Miyakogusa Predicted Gene

Lj0g3v0004199.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0004199.1 Non Chatacterized Hit- tr|B7FJK4|B7FJK4_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,83.45,0,FAD_binding_6,Oxidoreductase, FAD-binding domain;
NAD_binding_1,Oxidoreductase FAD/NAD(P)-binding; n,CUFF.276.1
         (296 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17770.1 | Symbols: ATCBR, CBR1, CBR | NADH:cytochrome B5 red...   372   e-103
AT5G20080.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase | ch...   211   4e-55
AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |...   169   2e-42
AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | nitrate reductase 1 | c...   164   8e-41

>AT5G17770.1 | Symbols: ATCBR, CBR1, CBR | NADH:cytochrome B5
           reductase 1 | chr5:5864543-5866495 REVERSE LENGTH=281
          Length = 281

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 170/246 (69%), Positives = 206/246 (83%)

Query: 51  KNPKGSLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDSQGEE 110
           K  +  LDP+NFKEFKLVK+ QLS N A+F F LPT +S+LGLP+G+HI  RG+D QGE+
Sbjct: 36  KKRRVCLDPENFKEFKLVKRHQLSHNVAKFVFELPTSTSVLGLPIGQHISCRGKDGQGED 95

Query: 111 VMRSYTPITLDSDRGYFDLVVKMYPNGKMSHHFRQMKEGDSLAVKGPKGRFGYKPGQVRA 170
           V++ YTP TLDSD G F+LV+KMYP G+MSHHFR+M+ GD LAVKGPKGRF Y+PGQ RA
Sbjct: 96  VIKPYTPTTLDSDVGRFELVIKMYPQGRMSHHFREMRVGDHLAVKGPKGRFKYQPGQFRA 155

Query: 171 FGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEELDNFANIYPYRFQ 230
           FGM+AGGSGITPMFQ+ RAILENP DKTKV+LIYANVT DDILLKEEL+     YP +F+
Sbjct: 156 FGMLAGGSGITPMFQVARAILENPTDKTKVHLIYANVTYDDILLKEELEGLTTNYPEQFK 215

Query: 231 LYHVLNKPPTEWNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPMNKAIANHLNTLGYTS 290
           +++VLN+PP  W+GGVGF+SKEMI +HCPAP+ DIQILRCGPPPMNKA+A +L  LGY+ 
Sbjct: 216 IFYVLNQPPEVWDGGVGFVSKEMIQTHCPAPASDIQILRCGPPPMNKAMAANLEALGYSP 275

Query: 291 TMQFEF 296
            MQF+F
Sbjct: 276 EMQFQF 281


>AT5G20080.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase |
           chr5:6782708-6786360 FORWARD LENGTH=328
          Length = 328

 Score =  211 bits (538), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 116/262 (44%), Positives = 161/262 (61%), Gaps = 20/262 (7%)

Query: 53  PKGSLDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRAR---GRDSQGE 109
           PK +L+P  + EFKL    ++S N   FRF+   PS+ LGL V   +  R   G +++G+
Sbjct: 69  PKTALNPDKWLEFKLQDTARVSHNTQLFRFSF-DPSAELGLHVASCLLTRAPLGYNAEGK 127

Query: 110 E--VMRSYTPITLDSDRGYFDLVVKMYPNGKMSHHFRQMKEGDSLAVKGPKGRFGYKPGQ 167
              V+R YTPI+    +GYFDL++K+YP+GKMS HF  +K GD L VKGP  +F Y P  
Sbjct: 128 TKYVIRPYTPISDPEAKGYFDLLIKVYPDGKMSQHFASLKPGDVLEVKGPVEKFKYSPNM 187

Query: 168 VRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEELDNFANIYPY 227
            +  GMIAGGSGITPM Q+I AI++NP+D T++ L+YANV+ DDILLK++LD     +P 
Sbjct: 188 KKHIGMIAGGSGITPMLQVIDAIVKNPEDNTQISLLYANVSPDDILLKQKLDVLQANHP- 246

Query: 228 RFQLYHVLNKPPTEWNGGVGFISKEMIDSHCPAPSPDIQILRCGPPPMNKAIANH----- 282
             ++++ ++ P   W GGVG+ISK+M     P P+ D  IL CGPP M + I+       
Sbjct: 247 NLKIFYTVDNPTKNWKGGVGYISKDMALKGLPLPTDDTLILVCGPPGMMEHISGGKAPDW 306

Query: 283 --------LNTLGYTSTMQFEF 296
                   L  LGYT  M F+F
Sbjct: 307 SQGEVKGILKELGYTEEMVFKF 328


>AT1G37130.1 | Symbols: NIA2, B29, NIA2-1, CHL3, NR, NR2, ATNR2 |
           nitrate reductase 2 | chr1:14158617-14161652 FORWARD
           LENGTH=917
          Length = 917

 Score =  169 bits (428), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 148/259 (57%), Gaps = 22/259 (8%)

Query: 57  LDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDSQGEEVMRSYT 116
           ++P+     +LV+KT +S +  +FRFALP    +LGLPVGKHI      +  +  +R+YT
Sbjct: 657 VNPRAKVPVQLVEKTSISHDVRKFRFALPVEDMVLGLPVGKHIFLCATIND-KLCLRAYT 715

Query: 117 PITLDSDRGYFDLVVKMY--------PNGK-MSHHFRQMKEGDSLAVKGPKGRFGY---- 163
           P +     GYF+LVVK+Y        PNG  MS +   +  G +L +KGP G   Y    
Sbjct: 716 PSSTVDVVGYFELVVKIYFGGVHPRFPNGGLMSQYLDSLPIGSTLEIKGPLGHVEYLGKG 775

Query: 164 ------KPGQVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEE 217
                 KP       M+AGG+GITP++Q+I+AIL++P+D+T++Y+IYAN T +DILL+EE
Sbjct: 776 SFTVHGKPKFADKLAMLAGGTGITPVYQIIQAILKDPEDETEMYVIYANRTEEDILLREE 835

Query: 218 LDNFANIYPYRFQLYHVLNKPPTEWNGGVGFISKEMIDSHCP-APSPDIQILRCGPPPMN 276
           LD +A  YP R ++++V+      W    GFIS+ ++  H P         + CGPPPM 
Sbjct: 836 LDGWAEQYPDRLKVWYVVESAKEGWAYSTGFISEAIMREHIPDGLDGSALAMACGPPPMI 895

Query: 277 K-AIANHLNTLGYTSTMQF 294
           + A+  +L  + Y     F
Sbjct: 896 QFAVQPNLEKMQYNIKEDF 914


>AT1G77760.1 | Symbols: NIA1, GNR1, NR1 | nitrate reductase 1 |
           chr1:29236005-29239367 REVERSE LENGTH=917
          Length = 917

 Score =  164 bits (414), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 148/253 (58%), Gaps = 22/253 (8%)

Query: 57  LDPQNFKEFKLVKKTQLSPNAARFRFALPTPSSILGLPVGKHIRARGRDSQGEEVMRSYT 116
           ++P+     +L++KT +S +  +FRFALP+    LGLPVGKH+     +   +  +R+YT
Sbjct: 657 VNPREKIPVRLIEKTSISHDVRKFRFALPSEDQQLGLPVGKHVFVCA-NINDKLCLRAYT 715

Query: 117 PITLDSDRGYFDLVVKMY--------PNGK-MSHHFRQMKEGDSLAVKGPKGRFGYK--- 164
           P +     G+ DLVVK+Y        PNG  MS H   +  G  + +KGP G   YK   
Sbjct: 716 PTSAIDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSMIDIKGPLGHIEYKGKG 775

Query: 165 -------PGQVRAFGMIAGGSGITPMFQLIRAILENPKDKTKVYLIYANVTVDDILLKEE 217
                  P   +   M+AGG+GITP++Q+I++IL +P+D+T++Y++YAN T DDIL++EE
Sbjct: 776 NFLVSGKPKFAKKLAMLAGGTGITPIYQIIQSILSDPEDETEMYVVYANRTEDDILVREE 835

Query: 218 LDNFANIYPYRFQLYHVLNKPPTEWNGGVGFISKEMIDSHCP-APSPDIQILRCGPPPMN 276
           L+ +A+ +  R ++++V+      W+   GFI++ ++  H P     +   L CGPPPM 
Sbjct: 836 LEGWASKHKERLKIWYVVEIAKEGWSYSTGFITEAVLREHIPEGLEGESLALACGPPPMI 895

Query: 277 K-AIANHLNTLGY 288
           + A+  +L  +GY
Sbjct: 896 QFALQPNLEKMGY 908