--------NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 309 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLV 368
D VSY+ ++S + ++ +A ++ EM + + KD+ T+++L+
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREM------------ASVGIKKDVV---TYNALL 486
Query: 369 NDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCL 425
Y + K + K+ + + LP+ ++Y L++G K + A + + A
Sbjct: 487 GGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Query: 426 TIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNL 485
++Y LI+ N GLV A D M P YN
Sbjct: 547 A--DVVLYSALIDALCKN---------------GLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 486 LI 487
+I
Sbjct: 590 II 591
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 112/236 (47%), Gaps = 19/236 (8%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
E+ + S+N ++ +C G++ A +L +M P+ V+Y+T+I +A +
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR------ 424
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
+ + L+ +M ++ + +Y ++ ++ R EEA+ ILR MA G+ +Y+
Sbjct: 425 -FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYN 483
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
++ + K + + ++ EM + + P++ Y LI EA ++F+E
Sbjct: 484 ALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA 543
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
G+ Y L++A C G L DE+ ++G SP++VTYN++I
Sbjct: 544 GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG--------ISPNVVTYNSII 591
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 133/328 (40%), Gaps = 50/328 (15%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+VS++ VI GR EA + EM D V+YNTL+S + ++
Sbjct: 409 VVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE------- 461
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+++ +M + + TY ++ + + + +E + M + + P+ +YS +I
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ K +A+E+ E G+ DV Y LI LC + A L EM G+S
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGIS 581
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY+++++A+ S + G LP+ ++ S T + L F Q
Sbjct: 582 PNVVTYNSIIDAFGR----SATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQL-FGQ 636
Query: 291 RPDEA------------------LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA-- 330
E+ LE+ R M ++ + P+ V++SA+++ R A
Sbjct: 637 LTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 331 -------FELK-------LEMDQKETCW 344
F+ K L M Q+E W
Sbjct: 697 LLEELRLFDNKVYGVVHGLLMGQRENVW 724
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 134/326 (41%), Gaps = 57/326 (17%)
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G + KV + ++ F + + ++ ++ALI +EA+ + M E
Sbjct: 244 GRYGKV-----TIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 307 LDPDEVSYSAVISG-------FRRIREL------------RKAFELKLEMDQKETCWP-- 345
L P+ V+Y+AVI F+++ + R F L + + W
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 346 ---LDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLL 399
D+ TN + +D+ +++T L++ C + ++A ++ Q + +P+ VSY +
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNT---LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 400 LNGLHKKATSRFAKRLLLF----YI------VAHCLTIPSYI-------IYDILIEKCAN 442
++G K RF + L LF Y+ V++ + Y DIL E +
Sbjct: 416 IDGFAKAG--RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASV 473
Query: 443 NEFKSVV---ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKA 499
K VV L+ G+ +G +E + M + P Y+ LI + GG +A
Sbjct: 474 GIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
Query: 500 YDMYKEMLHYGFVCHMFSVLALIKAL 525
++++E G + ALI AL
Sbjct: 534 MEIFREFKSAGLRADVVLYSALIDAL 559
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 116/270 (42%), Gaps = 18/270 (6%)
Query: 53 KCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIP 108
+ + S+ A+I GR + +L M + P +TYNT+I+A +
Sbjct: 174 RSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG------GLD 227
Query: 109 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 168
+ ++ L+ +M + P+ TY ++ R +EA + R M + G+ P +YS
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 169 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
++ F K + + K ++ EM G PD+ +Y +L++ + EA +F +M G
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAG 347
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 288
+P TY L+ + G + V L FL ++ P TYN LI
Sbjct: 348 CTPNANTYSVLLNLFGQSGRYDDVRQL--------FLEMKSSNTDPDAATYNILIEVFGE 399
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVI 318
E + + M E ++PD +Y +I
Sbjct: 400 GGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 162/378 (42%), Gaps = 52/378 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++N ++ G EAE V + M D PD TY+ L+ + +
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRR-------LE 299
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++ +L +M P+ T+Y ++ + ++EA+G+ M G +P+A++YS ++
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ F ++ ++ +EM PD Y +LI++ E LF +M+ +
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 231 PGGRTYDTLVEAYCLKGEF-------------------SKVFHLQDEVIQK--------- 262
P TY+ ++ A C KG SK + E +
Sbjct: 420 PDMETYEGIIFA-CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALV 478
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
F + +PS+ T+++L++ E+ IL + + + + +++A I ++
Sbjct: 479 AFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 323 RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK 382
+ + +A + ++M +K C P D+ T E+++ S F+ LV D C E EM
Sbjct: 539 QGGKFEEAVKTYVDM-EKSRCDP-DERTLEAVLSVYS----FARLV-DECREQFEEMK-- 589
Query: 383 LRYQAQYLPDSVSYCLLL 400
+ LP + YC++L
Sbjct: 590 ---ASDILPSIMCYCMML 604
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 153/375 (40%), Gaps = 50/375 (13%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
+ + + F R + ++ + + M + P+ Y+ +IS + + K LE+ EM
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG-- 247
+G+ V +Y LI R + +L M +SP TY+T++ A C +G
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINA-CARGGL 226
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 307
++ + L E+ +G P +VTYN L+ DEA + R M + +
Sbjct: 227 DWEGLLGLFAEMRHEGI--------QPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 308 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSL 367
PD +YS ++ F ++R L K +L EM + L + +++ L
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS---------------LPDITSYNVL 323
Query: 368 VNDYCAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHC 424
+ Y + A+ + +Q Q P++ +Y +LLN + + R+ LF +
Sbjct: 324 LEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ--SGRYDDVRQLFLEMKSS 381
Query: 425 LTIPSYIIYDILIEKCANNE-FKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 483
T P Y+ILIE FK VV L M+ N P+ Y
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFH----------------DMVEENIEPDMETY 425
Query: 484 NLLIFDHCIGGNVHK 498
+IF C G +H+
Sbjct: 426 EGIIF-ACGKGGLHE 439
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 177/460 (38%), Gaps = 61/460 (13%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+ +I L EG + + V EM +Y LI+A + + Y +
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINA-------YGRNGRYETSL 196
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRV--EEAVGILRLMAEKGLSPHADSYSRIIS 171
EL +M ++SP+ TY +I C R + E +G+ M +G+ P +Y+ ++S
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 172 RFCKNKEMGKALEMKVE-MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
C + +G EM M D GI PD+ Y L++ RRL + DL EM G
Sbjct: 256 A-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P +Y+ L+EAY G + + F +P+ TY+ L++
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGV--------FHQMQAAGCTPNANTYSVLLNLFGQSG 366
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDT 350
R D+ ++ M DPD +Y+ +I F ++ L +M
Sbjct: 367 RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM------------V 414
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR 410
E++ D+ ++ + A L+ +P S +Y ++ + A
Sbjct: 415 EENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA--- 471
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEA----AR 466
L + + ++ + E +N ++ L+ F GLV E+ +R
Sbjct: 472 --------------LYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR 517
Query: 467 ARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
D+ + RN +N I + GG +A Y +M
Sbjct: 518 LVDSGIPRNRD----TFNAQIEAYKQGGKFEEAVKTYVDM 553
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 125/288 (43%), Gaps = 19/288 (6%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+N V+ G + +A Q M PD T+N LI+ C + K + +
Sbjct: 196 YNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSK-------FDLAL 248
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+L+ +M + PN ++ +IR F ++EE V + M E G + ++
Sbjct: 249 DLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGL 308
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
C+ + A + +++L+K + P YG L++ LC + + + A ++ +E+ +G +P
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
TLVE G K ++++ G L P VT+N L+ LC
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGIL--------PDSVTFNLLLRDLCSSDHST 420
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
+A + +PDE +Y ++SGF + ++ L EM K+
Sbjct: 421 DANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKD 468
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 38/307 (12%)
Query: 128 ETTYRCMIRLFCDRNRVEEAV----GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
E +R I +C +++ A+ + RL+ K P+ Y+ +++ + K+ +M KAL
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGK---PNVGVYNTVVNGYVKSGDMDKAL 213
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
M + PDV + +LI C + A DLF+EM +G P +++TL+ +
Sbjct: 214 RFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGF 273
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
G+ + + E+I+ G FS + T L+ GLC R D+A ++ +
Sbjct: 274 LSSGKIEEGVKMAYEMIELG------CRFSEA--TCEILVDGLCREGRVDDACGLVLDLL 325
Query: 304 EMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK--ETCWPLDQDTNESLVKD---- 357
+ P E Y +++ + +A E+ E+ +K C+ E L K
Sbjct: 326 NKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTE 385
Query: 358 --------------LSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLL 400
L + TF+ L+ D C+ D + A +LR A Y PD +Y +L+
Sbjct: 386 KASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLV 445
Query: 401 NGLHKKA 407
+G K+
Sbjct: 446 SGFTKEG 452
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 117/279 (41%), Gaps = 19/279 (6%)
Query: 47 GKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKN 102
GK + + +FN +I C + A + +EM +P+ V++NTLI + K
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK- 278
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
V++ ++M +E T ++ C RV++A G++ + K + P
Sbjct: 279 ------IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
Y ++ + C + +A+EM E+ KG P A L++ L R +A +
Sbjct: 333 EFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFME 392
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 282
+M+ G+ P T++ L+ C + L+ KG + P TY+ L
Sbjct: 393 KMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG--------YEPDETTYHVL 444
Query: 283 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
+ G R E ++ M + + PD +Y+ ++ G
Sbjct: 445 VSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 142/353 (40%), Gaps = 51/353 (14%)
Query: 205 IQLLCHQRRLLEARDLFQEM--LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
I C R++ A F M L+ G P Y+T+V Y G+ K + ++
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKE 222
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
P + T+N LI+G C + D AL++ R M E +P+ VS++ +I GF
Sbjct: 223 --------RAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFL 274
Query: 323 RIRELRKAFELKLEMDQ------KETCWPLDQ--------DTNESLVKDLSNHDT----- 363
++ + ++ EM + + TC L D LV DL N
Sbjct: 275 SSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEF 334
Query: 364 -FSSLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFY 419
+ SLV C E+KA A+++ ++ P ++ L+ GL K + A +
Sbjct: 335 DYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Query: 420 IVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPE 479
+ A L P + +++L+ +++ + +A R R + Y P+
Sbjct: 395 MNAGIL--PDSVTFNLLLRDLCSSDHST---------------DANRLRLLASSKGYEPD 437
Query: 480 GAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYN 532
Y++L+ G + + EML + +F+ L+ L C +++
Sbjct: 438 ETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFS 490
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 21/238 (8%)
Query: 19 IRGF-AAGKATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETV 77
IRGF ++GK E+G+ ++ G +AT E ++ LC EGR+ +A +
Sbjct: 270 IRGFLSSGK--IEEGVKMAYEMIELGCRFSEATCE-------ILVDGLCREGRVDDACGL 320
Query: 78 LQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRC 133
+ ++ + P Y +L+ C K VR +E+ ++ + +P
Sbjct: 321 VLDLLNKRVLPSEFDYGSLVEKLCGENK-------AVRAMEMMEELWKKGQTPCFIACTT 373
Query: 134 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 193
++ R E+A G + M G+ P + +++ ++ C + A +++ KG
Sbjct: 374 LVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKG 433
Query: 194 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 251
PD Y +L+ + R E L EML + M P TY+ L++ G+FS+
Sbjct: 434 YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSR 491
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 176/416 (42%), Gaps = 43/416 (10%)
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
++Y MC + PN T+ + +FC+ + E L M E+G P +Y+ ++S +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
C+ + +A + M + + PD+ Y LI+ LC R+ EA F M+ RG+ P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
+Y+TL+ AYC +G + L E++ S P T ++ G R
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLG--------NSVVPDRFTCKVIVEGFVREGRLL 393
Query: 294 EALEILRGMPEMLLD-PDEVSYSAVISGFRRIRELRKAFELKLEMDQ--KETCWPLDQDT 350
A+ + + + +D P EV ++S + + K F K +D+ +E +T
Sbjct: 394 SAVNFVVELRRLKVDIPFEVCDFLIVS----LCQEGKPFAAKHLLDRIIEEEGHEAKPET 449
Query: 351 NESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSR 410
+L++ LS D E+ + KL+ Q Q L D+ +Y L+ L + +R
Sbjct: 450 YNNLIESLSRCDAI---------EEALVLKGKLKNQNQVL-DAKTYRALIGCLCRIGRNR 499
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDT 470
A+ L+ + + S+I ++ C +F L+ F M
Sbjct: 500 EAESLMAEMFDSE-VKPDSFICGALVYGYCKELDFDKAERLLSLFAME------------ 546
Query: 471 MLHRNYRPEGAVYNLLIFDHC-IGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
R + PE YN L+ C G KA ++ + M GFV + + LI+ L
Sbjct: 547 --FRIFDPES--YNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 133/323 (41%), Gaps = 33/323 (10%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEM---TDPDCVTYNTLISAACEAEKNHN 104
+ T+ + +FN ++ LC G ++E E +L+ M PD T+N L C
Sbjct: 227 RVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPK- 285
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG---LSP 161
+ ++L +M P TY I FC V+EA + M KG +P
Sbjct: 286 ------KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAP 339
Query: 162 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 221
A +++ +I KN + + E+ M+ G PDV Y +I+ +C ++ EA
Sbjct: 340 TAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFL 399
Query: 222 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 281
EM +G P TY+ + C + + L +++ + +PS+ TYN
Sbjct: 400 DEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVE--------SRCAPSVQTYNM 451
Query: 282 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
LI PD A M + D +Y A+I+G + + +A KE
Sbjct: 452 LISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMING---LFDCHRA---------KE 499
Query: 342 TCWPLDQDTNESLVKDLSNHDTF 364
C+ L++ N+ L D+F
Sbjct: 500 ACFLLEEVVNKGLKLPYRVFDSF 522
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 17/201 (8%)
Query: 47 GKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKN 102
G A + +F +I L + E ++ M PD TY +I C AEK
Sbjct: 333 GSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEK- 391
Query: 103 HNLSIPYVRIVELYH---QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL 159
+ E Y +M + P+ TY C +R+ C+ + +EA+ + M E
Sbjct: 392 ---------VDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC 442
Query: 160 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 219
+P +Y+ +IS F + + A EM + DV Y +I L R EA
Sbjct: 443 APSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACF 502
Query: 220 LFQEMLLRGMSPGGRTYDTLV 240
L +E++ +G+ R +D+ +
Sbjct: 503 LLEEVVNKGLKLPYRVFDSFL 523
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 16/242 (6%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYV-RIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
P T+ L+S AC A + SI V R++ L M L P++ T +R C+
Sbjct: 120 PGRSTFLILLSHACRAPDS---SISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETG 173
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAY 201
RV+EA +++ + EK P +Y+ ++ CK K++ E EM D + PD+ ++
Sbjct: 174 RVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSF 233
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+LI +C+ + L EA L ++ G P Y+T+++ +C + S+ + ++ +
Sbjct: 234 TILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKE 293
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
+G P +TYN LI GL R +EA L+ M + +PD +Y+++++G
Sbjct: 294 EG--------VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM 345
Query: 322 RR 323
R
Sbjct: 346 CR 347
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+ + ++ LC GR+ EA+ +++E+T+ PD TYN L+ C+ + +L + Y
Sbjct: 160 VTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCK---DLHVVYEF 216
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ E+ V+ P+ ++ +I C+ + EA+ ++ + G P Y+ I+
Sbjct: 217 VDEMRDDFDVK---PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
FC + +A+ + +M ++G+ PD Y LI L R+ EAR + M+ G P
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 232 GGRTYDTLVEAYCLKG 247
TY +L+ C KG
Sbjct: 334 DTATYTSLMNGMCRKG 349
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 19/219 (8%)
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 248
M++ G+ PD + ++ LC R+ EA+DL +E+ + P TY+ L++ C +
Sbjct: 150 MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKD 209
Query: 249 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 308
V+ DE ++ F P LV++ LI +C + EA+ ++ +
Sbjct: 210 LHVVYEFVDE-MRDDF------DVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 309 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLV 368
PD Y+ ++ GF + + +A + +M KE DQ T +L+ LS
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKM--KEEGVEPDQITYNTLIFGLSKAGRV---- 316
Query: 369 NDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKA 407
++A M LK A Y PD+ +Y L+NG+ +K
Sbjct: 317 ------EEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
LVSF +I +C +REA ++ ++ + PDC YNT++ C K
Sbjct: 230 LVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS------- 282
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
V +Y +M + P++ TY +I RVEEA L+ M + G P +Y+ ++
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 171 SRFCK 175
+ C+
Sbjct: 343 NGMCR 347
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 112/238 (47%), Gaps = 20/238 (8%)
Query: 72 REAETVLQEM-----TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSP 126
+EA+ V EM +PD TYN +I CE+ + +M + + P
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGS-------ASSSYSIVAEMERKGIKP 220
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 186
N +++ MI F ++ +E +L +M ++G++ +Y+ I CK K+ +A +
Sbjct: 221 NSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALL 280
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
ML G+ P+ Y LI C++ EA+ LF+ M+ RG P Y TL+ C
Sbjct: 281 DGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKG 340
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
G+F L E ++K ++P SFS +L++GL + +EA E++ + E
Sbjct: 341 GDFETALSLCKESMEKNWVP----SFS----IMKSLVNGLAKDSKVEEAKELIGQVKE 390
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/477 (22%), Positives = 186/477 (38%), Gaps = 73/477 (15%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNHNLSI 107
E V++NA+++ G EA +VL+EM + C VTYN L++A A S
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRA----GFSK 368
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
++E+ M + + PN TY +I + + +EA+ + M E G P+ +Y+
Sbjct: 369 EAAGVIEM---MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
++S K + ++M +M G P+ + ++ L ++ +F+EM
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G P T++TL+ AY G + E+ + G F+ + TYNAL++ L
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAG--------FNACVTTYNALLNALA 537
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVIS---------GFRRIRELRKAFELKLEMD 338
++ M P E SYS ++ G RI E +++
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI-------ENRIKEG 590
Query: 339 QKETCWPL---------------DQDTNESLVK------DLSNHDTFSSLVNDYCAEDKA 377
Q W L + +L K D+ ++ S+ D+A
Sbjct: 591 QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQA 650
Query: 378 EMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILI 437
E L+ + PD V+Y L++ ++ A+ +L + P + Y+ +I
Sbjct: 651 EGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL--KTLEKSQLKPDLVSYNTVI 708
Query: 438 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGG 494
KGF RGL+ EA R M R RP YN + + G
Sbjct: 709 ---------------KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMG 750
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 44/286 (15%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNH 103
+A C+ ++NA++ L +G R E V+ +M P +Y+ ++ C A+ +
Sbjct: 519 RAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQ--CYAKGGN 576
Query: 104 NLSIPYV--RIVE---LYHQMCVREL-------------------------SPNETTYRC 133
L I + RI E M +R L P+ +
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNS 636
Query: 134 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 193
M+ +F N ++A GIL + E GLSP +Y+ ++ + + E KA E+ +
Sbjct: 637 MLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
Query: 194 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 253
+ PD+ +Y +I+ C + + EA + EM RG+ P TY+T V Y G F+++
Sbjct: 697 LKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI- 755
Query: 254 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 299
++VI+ P+ +T+ ++ G C + EA++ +
Sbjct: 756 ---EDVIE----CMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 147/360 (40%), Gaps = 63/360 (17%)
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG-EFSKVFHL 255
DV AY ++ + +A DLF+ M G SP TY+ +++ + G + K+ +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 256 QDEVIQKG---------------------------FLPYYVTSFSPSLVTYNALIHGLCF 288
DE+ KG F + P VTYNAL+
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 348
EAL +L+ M E D V+Y+ +++ + R ++A + +EM K+ P
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGV-IEMMTKKGVMP--- 384
Query: 349 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRY---QAQYLPDSVSYCLLLNGLHK 405
N T++++++ Y K + ALKL Y +A +P++ +Y +L+ L K
Sbjct: 385 -----------NAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 406 KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAA 465
K+ S ++L C P+ ++ ++ C N KG M VN
Sbjct: 434 KSRSNEMIKMLCDMKSNGC--SPNRATWNTMLALCGN----------KG--MDKFVNRVF 479
Query: 466 RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
R M + P+ +N LI + G+ A MY EM GF + + AL+ AL
Sbjct: 480 RE---MKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE--LSPNETTYRCMIRLFCDR 141
PD V +N+++S +N+ I+E +RE LSP+ TY ++ ++ R
Sbjct: 629 PDMVIFNSMLSIFTR----NNMYDQAEGILE-----SIREDGLSPDLVTYNSLMDMYVRR 679
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
+A IL+ + + L P SY+ +I FC+ M +A+ M EM ++GI P + Y
Sbjct: 680 GECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+ E D+ + M P T+ +V+ YC G++S+ ++
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI-- 797
Query: 262 KGFLP 266
K F P
Sbjct: 798 KTFDP 802
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 145/358 (40%), Gaps = 43/358 (12%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D Y T++ A K Y + ++L+ +M SP TY ++ +F R
Sbjct: 209 DVRAYTTILHAYSRTGK-------YEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRS 261
Query: 145 EEAV-GILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
+ G+L M KGL + S ++S + + +A E E+ G P Y
Sbjct: 262 WRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNA 321
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L+Q+ EA + +EM TY+ LV AY G + + + + +KG
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+ P+ +TY +I + DEAL++ M E P+ +Y+AV+S +
Sbjct: 382 VM--------PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGK 433
Query: 324 IRELRKAFELKLEMDQKETCWP----------------LDQDTNESLVKDLS-----NHD 362
+ ++ +M + C P +D+ N + S + D
Sbjct: 434 KSRSNEMIKMLCDM-KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRD 492
Query: 363 TFSSLVNDY--CAE--DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLL 416
TF++L++ Y C D ++M ++ +A + +Y LLN L +K R + ++
Sbjct: 493 TFNTLISAYGRCGSEVDASKMYGEMT-RAGFNACVTTYNALLNALARKGDWRSGENVI 549
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 130/303 (42%), Gaps = 30/303 (9%)
Query: 87 VTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE 146
+T NTLI + +++ + + +Y + + PNE T R MI++ C R++E
Sbjct: 200 ITLNTLIHYSSKSKIDD-------LVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKE 252
Query: 147 AVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 206
V +L + K P + ++ R + + +++ + +L K + D Y +++
Sbjct: 253 VVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVY 312
Query: 207 LLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
+ L+ AR +F EML RG S Y V C KG+ + L E+ + G P
Sbjct: 313 AKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSP 372
Query: 267 YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 326
Y T+N LI G F ++ LE M L P +++ ++ +I
Sbjct: 373 YD--------ETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 327 LRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ 386
+ +A E+ L + ++ V D T+S L+ + + + ALKL Y+
Sbjct: 425 VNRANEI------------LTKSIDKGFVPD---EHTYSHLIRGFIEGNDIDQALKLFYE 469
Query: 387 AQY 389
+Y
Sbjct: 470 MEY 472
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 134/293 (45%), Gaps = 22/293 (7%)
Query: 52 EKCLVSF---NAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHN 104
++CL S +++ R+ E RI E+ ++L+ + D + Y+ ++ A K +
Sbjct: 263 KRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKA---KEGD 319
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
L V +++ +M R S N Y +R+ C++ V+EA +L M E G+SP+ +
Sbjct: 320 L----VSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDE 375
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
+++ +I F + K LE M+ +G+ P A+ +++ + + A ++ +
Sbjct: 376 TFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKS 435
Query: 225 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 284
+ +G P TY L+ + + + L F SP + +LI
Sbjct: 436 IDKGFVPDEHTYSHLIRGFIEGNDIDQALKL--------FYEMEYRKMSPGFEVFRSLIV 487
Query: 285 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
GLC + + + L+ M + L++P+ Y A+I F++I + A + EM
Sbjct: 488 GLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 112/268 (41%), Gaps = 26/268 (9%)
Query: 1 MKLLLRVSFTVATLKTFRIRGFAAGKATTEKGLVSPPNV----LIPGFAAGKATTEKCLV 56
+K LL + V T+ + I +A K E LVS V L GF+A
Sbjct: 292 LKRLLMKNMVVDTI-GYSIVVYAKAK---EGDLVSARKVFDEMLQRGFSANSFV------ 341
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+ ++ C +G ++EAE +L EM + P T+N LI +
Sbjct: 342 -YTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEE-------KG 393
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+E M R L P+ + + M++ V A IL +KG P +YS +I
Sbjct: 394 LEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRG 453
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
F + ++ +AL++ EM + + P + LI LC ++ + M R + P
Sbjct: 454 FIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPN 513
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
YD L++A+ G+ + + +E+I
Sbjct: 514 ADIYDALIKAFQKIGDKTNADRVYNEMI 541
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 22/290 (7%)
Query: 55 LVSFNAVIK-RLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEKNHNLSIP 108
L+SFN +I RL G L +M PD +TYNTL+SA C + N + +
Sbjct: 260 LISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSA-CSRDSNLDGA-- 316
Query: 109 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 168
V+++ M P+ TY MI ++ EA + + KG P A +Y+
Sbjct: 317 ----VKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNS 372
Query: 169 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML-LR 227
++ F + + K E+ +M G D Y +I + Q +L A L+++M L
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G +P TY L+++ + L E++ G P+L TY+ALI G
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGI--------KPTLQTYSALICGYA 484
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
+ +EA + M PD ++YS ++ R E RKA+ L +M
Sbjct: 485 KAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 129/285 (45%), Gaps = 18/285 (6%)
Query: 44 FAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEA 99
F + T + +NA++ G+ +A+ ++ M PD +++NTLI+A ++
Sbjct: 214 FTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKS 273
Query: 100 EK-NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKG 158
NL+ VEL + L P+ TY ++ + ++ AV + M
Sbjct: 274 GGLTPNLA------VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR 327
Query: 159 LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEAR 218
P +Y+ +IS + + +A + +E+ KG FPD Y L+ +R + +
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 219 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 278
+++Q+M G TY+T++ Y +G+ L ++ KG ++ +P +T
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM--KG-----LSGRNPDAIT 440
Query: 279 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
Y LI L R EA ++ M ++ + P +YSA+I G+ +
Sbjct: 441 YTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 170/407 (41%), Gaps = 34/407 (8%)
Query: 54 CLVSFNAVIKRLCGEGRIREAETVL----QEMTDPDCVTYNTLISAACEAEKNHNLSIPY 109
C + +I+ + ++AE+V+ Q PD T+N+L+SA + Y
Sbjct: 751 CSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG-------CY 803
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
R +++ M SP + ++ C R+EE ++ + + G S +
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
+ F + + + ++ M G P + Y ++I+LLC +R+ +A + EM
Sbjct: 864 LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
++++++ Y ++ K + + + G P TYN LI C
Sbjct: 924 KVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETG--------LEPDETTYNTLIIMYCRD 975
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQD 349
+RP+E +++ M + LDP +Y ++IS F + + L +A +L E+ K
Sbjct: 976 RRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSK--------- 1026
Query: 350 TNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATS 409
L D S + T + D ++ KAE L++ A P + LL+
Sbjct: 1027 ---GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 410 RFAKRLL--LFYIVAHCLTIP-SYIIYDILIEKCANNEFKSVVELVK 453
+ A+++L L T+P S +I L K N+ + ++E+ K
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKK 1130
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 171/434 (39%), Gaps = 85/434 (19%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
Y M+ ++ + +A ++ M ++G P S++ +I+ + K G + VE+L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN--ARLKSGGLTPNLAVELL 285
Query: 191 D----KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
D G+ PD Y L+ L A +F++M P TY+ ++ Y
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G ++ L E+ KGF P VTYN+L++ + ++ E+ + M +M
Sbjct: 346 GLAAEAERLFMELELKGFFP--------DAVTYNSLLYAFARERNTEKVKEVYQQMQKMG 397
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 366
DE++Y+ +I + + +L A +L +M K LS +
Sbjct: 398 FGKDEMTYNTIIHMYGKQGQLDLALQLYKDM------------------KGLSGRN---- 435
Query: 367 LVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLT 426
PD+++Y +L++ L K A R T
Sbjct: 436 ------------------------PDAITYTVLIDSLGK------ANR-----------T 454
Query: 427 IPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLL 486
+ + + +++ ++ L+ G+ G EA ML +P+ Y+++
Sbjct: 455 VEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVM 514
Query: 487 IFDHCIGGNVHKAYDMYKEMLHYG----FVCHMFSVLALIKALYCDERYNEMSWVIRNTL 542
+ G KA+ +Y++M+ G + + +L L+K + R +++ IR+
Sbjct: 515 LDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK----ENRSDDIQKTIRDME 570
Query: 543 RSCNLNDSEQLKIL 556
C +N E +L
Sbjct: 571 ELCGMNPLEISSVL 584
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 130/325 (40%), Gaps = 49/325 (15%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEA-EKNHNLSIPYVRIVEL 115
S N ++ LC +GR+ E V++E+ D + I +A + N+ + ++
Sbjct: 824 SINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI----FEVKKI 879
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEA---------------------------- 147
Y M P YR MI L C RV +A
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 148 -------VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 200
V + + + E GL P +Y+ +I +C+++ + + +M + G+ P +
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 201 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
Y LI Q+ L +A LF+E+L +G+ Y T+++ G SK L +
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 261 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
G P+L T + L+ P EA ++L + + ++ + YS+VI
Sbjct: 1060 NAG--------IEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDA 1111
Query: 321 FRRIRELRKAFELKLEMDQKETCWP 345
+ R ++ E LEM +KE P
Sbjct: 1112 YLRSKDYNSGIERLLEM-KKEGLEP 1135
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 90/219 (41%), Gaps = 33/219 (15%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLS---- 106
L ++NA+I G EAE + E+ PD VTYN+L+ A +
Sbjct: 332 LWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQ 391
Query: 107 -----------IPYVRIVELYHQMCVRELS--------------PNETTYRCMIRLFCDR 141
+ Y I+ +Y + +L+ P+ TY +I
Sbjct: 392 QMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKA 451
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
NR EA ++ M + G+ P +YS +I + K + +A + ML G PD AY
Sbjct: 452 NRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAY 511
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 240
+++ +L +A L+++M+ G +P Y+ ++
Sbjct: 512 SVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMI 550
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 22/297 (7%)
Query: 45 AAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAE 100
A G + LVS +I L GR EAE + +E+ P YN L+
Sbjct: 297 ATGLSAKTATLVS---IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL------- 346
Query: 101 KNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS 160
K + + P + +M R +SP+E TY +I + + R E A +L+ M +
Sbjct: 347 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 406
Query: 161 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 220
P++ +SR+++ F E K ++ EM G+ PD Y ++I L A
Sbjct: 407 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 466
Query: 221 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 280
F ML G+ P T++TL++ +C G + + + ++G L P TYN
Sbjct: 467 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCL--------PCATTYN 518
Query: 281 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
+I+ +R D+ +L M + P+ V+++ ++ + + A E EM
Sbjct: 519 IMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEM 575
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 136/339 (40%), Gaps = 73/339 (21%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++NA++K G +++AE+++ EM PD TY+ LI A A + + RI
Sbjct: 341 AYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES-----ARI 395
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
V +M ++ PN + ++ F DR ++ +L+ M G+ P Y+ +I
Sbjct: 396 V--LKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
F K + A+ ML +GI PD + LI C R + A ++F+ M RG P
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 513
Query: 233 GRTYD-----------------------------------TLVEAYCLKGEFSKVFHLQD 257
TY+ TLV+ Y G F+ +
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 573
Query: 258 EV-------------------IQKGFLPYYVTSF--------SPSLVTYNALIHGLCFFQ 290
E+ Q+G V +F PSL+ N+LI+ +
Sbjct: 574 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 329
R EA +L+ M E + PD V+Y+ ++ R+ + +K
Sbjct: 634 RDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 102/491 (20%), Positives = 192/491 (39%), Gaps = 52/491 (10%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+++NA+I I +A ++ +M D V Y+ +I + + K I V
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNK-----IDSVM 252
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
++ LY ++ +L + +I F +A+ +L + GLS + IIS
Sbjct: 253 LLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIIS 312
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ +A + E+ GI P AY L++ L +A + EM RG+SP
Sbjct: 313 ALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSP 372
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY L++AY G + + E ++ G P+ ++ L+ G
Sbjct: 373 DEHTYSLLIDAYVNAGRWESARIVLKE-MEAG-------DVQPNSFVFSRLLAGFRDRGE 424
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
+ ++L+ M + + PD Y+ VI F + L A D+ +
Sbjct: 425 WQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMT------------TFDRMLS 472
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKAT 408
E + D T+++L++ +C + AE + + LP + +Y +++N +
Sbjct: 473 EGIEPD---RVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 409 SRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARAR 468
KRLL L P+ + + L++ + G N+A
Sbjct: 530 WDDMKRLLGKMKSQGIL--PNVVTHTTLVDVYGKS---------------GRFNDAIECL 572
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCD 528
+ M +P +YN LI + G +A + ++ M G + ++ +LI A D
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGED 632
Query: 529 ERYNEMSWVIR 539
R E V++
Sbjct: 633 RRDAEAFAVLQ 643
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 11/215 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVR 111
V++N +I C GR AE + + M C+ TYN +I++ + E+ ++
Sbjct: 480 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK----- 534
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
L +M + + PN T+ ++ ++ R +A+ L M GL P + Y+ +I+
Sbjct: 535 --RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 592
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ + +A+ M G+ P + A LI RR EA + Q M G+ P
Sbjct: 593 AYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKP 652
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
TY TL++A +F KV + +E+I G P
Sbjct: 653 DVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKP 687
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 105/221 (47%), Gaps = 12/221 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
L+++NA++ LC G + + QEM + PD ++ I A C+A H+
Sbjct: 243 LLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHS------ 296
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++ +M +L PN T+ +I+ C +V++A +L M +KG +P +Y+ I+
Sbjct: 297 -AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIM 355
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ C + E+ +A ++ M PD H Y ++++LL R A ++++ M R
Sbjct: 356 AYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 231 PGGRTYDTLVEAYCL-KGEFSKVFHLQDEVIQKGFLPYYVT 270
P TY ++ KG+ + + +I +G PY T
Sbjct: 416 PTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT 456
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 25/263 (9%)
Query: 67 GEGRIREAE---TVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVRIVELYHQM 119
G RIR+A V EM + +CV YN L+ A C K+ ++ Y +++ +M
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALC---KSGDVDGGY----KMFQEM 269
Query: 120 CVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEM 179
L P+ ++ I +CD V A +L M L P+ +++ II CKN+++
Sbjct: 270 GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKV 329
Query: 180 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 239
A + EM+ KG PD Y ++ C + A L M P TY+ +
Sbjct: 330 DDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMV 389
Query: 240 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 299
++ G F + + + + ++ F P++ TY +IHGL R LE
Sbjct: 390 LKLLIRIGRFDRATEIWEGMSER--------KFYPTVATYTVMIHGLV---RKKGKLEEA 438
Query: 300 RGMPEMLLDPDEVSYSAVISGFR 322
EM++D YS + R
Sbjct: 439 CRYFEMMIDEGIPPYSTTVEMLR 461
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 123/304 (40%), Gaps = 39/304 (12%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
+ + R + N EA M E G+ P D +++ C K + A E +
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 249
GI P Y +L++ R AR +F EML R Y+ L++A C G+
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 250 SKVFHLQDEVIQKGFLP--YYVTSF-------------------------SPSLVTYNAL 282
+ + E+ G P Y F P++ T+N +
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHI 319
Query: 283 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 342
I LC ++ D+A +L M + +PD +Y+++++ E+ +A +L MD+ +
Sbjct: 320 IKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTK- 378
Query: 343 CWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNG 402
C P D+ T ++K L F D+A + + ++ P +Y ++++G
Sbjct: 379 CLP-DRHTYNMVLKLLIRIGRF----------DRATEIWEGMSERKFYPTVATYTVMIHG 427
Query: 403 LHKK 406
L +K
Sbjct: 428 LVRK 431
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 24/161 (14%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACE-AEKNHNLSIPYVR 111
+FN +IK LC ++ +A +L EM +PD TYN++++ C+ E N R
Sbjct: 315 TFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN--------R 366
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+L +M + P+ TY +++L R + A I M+E+ P +Y+ +I
Sbjct: 367 ATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 426
Query: 172 RFCKNK----EMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 208
+ K E + EM M+D+GI P Y +++L
Sbjct: 427 GLVRKKGKLEEACRYFEM---MIDEGIPP----YSTTVEML 460
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 11/218 (5%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDPDCVT----YNTLISAACEAEKNHNLSIPYVRI 112
S+ ++++ LCG G+ EA +L ++ + VT YNT+ SA + ++ I
Sbjct: 409 SYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQ-------ISHI 461
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+L+ +M SP+ TY +I F V+EA+ I + P SY+ +I+
Sbjct: 462 HDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINC 521
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
KN ++ +A EM +KG+ PDV Y L++ R+ A LF+EML++G P
Sbjct: 522 LGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPN 581
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 270
TY+ L++ G ++ L ++ Q+G P +T
Sbjct: 582 IVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSIT 619
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 169/414 (40%), Gaps = 67/414 (16%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D YN L+ A + EK +++ M R +E TY MIR +
Sbjct: 237 DIFAYNMLLDALAKDEK----------ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKC 286
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
+EAVG+ M +GL+ + Y+ ++ K K + KA+++ M++ G P+ + Y LL
Sbjct: 287 DEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLL 346
Query: 205 IQLLCHQRRLL--------------------------------EARDLFQEMLLRGMSPG 232
+ LL + +L+ EA LF +M +
Sbjct: 347 LNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGE 406
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
+Y +++E+ C G+ + + ++ +KG + + YN + L ++
Sbjct: 407 RDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVV--------TDTMMYNTVFSALGKLKQI 458
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
++ M + PD +Y+ +I+ F R+ E+ +A + E+++ + C P
Sbjct: 459 SHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD-CKP------- 510
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFA 412
D+ ++++ + + D+A + K + PD V+Y L+ K A
Sbjct: 511 ----DIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMA 566
Query: 413 KRLLLFYIVAHCLTIPSYIIYDILIEKC--ANNEFKSVVELVKGFRMRGLVNEA 464
L +V C P+ + Y+IL++ C N V+L + +GL ++
Sbjct: 567 YSLFEEMLVKGCQ--PNIVTYNILLD-CLEKNGRTAEAVDLYSKMKQQGLTPDS 617
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 124/278 (44%), Gaps = 25/278 (8%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
++ +++ L G + EA + +M + +Y +++ + C A K + +
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT-------IEAI 427
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E+ ++ + + + Y + ++ + M + G SP +Y+ +I+ F
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+ E+ +A+ + E+ PD+ +Y LI L + EA F+EM +G++P
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV 547
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
TY TL+E + + L +E++ KG P++VTYN L+ L R
Sbjct: 548 VTYSTLMECFGKTERVEMAYSLFEEMLVKGC--------QPNIVTYNILLDCLEKNGRTA 599
Query: 294 EALEILRGMPEMLLDPDEVSYS------AVISGFRRIR 325
EA+++ M + L PD ++Y+ +V G RIR
Sbjct: 600 EAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIR 637
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+ ++N +I G + EA + +E+ PD ++YN+LI+ KN ++ +V
Sbjct: 477 IFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG---KNGDVDEAHV 533
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
R + +M + L+P+ TY ++ F RVE A + M KG P+ +Y+ ++
Sbjct: 534 R----FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILL 589
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
KN +A+++ +M +G+ PD Y +L +L
Sbjct: 590 DCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERL 626
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 161/379 (42%), Gaps = 54/379 (14%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVR 111
V V LC + A + +++M + C +YN++I + +L+
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLA----S 533
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+V + ++ + P+ TY ++ C +N + A I+ M E GL P YS II
Sbjct: 534 LVNIIQEL---DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIG 590
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K + +A E +ML+ GI PD AY ++I R+ EA +L +E++ + P
Sbjct: 591 SLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRP 650
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
TY L+ + G K D++++ G SP++V Y ALI F ++
Sbjct: 651 SSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG--------LSPNVVLYTALIGH--FLKK 700
Query: 292 PD--EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ- 348
D + + M E + D ++Y ++SG R +K ++ +E +++ L +
Sbjct: 701 GDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRT 760
Query: 349 ------------------------DTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMAL 381
+S++ +L H+T ++ YCA D+A L
Sbjct: 761 KPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNT---IITGYCAAGRLDEAYNHL 817
Query: 382 KLRYQAQYLPDSVSYCLLL 400
+ + +P+ V+Y +L+
Sbjct: 818 ESMQKEGIVPNLVTYTILM 836
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 59 NAVIKRLCGEGRIREA----ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
N +I C GR+ EA E++ +E P+ VTY L+ + EA + ++
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIES-------AID 850
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
L+ P++ Y +++ CD R +A+ ++ M + G++P+ DSY +++ C
Sbjct: 851 LFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLC 907
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
++ +A+++ +M I+P + LI +LC +++L EAR LF M+ G S
Sbjct: 908 YSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRS 963
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/331 (20%), Positives = 129/331 (38%), Gaps = 60/331 (18%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+++ +I GRI EA +++E+ P TY LIS + +
Sbjct: 618 IAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMME-------K 670
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY----- 166
+ +M LSPN Y +I F + + + + LM E + +Y
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS 730
Query: 167 --------------------SRIISRFCKNKEM-----------GKALEMKV-EMLDKGI 194
+++ R + K + K+ M+V + K I
Sbjct: 731 GLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSI 790
Query: 195 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 254
P+++ + +I C RL EA + + M G+ P TY L++++ G+
Sbjct: 791 IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAID 850
Query: 255 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 314
L + T+ P V Y+ L+ GLC F+RP +AL ++ M + ++P++ SY
Sbjct: 851 L-----------FEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSY 899
Query: 315 SAVISGFRRIRELRKAFELKLEMDQKETCWP 345
++ R +A ++ +M + WP
Sbjct: 900 EKLLQCLCYSRLTMEAVKVVKDMAALDI-WP 929
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 169/421 (40%), Gaps = 23/421 (5%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
Y+ + FC R EA + M G Y+ ++ +CK+ M A+ + + M+
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
++ D + LI L + R +F +M+ +G+ TY ++ +YC +G
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP--DEALEILRGMPEMLLD 308
+ L+ V G S ++ Y LI G F+++ D+A+++L M + +
Sbjct: 360 --YALRLFVNNTG-----SEDISRNVHCYTNLIFG--FYKKGGMDKAVDLLMRMLDNGIV 410
Query: 309 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDT-FSSL 367
PD ++Y F ++ L K ELK M ++ N ++ DL N + SL
Sbjct: 411 PDHITY------FVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESL 464
Query: 368 VNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTI 427
+ + +D A+ L L +Y L+ + K + V CL
Sbjct: 465 LGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQ 524
Query: 428 PSYI-----IYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAV 482
+ I + +I+ E + + + +V + + A D M RP A+
Sbjct: 525 ENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAI 584
Query: 483 YNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTL 542
Y+ +I G V +A + + +ML G + + +I + R +E + ++ +
Sbjct: 585 YSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Query: 543 R 543
+
Sbjct: 645 K 645
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 16/183 (8%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQ---MCVRELSPNETTYRCMIRLFCD 140
P+ +NT+I+ C A R+ E Y+ M + PN TY +++ +
Sbjct: 792 PNLYLHNTIITGYCAAG----------RLDEAYNHLESMQKEGIVPNLVTYTILMKSHIE 841
Query: 141 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 200
+E A+ L P YS ++ C K AL + +EM GI P+ +
Sbjct: 842 AGDIESAID---LFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDS 898
Query: 201 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
Y L+Q LC+ R +EA + ++M + P + L+ C + + + L ++
Sbjct: 899 YEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMV 958
Query: 261 QKG 263
Q G
Sbjct: 959 QSG 961
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 49 ATTEKCLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHN 104
A E + FN +I L GR+ EA +++ + P VTYN+L+ C+A
Sbjct: 314 AEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPG 373
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
S ++ M R + P TTY + F N+ EE + + + E G SP
Sbjct: 374 AS-------KILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRL 426
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
+Y I+ C++ ++ A+++ EM ++GI PD+ +LI LLC L EA + F
Sbjct: 427 TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNA 486
Query: 225 LLRGMSPGGRTYDTLVEAYCLKG 247
+ RG+ P T+ + KG
Sbjct: 487 VRRGIIPQYITFKMIDNGLRSKG 509
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 32/245 (13%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAAC---------------- 97
FN ++ ++++AE + +EM P VTY TLI C
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 98 --EAEKNHNLSIPYV-------RIVE---LYHQMCVRELSPNETTYRCMIRLFCDRNRVE 145
E E N + P + R+ E + + V E P TY +++ FC +
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 146 EAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLI 205
A IL++M +G+ P +Y+ F K+ + + + + ++++ G PD Y L++
Sbjct: 373 GASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLIL 432
Query: 206 QLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFL 265
++LC +L A + +EM RG+ P T L+ C + F D +++G +
Sbjct: 433 KMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGII 492
Query: 266 PYYVT 270
P Y+T
Sbjct: 493 PQYIT 497
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 125/292 (42%), Gaps = 24/292 (8%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD-------PDCVTYNTLISAACEAE 100
K+ TE L+ ++ LC EG +REA L+ + P +N L++ +
Sbjct: 207 KSATELRLLE--VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSR 264
Query: 101 KNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLS 160
K + +L+ +M + P TY +I +C RV+ A+ +L M +
Sbjct: 265 K-------LKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEME 317
Query: 161 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 220
+ ++ II + + +AL M P + Y L++ C L A +
Sbjct: 318 INFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKI 377
Query: 221 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 280
+ M+ RG+ P TY+ + + + + +L ++I+ G SP +TY+
Sbjct: 378 LKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGH--------SPDRLTYH 429
Query: 281 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFE 332
++ LC + A+++ + M +DPD ++ + +I R+ L +AFE
Sbjct: 430 LILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFE 481
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 121/315 (38%), Gaps = 54/315 (17%)
Query: 169 IISRFCKN---KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
++ CK +E LE +D P V + +L+ R+L +A L++EM
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 226 LRGMSPGGRTYDTLVEAYC-------------------LKGEFSKVFHLQDEVIQKGFLP 266
+ P TY TL+E YC ++ F + D + + G L
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 267 --------YYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 318
++V P++VTYN+L+ C A +IL+ M +DP +Y+
Sbjct: 338 EALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFF 397
Query: 319 SGFRRIREL------------------RKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
F + + R + L L+M ++ L N+ + +
Sbjct: 398 KYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGID 457
Query: 361 HD--TFSSLVNDYCAEDKAEMALKLRYQA---QYLPDSVSYCLLLNGLHKKATSRFAKRL 415
D T + L++ C + E A + A +P +++ ++ NGL K S AKRL
Sbjct: 458 PDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Query: 416 -LLFYIVAHCLTIPS 429
L + H +P+
Sbjct: 518 SSLMSSLPHSKKLPN 532
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 139/318 (43%), Gaps = 35/318 (11%)
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+++ +M R+ NE TY ++ + ++V+EAVG+ E G+ ++ ++
Sbjct: 164 QVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWL 223
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
C+ K + A E + D+ A +++ C + EA+ +++++ P
Sbjct: 224 CRYKHVEFA-ETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDV 282
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
+Y T++ A KG+ K L + + T +P + N +I LCF +R
Sbjct: 283 VSYGTMINALTKKGKLGKAMEL--------YRAMWDTRRNPDVKICNNVIDALCFKKRIP 334
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK-ETCWPLDQDTNE 352
EALE+ R + E DP+ V+Y++++ +IR K +EL EM+ K +C P D
Sbjct: 335 EALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSP--NDVTF 392
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMA-----LKLRYQAQY------------------ 389
S + S +V + A++K EM L R Q+
Sbjct: 393 SYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGL 452
Query: 390 LPDSVSYCLLLNGLHKKA 407
PD +Y + ++GLH K
Sbjct: 453 GPDQRTYTIRIHGLHTKG 470
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
N VI LC + RI EA V +E++ DP+ VTYN+L+ C+ + ++ E
Sbjct: 321 NNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTE-------KVWE 373
Query: 115 LYHQMCVR--ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
L +M ++ SPN+ T+ +++ R ++ +L MA+ +D Y+ +
Sbjct: 374 LVEEMELKGGSCSPNDVTFSYLLKY---SQRSKDVDIVLERMAKNKCEMTSDLYNLMFRL 430
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ + + K E+ EM G+ PD Y + I L + ++ EA FQEM+ +GM P
Sbjct: 431 YVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
Query: 233 GRT 235
RT
Sbjct: 491 PRT 493
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 45/248 (18%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+ N ++ C G + EA+ +++ PD V+Y T+I+A + K +
Sbjct: 249 AMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGK-------LGKA 301
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ELY M +P+ +I C + R+ EA+ + R ++EKG P+ +Y+ ++
Sbjct: 302 MELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKH 361
Query: 173 FCKNKEMGKALEMKVEMLDKG--------IFP----------DVHA-------------- 200
CK + K E+ EM KG F DV
Sbjct: 362 LCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTS 421
Query: 201 --YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 258
Y L+ +L + + R+++ EM G+ P RTY + KG+ + E
Sbjct: 422 DLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQE 481
Query: 259 VIQKGFLP 266
++ KG +P
Sbjct: 482 MMSKGMVP 489
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 21/250 (8%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++ ++ R ++ EA V + D D V ++ L+ C + +V
Sbjct: 180 TYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYK--------HVEF 231
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
E RE + ++ +C V EA + + P SY +I+
Sbjct: 232 AETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINA 291
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
K ++GKA+E+ M D PDV +I LC ++R+ EA ++F+E+ +G P
Sbjct: 292 LTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPN 351
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
TY++L++ C KV+ L +E+ KG S SP+ VT++ L L + QR
Sbjct: 352 VVTYNSLLKHLCKIRRTEKVWELVEEMELKG------GSCSPNDVTFSYL---LKYSQRS 402
Query: 293 DEALEILRGM 302
+ +L M
Sbjct: 403 KDVDIVLERM 412
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 30/281 (10%)
Query: 55 LVSFNAVIK---RLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
LV+ N V K R G G EA + + + + + N L+ C+ ++ +
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR-----V 206
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
R+V L + ++PN T+ I +C NRVEEA+ ++ M G P SY+
Sbjct: 207 EQARVVLLQLK---SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYT 263
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
II +C+ E K EM EM G P+ Y ++ L Q+ EA + M
Sbjct: 264 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 228 GMSPGGRTYDTLVEAYCLKG---EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 284
G P Y+ L+ G E +VF ++ +P S + S TYN++I
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVE--------MPELGVSINTS--TYNSMIA 373
Query: 285 GLCFFQRPDEALEILRGMPEM-LLDPDEVSYSAVI-SGFRR 323
C D+A+E+L+ M L +PD +Y ++ S F+R
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 49/230 (21%)
Query: 54 CLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPY 109
C++S+ +I+ C + + +L EM + P+ +TY T++S+ N +
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSL-------NAQKEF 310
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRL-MAEKGLSPHADSYSR 168
+ + +M P+ Y C+I R+EEA + R+ M E G+S + +Y+
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNS 370
Query: 169 IISRFCKNKEMGKALEMKVEMLDKGI-FPDVHAY-------------------------- 201
+I+ +C + E KA+E+ EM + PDVH Y
Sbjct: 371 MIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Query: 202 ----------GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
LIQ LC A LF+EM+ + ++P RT L+E
Sbjct: 431 HHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 30/281 (10%)
Query: 55 LVSFNAVIK---RLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
LV+ N V K R G G EA + + + + + N L+ C+ ++ +
Sbjct: 152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKR-----V 206
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
R+V L + ++PN T+ I +C NRVEEA+ ++ M G P SY+
Sbjct: 207 EQARVVLLQLK---SHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYT 263
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
II +C+ E K EM EM G P+ Y ++ L Q+ EA + M
Sbjct: 264 TIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRS 323
Query: 228 GMSPGGRTYDTLVEAYCLKG---EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 284
G P Y+ L+ G E +VF ++ +P S + S TYN++I
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVE--------MPELGVSINTS--TYNSMIA 373
Query: 285 GLCFFQRPDEALEILRGMPEM-LLDPDEVSYSAVI-SGFRR 323
C D+A+E+L+ M L +PD +Y ++ S F+R
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 414
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 49/230 (21%)
Query: 54 CLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPY 109
C++S+ +I+ C + + +L EM + P+ +TY T++S+ N +
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSL-------NAQKEF 310
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRL-MAEKGLSPHADSYSR 168
+ + +M P+ Y C+I R+EEA + R+ M E G+S + +Y+
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNS 370
Query: 169 IISRFCKNKEMGKALEMKVEMLDKGI-FPDVHAY-------------------------- 201
+I+ +C + E KA+E+ EM + PDVH Y
Sbjct: 371 MIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTK 430
Query: 202 ----------GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
LIQ LC A LF+EM+ + ++P RT L+E
Sbjct: 431 HHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLE 480
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 13/212 (6%)
Query: 58 FNAVIKRLCGEGRIREAETV---LQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
FNA+++ LC E + +A V L+ PD T+N L+S +E+
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFE------- 235
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
+M + L P+ TY +I ++C +E+A ++ M E+ +P +Y+ +I
Sbjct: 236 ---EMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLG 292
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
+ KA E+ EM + G +PDV AY I+ C RRL +A L EM+ +G+SP
Sbjct: 293 LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNAT 352
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
TY+ L + + + L ++ LP
Sbjct: 353 TYNLFFRVLSLANDLGRSWELYVRMLGNECLP 384
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
PD VTYN+LI C K+ + Y +L +M E +P+ TY +I +
Sbjct: 244 PDVVTYNSLIDVYC---KDREIEKAY----KLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
++A +L+ M E G P +Y+ I FC + +G A ++ EM+ KG+ P+ Y L
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
++L L + +L+ ML P ++ L++ + + L ++++ KG
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 264 FLPY 267
F Y
Sbjct: 417 FGSY 420
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 11/178 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+V++N++I C + I +A ++ +M + PD +TY T+I L
Sbjct: 246 VVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGL-------GLIGQPD 298
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ E+ +M P+ Y IR FC R+ +A ++ M +KGLSP+A +Y+
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
++G++ E+ V ML P+ + LI++ ++ A L+++M+++G
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 12/175 (6%)
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
++ ++ C+ K M A + L PD+ + +L L + EA F+EM
Sbjct: 183 FNALLRTLCQEKSMTDARNV-YHSLKHQFQPDLQTFNIL---LSGWKSSEEAEAFFEEMK 238
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
+G+ P TY++L++ YC E K + L D++ ++ +P ++TY +I G
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREE--------EETPDVITYTTVIGG 290
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
L +PD+A E+L+ M E PD +Y+A I F R L A +L EM +K
Sbjct: 291 LGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 93/218 (42%), Gaps = 13/218 (5%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
+ ++R C + +A + + + P +++ ++S + K +A EM
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
KG+ PDV Y LI + C R + +A L +M +P TY T++ L G+
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPD 298
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 310
K + E+ + G P + YNA I C +R +A +++ M + L P+
Sbjct: 299 KAREVLKEMKEYGCYP--------DVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPN 350
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 348
+Y+ +L +++EL + M E C P Q
Sbjct: 351 ATTYNLFFRVLSLANDLGRSWELYVRMLGNE-CLPNTQ 387
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 160/367 (43%), Gaps = 44/367 (11%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+N +I+ + +A + EM PD TY+ LI+A H + + +
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINA-------HGRAGQWRWAM 198
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
L M ++P+ +TY +I EA+ + + M + G+ P +++ ++S +
Sbjct: 199 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 258
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS--P 231
++ KAL M + PD + ++I L + +A DLF M + P
Sbjct: 259 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 318
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
T+ +++ Y +KGE + + ++ +G P++V+YNAL+
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG--------LKPNIVSYNALMGAYAVHGM 370
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
AL +L + + + PD VSY+ +++ + R R+ KA E+ L M +KE P
Sbjct: 371 SGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM-RKERRKP------ 423
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQY---LPDSVSYCLLLNGLHKKAT 408
N T+++L++ Y + A+++ Q + P+ VS C LL A
Sbjct: 424 --------NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL-----AAC 470
Query: 409 SRFAKRL 415
SR K++
Sbjct: 471 SRSKKKV 477
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 177/427 (41%), Gaps = 83/427 (19%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++N +I G REA V ++MTD PD VT+N ++SA ++ + ++ ++ Y +
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSA-YKSGRQYSKALSYFEL 273
Query: 113 -----------------------------VELYHQMCVR--ELSPNETTYRCMIRLFCDR 141
++L++ M + E P+ T+ ++ L+ +
Sbjct: 274 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 333
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
+E + M +GL P+ SY+ ++ + + G AL + ++ GI PDV +Y
Sbjct: 334 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
L+ R+ +A+++F M P TY+ L++AY G ++ + ++ Q
Sbjct: 394 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 453
Query: 262 KGFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDE 294
G P V+ + + YN+ I ++
Sbjct: 454 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 513
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
A+ + + M + + D V+++ +ISG R+ + +A EM +D + L
Sbjct: 514 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM----------EDLSIPL 563
Query: 355 VKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRF 411
K++ +SS++ Y + + A + Q + PD ++Y +L+ + A+ ++
Sbjct: 564 TKEV-----YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN--ASEKW 616
Query: 412 AKRLLLF 418
K LF
Sbjct: 617 GKACELF 623
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 161/404 (39%), Gaps = 56/404 (13%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
Y MIRL N V++A G+ M + P A++Y +I+ + + A+ + +ML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
I P Y LI EA ++ ++M G+ P T++ ++ AY ++S
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD-- 308
K + + KG P T+N +I+ L + +AL++ M E +
Sbjct: 266 KALSYFE--LMKG------AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 317
Query: 309 PDEVSYSAVISGFR---RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
PD V++++++ + I R FE + K N +++
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK------------------PNIVSYN 359
Query: 366 SLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
+L+ Y + AL + Q +PD VSY LLN + AK +F ++
Sbjct: 360 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE--VFLMMR 417
Query: 423 HCLTIPSYIIYDILIEKCANNEF-KSVVELVKGFRMRG----------LVNEAARAR--- 468
P+ + Y+ LI+ +N F VE+ + G L+ +R++
Sbjct: 418 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 477
Query: 469 --DTML----HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
DT+L R A YN I + + KA +Y+ M
Sbjct: 478 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 521
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 115/264 (43%), Gaps = 17/264 (6%)
Query: 79 QEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLF 138
+E P+ VTYN LI A + + VE++ QM + PN + C +
Sbjct: 418 KERRKPNVVTYNALIDA-------YGSNGFLAEAVEIFRQMEQDGIKPNVVSV-CTLLAA 469
Query: 139 CDRNRVEEAVG-ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 197
C R++ + V +L +G++ + +Y+ I + E+ KA+ + M K + D
Sbjct: 470 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 529
Query: 198 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 257
+ +LI C + EA +EM + Y +++ AY +G+ ++ + +
Sbjct: 530 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 589
Query: 258 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 317
++ G P ++ Y +++H ++ +A E+ M ++PD ++ SA+
Sbjct: 590 QMKMAGC--------EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 641
Query: 318 ISGFRRIRELRKAFELKLEMDQKE 341
+ F + + F L M +KE
Sbjct: 642 MRAFNKGGQPSNVFVLMDLMREKE 665
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI--- 107
+V++NA+I G + EA + ++M P+ V+ TL++A ++K N+
Sbjct: 425 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 484
Query: 108 -------------------PYVRIVEL------YHQMCVRELSPNETTYRCMIRLFCDRN 142
Y+ EL Y M +++ + T+ +I C +
Sbjct: 485 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 544
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
+ EA+ L+ M + + + YS ++ + K ++ +A + +M G PDV AY
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 604
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
++ + +A +LF EM G+ P L+ A+ G+ S VF L D + +K
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 160/367 (43%), Gaps = 44/367 (11%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+N +I+ + +A + EM PD TY+ LI+A H + + +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINA-------HGRAGQWRWAM 66
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
L M ++P+ +TY +I EA+ + + M + G+ P +++ ++S +
Sbjct: 67 NLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY 126
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS--P 231
++ KAL M + PD + ++I L + +A DLF M + P
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 186
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
T+ +++ Y +KGE + + ++ +G P++V+YNAL+
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG--------LKPNIVSYNALMGAYAVHGM 238
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTN 351
AL +L + + + PD VSY+ +++ + R R+ KA E+ L M +KE P
Sbjct: 239 SGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM-RKERRKP------ 291
Query: 352 ESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKAT 408
N T+++L++ Y + A+++ Q + P+ VS C LL A
Sbjct: 292 --------NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLL-----AAC 338
Query: 409 SRFAKRL 415
SR K++
Sbjct: 339 SRSKKKV 345
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 177/427 (41%), Gaps = 83/427 (19%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++N +I G REA V ++MTD PD VT+N ++SA ++ + ++ ++ Y +
Sbjct: 83 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAY-KSGRQYSKALSYFEL 141
Query: 113 -----------------------------VELYHQMCVR--ELSPNETTYRCMIRLFCDR 141
++L++ M + E P+ T+ ++ L+ +
Sbjct: 142 MKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVK 201
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
+E + M +GL P+ SY+ ++ + + G AL + ++ GI PDV +Y
Sbjct: 202 GEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 261
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
L+ R+ +A+++F M P TY+ L++AY G ++ + ++ Q
Sbjct: 262 TCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQ 321
Query: 262 KGFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDE 294
G P V+ + + YN+ I ++
Sbjct: 322 DGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 381
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
A+ + + M + + D V+++ +ISG R+ + +A EM +D + L
Sbjct: 382 AIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM----------EDLSIPL 431
Query: 355 VKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRF 411
K++ +SS++ Y + + A + Q + PD ++Y +L+ + A+ ++
Sbjct: 432 TKEV-----YSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN--ASEKW 484
Query: 412 AKRLLLF 418
K LF
Sbjct: 485 GKACELF 491
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 161/404 (39%), Gaps = 56/404 (13%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
Y MIRL N V++A G+ M + P A++Y +I+ + + A+ + +ML
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
I P Y LI EA ++ ++M G+ P T++ ++ AY ++S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD-- 308
K + + KG P T+N +I+ L + +AL++ M E +
Sbjct: 134 KALSYFE--LMKG------AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
Query: 309 PDEVSYSAVISGFR---RIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
PD V++++++ + I R FE + K N +++
Sbjct: 186 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLK------------------PNIVSYN 227
Query: 366 SLVNDYCAEDKAEMALKLR---YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
+L+ Y + AL + Q +PD VSY LLN + AK +F ++
Sbjct: 228 ALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE--VFLMMR 285
Query: 423 HCLTIPSYIIYDILIEKCANNEF-KSVVELVKGFRMRG----------LVNEAARAR--- 468
P+ + Y+ LI+ +N F VE+ + G L+ +R++
Sbjct: 286 KERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV 345
Query: 469 --DTML----HRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM 506
DT+L R A YN I + + KA +Y+ M
Sbjct: 346 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM 389
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 115/264 (43%), Gaps = 17/264 (6%)
Query: 79 QEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLF 138
+E P+ VTYN LI A + + VE++ QM + PN + C +
Sbjct: 286 KERRKPNVVTYNALIDA-------YGSNGFLAEAVEIFRQMEQDGIKPNVVSV-CTLLAA 337
Query: 139 CDRNRVEEAVG-ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD 197
C R++ + V +L +G++ + +Y+ I + E+ KA+ + M K + D
Sbjct: 338 CSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKAD 397
Query: 198 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 257
+ +LI C + EA +EM + Y +++ AY +G+ ++ + +
Sbjct: 398 SVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFN 457
Query: 258 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 317
++ G P ++ Y +++H ++ +A E+ M ++PD ++ SA+
Sbjct: 458 QMKMAGC--------EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSAL 509
Query: 318 ISGFRRIRELRKAFELKLEMDQKE 341
+ F + + F L M +KE
Sbjct: 510 MRAFNKGGQPSNVFVLMDLMREKE 533
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI--- 107
+V++NA+I G + EA + ++M P+ V+ TL++A ++K N+
Sbjct: 293 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLS 352
Query: 108 -------------------PYVRIVEL------YHQMCVRELSPNETTYRCMIRLFCDRN 142
Y+ EL Y M +++ + T+ +I C +
Sbjct: 353 AAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMS 412
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
+ EA+ L+ M + + + YS ++ + K ++ +A + +M G PDV AY
Sbjct: 413 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 472
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
++ + +A +LF EM G+ P L+ A+ G+ S VF L D + +K
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 164/402 (40%), Gaps = 48/402 (11%)
Query: 134 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 193
++ + +R R EA + + +AE G P SY+ +++ K+ G + E+ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 194 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 253
D + +I + +A +M G++P TY+TL++ Y + G+ +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 254 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 313
L D ++++G + P++ T+N L+ C ++ +EA E+++ M E + PD V+
Sbjct: 171 ELLDLMLEEGNV-----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 314 YSAVISGF-RRIRELRKAFELKLEMDQKETCWPLDQDTN--------ESLVKD------- 357
Y+ + + + ++ +R E+ +M KE P + E V+D
Sbjct: 226 YNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRR 285
Query: 358 ------LSNHDTFSSLVNDYCA---EDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKAT 408
+N F+SL+N + D + L L + D ++Y ++N +
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWS--SA 343
Query: 409 SRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARAR 468
K +F + P Y I L KG+ +A
Sbjct: 344 GYMEKAAQVFKEMVKAGVKPDAHAYSI---------------LAKGYVRAKEPKKAEELL 388
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYG 510
+T++ + RP ++ +I C G++ A ++ +M +G
Sbjct: 389 ETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG 429
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 127/282 (45%), Gaps = 20/282 (7%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+FN +++ C + ++ EA V+++M + PD VTYNT+ A C +K +
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI--ATCYVQKGETVRAES--- 244
Query: 113 VELYHQMCVRELS-PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
E+ +M ++E + PN T ++ +C RV + + +R M E + + ++ +I+
Sbjct: 245 -EVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN 303
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
F + + E+ M + + DV Y ++ + +A +F+EM+ G+ P
Sbjct: 304 GFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKP 363
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR 291
Y L + Y E K L L + P++V + +I G C
Sbjct: 364 DAHAYSILAKGYVRAKEPKKAEEL---------LETLIVESRPNVVIFTTVISGWCSNGS 414
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
D+A+ + M + + P+ ++ ++ G+ +++ KA E+
Sbjct: 415 MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 456
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/337 (19%), Positives = 148/337 (43%), Gaps = 44/337 (13%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
FNAVI G + +A L +M +P TYNTLI A K S ++
Sbjct: 118 FNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS----ELL 173
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+L + ++ PN T+ +++ +C + +VEEA +++ M E G+ P +Y+ I + +
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233
Query: 174 CKNKEMGKALEMKVE--MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ E +A VE ++ + P+ G+++ C + R+ + + M +
Sbjct: 234 VQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT-----SFSPSLVTYNALIHGL 286
+++L+ + EV+ + + +T + ++TY+ +++
Sbjct: 294 NLVVFNSLINGFV-------------EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAW 340
Query: 287 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 346
++A ++ + M + + PD +YS + G+ R +E +KA EL +
Sbjct: 341 SSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL--------- 391
Query: 347 DQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
+V+ N F+++++ +C+ + A+++
Sbjct: 392 -------IVESRPNVVIFTTVISGWCSNGSMDDAMRV 421
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 139/303 (45%), Gaps = 18/303 (5%)
Query: 43 GFAAGKATTEKCLVSFNAVIKRLCGEGRIREAET-VLQEMTDPDCVTYNTLISAACEAEK 101
G++A +E+ +V V K+L E +L ++ PD Y TL+ K
Sbjct: 373 GYSARDEVSEEGVVD---VFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYM---K 426
Query: 102 NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSP 161
N ++ R++E + R P+E TY ++ F + ++ A +L MA G+
Sbjct: 427 NGRVA-DTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPA 485
Query: 162 HADSYSRIISRFCKNKEMGKALEMKVEML-DKGIFPDVHAYGLLIQLLCHQRRLLEARDL 220
+ +Y+ ++ +CK ++ +A ++ EM D GI PDV +Y ++I A
Sbjct: 486 NRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAF 545
Query: 221 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 280
F EM RG++P +Y TL++A+ + G+ + DE++ + L+ +N
Sbjct: 546 FNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKV-------DLIAWN 598
Query: 281 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
L+ G C ++A ++ M E P+ +Y ++ +G + R+ A L E+ K
Sbjct: 599 MLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI--K 656
Query: 341 ETC 343
E C
Sbjct: 657 ERC 659
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 107/482 (22%), Positives = 182/482 (37%), Gaps = 71/482 (14%)
Query: 45 AAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHN 104
A+G E+ + F A+ +R+ R + L + PD +N +++A
Sbjct: 200 ASGDDGPEESIKLFIAITRRVK-----RFGDQSLVGQSRPDTAAFNAVLNACANLGDTD- 253
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
+ +L+ +M + P+ TY MI+L R E V +L + +KG+
Sbjct: 254 ------KYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMT 307
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
+ +++ + ++ A + M +K + LC R A DL ++
Sbjct: 308 TMHSLVAAYVGFGDLRTAERIVQAMREKR------------RDLCKVLRECNAEDLKEKE 355
Query: 225 LLRGMSPGGRTYDTLVEAYCLKGEFSK-----VFH--LQDEVIQKGFLPYYVTSFSPSLV 277
D Y + E S+ VF L + V G P F+P
Sbjct: 356 EEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSR 415
Query: 278 TYNALIHGLCFFQR-PDEA--LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELK 334
Y L+ G R D A LE +R + PDEV+Y+ V+S F + +A ++
Sbjct: 416 IYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVL 475
Query: 335 LEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALK-LRYQAQYL 390
EM + +N T++ L+ YC + D+AE L+ + A
Sbjct: 476 AEMARMGVP---------------ANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIE 520
Query: 391 PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVE 450
PD VSY ++++G S A L F + P+ I Y
Sbjct: 521 PDVVSYNIIIDGCILIDDS--AGALAFFNEMRTRGIAPTKISY---------------TT 563
Query: 451 LVKGFRMRGLVNEAARARDTMLHR-NYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHY 509
L+K F M G A R D M++ + + +N+L+ +C G + A + M
Sbjct: 564 LMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKEN 623
Query: 510 GF 511
GF
Sbjct: 624 GF 625
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
P TY MI FC ++RV++A +L MA KG SP ++S +I+ +CK K + +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
EM +GI + Y LI C L A+DL EM+ G++P T+ ++ C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 246 KGEFSKVF------------HLQDE 258
K E K F HL+DE
Sbjct: 128 KKELRKAFAILEDLQKSEDHHLEDE 152
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 248
ML IFP Y +I C Q R+ +A+ + M +G SP T+ TL+ YC
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 249 FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLD 308
+ E+ ++G + + VTY LIHG C D A ++L M +
Sbjct: 61 VDNGMEIFCEMHRRGIVA--------NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Query: 309 PDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
PD +++ +++G +ELRKAF + ++ + E
Sbjct: 113 PDYITFHCMLAGLCSKKELRKAFAILEDLQKSE 145
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 154 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 213
M + P +Y+ +I FCK + A M M KG PDV + LI C +R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 214 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 273
+ ++F EM RG+ TY TL+ +C G+ L +E+I G P Y
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY----- 115
Query: 274 PSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
+T++ ++ GLC + +A IL + +
Sbjct: 116 ---ITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+++N++I C + R+ +A+ +L M PD VT++TLI+ C+A++ N
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG------ 64
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+E++ +M R + N TY +I FC ++ A +L M G++P ++ +++
Sbjct: 65 -MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 123
Query: 172 RFCKNKEMGKALEM 185
C KE+ KA +
Sbjct: 124 GLCSKKELRKAFAI 137
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P +TYN++I C+ ++ + + M + SP+ T+ +I +C R
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAK-------RMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
V+ + I M +G+ + +Y+ +I FC+ ++ A ++ EM+ G+ PD +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 204 LIQLLCHQRRLLEARDLFQEM 224
++ LC ++ L +A + +++
Sbjct: 121 MLAGLCSKKELRKAFAILEDL 141
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 271 SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 330
S P+ +TYN++I G C R D+A +L M PD V++S +I+G+ + + +
Sbjct: 5 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 331 FELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAE---DKAEMALKLRYQA 387
E+ EM ++ ++N T+++L++ +C D A+ L
Sbjct: 65 MEIFCEMHRRGI---------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 109
Query: 388 QYLPDSVSYCLLLNGLHKKATSRFAKRLL 416
PD +++ +L GL K R A +L
Sbjct: 110 GVAPDYITFHCMLAGLCSKKELRKAFAIL 138
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 22/266 (8%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNH 103
K E + S+ +++ E + + V +EM D PD V Y +I+A C+A+K
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKK-- 282
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
Y + +++M R P+ + +I ++ +A+ G A
Sbjct: 283 -----YEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEA 337
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
+Y+ ++ +C ++ M A + EM KG+ P+ Y +++ L +R EA +++Q
Sbjct: 338 PTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQT 397
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M P TY+ +V +C K + DE+ KG LP + +++LI
Sbjct: 398 M---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLP--------GMHMFSSLI 446
Query: 284 HGLCFFQRPDEALEILRGMPEMLLDP 309
LC + DEA E M ++ + P
Sbjct: 447 TALCHENKLDEACEYFNEMLDVGIRP 472
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 22/284 (7%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
FN ++ L + +A+ V +M +PD +Y L+ + + +R+
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ-------ELNLLRVD 252
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E+ +M P+ Y +I C + EEA+ M ++ P + +I+
Sbjct: 253 EVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGL 312
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
K++ ALE G + Y L+ C +R+ +A EM L+G+ P
Sbjct: 313 GSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNA 372
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
RTYD ++ + ++ + SK + + Y S P++ TY ++ C +R D
Sbjct: 373 RTYDIILH-HLIRMQRSK----------EAYEVYQTMSCEPTVSTYEIMVRMFCNKERLD 421
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
A++I M + P +S++I+ +L +A E EM
Sbjct: 422 MAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
TYN L+ A C +++ + Y + E M ++ + PN TY ++ R +EA
Sbjct: 339 TYNALVGAYCWSQR---MEDAYKTVDE----MRLKGVGPNARTYDIILHHLIRMQRSKEA 391
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
+ + M+ P +Y ++ FC + + A+++ EM KG+ P +H + LI
Sbjct: 392 YEVYQTMS---CEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Query: 208 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 255
LCH+ +L EA + F EML G+ P G + L + +G KV L
Sbjct: 449 LCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDL 496
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 135/323 (41%), Gaps = 53/323 (16%)
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
YN LI + + ++ + I L M ++L ET + + R + +V+EA
Sbjct: 130 NYNALIESLGKIKQ-------FKLIWSLVDDMKAKKLLSKET-FALISRRYARARKVKEA 181
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
+G M E G + ++R++ K++ +G A ++ +M K PD+ +Y +L++
Sbjct: 182 IGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 241
Query: 208 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 267
+ LL ++ +EM G P Y ++ A+C ++ + +E+ Q+ P
Sbjct: 242 WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPS 301
Query: 268 ---------------------------YVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 300
+ F TYNAL+ C+ QR ++A + +
Sbjct: 302 PHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVD 361
Query: 301 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
M + P+ +Y ++ R++ ++A+E+ M +C P
Sbjct: 362 EMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM----SCEP--------------T 403
Query: 361 HDTFSSLVNDYCAEDKAEMALKL 383
T+ +V +C +++ +MA+K+
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKI 426
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 14/172 (8%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++NA++ C R+ +A + EM P+ TY+ ++ H+L I R
Sbjct: 339 TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL---------HHL-IRMQRS 388
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
E Y P +TY M+R+FC++ R++ A+ I M KG+ P +S +I+
Sbjct: 389 KEAYEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITA 448
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
C ++ +A E EMLD GI P H + L Q L + R + DL +M
Sbjct: 449 LCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKM 500
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 90/203 (44%), Gaps = 13/203 (6%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT------DPDCVTYNTLISAACEAEKNHNLSIPYV 110
++N +I LC G ++A +L +M PD TY LIS+ C
Sbjct: 202 AYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIR 261
Query: 111 RIV----ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 166
R + ++ +M R P+ TY C+I C NR+ A+ + M KG P+ +Y
Sbjct: 262 RRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTY 321
Query: 167 SRIISRFCKNKEMGKALEMKVEM--LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
+ I + E+ A+EM M L G+ P Y LI L RR EARDL EM
Sbjct: 322 NSFIRYYSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 225 LLRGMSPGGRTYDTLVEAYCLKG 247
+ G+ P TY + +A +G
Sbjct: 381 VEAGLVPREYTYKLVCDALSSEG 403
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 20/215 (9%)
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL--SPHADSYSRIISRF 173
+++M P+ Y +I C ++A +L M G P +Y+ +IS +
Sbjct: 188 FYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSY 247
Query: 174 CK-----------NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
C+ + M +A M EML +G PDV Y LI C R+ A +LF+
Sbjct: 248 CRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFE 307
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNAL 282
+M +G P TY++ + Y + E + + + G P TY L
Sbjct: 308 DMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG-------HGVPGSSTYTPL 360
Query: 283 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 317
IH L +R EA +++ M E L P E +Y V
Sbjct: 361 IHALVETRRAAEARDLVVEMVEAGLVPREYTYKLV 395
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 196 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM--SPGGRTYDTLVEAYCLKGEFS--- 250
PDV+AY +I LC +AR L +M L G P TY L+ +YC G +
Sbjct: 198 PDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCR 257
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 310
K + + F F P +VTYN LI G C R ALE+ M P+
Sbjct: 258 KAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPN 317
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQ 339
+V+Y++ I + E+ A E+ M +
Sbjct: 318 QVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 110/266 (41%), Gaps = 30/266 (11%)
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L++ L + + EA F M P Y+T++ A C G F K L D++ G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFF-----------QRPDEALEILRGMPEMLLDPDEV 312
F + P TY LI C + +R EA + R M PD V
Sbjct: 231 F------RYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVV 284
Query: 313 SYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYC 372
+Y+ +I G + + +A EL +M K C P +Q T S ++ + S+ N+
Sbjct: 285 TYNCLIDGCCKTNRIGRALELFEDMKTK-GCVP-NQVTYNSFIR-------YYSVTNE-- 333
Query: 373 AEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYII 432
E EM ++ +P S +Y L++ L + + A+ L++ + A +P
Sbjct: 334 IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGL--VPREYT 391
Query: 433 YDILIEKCANNEFKSVVELVKGFRMR 458
Y ++ + ++ S ++ RMR
Sbjct: 392 YKLVCDALSSEGLASTLDEELHKRMR 417
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 121 VRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSYSRIISRFCKNKEM 179
+ ++ PN TT+ M+ F E I R M E+ G SP+ SY+ ++ +C M
Sbjct: 238 IGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLM 297
Query: 180 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 239
+A ++ EM +G+ D+ AY +I LC +++A++LF++M L+G+ TY+ L
Sbjct: 298 SEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHL 357
Query: 240 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC---FFQRPDEAL 296
V YC G+ + E+ +KG F +T AL+ GLC QR EA
Sbjct: 358 VNGYCKAGDVDSGLVVYREMKRKG--------FEADGLTIEALVEGLCDDRDGQRVVEAA 409
Query: 297 EILR-GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+I++ + E + P Y ++ ++ +A ++ EM K
Sbjct: 410 DIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGK 454
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAAC------EAEKNHN 104
+FN+++ EG E + +EM + P+ +YN L+ A C EAEK
Sbjct: 246 TTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK--- 302
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
++ +M VR + + Y MI C V +A + R M KG+
Sbjct: 303 ----------VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCL 352
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQR---RLLEARDLF 221
+Y +++ +CK ++ L + EM KG D L++ LC R R++EA D+
Sbjct: 353 TYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIV 412
Query: 222 QEMLLRGM-SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 280
++ + M P Y+ LV+ C G+ + ++Q E++ KG F PS TY
Sbjct: 413 KDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG--------FKPSQETYR 464
Query: 281 ALIHG 285
A I G
Sbjct: 465 AFIDG 469
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVRI 112
S+N +++ C G + EAE V +EM D V YNT+I C + V+
Sbjct: 283 SYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCS-------NFEVVKA 335
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
EL+ M ++ + TY ++ +C V+ + + R M KG + ++
Sbjct: 336 KELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEG 395
Query: 173 FCKNKEMGKALE----MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
C +++ + +E +K + + +P + Y LL++ LC ++ A ++ EM+ +G
Sbjct: 396 LCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
Query: 229 MSPGGRTYDTLVEAYCLKGE 248
P TY ++ Y + G+
Sbjct: 456 FKPSQETYRAFIDGYGIVGD 475
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 25/273 (9%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
S+NA++ L G + + + V ++M + PD +TYN ++ A K R+
Sbjct: 224 SYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD-------RL 276
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
L +M SP+ TY ++ N+ A+ +L M E G+ P ++ +I
Sbjct: 277 YRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDG 336
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ ++ E + G PDV Y ++I L +A ++F+EM +G P
Sbjct: 337 LSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN 396
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
TY++++ +C+ G+F + L E+ +G +P+ V Y+ L++ L +
Sbjct: 397 VFTYNSMIRGFCMAGKFKEACALLKEMESRG--------CNPNFVVYSTLVNNLKNAGKV 448
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIR 325
EA E+++ M E + Y +IS ++ R
Sbjct: 449 LEAHEVVKDMVE------KGHYVHLISKLKKYR 475
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 8/232 (3%)
Query: 109 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 168
Y I +Y QM +P+ TY ++ + + +L M + G SP +Y+
Sbjct: 238 YKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNI 297
Query: 169 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
++ + AL + M + G+ P V + LI L +L + E + G
Sbjct: 298 LLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG 357
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 288
+P Y ++ Y GE K + E+ +KG LP ++ TYN++I G C
Sbjct: 358 CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP--------NVFTYNSMIRGFCM 409
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+ EA +L+ M +P+ V YS +++ + ++ +A E+ +M +K
Sbjct: 410 AGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 156/396 (39%), Gaps = 86/396 (21%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
Y ++++F + + ++ M + G A +++ +I C E G A ++ + +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFI 211
Query: 191 DKGIF---PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
F P H+Y ++ L ++ ++++ML G +P TY+ ++ A G
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 307
+ +++ L DE+++ GF SP L TYN L+H L +P AL +L M E+ +
Sbjct: 272 KTDRLYRLLDEMVKDGF--------SPDLYTYNILLHHLATGNKPLAALNLLNHMREVGV 323
Query: 308 DPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC-WPLDQDTNESLVKDLSNHDTFSS 366
+P + ++ +I G R +L E C + +D+ D+ ++
Sbjct: 324 EPGVIHFTTLIDGLSRAGKL-------------EACKYFMDETVKVGCTPDVV---CYTV 367
Query: 367 LVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAH 423
++ Y + +KAE K + LP+ +Y ++ G
Sbjct: 368 MITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGF-------------------- 407
Query: 424 CLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 483
C +FK L+K RG P VY
Sbjct: 408 ----------------CMAGKFKEACALLKEMESRGC----------------NPNFVVY 435
Query: 484 NLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVL 519
+ L+ + G V +A+++ K+M+ G H+ S L
Sbjct: 436 STLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKL 471
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 20/302 (6%)
Query: 44 FAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEA 99
F + K E ++ + +++ C G I EAE V +EM +P+ TY+ +I A C
Sbjct: 244 FDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRC 303
Query: 100 EKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL 159
+ R +++ M +PN T+ ++R+ R E+ + + M + G
Sbjct: 304 GQ-------ISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 160 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 219
P +Y+ +I C+++ + A+++ M+ K + + + + + +R + A
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHR 416
Query: 220 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 279
++ +M+ P TY+ L+ + V ++ E+ K P++ TY
Sbjct: 417 MYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDK--------EVEPNVNTY 468
Query: 280 NALIHGLCFFQRPDEALEILRGM-PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 338
L+ C + A ++ + M E L P Y V++ RR +L+K EL +M
Sbjct: 469 RLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMI 528
Query: 339 QK 340
QK
Sbjct: 529 QK 530
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 121/294 (41%), Gaps = 20/294 (6%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSI 107
E + +F +I+R G EA M D PD + ++ +IS +
Sbjct: 183 EISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASE--- 239
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
+ + P+ Y ++R +C + EA + + M G+ P+ +YS
Sbjct: 240 -----AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYS 294
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+I C+ ++ +A ++ +MLD G P+ + L+++ R + ++ +M
Sbjct: 295 IVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G P TY+ L+EA+C + + +I+K + T+N + +
Sbjct: 355 GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK--------KCEVNASTFNTIFRYIE 406
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
+ + A + M E +P+ V+Y+ ++ F + ++K EMD KE
Sbjct: 407 KKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKE 460
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 158/380 (41%), Gaps = 44/380 (11%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
Y MI L + + A ++ LM + + ++++ +I R+ + +A+ M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
D G PD A+ ++I L +RR EA+ F + R P Y LV +C GE S
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 310
+ +K F + P++ TY+ +I LC + A ++ M + P+
Sbjct: 273 EA--------EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPN 324
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 370
++++ ++ + K ++ +M +K C P DT T++ L+
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQM-KKLGCEP---DT-----------ITYNFLIEA 369
Query: 371 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTI 427
+C ++ E A+K+ + + ++ ++ + + KK A R+ + A C
Sbjct: 370 HCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCE-- 427
Query: 428 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 487
P+ + Y+IL+ ++ +V + + M + P Y LL+
Sbjct: 428 PNTVTYNILMRMFVGSKSTDMV---------------LKMKKEMDDKEVEPNVNTYRLLV 472
Query: 488 FDHCIGGNVHKAYDMYKEML 507
C G+ + AY ++KEM+
Sbjct: 473 TMFCGMGHWNNAYKLFKEMV 492
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
L TT+ +++ C R+EE + IL+ M E P +Y+ +I + +L
Sbjct: 259 LVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASL 318
Query: 184 EMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY 243
+ EM I PDV AYG L+ LC R+ +LF EM + + Y L+E +
Sbjct: 319 RVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGF 378
Query: 244 CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMP 303
G+ +L ++++ G++ + YNA+I GLC + D+A ++ +
Sbjct: 379 VADGKVRSACNLWEDLVDSGYI--------ADIGIYNAVIKGLCSVNQVDKAYKLFQVAI 430
Query: 304 EMLLDPDEVSYSAVISGF 321
E L+PD + S ++ +
Sbjct: 431 EEELEPDFETLSPIMVAY 448
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 181/454 (39%), Gaps = 62/454 (13%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+F ++K LC GRI E +LQ M + PD Y +I +E N + S+
Sbjct: 265 TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLV-SEGNLDASL----- 318
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
++ +M E+ P+ Y ++ C RVE + M K + + Y +I
Sbjct: 319 -RVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEG 377
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
F + ++ A + +++D G D+ Y +I+ LC ++ +A LFQ + + P
Sbjct: 378 FVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPD 437
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF-LPYYVTSF------------------- 272
T ++ AY + S ++ + + + G+ + Y+T F
Sbjct: 438 FETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFY 497
Query: 273 ------SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRE 326
S+ YN L+ L ++L + M ++ +PD SYS I F +
Sbjct: 498 ILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Query: 327 LRKA---FELKLEMD-----------QKETCWPLDQDTNESLVKD-LSNHDT------FS 365
++ A E +EM K C + D LV++ L N ++ ++
Sbjct: 558 VKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYA 617
Query: 366 SLVNDYCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVA 422
V C AE +K+ Q + V YC +++G+ K T + A+ +
Sbjct: 618 LTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKR 677
Query: 423 HCLTIPSYIIY-DILIEKCANNEFKSVVELVKGF 455
+T ++Y ++LIE+ V+ +K F
Sbjct: 678 KVMTEADMVVYEEMLIEQTKKKTADLVLSGIKFF 711
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 102/260 (39%), Gaps = 27/260 (10%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
P+E + +IR+ D R + M + G P Y+RI+ KN AL +
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAV 250
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
+ + G+ + + +L++ LC R+ E ++ Q M P Y +++
Sbjct: 251 YEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVS 310
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
+G + DE+ + P ++ Y L+ GLC R + E+ M
Sbjct: 311 EGNLDASLRVWDEMRR--------DEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGK 362
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD--LSNHDT 363
+ D Y +I GF ++R A L W E LV +++
Sbjct: 363 QILIDREIYRVLIEGFVADGKVRSACNL----------W-------EDLVDSGYIADIGI 405
Query: 364 FSSLVNDYCAEDKAEMALKL 383
+++++ C+ ++ + A KL
Sbjct: 406 YNAVIKGLCSVNQVDKAYKL 425
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 25/291 (8%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD------PDCVTYNTLISAACEAEKNHNLSIPYV 110
+FN +I CGE + + + V+Q M P +YN ++ N L +
Sbjct: 186 TFNLLICS-CGEAGLAK-QAVVQFMKSKTFNYRPFKHSYNAIL--------NSLLGVKQY 235
Query: 111 RIVE-LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
+++E +Y QM SP+ TY ++ +++ + MA G SP + +Y+ +
Sbjct: 236 KLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNIL 295
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
+ K + AL M + GI P V Y LI L L + EM+ G
Sbjct: 296 LHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGC 355
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
P Y ++ Y + GE K + E+ KG LP ++ TYN++I GLC
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP--------NVFTYNSMIRGLCMA 407
Query: 290 QRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
EA +L+ M +P+ V YS ++S R+ +L +A ++ EM +K
Sbjct: 408 GEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKK 458
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 50/262 (19%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
S+NA++ L G + + E V ++M + PD +TYN L+ N+ L R
Sbjct: 221 SYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWT------NYRLG-KMDRF 273
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA-------DS 165
L+ +M SP+ TY ++ + N+ A+ L M E G+ P D
Sbjct: 274 DRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 166 YSR----------------------------IISRFCKNKEMGKALEMKVEMLDKGIFPD 197
SR +I+ + + E+ KA EM EM KG P+
Sbjct: 334 LSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN 393
Query: 198 VHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 257
V Y +I+ LC EA L +EM RG +P Y TLV G+ S+ +
Sbjct: 394 VFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIR 453
Query: 258 EVIQKGFLPYYVTSFSPSLVTY 279
E+++KG + V P ++ Y
Sbjct: 454 EMVKKGHYVHLV----PKMMKY 471
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 122/318 (38%), Gaps = 44/318 (13%)
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
+Y L++ + GE+ ++ L DE++Q GF + T+N LI +
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGF--------PTTARTFNLLICSCGEAGLAKQ 202
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
A+ P + SY+A+++ +++ K W Q +
Sbjct: 203 AVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQY------------KLIEWVYKQMLEDGF 250
Query: 355 VKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKR 414
D+ ++ D+ + + + PDS +Y +LL+ L K K
Sbjct: 251 SPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGN-----KP 305
Query: 415 LLLFYIVAHCLTI---PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTM 471
L + H + PS + Y LI+ G G + D M
Sbjct: 306 LAALTTLNHMKEVGIDPSVLHYTTLID---------------GLSRAGNLEACKYFLDEM 350
Query: 472 LHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERY 531
+ RP+ Y ++I + + G + KA +M++EM G + ++F+ ++I+ L +
Sbjct: 351 VKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEF 410
Query: 532 NEMSWVIRNT-LRSCNLN 548
E W+++ R CN N
Sbjct: 411 REACWLLKEMESRGCNPN 428
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 48/343 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
++S+ A+++ G+ AE + + M +P +TY ++ E +K +
Sbjct: 174 VISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK-------FK 226
Query: 111 RIVELYHQMCVRE---LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
E++ + + L P++ Y MI ++ E+A + M KG+ +Y+
Sbjct: 227 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 286
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
++S KE+ K + +M I PDV +Y LLI+ RR EA +F+EML
Sbjct: 287 SLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 228 GMSPGGRTYDTLVEAYCLKG---EFSKVF-----------------------HLQD-EVI 260
G+ P + Y+ L++A+ + G + VF + D E
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 261 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
+K F V F P++VTY LI G ++ +E+ M + ++ + ++
Sbjct: 404 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 463
Query: 321 FRRIRELRKAFELKLEMDQKETCW-PLDQDTNESLVKDLSNHD 362
R + A EM E+C P DQ L+ S D
Sbjct: 464 SGRCKNFGSALGWYKEM---ESCGVPPDQKAKNVLLSLASTQD 503
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 28/285 (9%)
Query: 125 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 184
+PN +Y ++ + + A I R M G P A +Y I+ F + + +A E
Sbjct: 171 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 230
Query: 185 MKVEMLDKG---IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
+ +LD+ + PD Y ++I + +AR +F M+ +G+ TY++L+
Sbjct: 231 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 290
Query: 242 AYCLKGEFSKVF-HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 300
E SK++ +Q IQ P +V+Y LI +R +EAL +
Sbjct: 291 FETSYKEVSKIYDQMQRSDIQ------------PDVVSYALLIKAYGRARREEEALSVFE 338
Query: 301 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
M + + P +Y+ ++ AF + ++Q +T + + DL +
Sbjct: 339 EMLDAGVRPTHKAYNILLD----------AFAISGMVEQAKTV--FKSMRRDRIFPDLWS 386
Query: 361 HDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 405
+ T S + + AE K + P+ V+Y L+ G K
Sbjct: 387 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 22/257 (8%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYV 110
++++ ++I C G+I +A + +EM+ DCV TY+ ++ C++
Sbjct: 200 VITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDME------- 252
Query: 111 RIVELYHQMCVRE----LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 166
R +EL +M + +SPN TY +I+ FC++ RVEEA+ +L M +G P+ +
Sbjct: 253 RALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTA 312
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
+I +N E KAL ++ L K G + L +R EA +F+ ML
Sbjct: 313 CVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLML 372
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
+RG+ P G + CL + F L E+ +K V S S + + L+ G
Sbjct: 373 VRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKD-----VKSTIDSDI-HAVLLLG 426
Query: 286 LCFFQRPDEALEILRGM 302
LC EA ++ + M
Sbjct: 427 LCQQGNSWEAAKLAKSM 443
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 166/363 (45%), Gaps = 29/363 (7%)
Query: 5 LRVSFTVATLKTFRIRGFAAGKATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNA--VI 62
LR TL + R + KA + + P+++ + E+C V+ ++
Sbjct: 79 LRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLI--KYVIESYRKEECFVNVKTMRIV 136
Query: 63 KRLCGEGRIR-EAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYH 117
LC + + EA VL++ + D V YN +I A+K +L+I + I E+
Sbjct: 137 LTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLF--ADKG-DLNIADMLIKEMD- 192
Query: 118 QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 177
CV L P+ TY MI +C+ ++++A + + M++ ++ +YSRI+ CK+
Sbjct: 193 --CV-GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSG 249
Query: 178 EMGKALEMKVEML--DKG--IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+M +ALE+ EM D G I P+ Y L+IQ C +RR+ EA + M RG P
Sbjct: 250 DMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNR 309
Query: 234 RTYDTLVEAYCLKGEFSKVF-HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
T L++ E K L D++++ G + FS + V+ L +R
Sbjct: 310 VTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLS-ECFSSATVS-------LIRMKRW 361
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
+EA +I R M + PD ++ S V + F L E+++K+ +D D +
Sbjct: 362 EEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHA 421
Query: 353 SLV 355
L+
Sbjct: 422 VLL 424
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 118/276 (42%), Gaps = 35/276 (12%)
Query: 274 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
P ++TY ++I+G C + D+A + + M + + V+YS ++ G + ++ +A EL
Sbjct: 198 PDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALEL 257
Query: 334 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQY---L 390
EM++++ L+ N T++ ++ +C + + E AL + + +
Sbjct: 258 LAEMEKED---------GGGLIS--PNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 391 PDSVSYCLLLNGLHK-----KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEF 445
P+ V+ C+L+ G+ + KA S+ +L+ V+ S + I +++ E
Sbjct: 307 PNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEK 366
Query: 446 KSVVELVKGFRMRGLVNEAARARDTMLHR----------------NYRPEGAVYNLLIFD 489
+ LV+G R GL +L R + ++ +L+
Sbjct: 367 IFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLG 426
Query: 490 HCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKAL 525
C GN +A + K ML + V +I+AL
Sbjct: 427 LCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEAL 462
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%), Gaps = 21/269 (7%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++N +I ++EA V +M + PD VTY TLI +A ++
Sbjct: 395 VTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAG--------FLD 446
Query: 112 I-VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
I +++Y +M LSP+ TY +I + A + M +G +P+ +++ +I
Sbjct: 447 IAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ K + AL++ +M + G PD Y +++++L H L EA +F EM +
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y LV+ + G K + ++Q G P++ T N+L+
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAG--------LRPNVPTCNSLLSTFLRVH 618
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVIS 319
R EA +L+ M + L P +Y+ ++S
Sbjct: 619 RMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 19/257 (7%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 358 DGHTYTTMVGNLGRAKQ-------FGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
+EA+ + M E G P +Y +I K + A++M M + G+ PD Y ++
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
I L L A LF EM+ +G +P T++ ++ + + L ++ G
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAG- 529
Query: 265 LPYYVTSFSPSLVTYNALIH--GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
F P VTY+ ++ G C F +EA + M PDE Y ++ +
Sbjct: 530 -------FQPDKVTYSIVMEVLGHCGFL--EEAEGVFAEMQRKNWVPDEPVYGLLVDLWG 580
Query: 323 RIRELRKAFELKLEMDQ 339
+ + KA++ M Q
Sbjct: 581 KAGNVDKAWQWYQAMLQ 597
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 118/324 (36%), Gaps = 82/324 (25%)
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G D H Y ++ L ++ E L EM+ G P TY+ L+ +Y +
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 253 FHLQDEVIQKGFLPYYVTSFSPSLVTYNAL--IHGLCFFQRPDEALEILRGMPEMLLDPD 310
++ +++ + G P VTY L IH F D A+++ + M E L PD
Sbjct: 414 MNVFNQMQEAG--------CEPDRVTYCTLIDIHAKAGFL--DIAMDMYQRMQEAGLSPD 463
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 370
+YS +I+ + L A L EM + Q +LV TF+ ++
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEM--------VGQGCTPNLV-------TFNIMIAL 508
Query: 371 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTI 427
+ E ALKL A + PD V+Y +++ ++ HC
Sbjct: 509 HAKARNYETALKLYRDMQNAGFQPDKVTYSIVME------------------VLGHC--- 547
Query: 428 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 487
G + EA M +N+ P+ VY LL+
Sbjct: 548 -------------------------------GFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Query: 488 FDHCIGGNVHKAYDMYKEMLHYGF 511
GNV KA+ Y+ ML G
Sbjct: 577 DLWGKAGNVDKAWQWYQAMLQAGL 600
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 48/343 (13%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
++S+ A+++ G+ AE + + M +P +TY ++ E +K +
Sbjct: 181 VISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK-------FK 233
Query: 111 RIVELYHQMCVRE---LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
E++ + + L P++ Y MI ++ E+A + M KG+ +Y+
Sbjct: 234 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 293
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
++S KE+ K + +M I PDV +Y LLI+ RR EA +F+EML
Sbjct: 294 SLMSFETSYKEVSKIYD---QMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 228 GMSPGGRTYDTLVEAYCLKG---EFSKVF-----------------------HLQD-EVI 260
G+ P + Y+ L++A+ + G + VF + D E
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 261 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
+K F V F P++VTY LI G ++ +E+ M + ++ + ++
Sbjct: 411 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDA 470
Query: 321 FRRIRELRKAFELKLEMDQKETCW-PLDQDTNESLVKDLSNHD 362
R + A EM E+C P DQ L+ S D
Sbjct: 471 SGRCKNFGSALGWYKEM---ESCGVPPDQKAKNVLLSLASTQD 510
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 28/285 (9%)
Query: 125 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 184
+PN +Y ++ + + A I R M G P A +Y I+ F + + +A E
Sbjct: 178 TPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEE 237
Query: 185 MKVEMLDKG---IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
+ +LD+ + PD Y ++I + +AR +F M+ +G+ TY++L+
Sbjct: 238 VFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 297
Query: 242 AYCLKGEFSKVF-HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 300
E SK++ +Q IQ P +V+Y LI +R +EAL +
Sbjct: 298 FETSYKEVSKIYDQMQRSDIQ------------PDVVSYALLIKAYGRARREEEALSVFE 345
Query: 301 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
M + + P +Y+ ++ AF + ++Q +T + + DL +
Sbjct: 346 EMLDAGVRPTHKAYNILLD----------AFAISGMVEQAKTV--FKSMRRDRIFPDLWS 393
Query: 361 HDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 405
+ T S + + AE K + P+ V+Y L+ G K
Sbjct: 394 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 438
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 71 IREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSP 126
++EA V+Q+M PD +N+L++ CE N N S + + +M ++ P
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 186
+Y ++ RV E+ IL M G P SY ++ GK ++
Sbjct: 284 TSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIV 343
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
EM+++G P+ Y LI +LC R+ A LF++M + G+ YD L+ C
Sbjct: 344 DEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKG 403
Query: 247 GEFSKVFHLQDEVI 260
G F K L +E +
Sbjct: 404 GNFEKGRELWEEAL 417
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 119/258 (46%), Gaps = 28/258 (10%)
Query: 57 SFNAVIKRLCGEGRIREAE---TVLQEMTDP-DCVTYNTLISAACEAEKNHNLSIPYVRI 112
+F+ V + L G+ +A +L + + P D T +ISA C + H V
Sbjct: 140 TFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCS--RGHVKRALGV-- 195
Query: 113 VELYHQMCVRELSPNE-TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
++H V +S NE + YR ++ + + V+EA +++ M G++P ++ +++
Sbjct: 196 --MHHHKDV--ISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLT 251
Query: 172 RFCK---NKE----MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
C+ N+ + +AL + +EM I P +Y +L+ L RR+ E+ + ++M
Sbjct: 252 CLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQM 311
Query: 225 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 284
G P +Y +V L G F K + DE+I++G F P Y LI
Sbjct: 312 KRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERG--------FRPERKFYYDLIG 363
Query: 285 GLCFFQRPDEALEILRGM 302
LC +R + AL++ M
Sbjct: 364 VLCGVERVNFALQLFEKM 381
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 171/386 (44%), Gaps = 38/386 (9%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
T+ MI++ + +++ A IL M EKG+ D + +I + K + +++++ +M
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 249
D G+ + +Y L +++ + R + A+ F +M+ G+ P TY+ ++ + L
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 250 SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 309
+++ +G SP T+N +I+G C F++ DEA ++ M + P
Sbjct: 272 ETALRFFEDMKTRG--------ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
Query: 310 DEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVN 369
VSY+ +I G+ L +D+ + + ++ S ++ N T+S+L+
Sbjct: 324 SVVSYTTMIKGY-------------LAVDRVDDGLRIFEEMRSSGIE--PNATTYSTLLP 368
Query: 370 DYCAEDK---AEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLT 426
C K A+ LK P S L L KA A +L + L
Sbjct: 369 GLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMA--TLN 426
Query: 427 IPSYII-YDILIE-KCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYN 484
+P+ Y +LIE +C + + ++L+ + ++ R +DT+ E + YN
Sbjct: 427 VPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEII---LRHQDTL-----EMEPSAYN 478
Query: 485 LLIFDHCIGGNVHKAYDMYKEMLHYG 510
+I C G KA ++++++ G
Sbjct: 479 PIIEYLCNNGQTAKAEVLFRQLMKRG 504
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 95/216 (43%), Gaps = 14/216 (6%)
Query: 112 IVELYHQMCV------RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
+ +L H C+ + + +E + +I + V+E+V I + M + G+ S
Sbjct: 163 VSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKS 222
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y+ + + A +M+ +G+ P H Y L++ RL A F++M
Sbjct: 223 YNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMK 282
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
RG+SP T++T++ +C F DE +K F+ PS+V+Y +I G
Sbjct: 283 TRGISPDDATFNTMINGFCR-------FKKMDEA-EKLFVEMKGNKIGPSVVSYTTMIKG 334
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
R D+ L I M ++P+ +YS ++ G
Sbjct: 335 YLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/446 (21%), Positives = 181/446 (40%), Gaps = 40/446 (8%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
F +I+ G ++E+ + Q+M D +YN+L + Y+
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR-------YMMAK 240
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+++M + P TY M+ F R+E A+ M +G+SP +++ +I+ F
Sbjct: 241 RYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGF 300
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
C+ K+M +A ++ VEM I P V +Y +I+ R+ + +F+EM G+ P
Sbjct: 301 CRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNA 360
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
TY TL+ C G+ + ++ ++ K P + F LV+ +
Sbjct: 361 TTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAA------ 414
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
A E+L+ M + + + Y +I + +A +L + +KE QDT
Sbjct: 415 -ATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILR-HQDT--- 469
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAK 413
L + S ++ + + KAE+ + + + + D + L+ G K+
Sbjct: 470 LEMEPSAYNPIIEYLCNNGQTAKAEVLFR-QLMKRGVQDQDALNNLIRGHAKEGNPD--- 525
Query: 414 RLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLH 473
SY I I+ + E + L+K + +G +A A D+M+
Sbjct: 526 --------------SSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVE 571
Query: 474 RNYRPEGAVYNLLIFDHCIGGNVHKA 499
+ P+ +++ +I G V A
Sbjct: 572 DGHVPDSSLFRSVIESLFEDGRVQTA 597
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 102/511 (19%), Positives = 196/511 (38%), Gaps = 90/511 (17%)
Query: 3 LLLRVSFTVATLKTFRIRGFAAGKATTEKGLVSPPNVLIPGFAAGKATTEK--------- 53
L LR+ + + + RG + AT N +I GF K E
Sbjct: 267 LSLRLETALRFFEDMKTRGISPDDATF--------NTMINGFCRFKKMDEAEKLFVEMKG 318
Query: 54 -----CLVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHN 104
+VS+ +IK R+ + + +EM +P+ TY+TL+ C+A K
Sbjct: 319 NKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGK--- 375
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEE---AVGILRLMAEKGLSP 161
V + M + ++P + + ++L +++ + A +L+ MA +
Sbjct: 376 ----MVEAKNILKNMMAKHIAPKDNS--IFLKLLVSQSKAGDMAAATEVLKAMATLNVPA 429
Query: 162 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIF--------PDVHAYGLLIQLLCHQRR 213
A Y +I CK +A+++ +++K I + AY +I+ LC+ +
Sbjct: 430 EAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQ 489
Query: 214 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 273
+A LF++++ RG+ + L+ + +G + + + ++G +P +
Sbjct: 490 TAKAEVLFRQLMKRGVQDQD-ALNNLIRGHAKEGNPDSSYEILKIMSRRG-VPRESNA-- 545
Query: 274 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
Y LI P +A L M E PD + +VI ++ A +
Sbjct: 546 -----YELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRV 600
Query: 334 KLEMDQKETCWPLDQD--------------TNESLVK-DLSNHD----TFSSLVNDYCAE 374
+ M K + D E+L + DL N + SL++ +
Sbjct: 601 MMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLSEK 660
Query: 375 DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAK-RLLLFYIVAHCLTIPSYIIY 433
K ALK LL GL + + F+ +L ++ T+ +Y +
Sbjct: 661 GKTIAALK---------------LLDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVL 705
Query: 434 DILIEKCANNEFKSVVELVKGFRMRGLVNEA 464
++EK ++ ++KS EL+K G +A
Sbjct: 706 CKIMEKGSSTDWKSSDELIKSLNQEGNTKQA 736
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++N +I + EA V +M + PD VTY TLI +A ++
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG--------FLD 451
Query: 112 I-VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
I +++Y +M LSP+ TY +I + A + M ++G +P+ +Y+ ++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
K + AL++ +M + G PD Y +++++L H L EA +F EM +
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y LV+ + G K + ++ G P++ T N+L+
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG--------LRPNVPTCNSLLSTFLRVN 623
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVIS 319
+ EA E+L+ M + L P +Y+ ++S
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 15/253 (5%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 363 DGHTYTTMVGNLGRAKQ-------FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
EA+ + M E G P +Y +I K + A++M M G+ PD Y ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
I L L A LF EM+ +G +P TY+ +++ + + L ++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
F P VTY+ ++ L +EA + M + PDE Y ++ + +
Sbjct: 535 -------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 325 RELRKAFELKLEM 337
+ KA++ M
Sbjct: 588 GNVEKAWQWYQAM 600
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 121/324 (37%), Gaps = 82/324 (25%)
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G D H Y ++ L ++ L EM+ G P TY+ L+ +Y ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 253 FHLQDEVIQKGFLPYYVTSFSPSLVTYNAL--IHGLCFFQRPDEALEILRGMPEMLLDPD 310
++ +++ + G P VTY L IH F D A+++ + M L PD
Sbjct: 419 MNVFNQMQEAG--------CKPDRVTYCTLIDIHAKAGFL--DIAMDMYQRMQAGGLSPD 468
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 370
+YS +I+ + L A +L EM +DQ +LV T++ +++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEM--------VDQGCTPNLV-------TYNIMMDL 513
Query: 371 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTI 427
+ + ALKL A + PD V+Y +++ ++ HC
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME------------------VLGHC--- 552
Query: 428 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 487
G + EA M +N+ P+ VY LL+
Sbjct: 553 -------------------------------GYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 488 FDHCIGGNVHKAYDMYKEMLHYGF 511
GNV KA+ Y+ MLH G
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGL 605
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++N +I + EA V +M + PD VTY TLI +A ++
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG--------FLD 451
Query: 112 I-VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
I +++Y +M LSP+ TY +I + A + M ++G +P+ +Y+ ++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
K + AL++ +M + G PD Y +++++L H L EA +F EM +
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y LV+ + G K + ++ G P++ T N+L+
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG--------LRPNVPTCNSLLSTFLRVN 623
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVIS 319
+ EA E+L+ M + L P +Y+ ++S
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 15/253 (5%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 363 DGHTYTTMVGNLGRAKQ-------FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
EA+ + M E G P +Y +I K + A++M M G+ PD Y ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
I L L A LF EM+ +G +P TY+ +++ + + L ++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
F P VTY+ ++ L +EA + M + PDE Y ++ + +
Sbjct: 535 -------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 325 RELRKAFELKLEM 337
+ KA++ M
Sbjct: 588 GNVEKAWQWYQAM 600
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 121/324 (37%), Gaps = 82/324 (25%)
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G D H Y ++ L ++ L EM+ G P TY+ L+ +Y ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 253 FHLQDEVIQKGFLPYYVTSFSPSLVTYNAL--IHGLCFFQRPDEALEILRGMPEMLLDPD 310
++ +++ + G P VTY L IH F D A+++ + M L PD
Sbjct: 419 MNVFNQMQEAG--------CKPDRVTYCTLIDIHAKAGFL--DIAMDMYQRMQAGGLSPD 468
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 370
+YS +I+ + L A +L EM +DQ +LV T++ +++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEM--------VDQGCTPNLV-------TYNIMMDL 513
Query: 371 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTI 427
+ + ALKL A + PD V+Y +++ ++ HC
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME------------------VLGHC--- 552
Query: 428 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 487
G + EA M +N+ P+ VY LL+
Sbjct: 553 -------------------------------GYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 488 FDHCIGGNVHKAYDMYKEMLHYGF 511
GNV KA+ Y+ MLH G
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGL 605
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++N +I + EA V +M + PD VTY TLI +A ++
Sbjct: 400 VTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG--------FLD 451
Query: 112 I-VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
I +++Y +M LSP+ TY +I + A + M ++G +P+ +Y+ ++
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
K + AL++ +M + G PD Y +++++L H L EA +F EM +
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y LV+ + G K + ++ G P++ T N+L+
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG--------LRPNVPTCNSLLSTFLRVN 623
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVIS 319
+ EA E+L+ M + L P +Y+ ++S
Sbjct: 624 KIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 15/253 (5%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D TY T++ A++ + I +L +M PN TY +I + N +
Sbjct: 363 DGHTYTTMVGNLGRAKQ-------FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
EA+ + M E G P +Y +I K + A++M M G+ PD Y ++
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
I L L A LF EM+ +G +P TY+ +++ + + L ++ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAG- 534
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
F P VTY+ ++ L +EA + M + PDE Y ++ + +
Sbjct: 535 -------FEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 325 RELRKAFELKLEM 337
+ KA++ M
Sbjct: 588 GNVEKAWQWYQAM 600
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 121/324 (37%), Gaps = 82/324 (25%)
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G D H Y ++ L ++ L EM+ G P TY+ L+ +Y ++
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 253 FHLQDEVIQKGFLPYYVTSFSPSLVTYNAL--IHGLCFFQRPDEALEILRGMPEMLLDPD 310
++ +++ + G P VTY L IH F D A+++ + M L PD
Sbjct: 419 MNVFNQMQEAG--------CKPDRVTYCTLIDIHAKAGFL--DIAMDMYQRMQAGGLSPD 468
Query: 311 EVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVND 370
+YS +I+ + L A +L EM +DQ +LV T++ +++
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEM--------VDQGCTPNLV-------TYNIMMDL 513
Query: 371 YCAEDKAEMALKL---RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTI 427
+ + ALKL A + PD V+Y +++ ++ HC
Sbjct: 514 HAKARNYQNALKLYRDMQNAGFEPDKVTYSIVME------------------VLGHC--- 552
Query: 428 PSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLI 487
G + EA M +N+ P+ VY LL+
Sbjct: 553 -------------------------------GYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 488 FDHCIGGNVHKAYDMYKEMLHYGF 511
GNV KA+ Y+ MLH G
Sbjct: 582 DLWGKAGNVEKAWQWYQAMLHAGL 605
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 10/190 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD---PDCVTYNTLISAACEAEKNHNLSIPYVRI 112
++ N+++ L E I A V ++ D PD T+N LI C+A K +
Sbjct: 240 IAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARK-------FDDA 292
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ M V E +P+ TY + +C +L M E G +P+ +Y+ ++
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
K+K++ +AL + +M + G PD Y LI +L R +A ++F++M +G+
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Query: 233 GRTYDTLVEA 242
Y+T++ A
Sbjct: 413 VLVYNTMISA 422
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 93/251 (37%), Gaps = 63/251 (25%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
+V++ + ++ C EG R +L+EM + C
Sbjct: 308 VVTYTSFVEAYCKEGDFRRVNEMLEEMRENGC---------------------------- 339
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
+PN TY ++ +V EA+G+ M E G P A YS +I
Sbjct: 340 ----------NPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM----- 229
K A E+ +M ++G+ DV Y +I H +RD LL+ M
Sbjct: 390 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHH-----SRDEMALRLLKRMEDEEG 444
Query: 230 ---SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV--TSFSPSLVTYNALIH 284
SP TY L++ C K + + G L +++ S + TY LI
Sbjct: 445 ESCSPNVETYAPLLKMCCHKKKMKLL----------GILLHHMVKNDVSIDVSTYILLIR 494
Query: 285 GLCFFQRPDEA 295
GLC + +EA
Sbjct: 495 GLCMSGKVEEA 505
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 54 CLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPY 109
CL S++A+ L EG++ E E VL M +P Y + A C A K
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA---- 352
Query: 110 VRIV--ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSY 166
V ++ E+ C+ P Y +I+ CD + EAVG L+ M+++ + ++Y
Sbjct: 353 VSVINKEMMQGHCL----PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETY 408
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
++ C++ + +A ++ EML K FP V Y ++I+ LC R EA +EM+
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVS 468
Query: 227 RGMSPGGRTYDTLVEAYCL 245
+ M P + L E+ C
Sbjct: 469 QDMVPESSVWKALAESVCF 487
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 19/291 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAAC-EAEKNHNLSIPY 109
+ + N ++K LC R A V QEM PD +Y L+ C E + + Y
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
++ ++ + + YR ++ CD V++A+ IL + KGL Y I
Sbjct: 212 ----SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 170 ISRFCKNKEMG--KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+ ++ G + + E L +G P + +Y + L + +L+E ++ M +
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G P Y V+A C G+ + + ++ + +G P++ YN LI GLC
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL-------PTVGVYNVLIKGLC 380
Query: 288 FFQRPDEALEILRGMPEML-LDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
+ EA+ L+ M + + +E +Y ++ G R + +A ++ EM
Sbjct: 381 DDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 120/301 (39%), Gaps = 48/301 (15%)
Query: 57 SFNAVIKRLCGEGRIREAETVL--------QEMTDPDCVTYNTLISAACEA--------- 99
S+ ++K C EG++ EA +L Q+ + D V Y L+ A C+A
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 100 -------------------EKNH--NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLF 138
E H + S R+ L + +R P +Y M
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 139 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE-MKVEMLDKGIFPD 197
+ ++ E +L M KG P Y + C+ ++ +A+ + EM+ P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 198 VHAYGLLIQLLCHQRRLLEARDLFQEMLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
V Y +LI+ LC + +EA ++M + TY TLV+ C G+F + +
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
+E++ + S P + TY+ +I GLC R EA+ L M + P+ + A
Sbjct: 429 EEML--------IKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKA 480
Query: 317 V 317
+
Sbjct: 481 L 481
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 167/419 (39%), Gaps = 59/419 (14%)
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM- 185
++ + +IR F R+E+A+ + + + E + S+ ++ K E+ A +
Sbjct: 80 KDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF 139
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
+ + + A LL+++LC R A +FQEM +G P +Y L++ +CL
Sbjct: 140 RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL 199
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
+G+ + HL + F +V Y L+ LC D+A+EIL +
Sbjct: 200 EGKLEEATHL----LYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRK 255
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD-LSNHDTF 364
L + Y + +G E + + E+L++ + D++
Sbjct: 256 GLKAPKRCYHHIEAGHWE--------------SSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 365 SSLVNDYCAEDK----AEMALKLRYQAQYLPDSVSY-----CLLLNGLHKKATSRFAKRL 415
S++ D E K E+ L +R + + P Y L G K+A S K +
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKG-FEPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Query: 416 LLFYIVAHCLTIPSYIIYDILIE----------------------KCANNEFKSVVELVK 453
+ HCL P+ +Y++LI+ C NE ++ LV
Sbjct: 361 MQ----GHCL--PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE-ETYQTLVD 413
Query: 454 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
G G EA++ + ML +++ P Y+++I C ++A +EM+ V
Sbjct: 414 GLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 157/382 (41%), Gaps = 51/382 (13%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVRIV 113
F +VI+ GR+ +A ++ + + + +CV +++TL+ E K L
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQ---EMVKESELEAA----C 136
Query: 114 ELYHQMCV-RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
++ + C E++ T ++++ C NR + A + + M +G P DSY ++
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKG 196
Query: 173 FCKNKEMGKALEMKVEML----DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
FC ++ +A + M KG D+ Y +L+ LC + +A ++ ++L +G
Sbjct: 197 FCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Query: 229 MSPGGRTYDTLVEAYCLKGE--FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 286
+ R Y + + +V L E + +G + P L +Y+A+ L
Sbjct: 257 LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAI--------PCLDSYSAMATDL 308
Query: 287 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 346
+ E E+L M +P Y A + R +L++A + + + C P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 347 -------------DQDTNESL---------VKDLSNHDTFSSLVNDYCAEDK---AEMAL 381
D + E++ V ++N +T+ +LV+ C + + A +
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 382 KLRYQAQYLPDSVSYCLLLNGL 403
+ + P +Y +++ GL
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGL 450
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 54 CLVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPY 109
CL S++A+ L EG++ E E VL M +P Y + A C A K
Sbjct: 297 CLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEA---- 352
Query: 110 VRIV--ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK-GLSPHADSY 166
V ++ E+ C+ P Y +I+ CD + EAVG L+ M+++ + ++Y
Sbjct: 353 VSVINKEMMQGHCL----PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETY 408
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
++ C++ + +A ++ EML K FP V Y ++I+ LC R EA +EM+
Sbjct: 409 QTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVS 468
Query: 227 RGMSPGGRTYDTLVEAYCL 245
+ M P + L E+ C
Sbjct: 469 QDMVPESSVWKALAESVCF 487
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 19/291 (6%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAAC-EAEKNHNLSIPY 109
+ + N ++K LC R A V QEM PD +Y L+ C E + + Y
Sbjct: 152 ITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLY 211
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
++ ++ + + YR ++ CD V++A+ IL + KGL Y I
Sbjct: 212 ----SMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 170 ISRFCKNKEMG--KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+ ++ G + + E L +G P + +Y + L + +L+E ++ M +
Sbjct: 268 EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSK 327
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G P Y V+A C G+ + + ++ + +G P++ YN LI GLC
Sbjct: 328 GFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCL-------PTVGVYNVLIKGLC 380
Query: 288 FFQRPDEALEILRGMPEML-LDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
+ EA+ L+ M + + +E +Y ++ G R + +A ++ EM
Sbjct: 381 DDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM 431
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 120/301 (39%), Gaps = 48/301 (15%)
Query: 57 SFNAVIKRLCGEGRIREAETVL--------QEMTDPDCVTYNTLISAACEA--------- 99
S+ ++K C EG++ EA +L Q+ + D V Y L+ A C+A
Sbjct: 189 SYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEI 248
Query: 100 -------------------EKNH--NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLF 138
E H + S R+ L + +R P +Y M
Sbjct: 249 LGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 139 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE-MKVEMLDKGIFPD 197
+ ++ E +L M KG P Y + C+ ++ +A+ + EM+ P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 198 VHAYGLLIQLLCHQRRLLEARDLFQEMLLR-GMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
V Y +LI+ LC + +EA ++M + TY TLV+ C G+F + +
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
+E++ + S P + TY+ +I GLC R EA+ L M + P+ + A
Sbjct: 429 EEML--------IKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKA 480
Query: 317 V 317
+
Sbjct: 481 L 481
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 167/419 (39%), Gaps = 59/419 (14%)
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM- 185
++ + +IR F R+E+A+ + + + E + S+ ++ K E+ A +
Sbjct: 80 KDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF 139
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
+ + + A LL+++LC R A +FQEM +G P +Y L++ +CL
Sbjct: 140 RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL 199
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
+G+ + HL + F +V Y L+ LC D+A+EIL +
Sbjct: 200 EGKLEEATHL----LYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRK 255
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD-LSNHDTF 364
L + Y + +G E + + E+L++ + D++
Sbjct: 256 GLKAPKRCYHHIEAGHWE--------------SSSEGIERVKRLLTETLIRGAIPCLDSY 301
Query: 365 SSLVNDYCAEDK----AEMALKLRYQAQYLPDSVSY-----CLLLNGLHKKATSRFAKRL 415
S++ D E K E+ L +R + + P Y L G K+A S K +
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKG-FEPTPFIYGAKVKALCRAGKLKEAVSVINKEM 360
Query: 416 LLFYIVAHCLTIPSYIIYDILIE----------------------KCANNEFKSVVELVK 453
+ HCL P+ +Y++LI+ C NE ++ LV
Sbjct: 361 MQ----GHCL--PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANE-ETYQTLVD 413
Query: 454 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
G G EA++ + ML +++ P Y+++I C ++A +EM+ V
Sbjct: 414 GLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMV 472
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 157/382 (41%), Gaps = 51/382 (13%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVRIV 113
F +VI+ GR+ +A ++ + + + +CV +++TL+ E K L
Sbjct: 84 FASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQ---EMVKESELEAA----C 136
Query: 114 ELYHQMCV-RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
++ + C E++ T ++++ C NR + A + + M +G P DSY ++
Sbjct: 137 HIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKG 196
Query: 173 FCKNKEMGKALEMKVEML----DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
FC ++ +A + M KG D+ Y +L+ LC + +A ++ ++L +G
Sbjct: 197 FCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKG 256
Query: 229 MSPGGRTYDTLVEAYCLKGE--FSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 286
+ R Y + + +V L E + +G + P L +Y+A+ L
Sbjct: 257 LKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAI--------PCLDSYSAMATDL 308
Query: 287 CFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 346
+ E E+L M +P Y A + R +L++A + + + C P
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 347 -------------DQDTNESL---------VKDLSNHDTFSSLVNDYCAEDK---AEMAL 381
D + E++ V ++N +T+ +LV+ C + + A +
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 382 KLRYQAQYLPDSVSYCLLLNGL 403
+ + P +Y +++ GL
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGL 450
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 139/304 (45%), Gaps = 27/304 (8%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVR-IVELYH 117
N++I G++ + V M D + ++N+++S+ + + YV + L
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTK--------LGYVDDAIGLLD 179
Query: 118 QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK-- 175
+M + L P+ T+ ++ + + ++A+ +L+ M GL P S S ++ +
Sbjct: 180 EMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
+ ++GKA+ + L ++ DV+ LI + L AR +F M + +
Sbjct: 240 HLKLGKAIHGYI--LRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSL 297
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 295
L A LK + + ++ E I+ P +T+N+L G +P++A
Sbjct: 298 VSGLSYACLLKDAEALMIRMEKEGIK------------PDAITWNSLASGYATLGKPEKA 345
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
L+++ M E + P+ VS++A+ SG + R A ++ ++M Q+E P + T +L+
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM-QEEGVGP-NAATMSTLL 403
Query: 356 KDLS 359
K L
Sbjct: 404 KILG 407
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 111/258 (43%), Gaps = 42/258 (16%)
Query: 107 IPYVRIVELYHQMCVRELSPNET-----TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSP 161
+PY R+V + M + + + +Y C+++ +A ++ M ++G+ P
Sbjct: 276 LPYARMV--FDMMDAKNIVAWNSLVSGLSYACLLK---------DAEALMIRMEKEGIKP 324
Query: 162 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 221
A +++ + S + + KAL++ +M +KG+ P+V ++ + A +F
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVF 384
Query: 222 QEMLLRGMSPGGRTYDTL---------------VEAYCLKGEF----SKVFHLQDEVIQK 262
+M G+ P T TL V +CL+ L D +
Sbjct: 385 IKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 444
Query: 263 GFLPYYVTSF----SPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 318
G L + F + SL ++N ++ G F R +E + M E ++PD +++++V+
Sbjct: 445 GDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Query: 319 SGFRR---IRELRKAFEL 333
S + ++E K F+L
Sbjct: 505 SVCKNSGLVQEGWKYFDL 522
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 140/321 (43%), Gaps = 56/321 (17%)
Query: 30 EKGLVSPPNVLIPGFA-AGKATT---------EKCLVSFNAVIKRLCGEGRIREAETVLQ 79
E+ +VS N +I G+A +G+ E+ +VS+N+++K L GRI EA + +
Sbjct: 137 ERNVVSW-NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFE 195
Query: 80 EMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFC 139
M D V++ ++ + N + R L+ M R N ++ MI +
Sbjct: 196 RMPRRDVVSWTAMVDGLAK-----NGKVDEAR--RLFDCMPER----NIISWNAMITGYA 244
Query: 140 DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVH 199
NR++EA + ++M E+ + S++ +I+ F +N+EM KA + M +K +
Sbjct: 245 QNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEKNVI---- 296
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRG-MSPGGRTYDT----------LVEAYCLKGE 248
++ +I + EA ++F +ML G + P TY + LVE +
Sbjct: 297 SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQL 356
Query: 249 FSKVFHLQDEVIQKGFLPYYVTS---------FSPSLV------TYNALIHGLCFFQRPD 293
SK H ++E++ L Y S F LV ++N++I
Sbjct: 357 ISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGK 416
Query: 294 EALEILRGMPEMLLDPDEVSY 314
EA+E+ M + P V+Y
Sbjct: 417 EAIEMYNQMRKHGFKPSAVTY 437
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/476 (20%), Positives = 200/476 (42%), Gaps = 96/476 (20%)
Query: 61 VIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMC 120
+I LC G+I EA + + + D VT+ +I+ Y+++ ++
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITG-------------YIKLGDMRE--- 95
Query: 121 VREL------SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
REL N T+ M+ + ++ A + + M E+ + S++ +I +
Sbjct: 96 ARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYA 151
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
++ + KALE+ EM ++ I ++ +++ L + R+ EA +LF+ M R +
Sbjct: 152 QSGRIDKALELFDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRRDVV---- 203
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
++ +V+ G+ + L D + ++ +++++NA+I G R DE
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPER------------NIISWNAMITGYAQNNRIDE 251
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
A ++ + MPE D S++ +I+GF R RE+ KA L M +K
Sbjct: 252 ADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVI----------- 296
Query: 355 VKDLSNHDTFSSLVNDYCAEDKAEMAL----KLRYQAQYLPDSVSYCLLLNGLHKKATSR 410
++++++ Y + E AL K+ P+ +Y +L+ A
Sbjct: 297 --------SWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG-- 346
Query: 411 FAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRM--RGLVNEAARAR 468
+ + +++ + + I+ L+ N + EL+ +M GLV + R
Sbjct: 347 LVEGQQIHQLISKSVHQKNEIVTSALL-----NMYSKSGELIAARKMFDNGLVCQ----R 397
Query: 469 DTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKA 524
D + +N +I + G+ +A +MY +M +GF + L L+ A
Sbjct: 398 DLI----------SWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFA 443
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 125/274 (45%), Gaps = 36/274 (13%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSI 107
+ + K +V++ A++ ++ AE + QEM + + V++NT+I ++ +
Sbjct: 102 RVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGR------ 155
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
+ +EL+ +M R N ++ M++ R R++EA+ + M + + S++
Sbjct: 156 -IDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV----SWT 206
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
++ KN ++ +A + M ++ I ++ +I R+ EA LFQ M R
Sbjct: 207 AMVDGLAKNGKVDEARRLFDCMPERNII----SWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
+ +++T++ + E +K L D + +K +++++ +I G
Sbjct: 263 DFA----SWNTMITGFIRNREMNKACGLFDRMPEK------------NVISWTTMITGYV 306
Query: 288 FFQRPDEALEILRGM-PEMLLDPDEVSYSAVISG 320
+ +EAL + M + + P+ +Y +++S
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%), Gaps = 16/254 (6%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D +TY+T+I+ A K NL Y + +E + +M L P+E TY ++ ++ +V
Sbjct: 220 DNITYSTIITCA----KRCNL---YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKV 272
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
EE + + G P A ++S + F + + + EM + P+V Y L
Sbjct: 273 EEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTL 332
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
++ + + AR LF EML G++P +T LV+ Y L +E+ K
Sbjct: 333 LEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK-- 390
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL-DPDEVSYSAVISGFRR 323
+ + YN L++ +EA + M E + PD SY+A+++ +
Sbjct: 391 ------KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGS 444
Query: 324 IRELRKAFELKLEM 337
+ KA EL EM
Sbjct: 445 GGKAEKAMELFEEM 458
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 26/268 (9%)
Query: 154 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 213
M + G+ +YS II+ + KA+E M G+ PD Y ++ + +
Sbjct: 212 MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGK 271
Query: 214 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 273
+ E L++ + G P + L + + G++ + ++ E+
Sbjct: 272 VEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKS--------MDVK 323
Query: 274 PSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
P++V YN L+ + +P A + M E L P+E + +A++ + + R R A +L
Sbjct: 324 PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQL 383
Query: 334 KLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALK-LRYQAQYLPD 392
EM K+ WP+ D ++T ++ D E++AE ++ Q PD
Sbjct: 384 WEEMKAKK--WPM----------DFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPD 431
Query: 393 SVSYCLLLN-----GLHKKATSRFAKRL 415
+ SY +LN G +KA F + L
Sbjct: 432 NFSYTAMLNIYGSGGKAEKAMELFEEML 459
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 11/213 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAE----TVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+ + ++ L G+ REAE T L++ + D V YNTLI A EA K S
Sbjct: 740 VTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCAS----- 794
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
E+Y +M + + TY MI ++ ++++A+ I GL Y+ +I
Sbjct: 795 --EIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIM 852
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ K +M +AL + EM KGI P +Y +++++ R E +L Q M G
Sbjct: 853 HYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCT 912
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
TY TL++ Y +F++ V +KG
Sbjct: 913 DLSTYLTLIQVYAESSQFAEAEKTITLVKEKGI 945
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 162/407 (39%), Gaps = 42/407 (10%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYH 117
+ ++ C EG + EA+ ++ +M V N + E+ N + ++ +
Sbjct: 540 YKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNV-S 598
Query: 118 QMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNK 177
Q+ V L M+ L + E IL LM + L A +R+IS F +
Sbjct: 599 QLDVMALG-------LMLNLRLKEGNLNETKAILNLMFKTDLGSSA--VNRVISSFVREG 649
Query: 178 EMGKALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS--PGGR 234
++ KA EM +++ + G+ + LI + Q +L EA+ L+ L G S PG
Sbjct: 650 DVSKA-EMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLY---LAAGESKTPGKS 705
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
++++AY G + L E +KG P VT + L++ L + E
Sbjct: 706 VIRSMIDAYVRCGWLEDAYGLFMESAEKG--------CDPGAVTISILVNALTNRGKHRE 757
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESL 354
A I R E ++ D V Y+ +I +L+ A E+ M +
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMH------------TSGV 805
Query: 355 VKDLSNHDTFSSLVNDYCAEDKA-EMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAK 413
+ ++T S+ DKA E+ R YL + + ++ +H + ++
Sbjct: 806 PCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMI---MHYGKGGKMSE 862
Query: 414 RLLLFYIVAHCLTIPSYIIYDILIEKCANNEF-KSVVELVKGFRMRG 459
L LF + P Y+++++ CA + V EL++ G
Sbjct: 863 ALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNG 909
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 128/287 (44%), Gaps = 21/287 (7%)
Query: 57 SFNAVIKRLCGEGRIREAETVL---QEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+F ++ LC G I +AE + +++ D +N +++ C N+
Sbjct: 226 AFQGLLCALCRHGHIEKAEEFMLASKKLFPVDVEGFNVILNGWC------NIWTDVTEAK 279
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
++ +M ++PN+ +Y MI F + +++ + M ++GL+P + Y+ ++
Sbjct: 280 RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVL 339
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+ +A+++ ++ ++G+ PD Y +I+ LC +L AR++ M+ +SP
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTV 399
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
T+ +EA F K + ++ ++ P+ T+ ++ L ++P+
Sbjct: 400 DTFHAFLEAV----NFEKTLEVLGQM--------KISDLGPTEETFLLILGKLFKGKQPE 447
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
AL+I M + + Y A I G L KA E+ EM K
Sbjct: 448 NALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSK 494
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
V EA I R M ++P+ DSYS +IS F K + +L + EM +G+ P + Y
Sbjct: 275 VTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNS 334
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
L+ +L + EA L +++ G+ P TY++++ C G+ ++ +I +
Sbjct: 335 LVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISE- 393
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
+ SP++ T++A + + F ++ LE+L M L P E ++ ++ +
Sbjct: 394 -------NLSPTVDTFHAFLEAVNF----EKTLEVLGQMKISDLGPTEETFLLILGKLFK 442
Query: 324 IRELRKAFELKLEMDQKE 341
++ A ++ EMD+ E
Sbjct: 443 GKQPENALKIWAEMDRFE 460
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
Y +I C + +EA I + GL P +Y+ +I RF +G+A ++ EM+
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RF---SSLGRAEKLYAEMI 72
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
+G+ PD Y +I LC Q +L +AR + S T++TL+ YC
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVK 123
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 310
+L E+ ++G + +++TY LIHG + AL+I + M +
Sbjct: 124 DGMNLFCEMYRRGIV--------ANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSS 175
Query: 311 EVSYSAVISGFRRIRELRKAFELKLE 336
+++ ++ +ELRKA + L+
Sbjct: 176 SITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 21/188 (11%)
Query: 150 ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLC 209
+ ++M E + Y+ II CK + +A + +L G+ PDV Y ++I+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 210 HQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYV 269
L A L+ EM+ RG+ P TY++++ C + + ++ +
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV-------------- 102
Query: 270 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRK 329
S S T+N LI+G C R + + + M + + ++Y+ +I GFR++ +
Sbjct: 103 ---SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNT 159
Query: 330 AFELKLEM 337
A ++ EM
Sbjct: 160 ALDIFQEM 167
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 20/188 (10%)
Query: 83 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
D D YN +I C+A K + ++ + + L P+ TY MIR F
Sbjct: 11 DMDTAGYNIIIHGLCKAGK-------FDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG 62
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
R E+ + M +GL P +Y+ +I CK ++ +A + + +
Sbjct: 63 RAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCSTFN 110
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
LI C R+ + +LF EM RG+ TY TL+ + G+F+ + E++
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 263 GFLPYYVT 270
G +T
Sbjct: 171 GVYSSSIT 178
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLI--SAACEAEK------NHN 104
+N +I LC G+ EA + + PD TYN +I S+ AEK
Sbjct: 16 GYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRG 75
Query: 105 LSIPYVRIVELYHQMC-------VRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK 157
L + + H +C R++S + +T+ +I +C RV++ + + M +
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRR 135
Query: 158 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 217
G+ + +Y+ +I F + + AL++ EM+ G++ + ++ LC ++ L +A
Sbjct: 136 GIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKA 195
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 25/191 (13%)
Query: 279 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 338
YN +IHGLC + DEA I + L PD +Y+ +I R L +A +L EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 339 QKETCWPLDQDTNESLVKDLSNHD-------------TFSSLVNDYCAEDKAEMALKL-- 383
++ P D T S++ L + TF++L+N YC + + + L
Sbjct: 73 RRGLV-P-DTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFC 130
Query: 384 -RYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFY-IVAHCLTIPSYIIYDILIEKCA 441
Y+ + + ++Y L++G + F L +F +V++ + S DIL + C+
Sbjct: 131 EMYRRGIVANVITYTTLIHGFRQ--VGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCS 188
Query: 442 NNEFKSVVELV 452
E + V ++
Sbjct: 189 RKELRKAVAML 199
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 21/301 (6%)
Query: 44 FAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEA 99
F A K S+N +I G + E E VL+EM + PDC++Y+ LI
Sbjct: 244 FNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRT 303
Query: 100 EKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGL 159
+ ++ VE++ + + P+ Y MI F +E++ R M ++
Sbjct: 304 GRIND-------SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEEC 356
Query: 160 SPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARD 219
P+ ++YS+++S K +++ ALE+ EML +G+ P ++ LC A
Sbjct: 357 EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMV 416
Query: 220 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV-T 278
++Q+ G Y L++ G+ + ++ DE+ + G+ PS V
Sbjct: 417 IYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY---------PSDVEV 467
Query: 279 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 338
Y ++ GLC + A+ ++ P+ YS + S + A++L L++
Sbjct: 468 YEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIK 527
Query: 339 Q 339
+
Sbjct: 528 K 528
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 134/339 (39%), Gaps = 37/339 (10%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDP---DCVTYNTLISAACEAEKNHN 104
K +TE SFNA+++ LC + A++V D +YN +IS + +
Sbjct: 218 KCSTE----SFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEE 273
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
+ ++ +M P+ +Y +I R+ ++V I + KG P A+
Sbjct: 274 ME-------KVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
Y+ +I F ++ +++ MLD+ P++ Y L+ L R++ +A ++F+EM
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 225 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 284
L RG+ P + ++ C G + + + G S S Y L+
Sbjct: 387 LSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAG------CRISES--AYKLLLK 438
Query: 285 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 344
L F + L + M E D Y ++ G I L A + E +K C
Sbjct: 439 RLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFC- 497
Query: 345 PLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
N +S L + A +K E+A KL
Sbjct: 498 --------------PNRFVYSRLSSKLMASNKTELAYKL 522
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 117/271 (43%), Gaps = 28/271 (10%)
Query: 116 YHQMCVRE--LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+ VRE ++ + +Y ++R R + +L+ M +G++P + + + F
Sbjct: 137 FFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSF 196
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+ + +A+E+ E G+ ++ L++ LC + + A+ +F +G P
Sbjct: 197 VRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAK--KGNIPFD 254
Query: 234 R-TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
+Y+ ++ + GE ++ + E+++ G F P ++Y+ LI GL R
Sbjct: 255 SCSYNIMISGWSKLGEVEEMEKVLKEMVESG--------FGPDCLSYSHLIEGLGRTGRI 306
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNE 352
++++EI + PD Y+A+I F R+ ++ M +E C P
Sbjct: 307 NDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEE-CEP------- 358
Query: 353 SLVKDLSNHDTFSSLVNDYCAEDKAEMALKL 383
N +T+S LV+ K AL++
Sbjct: 359 -------NLETYSKLVSGLIKGRKVSDALEI 382
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
+ P+E TYR MI+ FCD + EA + LM ++G ++ +I+ K + +A
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEAS 270
Query: 184 EMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 242
++ M+ K G D Y ++I LC R+ AR +F EM RG+ T+ +L+
Sbjct: 271 KVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYG 330
Query: 243 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 302
+K + + L + V +P + Y+ LI GL +R EA E+ R M
Sbjct: 331 LLVKRRVVEAYGLVEGVE------------NPDISIYHGLIKGLVKIKRASEATEVFRKM 378
Query: 303 PEMLLDPDEVSYSAVISG 320
+ +P +Y ++ G
Sbjct: 379 IQRGCEPIMHTYLMLLQG 396
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 20/243 (8%)
Query: 71 IREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR--ELSPNE 128
+R E + Q T V++N L++A C KN + ++ +L+ ++ R ++ P++
Sbjct: 122 MRTFEQMDQYGTPRSAVSFNALLNA-CLHSKN------FDKVPQLFDEIPQRYNKIIPDK 174
Query: 129 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 188
+Y +I+ +CD E+A+ I+R M KG+ +++ I+S K E+ A + E
Sbjct: 175 ISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNE 234
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLE-ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
M+ KG D AY ++++ Q+ E ++L +EM G+ P +Y+ L+ AYC +G
Sbjct: 235 MVKKGCELDNAAYN--VRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERG 292
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLL 307
+ DE +K + + +P+ T+ LI LC+ + ++ I + M
Sbjct: 293 -------MLDEA-KKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHK 344
Query: 308 DPD 310
PD
Sbjct: 345 IPD 347
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 11/196 (5%)
Query: 128 ETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 187
E Y +IR + + A+ M + G A S++ +++ +K K ++
Sbjct: 102 EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFD 161
Query: 188 EMLDK--GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
E+ + I PD +YG+LI+ C +A ++ ++M +GM + T++ +
Sbjct: 162 EIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYK 221
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
KGE +L +E+++KG YN I + P+ E++ M M
Sbjct: 222 KGELEVADNLWNEMVKKGC--------ELDNAAYNVRIMS-AQKESPERVKELIEEMSSM 272
Query: 306 LLDPDEVSYSAVISGF 321
L PD +SY+ +++ +
Sbjct: 273 GLKPDTISYNYLMTAY 288
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 178/429 (41%), Gaps = 53/429 (12%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKG---LSPHADSYSRIISRFCKNKEMGKALEMK 186
Y+ M+++ + G++ M ++ + P + + ++ RF + KA+E+
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEP--ELFVVLVQRFASADMVKKAIEVL 206
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
EM G PD + +G L+ LC + +A LF++M +R R + +L+ +C
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRV 265
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G+ + ++ ++ + G F P +V Y L+ G + +A ++LR M
Sbjct: 266 GKMMEAKYVLVQMNEAG--------FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 366
+P+ Y+ +I ++ + +A ++ +EM++ E ++ T+++
Sbjct: 318 FEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYEC---------------EADVVTYTA 362
Query: 367 LVNDYCAE---DKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAH 423
LV+ +C DK + L + +P ++Y ++ KK + F + L L +
Sbjct: 363 LVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKES--FEECLELMEKMRQ 420
Query: 424 CLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVY 483
P IY+++I G V EA R + M P +
Sbjct: 421 IEYHPDIGIYNVVIRLACK---------------LGEVKEAVRLWNEMEENGLSPGVDTF 465
Query: 484 NLLIFDHCIGGNVHKAYDMYKEMLHYG-FVCHMFSVLALIKALYCDERYNEMS---WVIR 539
++I G + +A D +KEM+ G F + L L+ ++ EM+ W
Sbjct: 466 VIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCI 525
Query: 540 NTLRSCNLN 548
+ +C LN
Sbjct: 526 TSKGACELN 534
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 42/263 (15%)
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA----------------------- 147
+ +E+ +M P+E + C++ C V++A
Sbjct: 201 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLY 260
Query: 148 ----VG-------ILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFP 196
VG +L M E G P Y+ ++S + +M A ++ +M +G P
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
+ + Y +LIQ LC R+ EA +F EM TY LV +C G+ K + +
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
D++I+KG + PS +TY ++ + +E LE++ M ++ PD Y+
Sbjct: 381 DDMIKKGLM--------PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 317 VISGFRRIRELRKAFELKLEMDQ 339
VI ++ E+++A L EM++
Sbjct: 433 VIRLACKLGEVKEAVRLWNEMEE 455
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 116/267 (43%), Gaps = 18/267 (6%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDCVT---YNTLISAACEAEKNHNLSIPYVRIVE 114
F ++ LC G +++A + ++M V + +L+ C K + YV +
Sbjct: 221 FGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKM--MEAKYVLV-- 276
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
QM P+ Y ++ + + ++ +A +LR M +G P+A+ Y+ +I C
Sbjct: 277 ---QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALC 333
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K M +A+++ VEM DV Y L+ C ++ + + +M+ +G+ P
Sbjct: 334 KVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSEL 393
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
TY ++ A+ K F + L +++ Q + P + YN +I C E
Sbjct: 394 TYMHIMVAHEKKESFEECLELMEKMRQ--------IEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGF 321
A+ + M E L P ++ +I+G
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGL 472
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 46/229 (20%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
F +++ C G++ EA+ VL +M + PD V Y L+S A K ++ Y
Sbjct: 255 FTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGK---MADAY---- 307
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+L M R PN Y +I+ C +R+EEA+ + M +Y+ ++S F
Sbjct: 308 DLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGF 367
Query: 174 CKNKEMGKALEMKVEMLDKGIFP-----------------------------------DV 198
CK ++ K + +M+ KG+ P D+
Sbjct: 368 CKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDI 427
Query: 199 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
Y ++I+L C + EA L+ EM G+SPG T+ ++ +G
Sbjct: 428 GIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 7/208 (3%)
Query: 58 FNAVIKRLCGEGRI-REAETVLQEM-----TDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
+N +I+ CG + A V +M + PD TY L+S+ + N+ Y+
Sbjct: 146 YNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLH 205
Query: 112 IV-ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
V L QM + P+ +I+ + V+EA+ + + MA G P+A +YS ++
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
C+ +G+ L EM KG+ P+ Y +LI L +RRL EA ++ +ML +S
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDE 258
P TY+T++ C G S+ + +E
Sbjct: 326 PDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 29/265 (10%)
Query: 89 YNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDR----NRV 144
Y+T+I A ++N+ + ++ +M V Y C+IR C R NR
Sbjct: 111 YHTMIKQAITGKRNNFVETLIEEVIAGACEMSV-------PLYNCIIRFCCGRKFLFNRA 163
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCK--NK------EMGKALEMKVEMLDKGIFP 196
+ +++ P ++Y+ ++S K NK + + +M G+ P
Sbjct: 164 FDVYN--KMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIP 221
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
D ++I+ + EA +F+EM L G P TY LV+ C KG +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
E+ KG +P + Y LI L +R DEA+E++ M L PD ++Y+
Sbjct: 282 KEMQVKGMVP--------NGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 317 VISGFRRIRELRKAFELKLEMDQKE 341
V++ R +A E+ E +++
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRD 358
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
PD N +I A + + + ++ +M + PN TY +++ C++ R
Sbjct: 221 PDTFVLNMIIKAYAKC-------LEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGR 273
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
V + +G + M KG+ P+ Y +I + + +A+E+ +ML + PD+ Y
Sbjct: 274 VGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
++ LC R EA ++ +E R G R Y TL++
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 117/256 (45%), Gaps = 27/256 (10%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDPDCVT----YNTLISAACEAEKNHNLSIPYVRI 112
+++ +IK+ R ET+++E+ C YN +I C + N R
Sbjct: 110 AYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFN------RA 163
Query: 113 VELYHQMCVRELS-PNETTYRCMIRLFCDR-NRVE------EAV-GILRLMAEKGLSPHA 163
++Y++M + S P+ TY ++ R N++ AV + + M G+ P
Sbjct: 164 FDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDT 223
Query: 164 DSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
+ II + K E+ +A+ + EM G P+ + Y L++ +C + R+ + ++E
Sbjct: 224 FVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKE 283
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI 283
M ++GM P G Y L+ + ++ + + +++ S SP ++TYN ++
Sbjct: 284 MQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDML--------ANSLSPDMLTYNTVL 335
Query: 284 HGLCFFQRPDEALEIL 299
LC R EALE++
Sbjct: 336 TELCRGGRGSEALEMV 351
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 130/311 (41%), Gaps = 23/311 (7%)
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
+ AV L M G P + S++ C++ + ++ + KG F ++ +Y L+
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
I LC R+ E+ QEM G++P Y+ L+EA C L DE+
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM----- 458
Query: 265 LPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
+V +L TYN LI L +E+L + M E ++PDE Y ++I G
Sbjct: 459 ---FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEG---- 511
Query: 325 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 384
L K +++ M+ C D T V S V + C+ + A +L
Sbjct: 512 --LCKETKIEAAMEVFRKCMERDHKTVTRRV--------LSEFVLNLCSNGHSGEASQLL 561
Query: 385 YQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNE 444
+ ++L + ++ +LL + R + +I ++ I D+L C++++
Sbjct: 562 REREHLEHTGAHVVLLKCVADAKEVEIGIRHMQ-WIKEVSPSLVHTISSDLLASFCSSSD 620
Query: 445 FKSVVELVKGF 455
S++ ++
Sbjct: 621 PDSILPFIRAI 631
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
L S++ +I LC GR+RE+ T LQEM PD YN LI A C+AE +
Sbjct: 397 LQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAE--------MI 448
Query: 111 RIV-ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
R +L+ +M V N TTY +IR + EE++ + M E+G+ P Y +
Sbjct: 449 RPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSL 508
Query: 170 ISRFCKNKEMGKALEM 185
I CK ++ A+E+
Sbjct: 509 IEGLCKETKIEAAMEV 524
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 8/175 (4%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
P T + + C ++ + + L++ KG SYS +IS CK + ++
Sbjct: 360 PAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTA 419
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
EM +G+ PDV Y LI+ C + A+ L+ EM + G TY+ L+
Sbjct: 420 LQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSE 479
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 300
+GE + L D+++++G P Y +LI GLC + + A+E+ R
Sbjct: 480 EGEAEESLRLFDKMLERG--------IEPDETIYMSLIEGLCKETKIEAAMEVFR 526
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/470 (18%), Positives = 171/470 (36%), Gaps = 72/470 (15%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D ++Y+++ K+ +LS + + L+ Q+ ++ + + YR +I +
Sbjct: 81 DSISYHSIF-------KSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKA 133
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
+ A +L G H D +R+++ + A ++ V+M KG+ + +G+
Sbjct: 134 QSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVY 193
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV-EAYCLKGEFSKVFHLQDEVIQKG 263
I C + L E+ ++ G L+ + C F++ +E+
Sbjct: 194 IGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRN-- 251
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
P + Y + E +L+ ++ + P Y A I
Sbjct: 252 ------IDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLIS 305
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD--------------------- 362
+ L +A E+ + + +P+D D ++L+ +S D
Sbjct: 306 AKRLTEAKEVAEVIVSGK--FPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIR 363
Query: 363 TFSSLVNDYCAEDKAEMALK---LRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFY 419
T S L + C DK++ +K L Y + SY L+++ L K A R+ Y
Sbjct: 364 TLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCK------AGRVRESY 417
Query: 420 IVAHCLT----IPSYIIYDILIEKCANNEF---------KSVVE-----------LVKGF 455
+ P +Y+ LIE C E + VE L++
Sbjct: 418 TALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKL 477
Query: 456 RMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 505
G E+ R D ML R P+ +Y LI C + A +++++
Sbjct: 478 SEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRK 527
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 144/344 (41%), Gaps = 56/344 (16%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEK--------- 101
LV++N++I REA +++EM + P+ V+Y+TL+S E K
Sbjct: 260 LVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFA 319
Query: 102 -----NHNLSIPYVRI-VELYHQM-CVRE------------LSPNETTYRCMIRLFCDRN 142
N L + I +++Y Q+ V+E + PN +Y ++R++ +
Sbjct: 320 EMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE 379
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
EA+ + RLM K + + +Y+ +I + K E KA + EM +GI P+ Y
Sbjct: 380 LFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYS 439
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAY---CLKGEFSKVFH---LQ 256
+I + +L A LFQ++ G+ Y T++ AY L G ++ H L
Sbjct: 440 TIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLP 499
Query: 257 DEVIQKG-----------------FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 299
D + ++ F + + + + +I+ QR +E+
Sbjct: 500 DNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVF 559
Query: 300 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETC 343
M PD + V++ + + RE KA + EM Q+E C
Sbjct: 560 EKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM-QEEGC 602
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 164/415 (39%), Gaps = 87/415 (20%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAA---CEAEKNHNLSIPY 109
+++ +I EG A + LQ+M D V Y+ LI + C+ Y
Sbjct: 192 TYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCD----------Y 241
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
+ + ++ ++ ++P+ Y MI ++ EA +++ M E G+ P+ SYS +
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 170 ISRFCKNKEMGKALEMKVEM------LD-----------------------------KGI 194
+S + +N + +AL + EM LD I
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 195 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 254
P+V +Y ++++ EA LF+ M + + TY+T+++ Y E K +
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 421
Query: 255 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 314
L E+ +G P+ +TY+ +I + D A + + + ++ D+V Y
Sbjct: 422 LVQEMQSRG--------IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 315 SAVISGFRRIREL----RKAFELKLEMD---------------QKETCWPLDQDTNESLV 355
+I + R+ + R ELKL + +E W Q V
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEV 533
Query: 356 KDLSNHDTFSSLVNDYCAEDK----AEMALKLRYQAQYLPDSVSYCLLLNGLHKK 406
KD+S F ++N Y + E+ K+R A Y PDS ++LN K+
Sbjct: 534 KDIS---VFGCMINLYSRNQRYVNVIEVFEKMR-TAGYFPDSNVIAMVLNAYGKQ 584
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 148/382 (38%), Gaps = 66/382 (17%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P YN ++ A++ I + L+ +M R L+P+ TY +I F
Sbjct: 153 PSVFAYNVVLRNVLRAKQ---FDIAH----GLFDEMRQRALAPDRYTYSTLITSFGKEGM 205
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIIS---RFCKNKEMGKALEMKVEMLDKGIFPDVHA 200
+ A+ L+ M + +S YS +I R C + KA+ + + GI PD+ A
Sbjct: 206 FDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC---DYSKAISIFSRLKRSGITPDLVA 262
Query: 201 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK---VFHLQD 257
Y +I + + EAR L +EM G+ P +Y TL+ Y +F + VF
Sbjct: 263 YNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMK 322
Query: 258 EV------------------------IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPD 293
EV + F P++V+YN ++ +
Sbjct: 323 EVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFG 382
Query: 294 EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNES 353
EA+ + R M ++ + V+Y+ +I + + E KA L EM Q P
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEM-QSRGIEP-------- 433
Query: 354 LVKDLSNHDTFSSLVNDYCAEDKAEMAL----KLRYQAQYLPDSVSYCLLLNGLHKKATS 409
N T+S++++ + K + A KLR + D V Y ++ +
Sbjct: 434 ------NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI-DQVLYQTMIVAYERVGLM 486
Query: 410 RFAKRLLLFYIVAHCLTIPSYI 431
AKRLL H L +P I
Sbjct: 487 GHAKRLL------HELKLPDNI 502
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 130/288 (45%), Gaps = 21/288 (7%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREA----ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSI 107
E L +F A+I G++ +A + + PD V +N LISA + S
Sbjct: 534 EANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ-------SG 586
Query: 108 PYVRIVELYHQMCVRE--LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADS 165
R ++ +M + P+ + +++ C+ +VE A + +++ + G+ +
Sbjct: 587 AVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEV 646
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
Y+ ++ K+ + A + +M +K + PD + LI + H + L EA + Q+
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
+G+ G +Y +L+ A C ++ K L +++ P++ T NALI
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS--------IKLRPTISTMNALITA 758
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
LC + +A+E L + + L P+ ++YS ++ R + +F+L
Sbjct: 759 LCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKL 806
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 100/248 (40%), Gaps = 34/248 (13%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT------DPDCVTYNTLISAACEAEKN------- 102
V FNA+I G + A VL EM DPD ++ L+ A C A +
Sbjct: 573 VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVY 632
Query: 103 ---HNLSI---PYVRIV---------------ELYHQMCVRELSPNETTYRCMIRLFCDR 141
H I P V + +Y M ++++P+E + +I +
Sbjct: 633 QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
++EA GIL+ +G+ SYS ++ C K+ KALE+ ++ + P +
Sbjct: 693 KMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTM 752
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
LI LC +L +A + E+ G+ P TY L+ A K +F F L +
Sbjct: 753 NALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKG 812
Query: 262 KGFLPYYV 269
G P +
Sbjct: 813 DGVSPNLI 820
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 128/309 (41%), Gaps = 55/309 (17%)
Query: 64 RLCGEGRIREAETVLQEMTDPDCVTYNTLISA----ACEAEKNHNLSIPYVRIVELYHQM 119
RL +GRI++ ++L+++ D + + + A AC+ ++ + + +++
Sbjct: 409 RLLRDGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFRFTKLI------ 462
Query: 120 CVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEM 179
L+P +T+ ++ + +E A G+LRL+ E G++ Y+ +IS K+ ++
Sbjct: 463 ----LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKV 518
Query: 180 GKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTL 239
E+ +M + G+ ++H +G LI ++ +A + + + + P ++ L
Sbjct: 519 DAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 578
Query: 240 VEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI- 298
+ A G + F + E + P ++ AL+ C + + A E+
Sbjct: 579 ISACGQSGAVDRAFDVLAE------MKAETHPIDPDHISIGALMKACCNAGQVERAKEVY 632
Query: 299 -------LRGMPEML---------------------------LDPDEVSYSAVISGFRRI 324
+RG PE+ + PDEV +SA+I
Sbjct: 633 QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Query: 325 RELRKAFEL 333
+ L +AF +
Sbjct: 693 KMLDEAFGI 701
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 146/354 (41%), Gaps = 49/354 (13%)
Query: 53 KCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
K +VS+N++IK G + A + +M D D +++NT+I YV +
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDG-------------YVHV 325
Query: 113 VELYHQMCVRELSPNET--TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ + PN ++ M+ + VE A R EK H S++ II
Sbjct: 326 SRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELA----RHYFEKTPEKHTVSWNSII 381
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ--EMLLRG 228
+ + KNK+ +A+++ + M +G PD H L LL L+ R Q +++++
Sbjct: 382 AAYEKNKDYKEAVDLFIRMNIEGEKPDPHT---LTSLLSASTGLVNLRLGMQMHQIVVKT 438
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 288
+ P ++ L+ Y GE + + DE+ K ++T+NA+I G F
Sbjct: 439 VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLK-----------REVITWNAMIGGYAF 487
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQ 348
EAL + M + P +++ +V++ + +A + M
Sbjct: 488 HGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSM----------- 536
Query: 349 DTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNG 402
S+ K + +SSLVN + + E A+ + + PD + LL+
Sbjct: 537 ---MSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDA 587
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 126/292 (43%), Gaps = 25/292 (8%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
V++N +I + +A + M D VT+NT+IS +S +R +E
Sbjct: 72 VTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGY--------VSCGGIRFLEE 123
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
++ S + ++ MI + R+ EA+ + M E+ +A S+S +I+ FC+
Sbjct: 124 ARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQ 179
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM--LLRGMSPGG 233
N E+ A V + K D L+ L RL EA + + L+ G
Sbjct: 180 NGEVDSA----VVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLV 235
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQ---KGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
Y+TL+ Y +G+ L D++ + F ++V++N++I + +
Sbjct: 236 YAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK--AYLK 293
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKET 342
D + R + + + D D +S++ +I G+ + + AF L EM ++
Sbjct: 294 VGD--VVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDA 343
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
EL+ + + PN +Y +++ FC + + A + M E+ + P DSY +I F
Sbjct: 176 ELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGF 235
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
C+ ++ A+E+ +ML+KG PD LI LC Q E + +EM+ +G SP
Sbjct: 236 CRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHF 291
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
+ LV+ +C G+ + + + V++ G
Sbjct: 292 SVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 24/190 (12%)
Query: 134 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE-MGKALEMKVEMLDK 192
+I+++ + E+ + M E +P +RI+ ++ + KA E+
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 193 GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV 252
G+ P+ +Y LL+Q C L A LF +ML R + P +Y L++ +C KG+ +
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 253 FHLQDEVIQKGFLP-----------------------YYVTSFSPSLVTYNALIHGLCFF 289
L D+++ KGF+P FSP N L+ G C F
Sbjct: 245 MELLDDMLNKGFVPDRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSF 304
Query: 290 QRPDEALEIL 299
+ +EA +++
Sbjct: 305 GKVEEACDVV 314
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 12/177 (6%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P+ +YN L+ A C N +LSI Y +L+ +M R++ P+ +Y+ +I+ FC + +
Sbjct: 188 PNTRSYNLLMQAFC---LNDDLSIAY----QLFGKMLERDVVPDVDSYKILIQGFCRKGQ 240
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
V A+ +L M KG P +I C + + EM+ KG P
Sbjct: 241 VNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 296
Query: 204 LIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV-FHLQDEV 259
L++ C ++ EA D+ + ++ G + T++ ++ C + E K+ L+D V
Sbjct: 297 LVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAV 353
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELY 116
S+ +I+ C +G++ A +L +M + V TLI C+ + + Y+
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRTLIGGLCD-QGMFDEGKKYL------ 279
Query: 117 HQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 176
+M + SP+ + C+++ FC +VEEA ++ ++ + G + H+D++ +I C
Sbjct: 280 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE 339
Query: 177 KEMGK 181
E K
Sbjct: 340 DESEK 344
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 108/218 (49%), Gaps = 24/218 (11%)
Query: 86 CVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVR--ELSPNETTYRCMIRLFCDRNR 143
V++N L++A ++ + R+ +L+ + R ++P++ +Y +I+ +CD +
Sbjct: 137 VVSFNALLAACLHSDL-------FERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGK 189
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGL 203
E+A+ I+R M KG+ +++ I+ KN + +A + +EM++KG D Y
Sbjct: 190 PEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYN- 248
Query: 204 LIQLLCHQRRLLE-ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
++L+ + E ++L +EM G+ P +Y+ L+ AYC+KG S+ + + + Q
Sbjct: 249 -VRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQ- 306
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 300
P+ T+ LI LC D+ L + +
Sbjct: 307 -----------PNAATFRTLIFHLCINGLYDQGLTVFK 333
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 97/228 (42%), Gaps = 15/228 (6%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLF-------CDRNRVEEAVGILRLMAEKGLSPHADS 165
+E+Y + PN +Y ++ F R V +L M +KGL P
Sbjct: 401 LEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRH 460
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
++ ++ K E A+++ M+D G P V +YG L+ L + EA ++ M+
Sbjct: 461 WNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI 520
Query: 226 LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
G+ P Y T+ + +F+ + L E+ KG PS+VT+NA+I G
Sbjct: 521 KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGI--------EPSVVTFNAVISG 572
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
A E M ++P+E++Y +I + R A+EL
Sbjct: 573 CARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 22/231 (9%)
Query: 75 ETVLQEMTDPDCVTY-------NTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPN 127
E +L E +P+ ++Y N L+SAA + + V L ++M + L P
Sbjct: 405 EDLLDEGPEPNNLSYELVVSHFNILLSAASKRG-------IWRWGVRLLNKMEDKGLKPQ 457
Query: 128 ETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 187
+ ++ + A+ I + M + G P SY ++S K K +A +
Sbjct: 458 RRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWN 517
Query: 188 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
M+ GI P+++AY + +L Q++ L +EM +G+ P T++ ++ C +
Sbjct: 518 HMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISG-CARN 576
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 298
S V + + F + P+ +TY LI L +P A E+
Sbjct: 577 GLSGVAY-------EWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 11/189 (5%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
+NAV+ A + + M D P ++Y L+SA + + Y
Sbjct: 461 WNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKL-------YDEAF 513
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
+++ M + PN Y M + + + +L+ MA KG+ P +++ +IS
Sbjct: 514 RVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGC 573
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
+N G A E M + + P+ Y +LI+ L + + A +L + G+
Sbjct: 574 ARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSS 633
Query: 234 RTYDTLVEA 242
+ YD +V++
Sbjct: 634 KPYDAVVKS 642
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 136/330 (41%), Gaps = 55/330 (16%)
Query: 46 AGKATTEKCLVSFNAVIKRLCGEGRIREAETVL---QEMTDPDCVTYNTLISAACEAEKN 102
AG ++E + +A +R G + EAE V QE+ + YN +I A
Sbjct: 466 AGNMSSEGYSANIDAYGER----GYLSEAERVFICCQEVNKRTVIEYNVMIKA------- 514
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
+ +S + EL+ M ++P++ TY ++++ + + L M E G
Sbjct: 515 YGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSD 574
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
Y +IS F K ++ A E+ EM++ I PDV YG+LI + +A +
Sbjct: 575 CIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVE 634
Query: 223 EMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD-EVIQKGFLPYYVTSFSPSLVTYNA 281
M G+ Y++L++ Y +KV +L + E I + L + P + T N
Sbjct: 635 AMKEAGIPGNSVIYNSLIKLY------TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNC 688
Query: 282 LIH-------------------------------GLCFFQ---RPDEALEILRGMPEMLL 307
+I+ LC ++ R +EA +I + M EM +
Sbjct: 689 MINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKI 748
Query: 308 DPDEVSYSAVISGFRRIRELRKAFELKLEM 337
D +SY++V+ F ++A E EM
Sbjct: 749 LTDPLSYNSVLGLFALDGRFKEAVETFKEM 778
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 127/323 (39%), Gaps = 43/323 (13%)
Query: 48 KATTEKCLVSF--NAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEK 101
KA + CL S+ N +I G+I+EA + M + P VT+NT+I
Sbjct: 289 KADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYG---N 345
Query: 102 NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSP 161
N L + L M + +P+ TY +I L N +E A + M + GL P
Sbjct: 346 NGQLG----EVTSLMKTMKLH-CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKP 400
Query: 162 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 221
SY ++ F + +A + EM D + D + L ++ L ++ F
Sbjct: 401 DPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWF 460
Query: 222 QEMLLRG-MSPGGRTYDTLVEAYCLKG---EFSKVFHLQDEVIQKGFLPYYVT------- 270
+ + G MS G Y ++AY +G E +VF EV ++ + Y V
Sbjct: 461 KRFHVAGNMSSEG--YSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGIS 518
Query: 271 ----------------SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 314
+P TYN L+ L P + L M E D + Y
Sbjct: 519 KSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPY 578
Query: 315 SAVISGFRRIRELRKAFELKLEM 337
AVIS F ++ +L A E+ EM
Sbjct: 579 CAVISSFVKLGQLNMAEEVYKEM 601
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 145/355 (40%), Gaps = 58/355 (16%)
Query: 21 GFAAG-KATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREA----E 75
G++A A E+G +S + F + ++ ++ +N +IK +A E
Sbjct: 473 GYSANIDAYGERGYLSEAERV---FICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFE 529
Query: 76 TVLQEMTDPDCVTYNTLISAACEAEKNHNLS---------------IPYVRIV------- 113
+++ PD TYNTL+ A+ H IPY ++
Sbjct: 530 SMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLG 589
Query: 114 ------ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
E+Y +M + P+ Y +I F D V++A+ + M E G+ ++ Y+
Sbjct: 590 QLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYN 649
Query: 168 RIISRFCKNKEMGKALEMKVEML---DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
+I + K + +A + ++L +K +PDV+ +I L + + +A +F M
Sbjct: 650 SLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM 709
Query: 225 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 284
RG T+ ++ Y G F + + ++ + L P ++YN+++
Sbjct: 710 KQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILT------DP--LSYNSVLG 760
Query: 285 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS----------GFRRIRELRK 329
R EA+E + M + PD+ ++ ++ + R+I E+RK
Sbjct: 761 LFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRK 815
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 56/284 (19%)
Query: 58 FNAVIKRLCGE-GRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNHNLSIPYVRI 112
F A I L G+ G A+ V +EM + DC +++N L+SA + LS + +
Sbjct: 111 FAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSA-------YRLSKKFDVV 163
Query: 113 VELYHQMCVR-ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII- 170
EL++++ + + P+ +Y +I+ C+++ + EAV +L + KGL P +++ ++
Sbjct: 164 EELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLL 223
Query: 171 SRFCKNK-EMGKALEMKV---------------------------------EMLDKGIFP 196
S + K + E+G+ + K+ E+ G+ P
Sbjct: 224 SSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKP 283
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
DV ++ +I+ ++ ++ EA ++E++ G P T+ L+ A C G+F L
Sbjct: 284 DVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 300
E K +L T L+ L + +EA EI++
Sbjct: 344 KETFSKRYL--------VGQTTLQQLVDELVKGSKREEAEEIVK 379
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 133/318 (41%), Gaps = 31/318 (9%)
Query: 4 LLRVSFTVATLKTFRIRGFAAGKATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIK 63
+LR +F ++ F + T +SPP + G+ ++ + F K
Sbjct: 7 VLRGTFNTCPIRRFSSAATVVSEPTAVTAAISPPQKSLTSLVNGERNPKRIVEKF----K 62
Query: 64 RLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRE 123
+ C R R + Y+ + A++ H YV + L Q R+
Sbjct: 63 KACESERFR-----------TNIAVYDRTVRRLVAAKRLH-----YVEEI-LEEQKKYRD 105
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKAL 183
+S R +I L+ E A + M + S++ ++S + +K+
Sbjct: 106 MSKEGFAAR-IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVE 164
Query: 184 EMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 242
E+ E+ K I PD+ +Y LI+ LC + L EA L E+ +G+ P T++TL+ +
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLS 224
Query: 243 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 302
LKG+F + ++++K + + + TYNA + GL + E + + +
Sbjct: 225 SYLKGQFELGEEIWAKMVEK--------NVAIDIRTYNARLLGLANEAKSKELVNLFGEL 276
Query: 303 PEMLLDPDEVSYSAVISG 320
L PD S++A+I G
Sbjct: 277 KASGLKPDVFSFNAMIRG 294
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 47 GKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKN 102
GK + + +VS+N +IK LC + + EA +L E+ + PD VT+NTL+ ++
Sbjct: 172 GKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSY----- 226
Query: 103 HNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPH 162
L + E++ +M + ++ + TY + + + +E V + + GL P
Sbjct: 227 --LKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
Query: 163 ADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
S++ +I +M +A E++ G PD + LL+ +C A +LF+
Sbjct: 285 VFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFK 344
Query: 223 EMLLRGMSPGGRTYDTLVE 241
E + G T LV+
Sbjct: 345 ETFSKRYLVGQTTLQQLVD 363
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 124/286 (43%), Gaps = 25/286 (8%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
++ +N +K + ++E + EM + PD T+ T+IS A + +P
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQN------GVPK- 227
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
R VE + +M P+ T MI + V+ A+ + + A ++S +I
Sbjct: 228 RAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLI 287
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+ + L + EM G+ P++ Y LI + +R +A+ ++++++ G +
Sbjct: 288 RIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFT 347
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P TY LV AY + E+ +KG S +++ YN L+ +C
Sbjct: 348 PNWSTYAALVRAYGRARYGDDALAIYREMKEKG--------LSLTVILYNTLL-SMCADN 398
Query: 291 R-PDEALEILRGMPEM-LLDPDEVSYSAVISGFR---RIRELRKAF 331
R DEA EI + M DPD ++S++I+ + R+ E A
Sbjct: 399 RYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAAL 444
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 16/228 (7%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D VT++TLI + + +S Y + +Y +M + PN Y +I R
Sbjct: 279 DAVTFSTLI-------RIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRP 331
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
+A I + + G +P+ +Y+ ++ + + + AL + EM +KG+ V Y L
Sbjct: 332 WQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTL 391
Query: 205 IQLLCHQRRLLEARDLFQEML-LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
+ + R + EA ++FQ+M P T+ +L+ Y G S+ +
Sbjct: 392 LSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA--------EAA 443
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 311
L F P+L ++I ++ D+ + + E+ + PD+
Sbjct: 444 LLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 12/216 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
VSFN IK C G + A ++EM PD VTY TLISA + E+ V
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHER-------CVI 230
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
L++ M ++ PN TT+ I+ +R R +A +L LM + + P + +Y+ +I
Sbjct: 231 GNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIK 290
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
F + A + M KG P++ Y +I LC A + ++ + + P
Sbjct: 291 GFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYP 350
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 267
T + L++ KG+ + + E++ + P+
Sbjct: 351 NLDTVEMLLKGLVKKGQLDQAKSIM-ELVHRRVPPF 385
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 117/291 (40%), Gaps = 36/291 (12%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
+VS+ A+IK G I A+ + E+ D V++N +IS E Y +E
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN-------YKEALE 252
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
L+ M + P+E+T ++ +E + + + G + + +I +
Sbjct: 253 LFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS 312
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K E LE + ++ + DV ++ LI H EA LFQEML G +P
Sbjct: 313 KCGE----LETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 235 TYDTLVEAYCLKG--EFSKVFHLQDEVIQKGFL-----------------------PYYV 269
T +++ A G + + H+ + KG +
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 270 TSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
+ SL ++NA+I G R D + ++ M ++ + PD++++ ++S
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 167/421 (39%), Gaps = 60/421 (14%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
PN + M R + A+ + M GL P++ ++ ++ K+K + ++
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
+L G D++ + LI + RL +A +F + R + +Y L++ Y
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVV----SYTALIKGYAS 212
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEM 305
+G L DE+ K +V++NA+I G EALE+ + M +
Sbjct: 213 RGYIENAQKLFDEIPVK------------DVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 306 LLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFS 365
+ PDE + V+S A +E+ ++ W D SN +
Sbjct: 261 NVRPDESTMVTVVSAC--------AQSGSIELGRQVHLWIDDHGFG-------SNLKIVN 305
Query: 366 SLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCL 425
+L++ Y + E A L + Y D +S+ L+ G + + + LLLF +
Sbjct: 306 ALIDLYSKCGELETACGLFERLPY-KDVISWNTLIGGY--THMNLYKEALLLFQEMLRSG 362
Query: 426 TIPSYIIYDILIEKCANNEFKSVVELVKGF---RMRGLVN------------------EA 464
P+ + ++ CA+ + + + R++G+ N EA
Sbjct: 363 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEA 422
Query: 465 A-RARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 523
A + +++LH++ + +N +IF + G ++D++ M G + + L+
Sbjct: 423 AHQVFNSILHKSL----SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 524 A 524
A
Sbjct: 479 A 479
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 102/229 (44%), Gaps = 18/229 (7%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDP----DCVTYNTLISAACEAEKNHNLSIPYVRI 112
+F ++K C G+I+EA +++E+ + D + L+ C A N + + I
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRA----NRMVDALEI 386
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
V++ M R+L + Y +I + +N V +A+ ++ + G P +Y+ I+
Sbjct: 387 VDI---MKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQH 442
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
K K+ K + EM++ GI PD A ++ Q R+ EA +F M +G+ P
Sbjct: 443 LFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPT 502
Query: 233 GRTYDTLVEAYCLKGEFSKVF------HLQDEVIQKGFLPYYVTSFSPS 275
++Y V+ C + ++ H VI+ + ++S +
Sbjct: 503 WKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKN 551
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 130/310 (41%), Gaps = 37/310 (11%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRN--RVEEAVGILRLMAEKGLSPHADSYSRII 170
+ + +M L P+ +T++C+I + C++ VEEA R M G P + +
Sbjct: 733 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYL 792
Query: 171 SRFCKNKEMGKALEMK--VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
C E+G + K ++ L K FP AY + I+ LC +L EA
Sbjct: 793 GCLC---EVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGER 849
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCF 288
TY ++V +G+ K + + + G P + Y +LI + F
Sbjct: 850 SLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIG--------TKPGVHVYTSLI--VYF 899
Query: 289 FQRP--DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 346
F+ ++ LE + M +P V+Y+A+I G+ + ++ +A+ M+++ T
Sbjct: 900 FKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTS--- 956
Query: 347 DQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQ---AQYLPDSVSYCLLLNGL 403
+ T+S +N C K+E ALKL + P ++++ + GL
Sbjct: 957 ------------PDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGL 1004
Query: 404 HKKATSRFAK 413
+++ A+
Sbjct: 1005 NREGKHDLAR 1014
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 129/582 (22%), Positives = 224/582 (38%), Gaps = 106/582 (18%)
Query: 14 LKTFRIRGFAAGKATT-EKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIR 72
++T+ I GKA KGL+ + GF E ++N +I+ LC GR
Sbjct: 224 IRTWTILISVYGKAKKIGKGLLVFEKMRKSGF-------ELDATAYNIMIRSLCIAGRGD 276
Query: 73 EAETVLQEMTDPDCV----TYNTLISAACEAEKN---HNLSIPYVRIVE---------LY 116
A +EM + TY L+ ++EK +++ VRI E L
Sbjct: 277 LALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLL 336
Query: 117 HQMCV-----------RELSPNETT-----YRCMIRLFCDRNRVEEAVGILRLMAEKGLS 160
CV REL E + +++ C NR+ +A+ I+ +M + L
Sbjct: 337 KSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD 396
Query: 161 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 220
++ Y IIS + + ++ KALE + G P V Y ++Q L ++ + +L
Sbjct: 397 -DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNL 455
Query: 221 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYN 280
F EM+ G+ P +V + + ++ + + + +KG P+ +Y+
Sbjct: 456 FNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKG--------IKPTWKSYS 507
Query: 281 ALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+ LC R DE ++I M + + +S VIS + E K +K E+ ++
Sbjct: 508 IFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIK-EIQKR 566
Query: 341 ETCWPLDQDTNESLVKDLSNHDTFSSLVNDY-CAEDKAEMALKLRYQAQYLPDSVSYCLL 399
+ + N S + S + LV+DY C + + AL A D C +
Sbjct: 567 SNSYC--DELNGSGKAEFSQEE---ELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRV 621
Query: 400 LNGLH---------KKATSRFAKRLLLFYIVAHC-------LTIPSYI-----------I 432
L+ +K+T +F L++ ++ H L S++
Sbjct: 622 LSSSRDWERTQEALEKSTVQFTPELVV-EVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEA 680
Query: 433 YDILIEKCA-NNEFKSVVELVKGFRMR-------------------GLVNEAARARDTML 472
Y++ I+ +FK + L R + GL N A R M
Sbjct: 681 YNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMK 740
Query: 473 HRNYRPEGAVYNLLIFDHC--IGGNVHKAYDMYKEMLHYGFV 512
P + + LI C G NV +A ++EM+ GFV
Sbjct: 741 DMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFV 782
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 124/293 (42%), Gaps = 51/293 (17%)
Query: 83 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
D D T+ LIS +A+K + + ++ +M + T Y MIR C
Sbjct: 221 DKDIRTWTILISVYGKAKK-------IGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAG 273
Query: 143 RVEEAVGILRLMAEKGLS-----------------------------------PHADSYS 167
R + A+ + M EKG++ D++
Sbjct: 274 RGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFG 333
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
++ FC + ++ +ALE+ E+ +K + D + +L++ LC R+++A ++ M R
Sbjct: 334 YLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRR 393
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
+ Y ++ Y + + SK Q EVI+K P P + TY ++ L
Sbjct: 394 KLDDSN-VYGIIISGYLRQNDVSKALE-QFEVIKKSGRP-------PRVSTYTEIMQHLF 444
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
++ ++ + M E ++PD V+ +AV++G + +A+++ M++K
Sbjct: 445 KLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEK 497
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 141/326 (43%), Gaps = 43/326 (13%)
Query: 154 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRR 213
M + G +++ +IS + K K++GK L + +M G D AY ++I+ LC R
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGR 274
Query: 214 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD------EVIQKGFLPY 267
A + ++EM+ +G++ G RTY L++ + V + D E+ + Y
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY 334
Query: 268 YVTSFSPS--------LVT-------------YNALIHGLCFFQRPDEALEILRGMPEML 306
+ SF S L+ + L+ GLC R +ALEI+ M
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRK 394
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSS 366
LD V Y +ISG+ R ++ KA E + E+ +K + P T +++ L F
Sbjct: 395 LDDSNV-YGIIISGYLRQNDVSKALE-QFEVIKK-SGRPPRVSTYTEIMQHLFKLKQFEK 451
Query: 367 LVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLT 426
N + + E ++ PDSV+ ++ G +R A+ +F +
Sbjct: 452 GCNLF--NEMIENGIE--------PDSVAITAVVAG--HLGQNRVAEAWKVFSSMEEKGI 499
Query: 427 IPSYIIYDILI-EKCANNEFKSVVEL 451
P++ Y I + E C ++ + ++++
Sbjct: 500 KPTWKSYSIFVKELCRSSRYDEIIKI 525
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 18/225 (8%)
Query: 65 LCGEGRIREAETVLQEMTD---PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCV 121
LC G ++A++ L + P V Y+ I A C K + EL
Sbjct: 795 LCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEA------LSELASFEGE 848
Query: 122 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 181
R L ++ TY ++ R +++A+ + M E G P Y+ +I F K K++ K
Sbjct: 849 RSL-LDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEK 907
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
LE +M + P V Y +I ++ EA + F+ M RG SP +TY +
Sbjct: 908 VLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFIN 967
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 286
C + L E++ KG +PS + + + +GL
Sbjct: 968 CLCQACKSEDALKLLSEMLDKG--------IAPSTINFRTVFYGL 1004
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 154 MAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQ-- 211
M +G D+++ +I ++ + A+ EM D G+ P + LI +LC +
Sbjct: 704 MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKG 763
Query: 212 RRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTS 271
R + EA F+EM+ G P + C G D + + GF
Sbjct: 764 RNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF------- 816
Query: 272 FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 331
P V Y+ I LC + +EAL L D+ +Y +++ G + +L+KA
Sbjct: 817 --PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKAL 874
Query: 332 E 332
+
Sbjct: 875 D 875
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 124/326 (38%), Gaps = 60/326 (18%)
Query: 54 CLVSFNAVIKRLCGEGRIREAETVLQEM--TDP-DCVT-YNTLISAACEAEKNHNLS--- 106
C V+ + ++K+ C +G++ EAE L+ + DP C + L+ A C K +
Sbjct: 250 CAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLL 309
Query: 107 --IPYVRIVEL--YHQMCVREL----------------SPNET------TYRCMIRLFCD 140
I V V + + + +R L SP E Y M+
Sbjct: 310 DEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLK 369
Query: 141 RNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHA 200
N ++ IL M +G+SP+ + + + FCK + +ALE+ + G P +
Sbjct: 370 ENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMS 429
Query: 201 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
Y LI LC + +A D+ + + RG GG+T+ TL A C KG+ L
Sbjct: 430 YNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAA 489
Query: 261 QKGFLPYYV---------------------------TSFSPSLVTYNALIHGLCFFQRPD 293
++ LP + + S + +LI+G R D
Sbjct: 490 ERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGD 549
Query: 294 EALEILRGMPEMLLDPDEVSYSAVIS 319
A +++ M E P Y VI
Sbjct: 550 IAAKLIIRMQEKGYTPTRSLYRNVIQ 575
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 135/329 (41%), Gaps = 43/329 (13%)
Query: 83 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
D D Y+ L++A E + + + ++ Q+ VR T+ +++ FC +
Sbjct: 214 DLDSFGYHVLLNALVEEKCFDSFDV-------IFDQISVRGFVC-AVTHSILVKKFCKQG 265
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
+++EA LR + + ++ C ++ +A ++ E+ G AY
Sbjct: 266 KLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYN 325
Query: 203 LLIQLLCHQRRLLEARDLFQEML-LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+ I+ L L D Q++ L G Y+++V + V+ + E++
Sbjct: 326 IWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMV 385
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRP---DEALEILRGMPEMLLDPDEVSYSAVI 318
+G SP+ T NA LCFF + DEALE+ R E+ P +SY+ +I
Sbjct: 386 RG--------VSPNKKTMNA---ALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLI 434
Query: 319 SGFRRIRELRKAFE-LKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKA 377
+ +A++ LK +D+ TFS+L N C + K
Sbjct: 435 HTLCANESVEQAYDVLKGAIDRGH----------------FLGGKTFSTLTNALCWKGKP 478
Query: 378 EMALKLRYQA---QYLPDSVSYCLLLNGL 403
+MA +L A LP ++ C +++ L
Sbjct: 479 DMARELVIAAAERDLLPKRIAGCKIISAL 507
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 122 RELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 181
R L+ N T+ M+ +C + EEA+ + R M + SP S++ ++++ C N+ + +
Sbjct: 344 RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAE 403
Query: 182 ALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVE 241
A ++ EM +K + PD + YGLL+ + ++ E ++ M+ + P Y+ L +
Sbjct: 404 AEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQD 463
Query: 242 AYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRG 301
G+ K F V+ Y ++ L R DE L+I+
Sbjct: 464 QLIKAGKLDDA---------KSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDE 514
Query: 302 MPEMLLDPDEVSYSAVISGFRRIRELRKA 330
M LD D V S + F + ELRK
Sbjct: 515 M----LDDDTVRVSEELQEFVK-EELRKG 538
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 122/261 (46%), Gaps = 13/261 (4%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P+ +TYN + A + K P + + + L+P+ T+R +++ +
Sbjct: 163 PNIITYNLIFQAYLDVRK------PEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDN 216
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK--GIFPDVHAY 201
+E+A+ I MA KG YS ++ KN + L++ E+ +K G D Y
Sbjct: 217 LEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVY 276
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRG--MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
G L++ + EA + ++E + + Y+ ++EA G+F + L D V
Sbjct: 277 GQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAV 336
Query: 260 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
++ P ++ +L T+N +++G C + +EA+E+ R M + PD +S++ +++
Sbjct: 337 KKEHNPPRHLAV---NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMN 393
Query: 320 GFRRIRELRKAFELKLEMDQK 340
L +A +L EM++K
Sbjct: 394 QLCDNELLAEAEKLYGEMEEK 414
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 106/480 (22%), Positives = 181/480 (37%), Gaps = 88/480 (18%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P T NT+++A K Y +++L+ + ++PN TY + + + D +
Sbjct: 128 PTIFTVNTVLAAQLRQAK-------YGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRK 180
Query: 144 VEEAVGILRLMAEKG-LSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
E A+ +L + L+P ++ ++ N + KA+E+K +M KG D Y
Sbjct: 181 PEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYS 240
Query: 203 LLIQLLCHQRRLLEARDLFQEML--LRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
L+ L+QE+ L G G Y L++ Y +K + +E +
Sbjct: 241 YLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAV 300
Query: 261 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
+ + S + YN ++ L + DEAL++ + AV
Sbjct: 301 GEN------SKVRMSAMAYNYVLEALSENGKFDEALKL---------------FDAVKKE 339
Query: 321 FRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMA 380
R L N TF+ +VN YCA K E A
Sbjct: 340 HNPPRHL------------------------------AVNLGTFNVMVNGYCAGGKFEEA 369
Query: 381 LKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILI 437
+++ Q PD++S+ L+N L A++L + + P Y +L+
Sbjct: 370 MEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKL--YGEMEEKNVKPDEYTYGLLM 427
Query: 438 EKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVH 497
+ C FK G ++E A TM+ N RP AVYN L G +
Sbjct: 428 DTC----FK-----------EGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLD 472
Query: 498 KA---YDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWVIRNTLRSCNLNDSEQLK 554
A +DM L + F +++AL R +EM ++ L + SE+L+
Sbjct: 473 DAKSFFDMMVSKLKMDDEAYKF----IMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQ 528
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/214 (19%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 56 VSFNAVIKRLCGEGRIREA----ETVLQEMTDP-----DCVTYNTLISAACEAEKNHNLS 106
+++N V++ L G+ EA + V +E P + T+N +++ C K
Sbjct: 311 MAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGK----- 365
Query: 107 IPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 166
+ +E++ QM + SP+ ++ ++ CD + EA + M EK + P +Y
Sbjct: 366 --FEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTY 423
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
++ K ++ + M++ + P++ Y L L +L +A+ F +M++
Sbjct: 424 GLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMV 482
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
+ Y ++ A G ++ + DE++
Sbjct: 483 SKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEML 516
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 123/289 (42%), Gaps = 58/289 (20%)
Query: 75 ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCM 134
E +L+E P+ N+L++ +H+L +++Y M + +++ + T+Y +
Sbjct: 291 EDLLKENIKPNIYVINSLMNV-----NSHDLGY----TLKVYKNMQILDVTADMTSYNIL 341
Query: 135 IRLFCDRNRVEEAVGIL----RLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
++ C RV+ A I R+ + L A +Y II F K AL++K +M
Sbjct: 342 LKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMK 401
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
G+ P+ H + LI + + +A LF+EML G P + ++ L+ A ++
Sbjct: 402 SVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYD 461
Query: 251 KVFHL--------------QDEVIQKGFL---------------------PYYVTS---- 271
+ F L D+++ KG PY S
Sbjct: 462 RAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFC 521
Query: 272 FSPSLVTYNALIH--GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 318
F P+ TYN L+ G +++ E++ M + L P+++++S +I
Sbjct: 522 FKPTTATYNILLKACGTDYYR----GKELMDEMKSLGLSPNQITWSTLI 566
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 90/232 (38%), Gaps = 29/232 (12%)
Query: 31 KGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYN 90
KG S PN+L G + KR C + P TYN
Sbjct: 487 KGRTSSPNIL-KNNGPGSLVNRNSNSPYIQASKRFCFK---------------PTTATYN 530
Query: 91 TLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGI 150
L+ A C + Y R EL +M LSPN+ T+ +I + VE AV I
Sbjct: 531 ILLKA-CGTD--------YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRI 581
Query: 151 LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCH 210
LR M G P +Y+ I +NK + A + EM I P+ Y L++
Sbjct: 582 LRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSK 641
Query: 211 QRRLLEARD---LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
LLE R ++Q+M G P L+E +C +G + QD++
Sbjct: 642 YGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWC-EGVIQENGQSQDKI 692
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 101/476 (21%), Positives = 194/476 (40%), Gaps = 86/476 (18%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
VS+N +I G A + EM + D V++N +I +N NL + EL
Sbjct: 96 VSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYV---RNRNLG----KAREL 148
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
+ M R++ ++ M+ + V++A + M EK + S++ ++S + +
Sbjct: 149 FEIMPERDV----CSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQ 200
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
N +M +A + + + ++ L+ +++++EAR F M +R + +
Sbjct: 201 NSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDSMNVRDVV----S 252
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA 295
++T++ Y G+ + L DE S + T+ A++ G + +EA
Sbjct: 253 WNTIITGYAQSGKIDEARQLFDE------------SPVQDVFTWTAMVSGYIQNRMVEEA 300
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
E+ MPE +EVS++A+++G+ + + A EL D V
Sbjct: 301 RELFDKMPER----NEVSWNAMLAGYVQGERMEMAKEL------------FD-------V 337
Query: 356 KDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRL 415
N T+++++ Y K A L + D VS+ ++ G + S A RL
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNL-FDKMPKRDPVSWAAMIAGYSQSGHSFEALRL 396
Query: 416 LLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRN 475
F + + + + CA+ VV L G ++ G ++
Sbjct: 397 --FVQMEREGGRLNRSSFSSALSTCAD-----VVALELGKQLHG----------RLVKGG 439
Query: 476 YRPEGAVYNLLIFDHCIGGNVHKAYDMYKEM----------LHYGFVCHMFSVLAL 521
Y V N L+ +C G++ +A D++KEM + G+ H F +AL
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVAL 495
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 141/343 (41%), Gaps = 56/343 (16%)
Query: 57 SFNAVIKRLCGEGRIREAETV-----LQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
S+ ++++C E + A ++ L E + YN LI A KNH +
Sbjct: 875 SYREYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRA-KNH------LE 927
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ ++ +M R + P+ETT+ ++ + ++ L M KG+ P+ S + S
Sbjct: 928 VNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTS 987
Query: 172 RFCKNKEMGKALEMKVEM--------------------LDKGIFPDVH------------ 199
C N ++ KAL++ M + KG P
Sbjct: 988 SLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMM 1047
Query: 200 --AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQD 257
Y +I+ L + L A L ML PG +YD+++ + K
Sbjct: 1048 APNYDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHT 1107
Query: 258 EVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAV 317
E+++ G SPS+ T++ L+H C + E+ +++ M + P + + V
Sbjct: 1108 EMVELG--------LSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTV 1159
Query: 318 ISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
I FR + KA E+ +EM QK + +D +T+ SL+ ++S+
Sbjct: 1160 IDRFRVEKNTVKASEM-MEMMQK-CGYEVDFETHWSLISNMSS 1200
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 147/383 (38%), Gaps = 53/383 (13%)
Query: 52 EKCLVS---FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHN 104
E C+V +N +IK LC E + A +L EM D P + LI C A K
Sbjct: 733 EGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGT 792
Query: 105 LSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
+ E + + +I+ ++ +A LR+M GLS +
Sbjct: 793 -------------AFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNK 839
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEM 224
Y+ + +CK K E+ M+ K I V +Y ++ +C + + L A L + +
Sbjct: 840 IYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFL 899
Query: 225 LLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIH 284
LL +PGG ++ Y + + HL+ + K L P T+N L+H
Sbjct: 900 LLGESNPGGVIIYNMLIFYMFRAK----NHLE---VNKVLLEMQGRGVLPDETTFNFLVH 952
Query: 285 GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCW 344
G +L L M + P+ S AV S +++KA +L M+ K W
Sbjct: 953 GYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESK--GW 1010
Query: 345 PLDQDTNES-LVKDL-----------------------SNHDTFSSLVNDYCAEDKAEMA 380
L ++ +V+ L N+D ++D D A
Sbjct: 1011 NLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAVHL 1070
Query: 381 LKLRYQAQYLPDSVSYCLLLNGL 403
L + Q +P S SY ++NGL
Sbjct: 1071 LNTMLKNQSIPGSSSYDSVINGL 1093
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 131/317 (41%), Gaps = 42/317 (13%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+ F+ V++ G + EA +VL+ M + PD + ++ + + L Y
Sbjct: 594 IGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYY 653
Query: 111 RI--------VELYH---QMCVREL-----------------SPNETTYRCMIRLFCDRN 142
RI E+Y+ C R L +PN T+ ++ ++ +
Sbjct: 654 RIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVY-GKA 712
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
++ + V L L+A++ SY+ II+ + KNK+ M G + AY
Sbjct: 713 KLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYN 772
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
L+ +++ + R + + M P TY+ ++ Y +G +V + E+ +
Sbjct: 773 TLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKES 832
Query: 263 GFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
G P L +YN LI +EA+ +++ M + PD+V+Y+ +++ R
Sbjct: 833 GL--------GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALR 884
Query: 323 RIRELRKAFELKLEMDQ 339
R E +A + L M Q
Sbjct: 885 RNDEFLEAIKWSLWMKQ 901
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 36/287 (12%)
Query: 50 TTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVT----YNTLISAACEAEKNHNL 105
T E C S++ I++L +E + ++ ++ + YN++I +A K
Sbjct: 169 THENC--SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGK---- 222
Query: 106 SIPYVRIVELYHQMCVR---ELSPNETTYRCMIRLFCDRNR--------VEEAVGILRLM 154
+R V ++ M E P TY + + R +E + R M
Sbjct: 223 ---LIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQM 279
Query: 155 AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM-LDKGIFPDVHAYGLLIQLLCHQRR 213
+ G+ P + + ++ + + + AL + +M + P+ Y LI LC Q R
Sbjct: 280 VDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGR 339
Query: 214 LLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 273
+ AR+L EM +G P G++Y++LV A+ L GE E+I+ G V F
Sbjct: 340 TINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENG----RVVDF- 394
Query: 274 PSLVTYNALIHGLCFFQRPDEALEILRGMPE-MLLDPDEVSYSAVIS 319
++Y L+ C + DEA +L + E L+D D SY +++
Sbjct: 395 ---ISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRD--SYDKLVN 436
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 43/257 (16%)
Query: 166 YSRIISRFCKNKEMGKALEMKVEMLDKGIF---PDVHAYGLLIQLL--------CHQRRL 214
Y+ II F K ++ +A+ + M+ P + Y +L + L + +
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 215 LEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK---GEFSKVFHLQDEVIQKGFLPYYVTS 271
R LF++M+ G+ P + LV+ Y L + ++FH V
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS----------VVYD 319
Query: 272 FSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAF 331
P+ TY+ LIHGLC R A E+L M P+ SY+++++ AF
Sbjct: 320 CEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVN----------AF 369
Query: 332 ELKLEMDQKETC-WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL--RYQAQ 388
L E+D C W + + N +V +S + +LV++ C + K + A +L + +
Sbjct: 370 ALSGEIDDAVKCLWEMIE--NGRVVDFIS----YRTLVDESCRKGKYDEATRLLEMLREK 423
Query: 389 YLPDSVSYCLLLNGLHK 405
L D SY L+N LHK
Sbjct: 424 QLVDRDSYDKLVNVLHK 440
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 85 DCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRV 144
D N LI CE+ NL ++L + ++ PN T+ +IR FC++ +
Sbjct: 201 DACCLNILIKGLCES---GNLEAA----LQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKF 253
Query: 145 EEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLL 204
EEA +L M ++ + P +++ +IS K + + +++ M KG P+ Y +
Sbjct: 254 EEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEV 313
Query: 205 IQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
+ L ++R LEA+++ +M+ GM P +Y +V C ++ + +++ GF
Sbjct: 314 LYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Query: 265 LP 266
+P
Sbjct: 374 VP 375
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 105/244 (43%), Gaps = 11/244 (4%)
Query: 104 NLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA 163
N+ P + H ++ P E+ Y MI F +E ++R + + +
Sbjct: 71 NVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFS 130
Query: 164 DSYSRIISRFCKN--KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 221
+ + + R N + +A+E+ M D G +P ++ ++ LL + E +F
Sbjct: 131 EEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIF 190
Query: 222 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNA 281
G+ + L++ C G L DE Q+ P+++T++
Sbjct: 191 VSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQ--------KSRPNVMTFSP 242
Query: 282 LIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKE 341
LI G C + +EA ++L M + ++PD ++++ +ISG R+ + + +L LE + +
Sbjct: 243 LIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDL-LERMKVK 301
Query: 342 TCWP 345
C P
Sbjct: 302 GCEP 305
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 106/254 (41%), Gaps = 19/254 (7%)
Query: 69 GRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVREL 124
GRI A +L M D P ++N +++ A+ + +V +L ++
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI----- 200
Query: 125 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 184
+ +I+ C+ +E A+ +L ++ P+ ++S +I FC + +A +
Sbjct: 201 --DACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFK 258
Query: 185 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 244
+ M + I PD + +LI L + R+ E DL + M ++G P TY ++
Sbjct: 259 LLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318
Query: 245 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
K + + ++I G PS ++Y ++ GLC + E +LR M
Sbjct: 319 DKKRNLEAKEMMSQMISWG--------MRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVN 370
Query: 305 MLLDPDEVSYSAVI 318
P + + V+
Sbjct: 371 HGFVPKTLMWWKVV 384
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 76/156 (48%), Gaps = 11/156 (7%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+++F+ +I+ C +G+ EA +L+ M +PD +T+N LIS + +
Sbjct: 237 VMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEE------ 290
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++L +M V+ PN TY+ ++ D+ R EA ++ M G+ P SY +++
Sbjct: 291 -GIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMV 349
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQ 206
C+ K + + + +M++ G P + ++Q
Sbjct: 350 LGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 93/240 (38%), Gaps = 39/240 (16%)
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
R+ A+ IL M + G P + S++ I++ K + ++ V G+ D
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQK 262
+LI+ LC L A L E + P T+ L+ +C KG+F + F L + + ++
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 263 GFLPYYVT---------------------------SFSPSLVTYNALIHGLCFFQRPDEA 295
P +T P+ TY +++GL +R EA
Sbjct: 267 RIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 296 LEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLV 355
E++ M + P +SY ++ G + + +EMD W L Q N V
Sbjct: 327 KEMMSQMISWGMRPSFLSYKKMVLGLCETKSV-------VEMD-----WVLRQMVNHGFV 374
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 46/250 (18%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTD---PDCVTYNTLISAACEAEK------------ 101
S V+K+LC +G AE +++ + PD + LIS C AEK
Sbjct: 213 SLTLVVKKLCEKGHASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMS 272
Query: 102 ---------NHNLSI----------------PYVRIVELYHQMCVRELSPNETTYRCMIR 136
+N+ + P V V L +M R + N T+ +I
Sbjct: 273 RGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLL--EMEFRGVPRNTETFNVLIN 330
Query: 137 LFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG--- 193
C R EEA+ + M E G P A++Y +I + +G+ EM +M G
Sbjct: 331 NLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGE 390
Query: 194 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 253
+ YG L ++LC RL A +F+ M G PG +TYD L+ C + ++
Sbjct: 391 LLNKKEYYGFL-KILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRAN 449
Query: 254 HLQDEVIQKG 263
L E +KG
Sbjct: 450 GLYKEAAKKG 459
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 2/161 (1%)
Query: 158 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 217
GL +S + ++ + C+ A +M V+ IFPD + LLI C +L EA
Sbjct: 206 GLKRDKESLTLVVKKLCEKGHASIAEKM-VKNTANEIFPDENICDLLISGWCIAEKLDEA 264
Query: 218 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLV 277
L EM G G + Y+ +++ C F LQ EV +K L +
Sbjct: 265 TRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEV-EKVLLEMEFRGVPRNTE 323
Query: 278 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI 318
T+N LI+ LC +R +EA+ + M E PD +Y +I
Sbjct: 324 TFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLI 364
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 106/272 (38%), Gaps = 34/272 (12%)
Query: 43 GFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDP-----DCVTYNTLISAAC 97
G A GK + + I RL GR ++ ++M + D + ++ C
Sbjct: 171 GIAGGK--------TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLC 222
Query: 98 EAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEK 157
E K H I E + E+ P+E +I +C +++EA + M+
Sbjct: 223 E--KGH------ASIAEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRG 274
Query: 158 GLSPHADSYSRIIS---RFCKNKEMGK----ALEMKVEMLDKGIFPDVHAYGLLIQLLCH 210
G +Y+ ++ + C+ K+ K ++ +EM +G+ + + +LI LC
Sbjct: 275 GFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCK 334
Query: 211 QRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 270
RR EA LF M G P TY L+ + + + D++ G+
Sbjct: 335 IRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELL-- 392
Query: 271 SFSPSLVTYNALIHGLCFFQRPDEALEILRGM 302
+ Y + LC +R + A+ + + M
Sbjct: 393 ----NKKEYYGFLKILCGIERLEHAMSVFKSM 420
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E++ +M L PN M+ C V+EA+ + LM +KG P Y+ ++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
CK ++ A + +M + GI P+ +YG+L+Q L + L +A EML G SP
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
T+ LV+A C + D + QKGF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E++ +M L PN M+ C V+EA+ + LM +KG P Y+ ++ F
Sbjct: 120 EIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 174 CKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG 233
CK ++ A + +M + GI P+ +YG+L+Q L + L +A EML G SP
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 234 RTYDTLVEAYCLKGEFSKVFHLQDEVIQKGF 264
T+ LV+A C + D + QKGF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGF 267
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 107/251 (42%), Gaps = 49/251 (19%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMT---DPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
FN +++ C E ++EA ++ +++ +PD T N L+ EA V E
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLLGFKEAGD--------VTATE 230
Query: 115 L-YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLM------------------- 154
L YH+M R PN TY I FC + EA+ + M
Sbjct: 231 LFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGS 290
Query: 155 ----------------AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPD- 197
+++GL+P +Y+ ++S K ++ A+++ EM +KGI PD
Sbjct: 291 GVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDS 350
Query: 198 VHAYGLLIQLLCHQRRLLEAR-DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
V + + I ++ + + +Q+M R + P T L++ +C GE + L
Sbjct: 351 VTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLW 410
Query: 257 DEVIQKGFLPY 267
+++KG+ P+
Sbjct: 411 KYMLEKGYCPH 421
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 102/242 (42%), Gaps = 19/242 (7%)
Query: 38 NVLIPGFA-AGKATTEKCL-------------VSFNAVIKRLCGEGRIREAETVLQEMTD 83
N+L+ GF AG T + V++ I C + EA + ++M
Sbjct: 214 NILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDM-- 271
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
D + ++ + ++ ++ +L+ ++ R L+P+ Y ++
Sbjct: 272 -DRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGD 330
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMG--KALEMKVEMLDKGIFPDVHAY 201
V A+ +++ M EKG+ P + ++ + K+KE G E +M ++ + P
Sbjct: 331 VSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTI 390
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+L++L CH + DL++ ML +G P G + L A C + + F + ++
Sbjct: 391 VMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVE 450
Query: 262 KG 263
+G
Sbjct: 451 RG 452
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 108/247 (43%), Gaps = 17/247 (6%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
P+ +++ ++ C+ K + V++ ++ ++ +E + ++R FC
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE--FNILLRAFCTERE 191
Query: 144 VEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV---EMLDKGIFPDVHA 200
++EA I + + +P + + ++ F KE G ++ EM+ +G P+
Sbjct: 192 MKEARSIFEKLHSR-FNPDVKTMNILLLGF---KEAGDVTATELFYHEMVKRGFKPNSVT 247
Query: 201 YGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
YG+ I C +R EA LF++M + TL+ + K L DE+
Sbjct: 248 YGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEIS 307
Query: 261 QKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISG 320
++G +P YNAL+ L A+++++ M E ++PD V++ ++ G
Sbjct: 308 KRGL--------TPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIG 359
Query: 321 FRRIREL 327
+ +E
Sbjct: 360 MMKSKEF 366
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 39/303 (12%)
Query: 45 AAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHN 104
AA +T E + S+N ++K + +I A + E+ PD V+YNTLIS +A +
Sbjct: 64 AAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA 123
Query: 105 LSIPYVRI----------------------VELYHQMCVRELSPNETTY----RCMIRLF 138
+ + R+ V+L Q+ +S +Y + +
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYY 183
Query: 139 CDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDV 198
+ EAV + M E L S++ +I + ++KE KAL + EM+ KG D+
Sbjct: 184 SKGGLLREAVSVFYGMDE--LRDEV-SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240
Query: 199 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDE 258
++ L L+ R +++ G L++ Y G ++ ++
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYD-SEK 299
Query: 259 VIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQR-PDEALEILRGMPEMLLDPDEVSYSAV 317
V Q+ SP LV +N +I G + +EA++ R M + PD+ S+ V
Sbjct: 300 VFQE--------ILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 318 ISG 320
S
Sbjct: 352 TSA 354
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V++ +I+ L G A+ + +EM PD +TYN L+ C KN L V
Sbjct: 17 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC---KNGKLEKALVA 73
Query: 112 I-----VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 166
+L+ + ++ + PN TY MI FC + EEA + R M E G P + +Y
Sbjct: 74 GKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTY 133
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEML 225
+ +I ++ + + E+ EM D YGL+ +L H RL + F EML
Sbjct: 134 NTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKG---FLEML 188
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+EL+ +M R L N TY +I+ + A I + M G+ P +Y+ ++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 173 FCKNKEMGKAL-EMKVE--------MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQE 223
CKN ++ KAL KVE + KG+ P+V Y +I C + EA LF++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 224 MLLRGMSPGGRTYDTLVEAYCLKGE 248
M G P TY+TL+ A+ G+
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGD 145
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 5/158 (3%)
Query: 183 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 242
+E+ EM +G+ + Y LIQ L A+++F+EM+ G+ P TY+ L++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 243 YCLKGEFSKVFHLQDEVIQKG---FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEIL 299
C G+ K L ++ G F + P++VTY +I G C +EA +
Sbjct: 61 LCKNGKLEKA--LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 300 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
R M E PD +Y+ +I R + + EL EM
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 138 FCDRNRVEEAVGI---LRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 194
FC R + VG+ L+ M +G P+ + + +I+ C+ + +A ++ M+ GI
Sbjct: 184 FCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGI 243
Query: 195 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 254
V+ + +L+ +A DLF +M+ G SP TY +L++ + G + F
Sbjct: 244 SVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFT 303
Query: 255 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 314
+ +V +G +P +V N +IH R +EA ++ + + L PD+ ++
Sbjct: 304 VLSKVQSEG--------LAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTF 355
Query: 315 SAVIS 319
++++S
Sbjct: 356 ASILS 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 8/177 (4%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEM 185
PN + ++RL C V EA ++ LM G+S + +S ++S F ++ E KA+++
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 186 KVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCL 245
+M+ G P++ Y LI+ + EA + ++ G++P + ++ Y
Sbjct: 270 FNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTR 329
Query: 246 KGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 302
G F E +K F P T+ +++ LC + D I G+
Sbjct: 330 LGRF--------EEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI 378
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 29/288 (10%)
Query: 119 MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 178
M +S + + ++ F ++AV + M + G SP+ +Y+ +I F
Sbjct: 238 MICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGM 297
Query: 179 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 238
+ +A + ++ +G+ PD+ L+I R EAR +F + R + P T+ +
Sbjct: 298 VDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFAS 357
Query: 239 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 298
++ + CL G+F V + + T F LVT N L + AL++
Sbjct: 358 ILSSLCLSGKFDLVPRITHGI---------GTDF--DLVTGNLLSNCFSKIGYNSYALKV 406
Query: 299 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL-KLEMDQKETCWPLDQDTNESLVKD 357
L M D +Y+ +S R R A ++ K+ + +K+ LD + +++
Sbjct: 407 LSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKK---HLDAHFHSAIIDS 463
Query: 358 LSNHDTFSSLVNDY--CAEDKAEMALKLRYQAQYLPDSVSYCLLLNGL 403
L +++ V+ + C +K Y D VSY + + GL
Sbjct: 464 LIELGKYNTAVHLFKRCILEK------------YPLDVVSYTVAIKGL 499
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 7/205 (3%)
Query: 125 SPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALE 184
S ++ Y + R R +EA I + M G P +YS+++ CK K + +A
Sbjct: 367 SLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARG 426
Query: 185 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 244
+ +M +G FPD+ + +LIQ C L +A F ML +G D L++ +
Sbjct: 427 VLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFV 486
Query: 245 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
+ +F E+++ + P TY LI L ++ +EAL++L+ M +
Sbjct: 487 IHNKFEGASIFLMEMVKNA-------NVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKK 539
Query: 305 MLLDPDEVSYSAVISGFRRIRELRK 329
++ ++ F + + +K
Sbjct: 540 QNYPAYAEAFDGYLAKFGTLEDAKK 564
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 24/234 (10%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIV 113
++ + + L GR EAE + + M + PD +TY+ L+ C+A++ + R V
Sbjct: 373 YDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKR-----LEEARGV 427
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
QM + P+ T+ +I+ C N +++A+ M EKG ++ +I F
Sbjct: 428 --LDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
Query: 174 C-KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
NK G ++ + + + + P Y LLI L ++ EA DL Q M
Sbjct: 486 VIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMM-------K 538
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 286
+ Y EA+ G +K L+D K FL + SPS Y +I
Sbjct: 539 KQNYPAYAEAF--DGYLAKFGTLED---AKKFLDVLSSKDSPSFAAYFHVIEAF 587
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 119/296 (40%), Gaps = 33/296 (11%)
Query: 129 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 188
TY +R+ N V E ++ M G D+Y ++ +F K++ M + +++
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEY 323
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR--------GMSPGGRTYDTLV 240
M+D P + LL++ L DL +++ R G S YD +
Sbjct: 324 MMDGPFKPSIQDCSLLLRYLSGSPN----PDL--DLVFRVSRKYESTGKSLSKAVYDGIH 377
Query: 241 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 300
+ G F + + + G+ P +TY+ L+ GLC +R +EA +L
Sbjct: 378 RSLTSVGRFDEAEEITKAMRNAGY--------EPDNITYSQLVFGLCKAKRLEEARGVLD 429
Query: 301 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSN 360
M PD +++ +I G + EL KA M +K + +D + + L+
Sbjct: 430 QMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEK--GFDIDSNLLDVLIDGFVI 487
Query: 361 HDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLL 416
H+ F E + +++ A P +Y LL++ L K S A LL
Sbjct: 488 HNKF---------EGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLL 534
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/473 (19%), Positives = 187/473 (39%), Gaps = 50/473 (10%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSI 107
K CL N+++ G + A + M + D + +N+++ A C+ K+
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHE---- 264
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
VEL +M +SP T+ +I + + + A+ +++ M G++ +++
Sbjct: 265 ---EAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWT 321
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+IS N +AL+M +M G+ P+ + + + + ++ +
Sbjct: 322 AMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM 381
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G ++LV+ Y G+ + D V K + T+N++I G C
Sbjct: 382 GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK------------DVYTWNSMITGYC 429
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLD 347
+A E+ M + L P+ ++++ +ISG+ + + +A +L M++
Sbjct: 430 QAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDG------ 483
Query: 348 QDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLL---- 400
K N T++ ++ Y K + AL+L + Q ++P+SV+ LL
Sbjct: 484 --------KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACA 535
Query: 401 NGLHKKATSR-----FAKRLLLFYIVAHCLTIPSYIIYDILIEKCA--NNEFKSVV---E 450
N L K + L + V + LT DI + E K ++
Sbjct: 536 NLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNS 595
Query: 451 LVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY 503
L+ G+ + G A + M + P + +I H + GNV + ++
Sbjct: 596 LIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVF 648
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 172/421 (40%), Gaps = 55/421 (13%)
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS--RFCKNKEMGKALE 184
N T+ MI + NR E + RLM + G+ P + +I+ C + E GK +
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 185 MKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC 244
V L V L + C + L A F+ M R + +++++ AYC
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGE--LDFATKFFRRMRERDVI----AWNSVLLAYC 258
Query: 245 LKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPE 304
G+ + L E+ ++G SP LVT+N LI G + D A+++++ M
Sbjct: 259 QNGKHEEAVELVKEMEKEG--------ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET 310
Query: 305 MLLDPDEVSYSAVISG-------FRRIRELRKAFELKLE------MDQKETCWPLDQDTN 351
+ D +++A+ISG ++ + RK F + M C L
Sbjct: 311 FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQ 370
Query: 352 ESLVKDLSNHDTF-------SSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLH 404
S V ++ F +SLV+ Y K E A K+ + + D ++ ++ G
Sbjct: 371 GSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKV-FDSVKNKDVYTWNSMITGYC 429
Query: 405 KKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEK-CANNEFKSVVELVKGFRMRGLVNE 463
+ K LF + P+ I ++ +I N + ++L + RM
Sbjct: 430 QAGYC--GKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQ--RME----- 480
Query: 464 AARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIK 523
+D + RN A +NL+I + G +A +++++M F+ + ++L+L+
Sbjct: 481 ----KDGKVQRNT----ATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 524 A 524
A
Sbjct: 533 A 533
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
Query: 157 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 216
+G+ P +D +I C+ + + A + ++M+ KG P + L++ L E
Sbjct: 370 RGIKPFSD----VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDE 425
Query: 217 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 276
A+++ + M RG+ P TY ++ Y G + + E +K SP
Sbjct: 426 AKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH------KKLSP-- 477
Query: 277 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF-RRIRELRKAFELKL 335
VTY+ALI G C + DEAL++L M + P+ Y+ +I F + + KA L
Sbjct: 478 VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFE 537
Query: 336 EMDQK 340
EM QK
Sbjct: 538 EMKQK 542
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 124/307 (40%), Gaps = 50/307 (16%)
Query: 134 MIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKG 193
+I LF + + A + E G +P+A +Y + CK M A + +ML G
Sbjct: 237 LIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSG 296
Query: 194 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYC--------- 244
+ + G +I C + + EA +++ + S R TL+ A C
Sbjct: 297 VLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFA 356
Query: 245 ------LKGE--------FSKVFH----LQDEVIQKGFLPYYVTSF-SPSLVTYNALIHG 285
L GE FS V H +++ K L ++ +P +N ++H
Sbjct: 357 QEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHA 416
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
DEA E+L+ M L PD +Y+ +ISG+ + + +A E+ E +K
Sbjct: 417 CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH---- 472
Query: 346 LDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKL-----RYQAQYLPDSVSYCLLL 400
K LS T+ +L+ YC ++ + ALKL R+ Q P++ Y L+
Sbjct: 473 ----------KKLSPV-TYHALIRGYCKIEEYDEALKLLNEMDRFGVQ--PNADEYNKLI 519
Query: 401 NGLHKKA 407
KA
Sbjct: 520 QSFCLKA 526
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 103/245 (42%), Gaps = 22/245 (8%)
Query: 61 VIKRLCGEGRIREAETVLQ------EMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
+I C EG+ EA +V + + P V TLI+A C+ + ++ + +
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCK--NDGTITFAQEMLGD 362
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
L + R + P + +I C V++A +L M KG +P ++ ++
Sbjct: 363 LSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACS 418
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
K ++ +A E+ M +G+ PDV+ Y ++I + EA+++ E +
Sbjct: 419 KTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV 478
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
TY L+ YC E+ + L +E+ + G P+ YN LI C E
Sbjct: 479 TYHALIRGYCKIEEYDEALKLLNEMDRFG--------VQPNADEYNKLIQSFCLKALDWE 530
Query: 295 ALEIL 299
E+L
Sbjct: 531 KAEVL 535
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 85/214 (39%), Gaps = 14/214 (6%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
Y ++ CD A ++R M KGL P +Y+ +++ +C +M +A E EM
Sbjct: 184 VYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM 243
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEF 249
+G P LLI+ L + L A+++ +M G P +T++ L+EA GE
Sbjct: 244 SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV 303
Query: 250 SKVFHLQDEVIQKGFLPYYVT---SFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
+ YY + TY LI + + DEA +L E
Sbjct: 304 EFCIEM-----------YYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
P Y+ +I G R AF +M K
Sbjct: 353 HKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 82/186 (44%), Gaps = 11/186 (5%)
Query: 61 VIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVRIVELY 116
+I+ L G + A+ ++ +MT PD T+N LI A ++ + + + +E+Y
Sbjct: 258 LIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGE-----VEFC--IEMY 310
Query: 117 HQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKN 176
+ C L + TY+ +I +++EA +L E G P Y+ II C+N
Sbjct: 311 YTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRN 370
Query: 177 KEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTY 236
A +M K P+ Y +LI + + ++A + EM G+ P R +
Sbjct: 371 GMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCF 430
Query: 237 DTLVEA 242
D + +
Sbjct: 431 DMVTDG 436
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 132/337 (39%), Gaps = 41/337 (12%)
Query: 196 PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHL 255
P Y L + L ++ + ++M + G T ++E Y G + L
Sbjct: 109 PTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVEL 168
Query: 256 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 315
+ V + ++ YN+L+H LC + A ++R M L PD+ +Y+
Sbjct: 169 FNGVPK-------TLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 316 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 375
+++G+ ++++A E EM ++ P + +DL L+N E
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPP-------ARGRDL----LIEGLLNAGYLES 270
Query: 376 KAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYI---VAHCLTIPSY-- 430
EM K+ + ++PD ++ +L+ + K F + ++Y + C+ I +Y
Sbjct: 271 AKEMVSKMT-KGGFVPDIQTFNILIEAISKSGEVEFC--IEMYYTACKLGLCVDIDTYKT 327
Query: 431 IIYDI-----------LIEKCANNEFKSVVEL----VKGFRMRGLVNEAARARDTMLHRN 475
+I + L+ C + K L +KG G+ ++A M +
Sbjct: 328 LIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKA 387
Query: 476 YRPEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFV 512
+ P VY +LI GG A + EM G V
Sbjct: 388 HPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV 424
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 33/287 (11%)
Query: 6 RVSFTVATLKTFRIRGFAAGKATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRL 65
R+ F+VA + R + F A L+ GF + + + A+I L
Sbjct: 75 RIIFSVAVVTLAREKHFVAVSQ------------LLDGFIQNQPDPKSESFAVRAII--L 120
Query: 66 CGEGRI--REAETV--LQEMTDPDCV-TYNTLISAACEAEKNHNLSIPYVRIVELYHQMC 120
G + R +T L++ P V + N L+ A A+ + Y+ + ++Y
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYG--- 177
Query: 121 VRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMG 180
+ P+ TY MIR+ C+ + I+ M K + P A S+ +I F K ++
Sbjct: 178 ---IEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFD 234
Query: 181 KALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 240
+ ++ M + G+ V Y ++IQ LC +++ EA+ L ++ M P TY L+
Sbjct: 235 EVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLI 294
Query: 241 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
+C + + +L + ++ G + P Y LIH LC
Sbjct: 295 HGFCSEENLDEAMNLFEVMVCNG--------YKPDSECYFTLIHCLC 333
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 111/248 (44%), Gaps = 15/248 (6%)
Query: 71 IREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETT 130
++E +V PD TYN+LI C K + I ++ ++ V P+ +T
Sbjct: 274 MKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI-------VWDELKVSGHEPDNST 326
Query: 131 YRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEML 190
YR +I+ C R+++A+ I M G P Y+ ++ K +++ +A ++ +M+
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Query: 191 DKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS 250
+G+ Y +LI L R LF ++ +G T+ + C +G+
Sbjct: 387 QEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLE 446
Query: 251 KVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPD 310
L +E+ +G FS LVT ++L+ G R D ++++ + E L P+
Sbjct: 447 GAVKLVEEMETRG--------FSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Query: 311 EVSYSAVI 318
+ ++A +
Sbjct: 499 VLRWNAGV 506
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 11/216 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYV 110
+ ++N++I LC G+ ++A V E+ +PD TY LI C++ + +
Sbjct: 289 ICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDD------ 342
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ +Y +M P+ Y C++ +V EA + M ++G+ +Y+ +I
Sbjct: 343 -AMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILI 401
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
+N + ++ KG F D + ++ LC + +L A L +EM RG S
Sbjct: 402 DGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFS 461
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
T +L+ + +G + L + + +P
Sbjct: 462 VDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 105/242 (43%), Gaps = 15/242 (6%)
Query: 85 DCVTYNTLISA-ACEAEKNHNLSIPYVRIVELYHQMCV--RELSPNETTYRCMIRLFCDR 141
D +YN I C + + LS+ E+ + V P+ TY +I + C
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSL----FKEMKERSSVYGSSFGPDICTYNSLIHVLCLF 302
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
+ ++A+ + + G P +Y +I CK+ M A+ + EM G PD Y
Sbjct: 303 GKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVY 362
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
L+ R++ EA LF++M+ G+ TY+ L++ G F L ++ +
Sbjct: 363 NCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKK 422
Query: 262 KGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGF 321
KG +V + + S+V LC + + A++++ M D V+ S+++ GF
Sbjct: 423 KG---QFVDAITFSIVGLQ-----LCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF 474
Query: 322 RR 323
+
Sbjct: 475 HK 476
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 10/164 (6%)
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
++ E+++ M V +L+ TY M+ F + + A G+L M E + +Y+ II
Sbjct: 615 KLFEIFNGMGVTDLT--SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVII 672
Query: 171 SRFCKNKEMGKALEMKVEMLDK----GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
K MG+A ++ +LD+ G + D+ Y LI L RL EA LF M
Sbjct: 673 QGLGK---MGRA-DLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKS 728
Query: 227 RGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 270
G++P +Y+T++E G+ + + ++ G LP +VT
Sbjct: 729 NGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 107/261 (40%), Gaps = 32/261 (12%)
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLDKG------IFPDVHAYGLLIQLLCHQRRLLEAR 218
SY+ I F ++ AL + EM ++ PD+ Y LI +LC + +A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 219 DLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVT 278
++ E+ + G P TY L++ C K + + D + G + Y F P +
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCC------KSYRMDDAMRIYGEMQY--NGFVPDTIV 361
Query: 279 YNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 338
YN L+ G ++ EA ++ M + + +Y+ +I G R F L ++
Sbjct: 362 YNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLK 421
Query: 339 QKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVS 395
+K + TFS + C E K E A+KL + + + D V+
Sbjct: 422 KK---------------GQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVT 466
Query: 396 YCLLLNGLHKKATSRFAKRLL 416
LL G HK+ + ++L+
Sbjct: 467 ISSLLIGFHKQGRWDWKEKLM 487
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 168/430 (39%), Gaps = 61/430 (14%)
Query: 158 GLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEA 217
G A +YS+I C+ +G+ ++ M + G+ D +L+ L + A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 218 RDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFS-------KVFHLQDEVIQKGFLPYYVT 270
+ M G YD+++ A K E K+ D +
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 271 SFSPSLVTYNALIHGLCFFQRPD------EALEILRGMPEMLLDPDEVSYSAVISGFRRI 324
S+ P V N L+ GL +R D E L+GM D SY+ I GF
Sbjct: 207 SYLPGTVAVNELLVGL---RRADMRSEFKRVFEKLKGMKRFKF--DTWSYNICIHGFGCW 261
Query: 325 RELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLR 384
+L A L EM ++ + + S D+ T++SL++ C KA+ AL +
Sbjct: 262 GDLDAALSLFKEMKERSSVY------GSSFGPDIC---TYNSLIHVLCLFGKAKDALIVW 312
Query: 385 YQ---AQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCA 441
+ + + PD+ +Y +L+ G K + R + ++ + + +P I+Y+ L++
Sbjct: 313 DELKVSGHEPDNSTYRILIQGCCK--SYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 442 NNEFKSVVELVKGFRMRGLVNEAARAR-------DTMLHRNYRPEGA------------- 481
+ + V E + F +V E RA L RN R E
Sbjct: 371 --KARKVTEACQLFEK--MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 482 ----VYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALIKALYCDERYNEMSWV 537
++++ C G + A + +EM GF + ++ +L+ + R++ +
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKL 486
Query: 538 IRNTLRSCNL 547
+++ +R NL
Sbjct: 487 MKH-IREGNL 495
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 109/273 (39%), Gaps = 22/273 (8%)
Query: 38 NVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQ-EMTDPDCVTYNTLISAA 96
NV+ GF+ ++ + +L G+ +E + E D +Y+ +
Sbjct: 178 NVIGNGFSVSNTKIHNLILRGWS---KLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 97 CEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAE 156
C++ K P+ + V+LY +M R + + Y +IR VE + + R M E
Sbjct: 235 CKSGK------PW-KAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRE 287
Query: 157 KGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLE 216
+G P+ +++ II C++ M A M EM +G PD Y L L +L
Sbjct: 288 RGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEIL- 346
Query: 217 ARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSL 276
LF M+ G+ P TY L+ + G V ++ + + G +P
Sbjct: 347 --SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG--------DTPDS 396
Query: 277 VTYNALIHGLCFFQRPDEALEILRGMPEMLLDP 309
YNA+I L D A E M E L P
Sbjct: 397 AAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 27/293 (9%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISA-ACEAEKNHNLSIP------ 108
SF ++ LC + EAE + C N + + + K HNL +
Sbjct: 152 TSFYNLVDALCEHKHVVEAEEL--------CFGKNVIGNGFSVSNTKIHNLILRGWSKLG 203
Query: 109 -YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
+ + E + +M ++ + +Y + + C + +AV + + M + + +Y+
Sbjct: 204 WWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYN 263
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+I ++ + + + EM ++G P+V + +I+LLC R+ +A + EM R
Sbjct: 264 TVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKR 323
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G P TY L + + S++ L +I+ G P + TY L+
Sbjct: 324 GCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSG--------VRPKMDTYVMLMRKFE 372
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
+ L + + M E PD +Y+AVI + L A E + EM ++
Sbjct: 373 RWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 19/244 (7%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
PD + +N LI A + Y LY Q+ P E TY +I+ +C
Sbjct: 175 PDVICFNLLIDA-------YGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 144 VEEAVGILRLMAEKGLSPHA---DSYSRIISRFCKNK-EMGKALEMKVEMLDKGIFPDVH 199
+E A +L M +SP Y+ I K K +A+++ M P
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
Y L+I L + + L+ EM P TY LV A+ +G K + +++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 260 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
+ G P + YNAL+ P A EI M M +PD SY+ ++
Sbjct: 348 QEDG--------LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 399
Query: 320 GFRR 323
+ R
Sbjct: 400 AYGR 403
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 127/315 (40%), Gaps = 45/315 (14%)
Query: 58 FNAVIKRLCG-EGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+NA I+ L +G EA V Q M P TYN +I+ +A K++
Sbjct: 253 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSY-------MS 305
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+LY +M + PN TY ++ F E+A I + E GL P Y+ ++
Sbjct: 306 WKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 365
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ + A E+ M G PD +Y +++ +A +F+EM G++P
Sbjct: 366 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 425
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP--YYVTSF------------------ 272
+++ L+ AY + +K + E+ + G P + + S
Sbjct: 426 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 485
Query: 273 -------SPSLVTYNALIH---GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
+ + TYN LI+ F +R +E L+ E PD V++++ I +
Sbjct: 486 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELK---EKNFRPDVVTWTSRIGAYS 542
Query: 323 RIRELRKAFELKLEM 337
R + K E+ EM
Sbjct: 543 RKKLYVKCLEVFEEM 557
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 11/223 (4%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+ ++ A++ EG +AE + +++ + PD YN L+ + A PY
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA------GYPY- 373
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E++ M P+ +Y M+ + +A + M G++P S+ ++
Sbjct: 374 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 433
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
S + K +++ K + EM + G+ PD ++ L + + + EM +
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 493
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 273
TY+ L+ Y G ++ L E+ +K F P VT S
Sbjct: 494 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 536
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 137/336 (40%), Gaps = 36/336 (10%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA--DSYSRIISRFCKNKEMGK 181
LSP I+ D ++V + +G L S HA D + + NK+
Sbjct: 107 LSPIAQKILSFIQKETDPDKVADVLGALP-------STHASWDDLINVSVQLRLNKKWDS 159
Query: 182 ALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 240
+ + +L K F PDV + LLI + + EA L+ ++L P TY L+
Sbjct: 160 IILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLI 219
Query: 241 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEIL 299
+AYC+ G + EV+ ++V+ + + YNA I GL + +EA+++
Sbjct: 220 KAYCMAGLIERA-----EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 274
Query: 300 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS 359
+ M P +Y+ +I+ + + + +++L EM + C P
Sbjct: 275 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKP-------------- 319
Query: 360 NHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFAKRLL 416
N T+++LVN + E E A ++ Q Q PD Y L+ + A
Sbjct: 320 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE-- 377
Query: 417 LFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELV 452
+F ++ H P Y+I+++ S E V
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 22/288 (7%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTDPDCV----TYNTLISAACEAEKNHNLSIPYVRIV 113
F VI GRI EA V ++ + CV T N L+ ++ L +
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLEL------VP 164
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRF 173
E+ + C + E+T+ +I C V+ A ++R M++ + YSR++S
Sbjct: 165 EILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSV 224
Query: 174 CKNKEMGKALEM--KVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
CK+K+ ++ +E L K F P + Y ++++ L R E + +M +
Sbjct: 225 CKHKD-SSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVE 283
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ 290
P Y +++ ++ K L DE++ +P + TYN I+GLC
Sbjct: 284 PDLVCYTIVLQGVIADEDYPKADKLFDELLL--------LGLAPDVYTYNVYINGLCKQN 335
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMD 338
+ AL+++ M ++ +P+ V+Y+ +I + +L +A L EM+
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEME 383
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 142/343 (41%), Gaps = 43/343 (12%)
Query: 83 DPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
+P Y +I ++ + N+S LYH + E+ +R +I +
Sbjct: 69 EPTPQAYRFVIKTLAKSSQLENISSV------LYHLEVSEKFDTPESIFRDVIAAYGFSG 122
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDK----GIFPDV 198
R+EEA+ + + P A + + ++ + ++ +LE+ E+L K G+ +
Sbjct: 123 RIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQ---SLELVPEILVKACRMGVRLEE 179
Query: 199 HAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE---FSKVFHL 255
+G+LI LC + A +L + M + R Y L+ + C + F + +L
Sbjct: 180 STFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYL 239
Query: 256 QDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYS 315
+D ++K T FSP L Y ++ L R E + +L M ++PD V Y+
Sbjct: 240 ED--LRK-------TRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYT 290
Query: 316 AVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAED 375
V+ G + KA +L D+ L D+ ++ + +N C ++
Sbjct: 291 IVLQGVIADEDYPKADKL------------FDELLLLGLAPDVYTYNVY---INGLCKQN 335
Query: 376 KAEMALKLRYQAQYL---PDSVSYCLLLNGLHKKATSRFAKRL 415
E ALK+ L P+ V+Y +L+ L K AK L
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTL 378
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 12/231 (5%)
Query: 37 PNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVT----YNTL 92
P +L+ G E +F +I LC G + A +++ M+ + Y+ L
Sbjct: 164 PEILVKACRMGVRLEES---TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRL 220
Query: 93 ISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILR 152
+S+ C+ + + + + + SP Y ++R + R +E V +L
Sbjct: 221 LSSVCKHKDSSCFDV-----IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLN 275
Query: 153 LMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQR 212
M + P Y+ ++ +++ KA ++ E+L G+ PDV+ Y + I LC Q
Sbjct: 276 QMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQN 335
Query: 213 RLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
+ A + M G P TY+ L++A G+ S+ L E+ G
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNG 386
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYV 110
L + V++ L GR +E +VL +M +PD V Y ++ E Y
Sbjct: 251 LRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADED-------YP 303
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
+ +L+ ++ + L+P+ TY I C +N +E A+ ++ M + G P+ +Y+ +I
Sbjct: 304 KADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILI 363
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
K ++ +A + EM G+ + H + ++I ++ A L +E +
Sbjct: 364 KALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVF 423
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHL 255
+ ++ C KG + L
Sbjct: 424 VKSSRIEEVISRLCEKGLMDQAVEL 448
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 19/244 (7%)
Query: 84 PDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNR 143
PD + +N LI A + Y LY Q+ P E TY +I+ +C
Sbjct: 153 PDVICFNLLIDA-------YGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 144 VEEAVGILRLMAEKGLSPHA---DSYSRIISRFCKNK-EMGKALEMKVEMLDKGIFPDVH 199
+E A +L M +SP Y+ I K K +A+++ M P
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 200 AYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV 259
Y L+I L + + L+ EM P TY LV A+ +G K + +++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 260 IQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVIS 319
+ G P + YNAL+ P A EI M M +PD SY+ ++
Sbjct: 326 QEDG--------LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVD 377
Query: 320 GFRR 323
+ R
Sbjct: 378 AYGR 381
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 127/315 (40%), Gaps = 45/315 (14%)
Query: 58 FNAVIKRLCG-EGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRI 112
+NA I+ L +G EA V Q M P TYN +I+ +A K++
Sbjct: 231 YNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSY-------MS 283
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+LY +M + PN TY ++ F E+A I + E GL P Y+ ++
Sbjct: 284 WKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMES 343
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ + A E+ M G PD +Y +++ +A +F+EM G++P
Sbjct: 344 YSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPT 403
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP--YYVTSF------------------ 272
+++ L+ AY + +K + E+ + G P + + S
Sbjct: 404 MKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILA 463
Query: 273 -------SPSLVTYNALIH---GLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR 322
+ + TYN LI+ F +R +E L+ E PD V++++ I +
Sbjct: 464 EMENGPCTADISTYNILINIYGKAGFLERIEELFVELK---EKNFRPDVVTWTSRIGAYS 520
Query: 323 RIRELRKAFELKLEM 337
R + K E+ EM
Sbjct: 521 RKKLYVKCLEVFEEM 535
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 11/223 (4%)
Query: 55 LVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYV 110
+ ++ A++ EG +AE + +++ + PD YN L+ + A PY
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRA------GYPY- 351
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRII 170
E++ M P+ +Y M+ + +A + M G++P S+ ++
Sbjct: 352 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 411
Query: 171 SRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMS 230
S + K +++ K + EM + G+ PD ++ L + + + EM +
Sbjct: 412 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 471
Query: 231 PGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS 273
TY+ L+ Y G ++ L E+ +K F P VT S
Sbjct: 472 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTS 514
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 137/336 (40%), Gaps = 36/336 (10%)
Query: 124 LSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHA--DSYSRIISRFCKNKEMGK 181
LSP I+ D ++V + +G L S HA D + + NK+
Sbjct: 85 LSPIAQKILSFIQKETDPDKVADVLGALP-------STHASWDDLINVSVQLRLNKKWDS 137
Query: 182 ALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 240
+ + +L K F PDV + LLI + + EA L+ ++L P TY L+
Sbjct: 138 IILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLI 197
Query: 241 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQ-RPDEALEIL 299
+AYC+ G + EV+ ++V+ + + YNA I GL + +EA+++
Sbjct: 198 KAYCMAGLIERA-----EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 252
Query: 300 RGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLS 359
+ M P +Y+ +I+ + + + +++L EM + C P
Sbjct: 253 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKP-------------- 297
Query: 360 NHDTFSSLVNDYCAEDKAEMALKLRYQAQ---YLPDSVSYCLLLNGLHKKATSRFAKRLL 416
N T+++LVN + E E A ++ Q Q PD Y L+ + A
Sbjct: 298 NICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE-- 355
Query: 417 LFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELV 452
+F ++ H P Y+I+++ S E V
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 19/285 (6%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNHNLSIPYVRI 112
++N VI+ L ++ A ++ + C TYN L+ N +PY +
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFL------NKGLPY-KA 297
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
E+Y M + + +TY +I R++ A + + M E+ L P +S ++
Sbjct: 298 FEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDS 357
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
K + ++++ +EM G P + LI +L A L+ EM G P
Sbjct: 358 MGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRP 292
Y ++E++ G+ + ++ + GFLP +PS TY+ L+ +
Sbjct: 418 FGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP------TPS--TYSCLLEMHAGSGQV 469
Query: 293 DEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM 337
D A++I M L P SY ++++ R + A ++ LEM
Sbjct: 470 DSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 145/348 (41%), Gaps = 59/348 (16%)
Query: 69 GRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL--YHQMCVRELSP 126
GRIREA V EM + D + + T++SA Y R++++ + + +
Sbjct: 918 GRIREARKVFDEMPERDDIAWTTMVSA-------------YRRVLDMDSANSLANQMSEK 964
Query: 127 NETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMK 186
NE T C+I + +E+A + M K + S++ +I + +NK +A+ +
Sbjct: 965 NEATSNCLINGYMGLGNLEQAESLFNQMPVKDII----SWTTMIKGYSQNKRYREAIAVF 1020
Query: 187 VEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLK 246
+M+++GI PD +I H L +++ L G LV+ Y
Sbjct: 1021 YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMY--- 1077
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
SK L+ ++ LP +L +N++I GL EAL++ M
Sbjct: 1078 ---SKCGSLERALLVFFNLP------KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMES 1128
Query: 307 LDPDEVSYSAVISGFRR---IRELRKAFELKLEMDQKETCWPLDQDTNESLVKD---LSN 360
+ P+ V++ +V + + E R+ + S++ D +SN
Sbjct: 1129 VKPNAVTFVSVFTACTHAGLVDEGRRIY--------------------RSMIDDYSIVSN 1168
Query: 361 HDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNG--LHKK 406
+ + +V+ + AL+L ++ P++V + LL+G +HK
Sbjct: 1169 VEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKN 1216
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/402 (20%), Positives = 158/402 (39%), Gaps = 69/402 (17%)
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
R++++F K L++ V + + P+V Y L + + + +L+ ML
Sbjct: 806 RLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRD 865
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
+SP TY +LV+A F + LQ + + GF F + T LI
Sbjct: 866 SVSPSSYTYSSLVKASSFASRFGE--SLQAHIWKFGF------GFHVKIQT--TLIDFYS 915
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP-- 345
R EA ++ MPE D+++++ ++S +RR+ ++ A L +M +K
Sbjct: 916 ATGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNC 971
Query: 346 --------LDQDTNESLVKDLSNHD--TFSSLVNDYCAEDKAEMALKLRY---QAQYLPD 392
+ + ESL + D ++++++ Y + A+ + Y + +PD
Sbjct: 972 LINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPD 1031
Query: 393 SVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILI--------EKCANNE 444
V+ +++ K + H T+ + + D+ I KC + E
Sbjct: 1032 EVTMSTVISACAHLGVLEIGKEV-------HMYTLQNGFVLDVYIGSALVDMYSKCGSLE 1084
Query: 445 FKSVV-------------ELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHC 491
+V +++G G EA + M + +P AV + +F C
Sbjct: 1085 RALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPN-AVTFVSVFTAC 1143
Query: 492 I-GGNVHKAYDMYKEML----------HYGFVCHMFSVLALI 522
G V + +Y+ M+ HYG + H+FS LI
Sbjct: 1144 THAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLI 1185
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 18/286 (6%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVRIVE 114
N+++ L G++ + +M PD VTYNTL+ A C KN Y + +E
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLL-AGCIKVKN-----GYPKAIE 223
Query: 115 LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFC 174
L ++ + + Y ++ + R EEA ++ M +G SP+ YS +++ +
Sbjct: 224 LIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYS 283
Query: 175 KNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGR 234
+ KA E+ EM G+ P+ L+++ +R+L E+ G +
Sbjct: 284 WKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEM 343
Query: 235 TYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDE 294
Y L++ G+ + + D++ KG ++ S+ +I LC +R E
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRS---DGYANSI-----MISALCRSKRFKE 395
Query: 295 ALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
A E+ R D V + ++ + R E+ + +MD++
Sbjct: 396 AKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQ 441
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 98/222 (44%), Gaps = 15/222 (6%)
Query: 126 PNETT----YRCMIRLFC--DRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE- 178
P+E+T Y C L C +++ + + M GL P +Y+ +++ K K
Sbjct: 158 PDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG 217
Query: 179 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDT 238
KA+E+ E+ GI D YG ++ + R EA + Q+M + G SP Y +
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSS 277
Query: 239 LVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEI 298
L+ +Y KG++ K L E+ G +P V + L Y I G F D + E+
Sbjct: 278 LLNSYSWKGDYKKADELMTEMKSIGLVPNKVM-MTTLLKVY---IKGGLF----DRSREL 329
Query: 299 LRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
L + +E+ Y ++ G + +L +A + +M K
Sbjct: 330 LSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGK 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT----DPDCVTYNTLISAACEAEKNHNLSIPYVR 111
V + V+ GR EAE +Q+M P+ Y++L+++ ++ Y +
Sbjct: 238 VMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNS-------YSWKGDYKK 290
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
EL +M L PN+ +++++ + + +L + G + + Y ++
Sbjct: 291 ADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMD 350
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
K ++ +A + +M KG+ D +A ++I LC +R EA++L ++
Sbjct: 351 GLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKC 410
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT 270
+T++ AYC GE V + ++ ++ P Y T
Sbjct: 411 DLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNT 449
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 57 SFNAVIKRLCGEGRIREAETVLQEM-----TDPDCVTYNTLISAACEAEKNHNLSIPYVR 111
S V+ LC G I A +++EM + VT+ ++I + L +
Sbjct: 212 SLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDL---- 267
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+++L + V + +Y+ +I F +VEEA ++ +M +K L + Y+ I++
Sbjct: 268 VLKLMEKESVM---LDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMN 324
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ + + K +E+ EM +G+ P+ Y +L+ LC ++ EA E+ +
Sbjct: 325 GYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEI 384
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLP 266
Y TL E G K + E+I+ GF+P
Sbjct: 385 DEEMYSTLSEECYRVGMIDKSLEVVAEMIRDGFIP 419
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/465 (19%), Positives = 180/465 (38%), Gaps = 70/465 (15%)
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
T+NTLI +A + ++ + L+ +M + + T+ MI + EA
Sbjct: 307 TFNTLIDLYGKAGRLNDAA-------NLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEA 359
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
+L+ M EKG+SP +Y+ ++S ++ ALE ++ G+FPD + ++ +
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 208 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKV------FHLQ----- 256
LC ++ + E + EM + + +++ Y +G + F L
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS 479
Query: 257 -------DEVIQKGFLPYYVTSF---------SPSLVTYNALIHGLCFFQRPDEALEILR 300
D +KG T F ++ YN +I + ++AL + +
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFK 539
Query: 301 GMPEMLLDPDEVSYSAV---ISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD 357
GM PDE +Y+++ ++G + E ++ L+ K C T +++
Sbjct: 540 GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGC-----KTYAAMIAS 594
Query: 358 LSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLL 417
S V+ Y A +K + P+ V Y L+NG FA+ ++
Sbjct: 595 YVRLGLLSDAVDLYEAMEKTGVK----------PNEVVYGSLING--------FAESGMV 636
Query: 418 FYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYR 477
+ + + ++ E + + L+K + G + EA R D M
Sbjct: 637 EEAIQY---------FRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGG 687
Query: 478 PEGAVYNLLIFDHCIGGNVHKAYDMYKEMLHYGFVCHMFSVLALI 522
P+ A N ++ G V +A ++ + G C + S ++
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMM 731
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 104/502 (20%), Positives = 194/502 (38%), Gaps = 106/502 (21%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
V+FN +I G + EAE++L++M + PD TYN L+S +A
Sbjct: 341 VTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIE-------A 393
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+E Y ++ L P+ T+R ++ + C R V E ++ M + S I+
Sbjct: 394 ALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQ 453
Query: 172 RFCKNKEM--GKALEMKVEM----------------LDKGIF-----------------P 196
+ + KAL + ++ +KG++
Sbjct: 454 MYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRN 513
Query: 197 DVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQ 256
DV Y ++I+ + +A LF+ M +G P TY++L + L G L
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQ--MLAG-----VDLV 566
Query: 257 DEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSA 316
DE Q+ + P TY A+I +A+++ M + + P+EV Y +
Sbjct: 567 DEA-QRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGS 625
Query: 317 VISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDY----C 372
+I+GF + +A + M++ SNH +SL+ Y C
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGV---------------QSNHIVLTSLIKAYSKVGC 670
Query: 373 AEDKAEMALKLRYQAQYLPDSVSYCLLLN-----GLHKKATSRFAKRLLLFYIVAHCLTI 427
E+ + K++ ++ PD + +L+ G+ +A S
Sbjct: 671 LEEARRVYDKMK-DSEGGPDVAASNSMLSLCADLGIVSEAES------------------ 711
Query: 428 PSYIIYDILIEK--CANNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNL 485
I++ L EK C F +++ L KG G+++EA + M + +N
Sbjct: 712 ----IFNALREKGTCDVISFATMMYLYKGM---GMLDEAIEVAEEMRESGLLSDCTSFNQ 764
Query: 486 LIFDHCIGGNVHKAYDMYKEML 507
++ + G + + +++ EML
Sbjct: 765 VMACYAADGQLSECCELFHEML 786
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 51 TEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYV 110
+E+ VS+N+++ L G +R+A + EM D +++NT++ +
Sbjct: 181 SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCRE-------MS 233
Query: 111 RIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD--SYSR 168
+ EL+ +M R N ++ M+ + +E A R+M +K P + +++
Sbjct: 234 KAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMA----RVMFDKMPLPAKNVVTWTI 285
Query: 169 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR- 227
II+ + + + +A + +M+ G+ D A + I C + LL +L R
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAV-ISILAACTESGLLSLGMRIHSILKRS 344
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
+ + L++ Y G K F + +++ +K LV++N ++HGL
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK------------DLVSWNTMLHGLG 392
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVI 318
EA+E+ M + PD+V++ AV+
Sbjct: 393 VHGHGKEAIELFSRMRREGIRPDKVTFIAVL 423
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/370 (19%), Positives = 145/370 (39%), Gaps = 68/370 (18%)
Query: 161 PHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDL 220
P+ + +I +N + +A + EM G+F D Y L++ Q L + +
Sbjct: 80 PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMM 139
Query: 221 FQEMLLRGMSPGGRTYDTLVEAYCLKGEFS-----KVFHLQDEVIQKGFLPYYVTSFSPS 275
+ G+S + L++ Y G K+F E
Sbjct: 140 HNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSE---------------RD 184
Query: 276 LVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL 335
V++N+++ GL +A + MP+ D +S++ ++ G+ R RE+ KAFEL
Sbjct: 185 TVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFE 240
Query: 336 EMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLP--DS 393
+M ++ T ++S++V Y EMA ++ + LP +
Sbjct: 241 KMPERNTV-------------------SWSTMVMGYSKAGDMEMA-RVMFDKMPLPAKNV 280
Query: 394 VSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVK 453
V++ +++ G +K + A RL+ D ++ + +V+ ++
Sbjct: 281 VTWTIIIAGYAEKGLLKEADRLV-----------------DQMVASGLKFDAAAVISILA 323
Query: 454 GFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMY-----KEMLH 508
GL++ R + N V N L+ + GN+ KA+D++ K+++
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS 383
Query: 509 YGFVCHMFSV 518
+ + H V
Sbjct: 384 WNTMLHGLGV 393
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 90/196 (45%), Gaps = 6/196 (3%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
S+ ++K C + A V+++M + + ++ + A + L VR +
Sbjct: 374 TSYEKLVKYSCDSNEVVTALDVVEKMGEAGLMISADILHSLLHA-IDEVLEFDLVR--RI 430
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
+ MC + + PN +R +IRL E A +L + L P++ ++ I++ + +
Sbjct: 431 HSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFR 490
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
K + AL + +M + G+ PD +G LI C Q + ++EM G+ R
Sbjct: 491 EKNVSSALMVVKQMKEAGVKPDSITFGYLIN-NCTQEDAITK--YYEEMKQAGVQATKRI 547
Query: 236 YDTLVEAYCLKGEFSK 251
Y +L++AY G+F K
Sbjct: 548 YMSLIDAYAASGKFEK 563
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 142 NRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAY 201
N+ A+ L M E G+ P Y+ +I + + E+ KA EM EM KG P+V Y
Sbjct: 703 NKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTY 762
Query: 202 GLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQ 261
+I+ LC EA L +EM RG +P Y TLV G+ S+ + E+++
Sbjct: 763 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVK 822
Query: 262 KGFLPYYVT 270
KG + V+
Sbjct: 823 KGHYVHLVS 831
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 228 GMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
G+ P Y TL++ Y + GE K + E+ KG LP ++ TYN++I GLC
Sbjct: 719 GIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLP--------NVFTYNSMIRGLC 770
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQK 340
EA +L+ M +P+ V YS ++ R+ +L +A ++ EM +K
Sbjct: 771 MAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKK 823
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 74 AETVLQEM----TDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNET 129
A T L M DP + Y TLI + +S + E++ +M V+ PN
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDG-------YVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
TY MIR C EA +L+ M +G +P+ YS ++ K ++ +A ++ EM
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 190 LDKG 193
+ KG
Sbjct: 821 VKKG 824
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 135/345 (39%), Gaps = 59/345 (17%)
Query: 26 KATTEKGLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPD 85
K EK LV ++ GF + T L + + V+ + G +R ++ D +
Sbjct: 116 KGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFG---MRCHGVAVKTGLDKN 172
Query: 86 CVTYNTLIS--AACEAEKNHNLSIPY-VRIVELYHQMCVRELSPNETTYRCMIRLFCDRN 142
N L+S A C + Y VR+ E Q PNE +Y +I N
Sbjct: 173 IFVGNALLSMYAKC------GFIVDYGVRVFESLSQ-------PNEVSYTAVIGGLAREN 219
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIIS-----RFCKN------KEMGKALEMKVEMLD 191
+V EAV + RLM EKG+ + S I+S C + E+GK ++ L
Sbjct: 220 KVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGK--QIHCLALR 277
Query: 192 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 251
G D+H L+++ + + A +F EM + +++ ++ + + K
Sbjct: 278 LGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVV----SWNIMIVGFGQEYRSDK 333
Query: 252 VFHLQDEVIQKGFLPYYVTSFS-----------------------PSLVTYNALIHGLCF 288
+ GF P VT S PS+ +NA++ G
Sbjct: 334 SVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSN 393
Query: 289 FQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
++ +EA+ R M L PD+ + S ++S R+R L ++
Sbjct: 394 YEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%)
Query: 130 TYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEM 189
TY M+ +F + R++ + LM EKG+ +Y+ +I + ++ A+ + EM
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 190 LDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGE 248
D G P V +Y +++L R+ EA ++++EML +SP TY L+E G+
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGK 242
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 86/212 (40%), Gaps = 16/212 (7%)
Query: 75 ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCM 134
ET E+ D + +IS+ ++N V + L +QM R + + +
Sbjct: 336 ETPTAEVNDTKNSDDSRVISSVLLMKQN------LVAVDILLNQMRDRNIKLDSFVVSAI 389
Query: 135 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 194
I CDR R E A E G+ +Y +I F ++ E+ K +E+ EM+
Sbjct: 390 IETNCDRCRTEGASLAFDYSLEMGIHLKKSAYLALIGNFLRSNELPKVIEVVKEMVKAQH 449
Query: 195 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 254
+ +LI L RR A D+F LL G Y L++ Y G K
Sbjct: 450 SLGCYQGAMLIHRLGFGRRPRLAADVFD--LLPDDQKGVAAYTALMDVYISAGSPEKAMK 507
Query: 255 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGL 286
+ E+ ++ + PSL TY+ L+ GL
Sbjct: 508 ILREMREREIM--------PSLGTYDVLLSGL 531
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 10/205 (4%)
Query: 32 GLVSPPNVLIPGFAAGKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDP----DCV 87
G + VLI A G+ C+ F+ ++ L + RI EA V++ M D
Sbjct: 139 GRIDDALVLINDMAIGEFGLSTCV--FHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVT 196
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
+YN +++ C S R++ + +SP+ TY ++ C RVE A
Sbjct: 197 SYNYFLTSHCYDGDVAEAS----RVLRKMEEEEEGVMSPDTRTYDALVLGACKSGRVEAA 252
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
+ ILR M E+GLS +++ +I ++ ++E + K D G L
Sbjct: 253 MAILRRMEEEGLSVLYATHAHVIGEMVESGYYALSVEFVMAYAGKDKRLDEENLGSLASK 312
Query: 208 LCHQRRLLEARDLFQEMLLRGMSPG 232
L ++R EA+ + +EM +RG+ G
Sbjct: 313 LIKRKRFKEAKMVLKEMSVRGLRMG 337
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 174/413 (42%), Gaps = 54/413 (13%)
Query: 38 NVLIPGF-AAGK---------ATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCV 87
NVL+ G+ AGK K +VS ++++ C GRI +A ++ MT+ + +
Sbjct: 181 NVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI 240
Query: 88 TYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEA 147
T+ +I +A + ++R+ + ++ N T M + D R E
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQ------EGDVKVNSNTLAVMFKACRDFVRYREG 294
Query: 148 VGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQL 207
I L++ L + ++S + K MG+A + M +K D ++ LI
Sbjct: 295 SQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITG 350
Query: 208 LCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPY 267
L ++++ EA +LF++M + M ++ +++ + KGE SK L G +P
Sbjct: 351 LVQRKQISEAYELFEKMPGKDMV----SWTDMIKGFSGKGEISKCVELF------GMMP- 399
Query: 268 YVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIREL 327
+T+ A+I +EAL M + + P+ ++S+V+S + +L
Sbjct: 400 -----EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 328 RKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQA 387
+ ++ + ++V DLS + SLV+ YC A K+ +
Sbjct: 455 IEGLQIH------------GRVVKMNIVNDLSVQN---SLVSMYCKCGNTNDAYKI-FSC 498
Query: 388 QYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC 440
P+ VSY +++G + K L LF ++ P+ + + L+ C
Sbjct: 499 ISEPNIVSYNTMISGYSYNGFGK--KALKLFSMLESSGKEPNGVTFLALLSAC 549
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 109/532 (20%), Positives = 203/532 (38%), Gaps = 113/532 (21%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKNHNLSIPYVR 111
+S+ +I L G + REA EM P+ T+ L+ A+ L + + +
Sbjct: 191 ISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASS------FLGLEFGK 244
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
+ + + VR + N ++ + +++E+AV +L E+ + ++ ++S
Sbjct: 245 TI--HSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFL----WTSVVS 298
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
F +N +A+ +EM G+ P+ Y ++ L R L + + + + G
Sbjct: 299 GFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFED 358
Query: 232 GGRTYDTLVEAY--CLKGEF--SKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
+ LV+ Y C E S+VF SP++V++ LI GL
Sbjct: 359 STDVGNALVDMYMKCSASEVEASRVFGAM---------------VSPNVVSWTTLILGLV 403
Query: 288 FFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKL---------EM- 337
+ +L M + ++P+ V+ S V+ ++R +R+ E+ EM
Sbjct: 404 DHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMV 463
Query: 338 ------DQKETCWPLDQDTNESLVKDLSNHD--TFSSLVNDYCAEDKAEMALK------- 382
D + +D N +++ + D T++SLV + K EMAL
Sbjct: 464 VGNSLVDAYASSRKVDYAWN--VIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYG 521
Query: 383 --LRYQAQYLPDSVSYCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYI-----IYDI 435
+R LP +S L L K L HC ++ S + +
Sbjct: 522 DGIRMDQLSLPGFISASANLGALET------GKHL-------HCYSVKSGFSGAASVLNS 568
Query: 436 LIE---KCANNE-FKSVVE------------LVKGFRMRGLVNEAARARDTMLHRNYRPE 479
L++ KC + E K V E LV G G ++ A A + M + P+
Sbjct: 569 LVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPD 628
Query: 480 GAVYNLLIFDHCIGGNV-----------HKAYDMYKEMLHYGFVCHMFSVLA 520
+ L++ C G + K Y++ ++ HY H+ +L
Sbjct: 629 SVTF-LILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHY---VHLVGILG 676
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 119/279 (42%), Gaps = 22/279 (7%)
Query: 69 GRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNE 128
G I +A+ V + D + +NTL++A E+ LS +R L++ M + + PN
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAES----GLSGEALR---LFYGMQLEGVPPNV 476
Query: 129 TTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVE 188
T+ +I +V+EA + M G+ P+ S++ +++ +N +A+ +
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRK 536
Query: 189 MLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGG--RTYDTLVEAYCLK 246
M + G+ P+ + + + H L R + ++R + +LV+ Y
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTI-HGYIIRNLQHSSLVSIETSLVDMYAKC 595
Query: 247 GEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEML 306
G+ +K + + + L NA+I + EA+ + R + +
Sbjct: 596 GDINKAEKV------------FGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG 643
Query: 307 LDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
L PD ++ + V+S ++ +A E+ ++ K + P
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKP 682
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 52 EKCLVSFNAVIKRLCGEGRIREAETVLQ----EMTDPDCVTYNTLISAACEAEKNHNLSI 107
EK +V++N +I +G + +A + Q E DCVT TL+SAA E NL +
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTE---NLKL 393
Query: 108 PYVRIVELYHQMCVR-ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSY 166
+ V+ Y C+R + ++ ++ + +A + EK L +
Sbjct: 394 G--KEVQCY---CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL----W 444
Query: 167 SRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLL 226
+ +++ + ++ G+AL + M +G+ P+V + L+I L ++ EA+D+F +M
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 227 RGMSPGGRTYDTLVEAYCLKG 247
G+ P ++ T++ G
Sbjct: 505 SGIIPNLISWTTMMNGMVQNG 525
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 122/286 (42%), Gaps = 27/286 (9%)
Query: 76 TVLQEMTDPDCVTYNTLISAACEAEK-NHNLSIPYVRIVELYHQM----CVRELSPNETT 130
T++ + DP +T AC+AE N+++ Y R V V E+ +
Sbjct: 43 TLVNDERDPKFITEK--FKKACQAEWFRKNIAV-YERTVRRLAAAKKFEWVEEILEEQNK 99
Query: 131 YRCM---------IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGK 181
Y M I L+ E A + M E+ A S++ +++ +K+
Sbjct: 100 YPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDL 159
Query: 182 ALEMKVEMLDK-GIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLV 240
+ E+ K I PDV +Y LI+ LC + EA L E+ +G+ P T++ L+
Sbjct: 160 VEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILL 219
Query: 241 EAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILR 300
KG+F + + +++K + + +YNA + GL + +E + +
Sbjct: 220 HESYTKGKFEEGEQIWARMVEK--------NVKRDIRSYNARLLGLAMENKSEEMVSLFD 271
Query: 301 GMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPL 346
+ L PD +++A+I GF +L +A E+ +K C PL
Sbjct: 272 KLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEI-EKNGCRPL 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 88/208 (42%), Gaps = 32/208 (15%)
Query: 47 GKATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD----PDCVTYNTLISAACEAEKN 102
GK + E + S+N +IK LCG+G EA ++ E+ + PD +T+N L+ + K
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 103 HNLSIPYVRIVE----------------------------LYHQMCVRELSPNETTYRCM 134
+ R+VE L+ ++ EL P+ T+ M
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 135 IRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGI 194
I+ F +++EA+ + + + G P ++ ++ CK ++ A E+ E+ K +
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 195 FPDVHAYGLLIQLLCHQRRLLEARDLFQ 222
D ++ L + EA ++ +
Sbjct: 349 LVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 102/236 (43%), Gaps = 19/236 (8%)
Query: 57 SFNAVIKRLCGE-GRIREAETVLQEMTDPDC----VTYNTLISAACEAEKNHNLSIPYVR 111
F A I L G G A+ V EM + +C +++N L++A C K +L +
Sbjct: 107 GFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNA-CVNSKKFDLVEGIFK 165
Query: 112 IVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIIS 171
EL ++ + P+ +Y +I+ C + EAV ++ + KGL P +++ ++
Sbjct: 166 --ELPGKLSI---EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLH 220
Query: 172 RFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
+ + ++ M++K + D+ +Y + L + + E LF ++ + P
Sbjct: 221 ESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKP 280
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC 287
T+ +++ + +G+ + E+ + G P +N+L+ +C
Sbjct: 281 DVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLK--------FVFNSLLPAIC 328
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 94/238 (39%), Gaps = 33/238 (13%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTD-----PDCVTYNTLISAACEAEKNHNLSIPYV 110
V++N +I G E E+VL +M + PD T N++I + + Y
Sbjct: 251 VTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYS 310
Query: 111 RI---------------------VELYHQMCV-------RELSPNETTYRCMIRLFCDRN 142
R +Y +MC R S TY +I F
Sbjct: 311 RFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAG 370
Query: 143 RVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYG 202
R+E+ + R M +G+ P++ +Y +++ + K + K + ++++ + D +
Sbjct: 371 RIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFN 430
Query: 203 LLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVI 260
+I L ++L+ +M R P T+ T+++ Y G F V L+ ++I
Sbjct: 431 CIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 120/283 (42%), Gaps = 24/283 (8%)
Query: 126 PNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKA--- 182
P TY + ++ + + ++A + +M +GL P D Y+ +IS + K++ + KA
Sbjct: 142 PRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFST 201
Query: 183 LEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEA 242
LE + D PDV + +LI C R + + EM G+ TY+T+++
Sbjct: 202 LEYMKSVSD--CKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDG 259
Query: 243 YCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGM 302
Y G F ++ + ++I+ G P + T N++I + +
Sbjct: 260 YGKAGMFEEMESVLADMIEDG-------DSLPDVCTLNSIIGSYGNGRNMRKMESWYSRF 312
Query: 303 PEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKDLSNHD 362
M + PD +++ +I F + +K + M+++ + L T +++
Sbjct: 313 QLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKR--FFSLTTVTYNIVIETFGKAG 370
Query: 363 TFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 405
E ++ K++YQ P+S++YC L+N K
Sbjct: 371 RI---------EKMDDVFRKMKYQG-VKPNSITYCSLVNAYSK 403
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 110/250 (44%), Gaps = 21/250 (8%)
Query: 75 ETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCVRELSPNETTYRCM 134
+++L++ P+ V NTLI++ +A K + Y + L H+ P+E T+ +
Sbjct: 308 QSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHK-------PDEYTWNAL 360
Query: 135 IRLFCDRNRVEEAVGILRLMAEKGLSPHADS-YSRIISRFCKNKEMGKALEMKVEMLDKG 193
+ NR E+ + + ++ + L + Y+ + K KA+++ EM G
Sbjct: 361 LTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSG 420
Query: 194 IFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVF 253
+ +Y L+I R+ A +++ M R P TY +LV + C+ G
Sbjct: 421 LTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-CIWGS----- 474
Query: 254 HLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVS 313
L DEV + P + YNA IHG+C + A E+ M EM L+PD +
Sbjct: 475 -LWDEVED------ILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKT 527
Query: 314 YSAVISGFRR 323
+ ++ ++
Sbjct: 528 RAMMLQNLKK 537
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 188 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
+M+D GI PDV A L++ R + R+L EM +G P G++Y++LV A+ L G
Sbjct: 238 QMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSG 292
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA---LEILRGMPE 304
E E+I+ G V F ++Y L+ C + DEA LE+LR
Sbjct: 293 EIDDAVKCLWEMIENG----RVVDF----ISYRTLVDESCRKGKYDEATRLLEMLREKQL 344
Query: 305 MLLDPDE 311
+ +D D+
Sbjct: 345 VDIDSDD 351
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
Query: 188 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
+M+D GI PDV A L++ R + R+L EM +G P G++Y++LV A+ L G
Sbjct: 213 QMVDSGIEPDVFALNCLVK-----GRTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSG 267
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEA---LEILRGMPE 304
E E+I+ G V F ++Y L+ C + DEA LE+LR
Sbjct: 268 EIDDAVKCLWEMIENG----RVVDF----ISYRTLVDESCRKGKYDEATRLLEMLREKQL 319
Query: 305 MLLDPDE 311
+ +D D+
Sbjct: 320 VDIDSDD 326
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 25/283 (8%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD---PDCVT-YNTLISAACEAEKNHNLSIPYVRIV 113
+ V L GR EA VL+EM D P+ Y+ LI A EA + V I
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEARE--------VVIT 302
Query: 114 E-LYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
E L+ + ++L + ++ ++ +E + ++ M + L I++
Sbjct: 303 EKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNG 362
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
F K + +A+++ + + Y + I C + +A LF EM+ +G
Sbjct: 363 FSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKC 422
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI--HGLCFFQ 290
Y +++ Y S L ++ Q+G P++ YN+LI HG
Sbjct: 423 VVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGC--------KPNIWIYNSLIDMHGRAMDL 474
Query: 291 RPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFEL 333
R E +I + M + PD+VSY+++IS + R +EL + EL
Sbjct: 475 RRAE--KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVEL 515
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 93/236 (39%), Gaps = 26/236 (11%)
Query: 109 YVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSR 168
+ V++Y E + TY I +C + +A + M +KG +YS
Sbjct: 369 FAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSN 428
Query: 169 IISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRG 228
I+ + K + + A+ + +M +G P++ Y LI + L A +++EM
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAK 488
Query: 229 MSPGGRTYDTLVEAYCLKGEFSKVFHLQDEV------IQKGFLPYYVTSFSPSLVTYNAL 282
+ P +Y +++ AY E + L E I + V FS +
Sbjct: 489 VLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKT------- 541
Query: 283 IHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFR------RIRELRKAFE 332
R DE + +L+ M D YS+ ++ R +IR L+++F+
Sbjct: 542 -------SRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFD 590
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/395 (20%), Positives = 158/395 (40%), Gaps = 55/395 (13%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSI 107
K + + + N +I R G I A V M + +T+N+L+ +S
Sbjct: 54 KPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIG---------ISK 104
Query: 108 PYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYS 167
R++E HQ+ P+ +Y M+ + E+A M K A S++
Sbjct: 105 DPSRMMEA-HQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKD----AASWN 159
Query: 168 RIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR 227
+I+ + + EM KA E+ M++K ++ +I L +A F+ +R
Sbjct: 160 TMITGYARRGEMEKARELFYSMMEKNEV----SWNAMISGYIECGDLEKASHFFKVAPVR 215
Query: 228 GMSPGGRTYDTLVEAY--CLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHG 285
G+ + ++ Y K E ++ +D + K +LVT+NA+I G
Sbjct: 216 GVV----AWTAMITGYMKAKKVELAEAM-FKDMTVNK------------NLVTWNAMISG 258
Query: 286 LCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWP 345
RP++ L++ R M E + P+ S+ + G + L+ ++ + + C
Sbjct: 259 YVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLC-- 316
Query: 346 LDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLLNGLHK 405
++ +SL++ YC + A KL ++ D V++ +++G +
Sbjct: 317 -------------NDVTALTSLISMYCKCGELGDAWKL-FEVMKKKDVVAWNAMISGYAQ 362
Query: 406 KATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKC 440
+ K L LF + P +I + ++ C
Sbjct: 363 HGNAD--KALCLFREMIDNKIRPDWITFVAVLLAC 395
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 123/288 (42%), Gaps = 33/288 (11%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
VS+N+VIK G++ A T+ ++M + + +++ T+IS +A+ N ++L
Sbjct: 182 VSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK-------EALQL 234
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
+H+M ++ P+ + + +E+ I + + + + +I + K
Sbjct: 235 FHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
EM +ALE+ + K V A+ LI + EA F EM G+ P T
Sbjct: 295 CGEMEEALEVFKNIKKKS----VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT 350
Query: 236 YDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVT----SFSPSLVTYNALIHGLCFFQR 291
+ ++ A G ++++G L +Y + P++ Y ++ L
Sbjct: 351 FTAVLTACSYTG-----------LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGL 399
Query: 292 PDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQ 339
DEA ++ MP L P+ V + A++ R + K EL E+ +
Sbjct: 400 LDEAKRFIQEMP---LKPNAVIWGALLKACR----IHKNIELGEEIGE 440
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 135/302 (44%), Gaps = 53/302 (17%)
Query: 20 RGFAAGKAT-----TEKGLVSPPNVL--IPGFAAGKATTEKCLVSFNAVIKRLCGEGRIR 72
RGF+ +A +E GLV ++L IP + + +V + +++ + G +
Sbjct: 40 RGFSNEEALILRRLSEGGLVHARHLLDKIP-----QRGSINRVVYWTSLLSKYAKTGYLD 94
Query: 73 EAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQMCV-RELSPNETTY 131
EA + + M + + VT N +++ YV+ + + RE+ N ++
Sbjct: 95 EARVLFEVMPERNIVTCNAMLTG-------------YVKCRRMNEAWTLFREMPKNVVSW 141
Query: 132 RCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLD 191
M+ CD R E+AV + M E+ + S++ +++ +N +M KA ++ M
Sbjct: 142 TVMLTALCDDGRSEDAVELFDEMPERNVV----SWNTLVTGLIRNGDMEKAKQVFDAMPS 197
Query: 192 KGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSK 251
+ DV ++ +I+ + EA+ LF +M + + T+ ++V YC G+ +
Sbjct: 198 R----DVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV----TWTSMVYGYCRYGDVRE 249
Query: 252 VFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDE 311
+ L E+ ++ ++V++ A+I G + + EAL + EM D D
Sbjct: 250 AYRLFCEMPER------------NIVSWTAMISGFAWNELYREALMLFL---EMKKDVDA 294
Query: 312 VS 313
VS
Sbjct: 295 VS 296
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 121/289 (41%), Gaps = 41/289 (14%)
Query: 138 FCDRNRVEEAVGILRLMAEKGLSPHA---DSYSRIISRFCKNKEMGKALEMKVEMLDKGI 194
FC + E ++ R + E P +S +R SRF E+ + VE+L+ GI
Sbjct: 69 FCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEV---FSLFVEILEDGI 125
Query: 195 FPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFH 254
PD + + L++ + L E R L + G+ TL+ Y +
Sbjct: 126 LPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARC 185
Query: 255 LQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSY 314
+ D +++ P +V YNA+I G RP+EAL + R M L P+E++
Sbjct: 186 VFDRIVE------------PCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITL 233
Query: 315 SAVISG---------------FRRIRELRKAFELKLEM-DQKETCWPLDQDTNESLVKDL 358
+V+S + + K ++ + D C LD S+ + +
Sbjct: 234 LSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV--SIFEKM 291
Query: 359 SNHDT--FSSLVNDYCAEDKAEMALKL--RYQAQYL-PDSVSYCLLLNG 402
DT +S+++ Y KAE ++ + R +++ + PD +++ LLN
Sbjct: 292 RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNA 340
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 89/196 (45%), Gaps = 6/196 (3%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVEL 115
S+ ++ LCG + A +++ M + V ++ + +A + + + + +
Sbjct: 394 TSYENLVSYLCGSNEVVTALDIVENMCEAGLVISANILHSLLQAIEQI---LEFNLVQRI 450
Query: 116 YHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK 175
Y M + + PN T+R I L E A +L + L+P++ Y+ I++ + +
Sbjct: 451 YSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFR 510
Query: 176 NKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRT 235
K++ AL++ EM + + PD + LI + + + ++EM G+
Sbjct: 511 EKKVNSALKVLKEMKEADVKPDSVTFSYLINYCGEEATIAK---YYKEMKQAGVEVNKHV 567
Query: 236 YDTLVEAYCLKGEFSK 251
Y +LV+AY G+F K
Sbjct: 568 YMSLVKAYASCGQFEK 583
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 107/258 (41%), Gaps = 31/258 (12%)
Query: 69 GRIREAETVLQEMTDPDCVTYNTLISA-ACEAEKNHNLSIPYVRIVELYHQMCVRELSPN 127
G + A V ++ + D V +N +IS A ++ + L+ L M + + P+
Sbjct: 166 GEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALN--------LVKDMKLLGIKPD 217
Query: 128 ETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKEMGKALEMKV 187
T+ +I F E+ IL LM G P S++ IIS N + KA +
Sbjct: 218 VITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFK 277
Query: 188 EMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYDTLVEAYCLKG 247
+ML G++P+ L+ + +++ ++ G+ G L++ Y G
Sbjct: 278 QMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCG 337
Query: 248 EFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALI-----HGLCFFQRPDEALEILRGM 302
S+ L + +K + VT+N++I HGL D+A+E+ M
Sbjct: 338 FISEAMILFRKTPKK------------TTVTFNSMIFCYANHGLA-----DKAVELFDQM 380
Query: 303 PEMLLDPDEVSYSAVISG 320
D ++++A+++
Sbjct: 381 EATGEKLDHLTFTAILTA 398
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 114/278 (41%), Gaps = 51/278 (18%)
Query: 56 VSFNAVIKRLCGEGRIREAETVLQEMT------DPDCVTYNTLISAACEAEKNHNLSIPY 109
+S+ + I+ L R EA+ + E+ YN L+S E +
Sbjct: 17 LSYVSFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALVSRYLRKEVSW------ 70
Query: 110 VRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRI 169
R+V ++M R+ N Y +IR++ D ++A+GI+ + E GL + Y+ +
Sbjct: 71 -RVV---NEMKKRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEIREIGLPMDVEIYNSV 126
Query: 170 ISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGM 229
I F K E+ + L+ G F D+ G L+ L Q G+
Sbjct: 127 IDTFGKYGELDEELQF-------GSFEDI---GELVGKLKSQ----------------GV 160
Query: 230 SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFF 289
+P + TL AY +G + + + +G P+L+ N LI+
Sbjct: 161 APSANLFCTLANAYAQQGLCKQTVKVLKMMENEG--------IEPNLIMLNVLINAFGTA 212
Query: 290 QRPDEALEILRGMPE-MLLDPDEVSYSAVISGFRRIRE 326
+ EAL I + E + + PD V+YS ++ F R ++
Sbjct: 213 GKHMEALSIYHHIKETVWIHPDVVTYSTLMKAFTRAKK 250
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 173/428 (40%), Gaps = 55/428 (12%)
Query: 114 ELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILR-LMAEKGLSPHADSYSRIISR 172
+L Q P T +I R E++ + + + + P+ SY++II+
Sbjct: 166 KLARQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINA 225
Query: 173 FCKNKEMGKALEMKVEMLDKGIF-PDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSP 231
C + +ALE+ +L F P Y L + L R+ +A L +EML +G +
Sbjct: 226 HCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAA 285
Query: 232 GGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLC---F 288
Y+ L+ Y G+F K DE+ K Y+ +++ +
Sbjct: 286 DSTVYNNLIRGYLDLGDFDKAVEFFDELKSK-------------CTVYDGIVNATFMEYW 332
Query: 289 FQRPD--EALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEM---DQKETC 343
F++ + EA+E R + + + + ++ F + + +A+ L EM
Sbjct: 333 FEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNI 392
Query: 344 WPLDQDTNESLVKDLSNHDTFSSLVNDYCAEDKAEMALKLRYQAQYLPDSVSYCLLL--- 400
++ DT +V + FS +N + ++ K+ + ++ D + YC ++
Sbjct: 393 LSVNSDTVGIMVNECFKMGEFSEAINTF-----KKVGSKVTSKP-FVMDYLGYCNIVTRF 446
Query: 401 --NGLHKKATSRFAK---RLLLFYIVAHCLTIPSYI--------------IYDILIEKCA 441
G+ +A FA+ R L +H I +Y+ + D+ + A
Sbjct: 447 CEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVA 506
Query: 442 NNEFKSVVELVKGFRMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYD 501
+ + EL+K G + E+A M R +P+ ++Y++++ C G + +A D
Sbjct: 507 DFGARVFGELIK----NGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKD 562
Query: 502 MYKEMLHY 509
+ EM+ +
Sbjct: 563 IVGEMIRH 570
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 125/301 (41%), Gaps = 44/301 (14%)
Query: 48 KATTEKCLVSFNAVIKRLCGEGRIREAETVLQEMTD------PDCVTYNTLISAACEAEK 101
K+ EK +V++ ++I LC G+ +EA V +M D PD T ++ AC +
Sbjct: 432 KSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS-DIMTSVTNACAGLE 490
Query: 102 NHNLSIPYVRIVELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSP 161
+ +++ M L N +I L+ E A+ + M+ + +
Sbjct: 491 ALRFGL------QVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMV- 543
Query: 162 HADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLF 221
+++ +IS + +N ++++ ML +GIFPD + ++ + LL+ + L
Sbjct: 544 ---AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLH 600
Query: 222 QEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFS----PSLV 277
L G+ + L++ Y ++ GF Y F SL+
Sbjct: 601 GYTLRLGIPSDTHLKNALIDMY----------------VKCGFSKYAENIFKKMQHKSLI 644
Query: 278 TYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVI-----SGFRRIRELRKAFE 332
T+N +I+G AL + M + PD+V++ ++I SGF + E + FE
Sbjct: 645 TWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGF--VEEGKNIFE 702
Query: 333 L 333
Sbjct: 703 F 703
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 30/258 (11%)
Query: 13 TLKTFRI-RGFAAGKATTEKGLVSPPNVLIPGFAAG------------KATTEKCLVSFN 59
++ +F I RGF G VS N L+ +A G +K VS+N
Sbjct: 204 SIHSFVIKRGFDRG--------VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 60 AVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQM 119
+++ G EA V + + VT+N + + +H+ ++ RI + H
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGAL---RIGKCIHDQ 312
Query: 120 CVR-ELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCKNKE 178
+R L + +I ++C RVE A M K + S++ +I+ + +
Sbjct: 313 VIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVR----SWTAMIAGYGMHGH 368
Query: 179 MGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLR-GMSPGGRTYD 237
KALE+ M+D G+ P+ + ++ H +E F M R G+ PG Y
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG 428
Query: 238 TLVEAYCLKGEFSKVFHL 255
+V+ G K + L
Sbjct: 429 CMVDLLGRAGFLQKAYDL 446
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 189/470 (40%), Gaps = 65/470 (13%)
Query: 59 NAVIKRLCGEGRIREAETVLQEMTDPDCVTYNTLISAACEAEKNHNLSIPYVRIVELYHQ 118
N+++ C + +A+ + +M D V++NT+IS N+S I++L ++
Sbjct: 183 NSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG---NMS----EILKLLYR 235
Query: 119 MCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISRFCK-NK 177
M L P++ T+ + + +E + + + G + +I+ + K K
Sbjct: 236 MRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGK 295
Query: 178 EMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPGGRTYD 237
E E +L+ DV + ++I L R +A +F EML G
Sbjct: 296 E-----EASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIA 350
Query: 238 TLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALE 297
++V + G F + V++ G+ T +P+L N+LI D++L
Sbjct: 351 SVVASCAQLGSFDLGASVHGYVLRHGY-----TLDTPAL---NSLITMYAKCGHLDKSLV 402
Query: 298 ILRGMPEMLLDPDEVSYSAVISGFRRIRELRKAFELKLEMDQKETCWPLDQDTNESLVKD 357
I M E D VS++A+ISG+ + +L KA L EM K T +D T SL++
Sbjct: 403 IFERMNE----RDLVSWNAIISGYAQNVDLCKALLLFEEMKFK-TVQQVDSFTVVSLLQA 457
Query: 358 LSNHDTF----------------------SSLVNDYCAEDKAEMALKLRYQAQYLPDSVS 395
S+ ++LV+ Y E A + + + D VS
Sbjct: 458 CSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRC-FDSISWKDVVS 516
Query: 396 YCLLLNGLHKKATSRFAKRLLLFYIVAHCLTIPSYIIYDILIEKCANNEFKSVVELVKGF 455
+ +L+ G A L ++ H P+++I+ ++ C++N G
Sbjct: 517 WGILIAGYGFHGKGDIA--LEIYSEFLHSGMEPNHVIFLAVLSSCSHN----------GM 564
Query: 456 RMRGLVNEAARARDTMLHRNYRPEGAVYNLLIFDHCIGGNVHKAYDMYKE 505
+GL ++ RD + N+ V +LL C + A+ YKE
Sbjct: 565 VQQGLKIFSSMVRDFGVEPNHEHLACVVDLL----CRAKRIEDAFKFYKE 610
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 150 ILRLM-AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 208
+ R M ++ P YS++IS K + A+ + EM + G PD Y LI
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 209 CHQRRLLEARDLFQEML--LRGM---SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
H R +A + + L ++G+ P TY+ L+ A+ G+ +V L
Sbjct: 179 LHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNAL-------- 230
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
F ++ SP + T+N ++ E +L M PD ++++ +I + +
Sbjct: 231 FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLV--KDLSNHDTFSSLVNDYCAE---DKAE 378
+E K M+Q T +SL+ K+ TF+S++ +Y DKAE
Sbjct: 291 KQEFEK-------MEQ----------TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Query: 379 MALKLRYQAQYLPDSVSY-CLLL 400
K Y+P ++Y C+++
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIM 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 106 SIPYVRIVELYHQMC-VRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
S +++ +E++ M R P+ Y +I + + + A+ + M G P A
Sbjct: 110 SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDAS 169
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLD--KGI---FPDVHAYGLLIQLLCHQRRLLEARD 219
Y+ +I+ ++ KALE LD KGI P+V Y +L++ ++ +
Sbjct: 170 VYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNA 229
Query: 220 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 279
LF+++ + +SP T++ +++AY G ++ + V+ + P ++T+
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM----EAVLTR----MRSNECKPDIITF 281
Query: 280 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 330
N LI Q ++ + + + P +++++I + + R + KA
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 111/263 (42%), Gaps = 37/263 (14%)
Query: 150 ILRLM-AEKGLSPHADSYSRIISRFCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLL 208
+ R M ++ P YS++IS K + A+ + EM + G PD Y LI
Sbjct: 119 VFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAH 178
Query: 209 CHQRRLLEARDLFQEML--LRGM---SPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
H R +A + + L ++G+ P TY+ L+ A+ G+ +V L
Sbjct: 179 LHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNAL-------- 230
Query: 264 FLPYYVTSFSPSLVTYNALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRR 323
F ++ SP + T+N ++ E +L M PD ++++ +I + +
Sbjct: 231 FKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGK 290
Query: 324 IRELRKAFELKLEMDQKETCWPLDQDTNESLV--KDLSNHDTFSSLVNDYCAE---DKAE 378
+E K M+Q T +SL+ K+ TF+S++ +Y DKAE
Sbjct: 291 KQEFEK-------MEQ----------TFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAE 333
Query: 379 MALKLRYQAQYLPDSVSY-CLLL 400
K Y+P ++Y C+++
Sbjct: 334 WVFKKMNDMNYIPSFITYECMIM 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 106 SIPYVRIVELYHQMC-VRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHAD 164
S +++ +E++ M R P+ Y +I + + + A+ + M G P A
Sbjct: 110 SDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDAS 169
Query: 165 SYSRIISRFCKNKEMGKALEMKVEMLD--KGI---FPDVHAYGLLIQLLCHQRRLLEARD 219
Y+ +I+ ++ KALE LD KGI P+V Y +L++ ++ +
Sbjct: 170 VYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNA 229
Query: 220 LFQEMLLRGMSPGGRTYDTLVEAYCLKGEFSKVFHLQDEVIQKGFLPYYVTSFSPSLVTY 279
LF+++ + +SP T++ +++AY G ++ + V+ + P ++T+
Sbjct: 230 LFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEM----EAVLTR----MRSNECKPDIITF 281
Query: 280 NALIHGLCFFQRPDEALEILRGMPEMLLDPDEVSYSAVISGFRRIRELRKA 330
N LI Q ++ + + + P +++++I + + R + KA
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 11/211 (5%)
Query: 58 FNAVIKRLCGEGRIREAETVLQEMTD--PDCVT---YNTLISAACEAEKNHNLSIPYVRI 112
F AVI+ L R+ E V + P ++ Y +I CE EK+ + +I R
Sbjct: 98 FWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISENNYERIIRFLCE-EKSMSEAIRAFRS 156
Query: 113 VELYHQMCVRELSPNETTYRCMIRLFCDRNRVEEAVGILRLMAEKGLSPHADSYSRIISR 172
+ H ELSP+ Y +I + D + EEA+ L M E GL P ++Y +I
Sbjct: 157 MIDDH-----ELSPSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEA 211
Query: 173 FCKNKEMGKALEMKVEMLDKGIFPDVHAYGLLIQLLCHQRRLLEARDLFQEMLLRGMSPG 232
+ K K + + M G D Y LLI+ L ++Q ++ R M+
Sbjct: 212 YGKWKMYDEIVLCLKRMESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLE 271
Query: 233 GRTYDTLVEAYCLKGEFSKVFHLQDEVIQKG 263
T +++EAY G K+ +++I+ G
Sbjct: 272 PSTLLSMLEAYAEFGLIEKMEETCNKIIRFG 302