Miyakogusa Predicted Gene
- Lj0g3v0004489.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0004489.1 Non Chatacterized Hit- tr|I1JKG8|I1JKG8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4458
PE=,65.34,0,TCP,Transcription factor, TCP; FAMILY NOT NAMED,NULL;
TCP,Transcription factor TCP subgroup;
seg,NUL,NODE_28450_length_1266_cov_50.687992.path1.1
(307 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G45680.1 | Symbols: | TCP family transcription factor | chr... 191 5e-49
AT5G51910.2 | Symbols: | TCP family transcription factor | chr... 160 1e-39
AT5G51910.1 | Symbols: | TCP family transcription factor | chr... 160 1e-39
AT1G69690.1 | Symbols: | TCP family transcription factor | chr... 134 7e-32
AT3G47620.1 | Symbols: AtTCP14, TCP14 | TEOSINTE BRANCHED, cyclo... 134 8e-32
AT1G72010.1 | Symbols: | TCP family transcription factor | chr... 129 3e-30
AT3G27010.1 | Symbols: AT-TCP20, PCF1, TCP20, ATTCP20 | TEOSINTE... 129 4e-30
AT1G58100.1 | Symbols: | TCP family transcription factor | chr... 127 1e-29
AT1G35560.1 | Symbols: | TCP family transcription factor | chr... 120 1e-27
AT5G23280.1 | Symbols: | TCP family transcription factor | chr... 114 7e-26
AT5G08330.1 | Symbols: | TCP family transcription factor | chr... 114 8e-26
AT5G41030.1 | Symbols: | TCP family transcription factor | chr... 106 2e-23
AT2G37000.1 | Symbols: | TCP family transcription factor | chr... 102 3e-22
AT3G45150.1 | Symbols: TCP16 | TCP domain protein 16 | chr3:1653... 87 1e-17
AT1G58100.2 | Symbols: | TCP family transcription factor | chr... 72 4e-13
>AT2G45680.1 | Symbols: | TCP family transcription factor |
chr2:18820717-18821787 REVERSE LENGTH=356
Length = 356
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/302 (45%), Positives = 153/302 (50%), Gaps = 56/302 (18%)
Query: 43 PQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIA 102
P KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGH+SDGETIRWLLE+AEPAIIA
Sbjct: 69 PLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIA 128
Query: 103 ATGTGTVPAIAMSVNGTLRIXXXXXXXXXXXXXXXXGDPNEKKKRKRPGTXXXXXXXXXX 162
ATGTGTVPAIAMSVNGTL+I G+ KKKRKRP
Sbjct: 129 ATGTGTVPAIAMSVNGTLKIPTTTNADSDM------GENLMKKKRKRPSNSEYIDISDAV 182
Query: 163 XXXXXXXXXXLTTSNPNP------TIPQQTVIPLPQNVVPVWAIPSNXXXXXXXXXXXXX 216
TT+ P T+ QQ LPQ + P+WAIPSN
Sbjct: 183 SASSGLAPIATTTTIQPPQALASSTVAQQL---LPQGMYPMWAIPSNAMIPTVGAFFLIP 239
Query: 217 XMATAAPSNSNLQPQFF--------------------TIARPISAFVSSMVTPVQFQXXX 256
+A PSN QPQ T+ARP V P
Sbjct: 240 QIA--GPSN---QPQLLAFPAAAASPSSYVAAVQQASTMARPPPL----QVVPSSGFVSV 290
Query: 257 XXXXXXXXXRAT-VMAPSXXXXXXXXXX----------LRDFSLEIYDRQEL-QFMSRSS 304
RAT VMAPS LRDFSLEIY++QEL QFMS ++
Sbjct: 291 SDVSGSNLSRATSVMAPSSSSGVTTGSSSSIATTTTHTLRDFSLEIYEKQELHQFMSTTT 350
Query: 305 SK 306
++
Sbjct: 351 AR 352
>AT5G51910.2 | Symbols: | TCP family transcription factor |
chr5:21094704-21095585 REVERSE LENGTH=293
Length = 293
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 135/285 (47%), Gaps = 32/285 (11%)
Query: 16 PKEEPGTEEVAAEXXXXXXXQVNKAQTPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQ 75
PK +PG + E Q K + KR ++KDRHTKVEGRGRRIRMPA CAAR+FQ
Sbjct: 27 PKTKPGMMLMKQEDGYL---QPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQ 83
Query: 76 LTRELGHRSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLRIXXXXXXXXXXXXX 135
LTRELGH+SDGETIRWLLE AEPAII ATGTGTVPAIA+SVNGTL+I
Sbjct: 84 LTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRD 143
Query: 136 XXXGDPNEKKKRKRPGTXXXXXXXXXXXXXXXXXXXXLTTSNPNPTIPQQTVIPLPQNVV 195
KK+RKR T +T SN I Q V
Sbjct: 144 GDG--DLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNT----QGFV 197
Query: 196 PVWAIPSNXXXXXXXXXXXXXXMATAAPSNSNLQPQFFTIARPISAFVSSMVTPVQFQXX 255
P W P A P+ + P ARP+S++VS+
Sbjct: 198 PFW--PMGMGTAFVTGGPDQMGQMWAIPTVAT-APFLNVGARPVSSYVSNA--------- 245
Query: 256 XXXXXXXXXXRATVMAPSXXXXXXXXXXLRDFSLEIYDRQELQFM 300
+ A LRDFSLEIYD++ELQF+
Sbjct: 246 -----------SDAEAEMETSGGGTTQPLRDFSLEIYDKRELQFL 279
>AT5G51910.1 | Symbols: | TCP family transcription factor |
chr5:21094704-21095585 REVERSE LENGTH=293
Length = 293
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/285 (40%), Positives = 135/285 (47%), Gaps = 32/285 (11%)
Query: 16 PKEEPGTEEVAAEXXXXXXXQVNKAQTPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQ 75
PK +PG + E Q K + KR ++KDRHTKVEGRGRRIRMPA CAAR+FQ
Sbjct: 27 PKTKPGMMLMKQEDGYL---QPVKTKPAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQ 83
Query: 76 LTRELGHRSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLRIXXXXXXXXXXXXX 135
LTRELGH+SDGETIRWLLE AEPAII ATGTGTVPAIA+SVNGTL+I
Sbjct: 84 LTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRD 143
Query: 136 XXXGDPNEKKKRKRPGTXXXXXXXXXXXXXXXXXXXXLTTSNPNPTIPQQTVIPLPQNVV 195
KK+RKR T +T SN I Q V
Sbjct: 144 GDG--DLIKKRRKRNCTSDFVDVNDSCHSSVTSGLAPITASNYGVNILNVNT----QGFV 197
Query: 196 PVWAIPSNXXXXXXXXXXXXXXMATAAPSNSNLQPQFFTIARPISAFVSSMVTPVQFQXX 255
P W P A P+ + P ARP+S++VS+
Sbjct: 198 PFW--PMGMGTAFVTGGPDQMGQMWAIPTVAT-APFLNVGARPVSSYVSNA--------- 245
Query: 256 XXXXXXXXXXRATVMAPSXXXXXXXXXXLRDFSLEIYDRQELQFM 300
+ A LRDFSLEIYD++ELQF+
Sbjct: 246 -----------SDAEAEMETSGGGTTQPLRDFSLEIYDKRELQFL 279
>AT1G69690.1 | Symbols: | TCP family transcription factor |
chr1:26216449-26217426 FORWARD LENGTH=325
Length = 325
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 61/75 (81%), Positives = 67/75 (89%)
Query: 43 PQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIA 102
P KR STKDRHTKVEGRGRRIRMPA CAAR+FQLTRELGH+SDGETI WLL+ AEPA+IA
Sbjct: 46 PPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIA 105
Query: 103 ATGTGTVPAIAMSVN 117
ATGTGT+PA S+N
Sbjct: 106 ATGTGTIPANFTSLN 120
>AT3G47620.1 | Symbols: AtTCP14, TCP14 | TEOSINTE BRANCHED,
cycloidea and PCF (TCP) 14 | chr3:17559004-17560473
FORWARD LENGTH=489
Length = 489
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 60/75 (80%), Positives = 68/75 (90%)
Query: 43 PQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIA 102
P KRASTKDRHTKV+GRGRRIRMPA CAAR+FQLTRELGH+SDGETI WLL+ AEP++IA
Sbjct: 111 PLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIA 170
Query: 103 ATGTGTVPAIAMSVN 117
ATGTGT+PA S+N
Sbjct: 171 ATGTGTIPANFTSLN 185
>AT1G72010.1 | Symbols: | TCP family transcription factor |
chr1:27107844-27108971 FORWARD LENGTH=375
Length = 375
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 66/73 (90%)
Query: 49 TKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAATGTGT 108
TKDRHTKV+GRGRRIRMPA CAAR+FQLTRELGH+SDGETI WLL+ AEPAIIA+TGTGT
Sbjct: 63 TKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGT 122
Query: 109 VPAIAMSVNGTLR 121
+PA ++N +LR
Sbjct: 123 IPANFSTLNASLR 135
>AT3G27010.1 | Symbols: AT-TCP20, PCF1, TCP20, ATTCP20 | TEOSINTE
BRANCHED 1, cycloidea, PCF (TCP)-domain family protein
20 | chr3:9957810-9958754 REVERSE LENGTH=314
Length = 314
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 66/73 (90%)
Query: 38 NKAQTPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAE 97
N+ Q KR+S KDRHTKVEGRGRRIRMPA CAARIFQLTRELGH+SDGETI+WLL+ AE
Sbjct: 67 NQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAE 126
Query: 98 PAIIAATGTGTVP 110
P+IIAATG+GT+P
Sbjct: 127 PSIIAATGSGTIP 139
>AT1G58100.1 | Symbols: | TCP family transcription factor |
chr1:21512680-21513885 REVERSE LENGTH=401
Length = 401
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 67/74 (90%)
Query: 48 STKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAATGTG 107
STKDRHTKV+GRGRRIRMPA CAAR+FQLTRELGH+SDGETI WLL+ AEPAI+AATGTG
Sbjct: 59 STKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTG 118
Query: 108 TVPAIAMSVNGTLR 121
T+PA +++ +LR
Sbjct: 119 TIPANFSTLSVSLR 132
>AT1G35560.1 | Symbols: | TCP family transcription factor |
chr1:13116099-13117124 REVERSE LENGTH=341
Length = 341
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 64/73 (87%)
Query: 49 TKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAATGTGT 108
+KDRH KV+GRGRRIRMPA CAAR+FQLTREL H+SDGETI WLL+ AEPAIIAATGTGT
Sbjct: 55 SKDRHIKVDGRGRRIRMPAICAARVFQLTRELQHKSDGETIEWLLQQAEPAIIAATGTGT 114
Query: 109 VPAIAMSVNGTLR 121
+PA ++N +LR
Sbjct: 115 IPANISTLNISLR 127
>AT5G23280.1 | Symbols: | TCP family transcription factor |
chr5:7843017-7843769 FORWARD LENGTH=250
Length = 250
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 58/67 (86%)
Query: 45 KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAAT 104
K+ KDRH+KV+GRGRRIRMP CAAR+FQLTRELGH+SDG+TI WLL AEP+IIAAT
Sbjct: 35 KKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT 94
Query: 105 GTGTVPA 111
GTGT PA
Sbjct: 95 GTGTTPA 101
>AT5G08330.1 | Symbols: | TCP family transcription factor |
chr5:2680828-2681547 FORWARD LENGTH=239
Length = 239
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 59/67 (88%)
Query: 45 KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAAT 104
K+ +KDRH+KV+GRGRRIRMP CAAR+FQLTRELGH+SDG+TI WLL AEP+IIAAT
Sbjct: 27 KKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAAT 86
Query: 105 GTGTVPA 111
GTGT PA
Sbjct: 87 GTGTTPA 93
>AT5G41030.1 | Symbols: | TCP family transcription factor |
chr5:16428706-16429437 FORWARD LENGTH=243
Length = 243
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 56/67 (83%)
Query: 44 QKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAA 103
+K+ KDRH KVEGRGRR+R+P CAARI+QLT+ELGH+SDGET+ WLL+HAEP+I++A
Sbjct: 63 EKKKPNKDRHLKVEGRGRRVRLPPLCAARIYQLTKELGHKSDGETLEWLLQHAEPSILSA 122
Query: 104 TGTGTVP 110
T G P
Sbjct: 123 TVNGIKP 129
>AT2G37000.1 | Symbols: | TCP family transcription factor |
chr2:15540390-15540956 FORWARD LENGTH=188
Length = 188
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 52/62 (83%)
Query: 47 ASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHAEPAIIAATGT 106
A TKDRHTKV GR RR+ MPA AARIFQLTRELGH+++GETI WLL AEP+IIAATG
Sbjct: 41 ARTKDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATGY 100
Query: 107 GT 108
GT
Sbjct: 101 GT 102
>AT3G45150.1 | Symbols: TCP16 | TCP domain protein 16 |
chr3:16531179-16531676 FORWARD LENGTH=165
Length = 165
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
Query: 37 VNKAQTPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHRSDGETIRWLLEHA 96
+N +Q + R + KDRH K+ GR RRIR+P + A ++F+LT+ELG ++DGET+ WLL++A
Sbjct: 7 INNSQ--KARRTPKDRHLKIGGRDRRIRIPPSVAPQLFRLTKELGFKTDGETVSWLLQNA 64
Query: 97 EPAIIAATGTG 107
EPAI AATG G
Sbjct: 65 EPAIFAATGHG 75
>AT1G58100.2 | Symbols: | TCP family transcription factor |
chr1:21512680-21513885 REVERSE LENGTH=377
Length = 377
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/34 (91%), Positives = 33/34 (97%)
Query: 48 STKDRHTKVEGRGRRIRMPATCAARIFQLTRELG 81
STKDRHTKV+GRGRRIRMPA CAAR+FQLTRELG
Sbjct: 59 STKDRHTKVDGRGRRIRMPALCAARVFQLTRELG 92