Miyakogusa Predicted Gene

Lj0g3v0005839.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0005839.1 Non Chatacterized Hit- tr|I3T1Y4|I3T1Y4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,51.69,0.00000000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.330.1
         (139 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G41390.1 | Symbols:  | PLAC8 family protein | chr5:16565576-1...    75   2e-14
AT4G23470.3 | Symbols:  | PLAC8 family protein | chr4:12249289-1...    73   5e-14
AT1G63830.3 | Symbols:  | PLAC8 family protein | chr1:23685408-2...    73   5e-14
AT1G63830.1 | Symbols:  | PLAC8 family protein | chr1:23685408-2...    73   5e-14
AT1G63830.2 | Symbols:  | PLAC8 family protein | chr1:23685408-2...    73   5e-14
AT4G23470.1 | Symbols:  | PLAC8 family protein | chr4:12249289-1...    73   6e-14
AT5G41390.2 | Symbols:  | PLAC8 family protein | chr5:16566179-1...    59   1e-09
AT4G23470.2 | Symbols:  | PLAC8 family protein | chr4:12249867-1...    56   7e-09

>AT5G41390.1 | Symbols:  | PLAC8 family protein |
          chr5:16565576-16567253 FORWARD LENGTH=264
          Length = 264

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query: 27 CASYLLPKRALYN-MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          C SYLL KRALYN MSRYTCC GYMPCS +CGESKCP+FC  TE
Sbjct: 45 CVSYLLRKRALYNDMSRYTCCGGYMPCSGKCGESKCPQFCLATE 88


>AT4G23470.3 | Symbols:  | PLAC8 family protein |
          chr4:12249289-12251079 FORWARD LENGTH=233
          Length = 233

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 1/46 (2%)

Query: 25 AQCASYLLPKRALYN-MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          A CASYLL KRALY+ MSRY CCAGYMPCS RCGE+KCP+ C  TE
Sbjct: 41 APCASYLLRKRALYDDMSRYVCCAGYMPCSGRCGEAKCPQLCLATE 86


>AT1G63830.3 | Symbols:  | PLAC8 family protein |
          chr1:23685408-23687098 FORWARD LENGTH=232
          Length = 232

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query: 27 CASYLLPKRALYN-MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          C SY+L +RALYN MSRYTCCAGYMPCS RCGESKCP+ C  TE
Sbjct: 45 CVSYMLRRRALYNDMSRYTCCAGYMPCSGRCGESKCPQLCLATE 88


>AT1G63830.1 | Symbols:  | PLAC8 family protein |
          chr1:23685408-23687098 FORWARD LENGTH=232
          Length = 232

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query: 27 CASYLLPKRALYN-MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          C SY+L +RALYN MSRYTCCAGYMPCS RCGESKCP+ C  TE
Sbjct: 45 CVSYMLRRRALYNDMSRYTCCAGYMPCSGRCGESKCPQLCLATE 88


>AT1G63830.2 | Symbols:  | PLAC8 family protein |
          chr1:23685408-23687098 FORWARD LENGTH=232
          Length = 232

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 34/44 (77%), Positives = 37/44 (84%), Gaps = 1/44 (2%)

Query: 27 CASYLLPKRALYN-MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          C SY+L +RALYN MSRYTCCAGYMPCS RCGESKCP+ C  TE
Sbjct: 45 CVSYMLRRRALYNDMSRYTCCAGYMPCSGRCGESKCPQLCLATE 88


>AT4G23470.1 | Symbols:  | PLAC8 family protein |
          chr4:12249289-12251079 FORWARD LENGTH=255
          Length = 255

 Score = 73.2 bits (178), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 1/46 (2%)

Query: 25 AQCASYLLPKRALYN-MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          A CASYLL KRALY+ MSRY CCAGYMPCS RCGE+KCP+ C  TE
Sbjct: 41 APCASYLLRKRALYDDMSRYVCCAGYMPCSGRCGEAKCPQLCLATE 86


>AT5G41390.2 | Symbols:  | PLAC8 family protein |
          chr5:16566179-16567253 FORWARD LENGTH=206
          Length = 206

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 24/30 (80%), Positives = 26/30 (86%)

Query: 40 MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          MSRYTCC GYMPCS +CGESKCP+FC  TE
Sbjct: 1  MSRYTCCGGYMPCSGKCGESKCPQFCLATE 30


>AT4G23470.2 | Symbols:  | PLAC8 family protein |
          chr4:12249867-12251079 FORWARD LENGTH=199
          Length = 199

 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 25/30 (83%)

Query: 40 MSRYTCCAGYMPCSKRCGESKCPEFCFCTE 69
          MSRY CCAGYMPCS RCGE+KCP+ C  TE
Sbjct: 1  MSRYVCCAGYMPCSGRCGEAKCPQLCLATE 30