Miyakogusa Predicted Gene

Lj0g3v0004569.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004569.1 tr|B9HX83|B9HX83_POPTR DNA methyltransferase
(Fragment) OS=Populus trichocarpa GN=DMT907 PE=4
SV=1,49.46,2e-18,S-adenosyl-L-methionine-dependent
methyltransferases,NULL; no description,NULL; DNA_methylase,C-5
cy,NODE_53601_length_1615_cov_217.188858.path1.1
         (105 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14620.1 | Symbols: DRM2, DMT7 | domains rearranged methyltra...   151   1e-37
AT5G15380.1 | Symbols: DRM1 | domains rearranged methylase 1 | c...   147   1e-36
AT3G17310.1 | Symbols: DRM3, AtDRM3 | S-adenosyl-L-methionine-de...   112   5e-26
AT3G17310.2 | Symbols: DRM3, AtDRM3 | S-adenosyl-L-methionine-de...   112   5e-26

>AT5G14620.1 | Symbols: DRM2, DMT7 | domains rearranged
           methyltransferase 2 | chr5:4715429-4718578 REVERSE
           LENGTH=626
          Length = 626

 Score =  151 bits (381), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 72/105 (68%), Positives = 84/105 (80%)

Query: 1   MYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 60
           ++P G+NVLSLF+GIGG EVALHRL I +K VVSVE S+VNRNI++ +WEQTNQ G LI+
Sbjct: 497 IFPHGINVLSLFTGIGGGEVALHRLQIKMKLVVSVEISKVNRNILKDFWEQTNQTGELIE 556

Query: 61  LDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNRVSRDGL 105
             D+Q L  D +E LM   GGFDLVIGGSPCNNLAG NRVSR GL
Sbjct: 557 FSDIQHLTNDTIEGLMEKYGGFDLVIGGSPCNNLAGGNRVSRVGL 601


>AT5G15380.1 | Symbols: DRM1 | domains rearranged methylase 1 |
           chr5:4991347-4994826 FORWARD LENGTH=624
          Length = 624

 Score =  147 bits (371), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 71/105 (67%), Positives = 83/105 (79%)

Query: 1   MYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 60
           ++P G+NVLSLF+GIGG EVALHRL I +  VVSVE S+ NRNI+RS+WEQTNQKG L +
Sbjct: 493 LFPNGINVLSLFTGIGGGEVALHRLQIKMNVVVSVEISDANRNILRSFWEQTNQKGILRE 552

Query: 61  LDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNRVSRDGL 105
             DVQ LD + +E+LM   GGFDLVIGGSPCNNLAG NR  R GL
Sbjct: 553 FKDVQKLDDNTIERLMDEYGGFDLVIGGSPCNNLAGGNRHHRVGL 597


>AT3G17310.1 | Symbols: DRM3, AtDRM3 |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr3:5909294-5912838 REVERSE
           LENGTH=710
          Length = 710

 Score =  112 bits (280), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/101 (52%), Positives = 71/101 (70%)

Query: 1   MYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 60
           M+P+G+ VLSLFSGIGGAE+AL RLGI LK VVSVE   ++RNI++ WW+ + Q G L+ 
Sbjct: 584 MFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCGLSRNILKRWWQTSGQTGELVQ 643

Query: 61  LDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNRVS 101
           +++++ L A RLE LM   GGFD VI  +P   L  S  +S
Sbjct: 644 IEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLDLSKEIS 684


>AT3G17310.2 | Symbols: DRM3, AtDRM3 |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr3:5909294-5912838 REVERSE
           LENGTH=710
          Length = 710

 Score =  112 bits (280), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/101 (52%), Positives = 71/101 (70%)

Query: 1   MYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLID 60
           M+P+G+ VLSLFSGIGGAE+AL RLGI LK VVSVE   ++RNI++ WW+ + Q G L+ 
Sbjct: 584 MFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCGLSRNILKRWWQTSGQTGELVQ 643

Query: 61  LDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNRVS 101
           +++++ L A RLE LM   GGFD VI  +P   L  S  +S
Sbjct: 644 IEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLDLSKEIS 684