Miyakogusa Predicted Gene
- Lj0g3v0004549.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0004549.1 tr|G0ZS34|G0ZS34_9ROSI Domain rearranged
methyltransferase 1 (Fragment) OS=Vitis amurensis
GN=DRM2a1,42.11,0.000000000000004,seg,NULL; SUBFAMILY NOT NAMED,NULL;
DNA (CYTOSINE-5-)-METHYLTRANSFERASE 3-RELATED,NULL;
S-adenosyl-L,NODE_19233_length_1612_cov_165.473938.path1.1
(500 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G14620.1 | Symbols: DRM2, DMT7 | domains rearranged methyltra... 543 e-154
AT5G15380.1 | Symbols: DRM1 | domains rearranged methylase 1 | c... 534 e-152
AT3G17310.1 | Symbols: DRM3, AtDRM3 | S-adenosyl-L-methionine-de... 273 3e-73
AT3G17310.2 | Symbols: DRM3, AtDRM3 | S-adenosyl-L-methionine-de... 273 3e-73
>AT5G14620.1 | Symbols: DRM2, DMT7 | domains rearranged
methyltransferase 2 | chr5:4715429-4718578 REVERSE
LENGTH=626
Length = 626
Score = 543 bits (1399), Expect = e-154, Method: Compositional matrix adjust.
Identities = 279/457 (61%), Positives = 333/457 (72%), Gaps = 25/457 (5%)
Query: 53 EYGGSSWDISDADT-----FSDDEEITKSVSGNNDTLVSLVKMGFKEEEALIAIERLGPN 107
E G W SD DT + D+E + + N + SLVKMGF E EA +A+ER G N
Sbjct: 162 EEDGIDWSSSDDDTNYTDMLNSDDEKDPNSNENGSKIRSLVKMGFSELEASLAVERCGEN 221
Query: 108 SSLEELVDFIGVAQIAK--AEDALLPPEDKPRYNELSKPKKQRFNDCEVRGRKKPKTENR 165
+ EL DF+ AQ+A+ +E E KPR+N KK+RF E +G +
Sbjct: 222 VDIAELTDFLCAAQMAREFSEFYTEHEEQKPRHN----IKKRRF---ESKGEPRSSV--- 271
Query: 166 ILNEDDDDVPLHLPNPMIGFGIPNESFLTTHRKLPGDALGPPYFYYENVAFAPKGVWQTI 225
DD P+ LPNPMIGFG+PNE L THR LP A GPP+FYYENVA PKGVW+TI
Sbjct: 272 ------DDEPIRLPNPMIGFGVPNEPGLITHRSLPELARGPPFFYYENVALTPKGVWETI 325
Query: 226 SRFLFDVEPEFVDSKYFCAAARKRGYIHNLPIENRFPVLPQPPRTIHDAFPLTRKWWPSW 285
SR LF++ PEFVDSKYFC AARKRGYIHNLPI NRF + P P TIHDAFPL+++WWP W
Sbjct: 326 SRHLFEIPPEFVDSKYFCVAARKRGYIHNLPINNRFQIQPPPKYTIHDAFPLSKRWWPEW 385
Query: 286 DPRTKLNCLQTCIASAKLTERIRKAVENYDGEPP--ESVQKYVLYQSRKWNLVWVGRNKV 343
D RTKLNC+ TC SA+LT RIR A+E Y+ EP + VQ+YV+ Q +KWNLVWVG+NK
Sbjct: 386 DKRTKLNCILTCTGSAQLTNRIRVALEPYNEEPEPPKHVQRYVIDQCKKWNLVWVGKNKA 445
Query: 344 APLEPDEIETLLGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPKGMNVL 403
APLEPDE+E++LGFP+NHTRGGG+SRT+R+KSLGNSFQVDTVAYHLSVLK ++P G+NVL
Sbjct: 446 APLEPDEMESILGFPKNHTRGGGMSRTERFKSLGNSFQVDTVAYHLSVLKPIFPHGINVL 505
Query: 404 SLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLDDVQLLDA 463
SLF+GIGG EVALHRL I +K VVSVE S+VNRNI++ +WEQTNQ G LI+ D+Q L
Sbjct: 506 SLFTGIGGGEVALHRLQIKMKLVVSVEISKVNRNILKDFWEQTNQTGELIEFSDIQHLTN 565
Query: 464 DRLEQLMSATGGFDLVIGGSPCNNLAGSNRVSRDGLE 500
D +E LM GGFDLVIGGSPCNNLAG NRVSR GLE
Sbjct: 566 DTIEGLMEKYGGFDLVIGGSPCNNLAGGNRVSRVGLE 602
>AT5G15380.1 | Symbols: DRM1 | domains rearranged methylase 1 |
chr5:4991347-4994826 FORWARD LENGTH=624
Length = 624
Score = 534 bits (1376), Expect = e-152, Method: Compositional matrix adjust.
Identities = 269/435 (61%), Positives = 323/435 (74%), Gaps = 18/435 (4%)
Query: 68 SDDEEITKSVSGNNDTLV-SLVKMGFKEEEALIAIERLGPNSSLEELVDFIGVAQIAKAE 126
SDDEE + S N D ++ +L+KMG+ E+A IAIER G ++S+EE+VDFI AQ+A+
Sbjct: 178 SDDEEDELNNSSNEDRILQALIKMGYLREDAAIAIERCGEDASMEEVVDFICAAQMARQF 237
Query: 127 DALLPPEDKPRYNELSKPKKQRFNDCEVRGRKKPKTENRILNEDDDDVPLHLPNPMIGFG 186
D + DK EL K+R E +KP T+ I LP MIGFG
Sbjct: 238 DEIYAEPDK---KELMNNNKKRRTYTETP--RKPNTDQLI----------SLPKEMIGFG 282
Query: 187 IPNESFLTTHRK--LPGDALGPPYFYYENVAFAPKGVWQTISRFLFDVEPEFVDSKYFCA 244
+PN L HR +P A GPP+FYYENVA PKGVW IS L+D+ PEFVDSK+FCA
Sbjct: 283 VPNHPGLMMHRPVPIPDIARGPPFFYYENVAMTPKGVWAKISSHLYDIVPEFVDSKHFCA 342
Query: 245 AARKRGYIHNLPIENRFPVLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTCIASAKLT 304
AARKRGYIHNLPI+NRF + P TI +AFPLT++WWPSWD RTKLNCL TCIAS++LT
Sbjct: 343 AARKRGYIHNLPIQNRFQIQPPQHNTIQEAFPLTKRWWPSWDGRTKLNCLLTCIASSRLT 402
Query: 305 ERIRKAVENYDGEPPESVQKYVLYQSRKWNLVWVGRNKVAPLEPDEIETLLGFPRNHTRG 364
E+IR+A+E YDGE P VQK+V+Y+ +KWNLVWVG+NK+APL+ DE+E LLGFPR+HTRG
Sbjct: 403 EKIREALERYDGETPLDVQKWVMYECKKWNLVWVGKNKLAPLDADEMEKLLGFPRDHTRG 462
Query: 365 GGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPKGMNVLSLFSGIGGAEVALHRLGIPLK 424
GGIS TDRYKSLGNSFQVDTVAYHLSVLK ++P G+NVLSLF+GIGG EVALHRL I +
Sbjct: 463 GGISTTDRYKSLGNSFQVDTVAYHLSVLKPLFPNGINVLSLFTGIGGGEVALHRLQIKMN 522
Query: 425 NVVSVEKSEVNRNIVRSWWEQTNQKGNLIDLDDVQLLDADRLEQLMSATGGFDLVIGGSP 484
VVSVE S+ NRNI+RS+WEQTNQKG L + DVQ LD + +E+LM GGFDLVIGGSP
Sbjct: 523 VVVSVEISDANRNILRSFWEQTNQKGILREFKDVQKLDDNTIERLMDEYGGFDLVIGGSP 582
Query: 485 CNNLAGSNRVSRDGL 499
CNNLAG NR R GL
Sbjct: 583 CNNLAGGNRHHRVGL 597
>AT3G17310.1 | Symbols: DRM3, AtDRM3 |
S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr3:5909294-5912838 REVERSE
LENGTH=710
Length = 710
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 232/482 (48%), Gaps = 69/482 (14%)
Query: 82 DTLVSLVKMGFKEEEALIAIERLGPNSSLEELVDFIGVAQI-AKAEDALLPPEDK----- 135
D + L++MGF +E +AIE++G + L + I + A+ D L E K
Sbjct: 204 DKTLRLLEMGFSNDEISMAIEKIGTKGQISVLAESIVTGEFPAECHDDLEDIEKKVSAAA 263
Query: 136 PRYNELSKPKKQRF------------------------------------NDCEVRGRKK 159
P N K RF N E K+
Sbjct: 264 PAVNRTCLSKSWRFVGVGAQKEDGGGGSSSGTANIKPDPGIESFPFPATDNVGETSRGKR 323
Query: 160 PKTEN----------------RILNEDDDDVPLHLPNPMIGFGIPNES--FLTTHRKLPG 201
PK E+ R+ ED D + P + + + F + +
Sbjct: 324 PKDEDENAYPEEYTGYDDRGKRLRPEDMGDSSSFMETPWMQDEWKDNTYEFPSVMQPRLS 383
Query: 202 DALGP-----PYFYYENVAFAPKGVWQTISRFLFDVEPEFVDSKYFCAAARKRGYIHNLP 256
+LGP PYF+Y + W IS FLF + PE VD++ A R GY+HNLP
Sbjct: 384 QSLGPKVARRPYFFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHNLP 443
Query: 257 IENRFPVLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTCIA---SAKLTERIRKAVEN 313
NRF LP P TI DA P R WWP WD R N TC + L ERI + +
Sbjct: 444 TVNRFNTLPNPRLTIQDAMPHMRSWWPQWDIRKHFNS-GTCSNMKDATLLCERIGRRIAE 502
Query: 314 YDGEPPESVQKYVLYQSRKWNLVWVGRNKVAPLEPDEIETLLGFPRNHTRGGGISRTDRY 373
G+P + Q +L NL+W+ N ++PLEP+ +E ++G+P NHT GG +R
Sbjct: 503 CKGKPTQQDQTLILRHCHTSNLIWIAPNILSPLEPEHLECIMGYPMNHTNIGGGRLAERL 562
Query: 374 KSLGNSFQVDTVAYHLSVLKEMYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSE 433
K FQ DT+ YHLSVLK M+P+G+ VLSLFSGIGGAE+AL RLGI LK VVSVE
Sbjct: 563 KLFDYCFQTDTLGYHLSVLKSMFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCG 622
Query: 434 VNRNIVRSWWEQTNQKGNLIDLDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNR 493
++RNI++ WW+ + Q G L+ +++++ L A RLE LM GGFD VI +P L S
Sbjct: 623 LSRNILKRWWQTSGQTGELVQIEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLDLSKE 682
Query: 494 VS 495
+S
Sbjct: 683 IS 684
>AT3G17310.2 | Symbols: DRM3, AtDRM3 |
S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr3:5909294-5912838 REVERSE
LENGTH=710
Length = 710
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 232/482 (48%), Gaps = 69/482 (14%)
Query: 82 DTLVSLVKMGFKEEEALIAIERLGPNSSLEELVDFIGVAQI-AKAEDALLPPEDK----- 135
D + L++MGF +E +AIE++G + L + I + A+ D L E K
Sbjct: 204 DKTLRLLEMGFSNDEISMAIEKIGTKGQISVLAESIVTGEFPAECHDDLEDIEKKVSAAA 263
Query: 136 PRYNELSKPKKQRF------------------------------------NDCEVRGRKK 159
P N K RF N E K+
Sbjct: 264 PAVNRTCLSKSWRFVGVGAQKEDGGGGSSSGTANIKPDPGIESFPFPATDNVGETSRGKR 323
Query: 160 PKTEN----------------RILNEDDDDVPLHLPNPMIGFGIPNES--FLTTHRKLPG 201
PK E+ R+ ED D + P + + + F + +
Sbjct: 324 PKDEDENAYPEEYTGYDDRGKRLRPEDMGDSSSFMETPWMQDEWKDNTYEFPSVMQPRLS 383
Query: 202 DALGP-----PYFYYENVAFAPKGVWQTISRFLFDVEPEFVDSKYFCAAARKRGYIHNLP 256
+LGP PYF+Y + W IS FLF + PE VD++ A R GY+HNLP
Sbjct: 384 QSLGPKVARRPYFFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHNLP 443
Query: 257 IENRFPVLPQPPRTIHDAFPLTRKWWPSWDPRTKLNCLQTCIA---SAKLTERIRKAVEN 313
NRF LP P TI DA P R WWP WD R N TC + L ERI + +
Sbjct: 444 TVNRFNTLPNPRLTIQDAMPHMRSWWPQWDIRKHFNS-GTCSNMKDATLLCERIGRRIAE 502
Query: 314 YDGEPPESVQKYVLYQSRKWNLVWVGRNKVAPLEPDEIETLLGFPRNHTRGGGISRTDRY 373
G+P + Q +L NL+W+ N ++PLEP+ +E ++G+P NHT GG +R
Sbjct: 503 CKGKPTQQDQTLILRHCHTSNLIWIAPNILSPLEPEHLECIMGYPMNHTNIGGGRLAERL 562
Query: 374 KSLGNSFQVDTVAYHLSVLKEMYPKGMNVLSLFSGIGGAEVALHRLGIPLKNVVSVEKSE 433
K FQ DT+ YHLSVLK M+P+G+ VLSLFSGIGGAE+AL RLGI LK VVSVE
Sbjct: 563 KLFDYCFQTDTLGYHLSVLKSMFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCG 622
Query: 434 VNRNIVRSWWEQTNQKGNLIDLDDVQLLDADRLEQLMSATGGFDLVIGGSPCNNLAGSNR 493
++RNI++ WW+ + Q G L+ +++++ L A RLE LM GGFD VI +P L S
Sbjct: 623 LSRNILKRWWQTSGQTGELVQIEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLDLSKE 682
Query: 494 VS 495
+S
Sbjct: 683 IS 684