Miyakogusa Predicted Gene

Lj0g3v0008759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0008759.1 Non Chatacterized Hit- tr|F8JGS4|F8JGS4_HYPSM
Putative uncharacterized protein OS=Hyphomicrobium
sp.,31.21,0.000000002,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; no description,NULL; seg,NULL,CUFF.508.1
         (305 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05100.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   398   e-111

>AT3G05100.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr3:1424155-1425667 FORWARD LENGTH=336
          Length = 336

 Score =  398 bits (1023), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 181/231 (78%), Positives = 210/231 (90%)

Query: 75  KEDVEWVKGQIQANGLHMQDNVLRKGINPRTRAQQLEDLRQFKGISHYEGPESDNHTALP 134
           ++D+EWV+  I++NGLHMQ N LRKGINPRTR QQL DL Q+KGISHYEG E++NHTALP
Sbjct: 79  QDDIEWVRDLIRSNGLHMQKNELRKGINPRTRDQQLADLIQYKGISHYEGDEANNHTALP 138

Query: 135 CPGELLVEQHHSNYGEPWAGGRDVFEFLAQAVQLRPDSLVLEIGCGTLRVGLHFIRYLNS 194
           CPGELLVEQHHSNYGEPWAGGRDVFEFLA++  L+P+S VLEIGCGTLRVGLHFIRYL+ 
Sbjct: 139 CPGELLVEQHHSNYGEPWAGGRDVFEFLAESSSLKPNSRVLEIGCGTLRVGLHFIRYLSP 198

Query: 195 EHFNCLERDELSLMAVFRYELPAQGLLYKRPLIVKGDDMDFTKFGSDKMYDLIYASAVFL 254
           +HF+CLE+DELSLMA  RYELP+QGLL+KRPLIV+GDDM+F+KFGSD  YDLIYASAVFL
Sbjct: 199 QHFHCLEKDELSLMAALRYELPSQGLLHKRPLIVRGDDMEFSKFGSDTAYDLIYASAVFL 258

Query: 255 HMPDKLVWAGLERLASKLKPYDGRIFVSHNIKFCSRLGGEECTKRLMSLGL 305
           HMPDKLVW GLERL  +LKPYDGRIFVSHN+KFCSRLG ++C+++L SLGL
Sbjct: 259 HMPDKLVWTGLERLVDRLKPYDGRIFVSHNVKFCSRLGQDKCSQKLASLGL 309