Miyakogusa Predicted Gene

Lj0g3v0010119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0010119.1 Non Chatacterized Hit- tr|I1N861|I1N861_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,65.22,0.000001,
,gene.g903.t1.1
         (155 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30900.2 | Symbols:  | DNAse I-like superfamily protein | chr...   265   1e-71
AT4G30900.1 | Symbols:  | DNAse I-like superfamily protein | chr...   265   1e-71

>AT4G30900.2 | Symbols:  | DNAse I-like superfamily protein |
           chr4:15040021-15042203 FORWARD LENGTH=316
          Length = 316

 Score =  265 bits (676), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 125/161 (77%), Positives = 139/161 (86%), Gaps = 6/161 (3%)

Query: 1   MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 60
           +DE SPRARRRSALLTWQHIASLPP+LPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM
Sbjct: 144 LDEISPRARRRSALLTWQHIASLPPTLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 203

Query: 61  RDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIFRALCLCWDRQTQDLHIDWIFFRG 120
           RDAWPS+RVRKNV+LIRTYH FKG+KQGT+E+LKLIFRALCLCWDRQTQDLH DWI +RG
Sbjct: 204 RDAWPSARVRKNVALIRTYHDFKGDKQGTVEFLKLIFRALCLCWDRQTQDLHTDWILYRG 263

Query: 121 RSLIPVSCEVVNDNIDGT--PKHKTIIPHFMHP----MIKP 155
           RS++PV CE+VND ID      H  +   FM P    M++P
Sbjct: 264 RSIVPVMCEIVNDKIDDLYPSSHYPVFAEFMLPRSVRMLEP 304


>AT4G30900.1 | Symbols:  | DNAse I-like superfamily protein |
           chr4:15040021-15042203 FORWARD LENGTH=316
          Length = 316

 Score =  265 bits (676), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 125/161 (77%), Positives = 139/161 (86%), Gaps = 6/161 (3%)

Query: 1   MDEFSPRARRRSALLTWQHIASLPPSLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 60
           +DE SPRARRRSALLTWQHIASLPP+LPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM
Sbjct: 144 LDEISPRARRRSALLTWQHIASLPPTLPVVYCGGFNTQKESTTGRFLLGRSREHGVVGDM 203

Query: 61  RDAWPSSRVRKNVSLIRTYHGFKGEKQGTLEYLKLIFRALCLCWDRQTQDLHIDWIFFRG 120
           RDAWPS+RVRKNV+LIRTYH FKG+KQGT+E+LKLIFRALCLCWDRQTQDLH DWI +RG
Sbjct: 204 RDAWPSARVRKNVALIRTYHDFKGDKQGTVEFLKLIFRALCLCWDRQTQDLHTDWILYRG 263

Query: 121 RSLIPVSCEVVNDNIDGT--PKHKTIIPHFMHP----MIKP 155
           RS++PV CE+VND ID      H  +   FM P    M++P
Sbjct: 264 RSIVPVMCEIVNDKIDDLYPSSHYPVFAEFMLPRSVRMLEP 304