Miyakogusa Predicted Gene

Lj0g3v0004319.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004319.1 Non Chatacterized Hit- tr|E1Z235|E1Z235_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,29.11,0.000000000002,DUF1990,Domain of unknown function
DUF1990,CUFF.281.1
         (193 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17695.3 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   235   2e-62
AT2G17695.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   235   2e-62
AT2G17695.1 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   235   2e-62

>AT2G17695.3 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; CONTAINS
           InterPro DOMAIN/s: Domain of unknown function DUF1990
           (InterPro:IPR018960). | chr2:7684214-7685009 REVERSE
           LENGTH=205
          Length = 205

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 100/161 (62%), Positives = 132/161 (81%)

Query: 1   MFFLSWGRPSPQDQKACINKAGTFNYDDKYKGATAKSLSSLKADEGLSKDGFLLNNARVL 60
           M FLSWGRPS + Q+  INK GTFNYD+KY+G +++S++ LK D  + KDGFL+N+ARVL
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  MGSGVETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGVTFCVCVKEFLPWVMMPLQIAYV 120
           +GSG E++EKGK AL++W+HFG++WAFVDP TPV+ G  FC+CVKE LPWVM+PLQ+ YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NETSTTKNRVASFGFGSGTLNGHLLAGEERFSIEIDENNQV 161
           +E+  ++   A FG+GSGTL GHLLAGEE+FSIE+D N +V
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEV 161


>AT2G17695.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           chloroplast; CONTAINS InterPro DOMAIN/s: Domain of
           unknown function DUF1990 (InterPro:IPR018960); Has 30201
           Blast hits to 17322 proteins in 780 species: Archae -
           12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422;
           Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
           (source: NCBI BLink). | chr2:7684214-7685009 REVERSE
           LENGTH=205
          Length = 205

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 100/161 (62%), Positives = 132/161 (81%)

Query: 1   MFFLSWGRPSPQDQKACINKAGTFNYDDKYKGATAKSLSSLKADEGLSKDGFLLNNARVL 60
           M FLSWGRPS + Q+  INK GTFNYD+KY+G +++S++ LK D  + KDGFL+N+ARVL
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  MGSGVETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGVTFCVCVKEFLPWVMMPLQIAYV 120
           +GSG E++EKGK AL++W+HFG++WAFVDP TPV+ G  FC+CVKE LPWVM+PLQ+ YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NETSTTKNRVASFGFGSGTLNGHLLAGEERFSIEIDENNQV 161
           +E+  ++   A FG+GSGTL GHLLAGEE+FSIE+D N +V
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEV 161


>AT2G17695.1 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           chloroplast; CONTAINS InterPro DOMAIN/s: Domain of
           unknown function DUF1990 (InterPro:IPR018960); Has 259
           Blast hits to 259 proteins in 120 species: Archae - 0;
           Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57;
           Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
           | chr2:7684214-7685009 REVERSE LENGTH=205
          Length = 205

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 100/161 (62%), Positives = 132/161 (81%)

Query: 1   MFFLSWGRPSPQDQKACINKAGTFNYDDKYKGATAKSLSSLKADEGLSKDGFLLNNARVL 60
           M FLSWGRPS + Q+  INK GTFNYD+KY+G +++S++ LK D  + KDGFL+N+ARVL
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  MGSGVETFEKGKSALRSWRHFGLNWAFVDPKTPVQQGVTFCVCVKEFLPWVMMPLQIAYV 120
           +GSG E++EKGK AL++W+HFG++WAFVDP TPV+ G  FC+CVKE LPWVM+PLQ+ YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NETSTTKNRVASFGFGSGTLNGHLLAGEERFSIEIDENNQV 161
           +E+  ++   A FG+GSGTL GHLLAGEE+FSIE+D N +V
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEV 161