Miyakogusa Predicted Gene

Lj0g3v0009329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0009329.1 Non Chatacterized Hit- tr|B9RHA6|B9RHA6_RICCO
Vacuolar proton atpase, putative OS=Ricinus communis
G,55.71,0.000000000000002,V_ATPase_I,ATPase, V0/A0 complex subunit a;
coiled-coil,NULL; VACUOLAR PROTON ATPASE,NULL; VACUOLAR
,gene.g823.t1.1
         (422 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28520.1 | Symbols: VHA-A1 | vacuolar proton ATPase A1 | chr2...   282   4e-76
AT4G39080.1 | Symbols: VHA-A3 | vacuolar proton ATPase A3 | chr4...   190   1e-48
AT2G21410.1 | Symbols: VHA-A2 | vacuolar proton ATPase A2 | chr2...   167   2e-41

>AT2G28520.1 | Symbols: VHA-A1 | vacuolar proton ATPase A1 |
           chr2:12210026-12215532 FORWARD LENGTH=817
          Length = 817

 Score =  282 bits (721), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 135/178 (75%), Positives = 157/178 (88%)

Query: 1   MDQFIDNLPPMDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTF 60
           M++F+D LP MDLMRSEKMT VQLIIP ESAHR+I+YLGELGLLQFRDLNA+KSPFQRTF
Sbjct: 1   MEEFLDKLPQMDLMRSEKMTLVQLIIPVESAHRSITYLGELGLLQFRDLNADKSPFQRTF 60

Query: 61  VNQVKRCAEMSRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSN 120
            NQVKRC EMSRKLRFFKDQI+KAGL  S R+ ++ DI L DLE QLA+HEHE++EMNSN
Sbjct: 61  ANQVKRCGEMSRKLRFFKDQIDKAGLRCSPRLEIEPDIALGDLERQLADHEHEVLEMNSN 120

Query: 121 SDKLRQSYNELLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
           S+KLRQ+YNELLEFKIVL+KA GFLVSSN HA+ +E EL E+ YSN+ ++ETASLLEQ
Sbjct: 121 SEKLRQTYNELLEFKIVLEKASGFLVSSNTHAIGEEIELHESTYSNNGFIETASLLEQ 178


>AT4G39080.1 | Symbols: VHA-A3 | vacuolar proton ATPase A3 |
           chr4:18209513-18214752 FORWARD LENGTH=821
          Length = 821

 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 93/168 (55%), Positives = 130/168 (77%), Gaps = 1/168 (0%)

Query: 11  MDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEM 70
           MDLMRSE M  VQLI+P ESAH  +SYLG+LGL+QF+DLN+EKSPFQRT+  Q+KRC EM
Sbjct: 14  MDLMRSETMQLVQLIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEM 73

Query: 71  SRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSNSDKLRQSYNE 130
           +RK+RFF+DQ++KAG+ +      + DIDL+D+EV+L E E EL+E+N+N+DKL++SYNE
Sbjct: 74  ARKIRFFRDQMSKAGVPAKEMQGKENDIDLDDVEVKLGELEAELVEINANNDKLQRSYNE 133

Query: 131 LLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQ 178
           L+E+K+VLQKA  F  S++  A   +RE  E+  + +D +E+  L E+
Sbjct: 134 LMEYKLVLQKAGEFFSSAHRSAADQQRE-TESQQAGEDLLESPLLQEE 180



 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 48/67 (71%)

Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
           E+A++KILKICEAFGAN YP  ED+ +Q Q+  EVS RL++L+ T+DAG+  RN  L +I
Sbjct: 250 ERAKSKILKICEAFGANRYPFSEDLGRQAQMITEVSGRLSELKTTIDAGLGQRNILLQTI 309

Query: 237 TDHLANW 243
            D    W
Sbjct: 310 GDKFELW 316


>AT2G21410.1 | Symbols: VHA-A2 | vacuolar proton ATPase A2 |
           chr2:9162703-9168141 FORWARD LENGTH=821
          Length = 821

 Score =  167 bits (422), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/171 (53%), Positives = 132/171 (77%), Gaps = 2/171 (1%)

Query: 11  MDLMRSEKMTFVQLIIPAESAHRAISYLGELGLLQFRDLNAEKSPFQRTFVNQVKRCAEM 70
           MDLMRSE M  VQ+I+P ESAH  +SYLG+LGL+QF+DLN+EKSPFQRT+  Q+KRC EM
Sbjct: 15  MDLMRSEPMQLVQVIVPMESAHLTVSYLGDLGLVQFKDLNSEKSPFQRTYAAQIKRCGEM 74

Query: 71  SRKLRFFKDQINKAGLISSTRIVLQRDIDLEDLEVQLAEHEHELIEMNSNSDKLRQSYNE 130
           +RK+RFFK+Q++KAG+     +  + DIDL+D+EV+L E E EL+E+N+N+DKL++SYNE
Sbjct: 75  ARKIRFFKEQMSKAGVTPKETLDRENDIDLDDVEVKLEELEAELVEINANNDKLQRSYNE 134

Query: 131 LLEFKIVLQKACGFLVSSNGHAVSDERELQENIYSNDDYVETASLLEQART 181
           L+E+K+VL+KA  F  S++  A + + E+ E     +D +E A LL++ ++
Sbjct: 135 LVEYKLVLEKAGEFFASAHRSATAQQSEI-ETEQVGEDLLE-APLLQEEKS 183



 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 47/67 (70%)

Query: 177 EQARTKILKICEAFGANCYPVPEDISKQRQITREVSSRLTDLEATLDAGIRHRNKALASI 236
           E+A++KILKICEAFGAN YP  ED+ KQ Q+  EVS RL++L+ T+ AG+  RN  L +I
Sbjct: 251 ERAKSKILKICEAFGANRYPFSEDLGKQAQMMTEVSGRLSELKTTIGAGLDQRNILLETI 310

Query: 237 TDHLANW 243
            D    W
Sbjct: 311 GDKFEQW 317