Miyakogusa Predicted Gene

Lj0g3v0006579.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0006579.1 tr|B9MXZ2|B9MXZ2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_594476 PE=4
SV=1,34.97,3e-18,SANTA,SANT associated; seg,NULL,CUFF.372.1
         (876 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02520.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: SANT assoc...   133   4e-31
AT1G58210.1 | Symbols: EMB1674 | kinase interacting family prote...    85   2e-16

>AT5G02520.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: SANT
           associated (InterPro:IPR015216); BEST Arabidopsis
           thaliana protein match is: kinase interacting family
           protein (TAIR:AT1G58210.1); Has 842 Blast hits to 736
           proteins in 154 species: Archae - 2; Bacteria - 99;
           Metazoa - 236; Fungi - 52; Plants - 90; Viruses - 0;
           Other Eukaryotes - 363 (source: NCBI BLink). |
           chr5:561325-563840 FORWARD LENGTH=598
          Length = 598

 Score =  133 bits (335), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 80/132 (60%), Gaps = 3/132 (2%)

Query: 23  SSFQRTVCLYDWWLIQAKNDFHGKRLAVAGVS-SKKDEAMRVFVSAPIIKRYDVFSLETA 81
           SSFQ+TV L DWWLI+   +F GK+  VAG   S +  AMRVF S+PI K  DVF+L  +
Sbjct: 13  SSFQKTVVLRDWWLIKCPKEFEGKQFGVAGFEESVETRAMRVFTSSPITKALDVFTLLAS 72

Query: 82  DGVYVIISGFINQERTRENGFAPEVFNSFIFGFPPNWESYAVDCFREESTAASDSGNAAP 141
           DG+Y+ + GF+N+ER  +NGF PE+   FIFGFPP WE     CF  +S       N  P
Sbjct: 73  DGIYITLRGFLNKERVLKNGFNPEISREFIFGFPPCWERVCNSCFEGDSFGT--DVNTVP 130

Query: 142 DNVSAIRPEVLS 153
             +    P +LS
Sbjct: 131 STIEKACPPILS 142


>AT1G58210.1 | Symbols: EMB1674 | kinase interacting family protein
           | chr1:21553621-21558056 FORWARD LENGTH=1246
          Length = 1246

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 55/95 (57%), Gaps = 5/95 (5%)

Query: 27  RTVCLYDWWLIQAKNDFHGKRLAVAGVSSKKDEAMRVFVSAPIIKRYDVFSLETADGVYV 86
           ++V L DWWL +      GK L + G  S     +R+F S  I KR++  +LE  DG+ +
Sbjct: 64  KSVTLSDWWLTK-----KGKDLCIKGFESNGASGVRLFSSGTISKRHESTTLEAIDGITI 118

Query: 87  IISGFINQERTRENGFAPEVFNSFIFGFPPNWESY 121
            I+GFIN+ R  ENG + EV N F  GFP +WE Y
Sbjct: 119 SINGFINRSRCLENGISIEVCNRFRLGFPYDWEDY 153