Miyakogusa Predicted Gene
- Lj0g3v0004019.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0004019.1 CUFF.238.1
(244 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G43140.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 277 5e-75
AT2G14860.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 237 5e-63
AT4G33905.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 237 6e-63
AT5G19750.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 99 2e-21
AT4G04470.1 | Symbols: PMP22 | Peroxisomal membrane 22 kDa (Mpv1... 87 1e-17
AT2G42770.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 82 2e-16
AT3G24570.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 82 4e-16
AT4G14305.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 80 1e-15
AT1G52870.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 78 6e-15
AT4G03410.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 74 1e-13
AT4G03410.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 73 2e-13
AT3G24570.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 64 6e-11
AT4G14305.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 60 2e-09
AT1G52870.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP... 59 2e-09
>AT5G43140.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr5:17321570-17323224 FORWARD
LENGTH=254
Length = 254
Score = 277 bits (708), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 123/178 (69%), Positives = 152/178 (85%)
Query: 66 GFIGWYLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLLIL 125
F+ WYLRKLE+HP +TKSITTS+I+ A+DLTSQMIT+ + SFDL RT+RMA +GL+ L
Sbjct: 77 AFLRWYLRKLESHPFMTKSITTSVIYMAADLTSQMITMEPTGSFDLIRTARMASFGLIFL 136
Query: 126 GPSQHMWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFSYNGAVQGESCDEIIAR 185
GPSQH+WF++LSKILPK DV TT KKI +GQ +FGPV N+VF+SYN A+QGE+ +EI+AR
Sbjct: 137 GPSQHLWFSYLSKILPKRDVLTTFKKIMMGQVLFGPVSNTVFYSYNAALQGENSEEIVAR 196
Query: 186 LKRDLLPTLLGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVWTIYLTYMANRANLSS 243
LKRDLLPTL G ++WP CDFVTFK+VP+HLQPL+NSSCAY+WTIYLTYMAN+ S
Sbjct: 197 LKRDLLPTLKNGLMYWPVCDFVTFKYVPVHLQPLMNSSCAYIWTIYLTYMANQTKADS 254
>AT2G14860.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr2:6387820-6389563 REVERSE LENGTH=252
Length = 252
Score = 237 bits (605), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 140/175 (80%)
Query: 64 KLGFIGWYLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLL 123
++GF+GWYL +++HPV+TKS+T+S+I+ A+DL+SQ I SS S+DL RT+RM YGL
Sbjct: 70 RIGFVGWYLGMVKSHPVVTKSVTSSLIYIAADLSSQTIAKTSSESYDLVRTARMGGYGLF 129
Query: 124 ILGPSQHMWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFSYNGAVQGESCDEII 183
+LGP+ H WFNF+S++ PK D+ TT KK+ +GQ ++GP++ +FFS N ++QGE I+
Sbjct: 130 VLGPTLHYWFNFMSRLFPKQDLITTFKKMAMGQTIYGPIMTVIFFSLNASLQGERGSVIL 189
Query: 184 ARLKRDLLPTLLGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVWTIYLTYMANR 238
ARLKRDLLP L G ++WP CDF+TF+F P+HLQPL+++S +YVWTIY+TYMANR
Sbjct: 190 ARLKRDLLPALFNGVMYWPLCDFITFRFFPVHLQPLVSNSFSYVWTIYMTYMANR 244
>AT4G33905.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:16254065-16255592 REVERSE
LENGTH=261
Length = 261
Score = 237 bits (604), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 141/175 (80%)
Query: 66 GFIGWYLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLLIL 125
GFIGWYL +++ PVLTKS+T+S+I+ A+DL+SQ I AS S+DL RT+RM YGLLIL
Sbjct: 81 GFIGWYLGMVKSRPVLTKSVTSSLIYIAADLSSQTIPQASVDSYDLVRTARMGGYGLLIL 140
Query: 126 GPSQHMWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFSYNGAVQGESCDEIIAR 185
GP+ H WFN +S + PK D+ TT KK+ +GQ V+GP +N VFFS N A+QGE+ EI+AR
Sbjct: 141 GPTLHYWFNLMSSLFPKRDLITTFKKMAMGQTVYGPAMNVVFFSLNAALQGENGSEIVAR 200
Query: 186 LKRDLLPTLLGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVWTIYLTYMANRAN 240
LKRDLLPT+L G ++WP CDF+TFKF P++LQPL+++S +Y+WTIY+TYMA+RA
Sbjct: 201 LKRDLLPTMLNGVMYWPLCDFITFKFCPVYLQPLVSNSFSYLWTIYITYMASRAT 255
>AT5G19750.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr5:6677124-6679127 FORWARD LENGTH=288
Length = 288
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 96/175 (54%), Gaps = 2/175 (1%)
Query: 64 KLGFIGWYLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLL 123
K + WY L PVLTK++T +++ DL Q+ T+ ++S D KRT GL
Sbjct: 111 KWSLLSWYQALLSNSPVLTKAVTAALLNLVGDLICQL-TINKTSSLDKKRTLTFTFLGLG 169
Query: 124 ILGPSQHMWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFSYNGAVQGESCDEII 183
++GP+ H W+ +LSK++ + + + ++ L Q VF P+ VF S ++G+ + +I
Sbjct: 170 LVGPTLHFWYLYLSKVVTASGLSGAVIRLLLDQFVFAPIFVGVFLSAVVTLEGKPSN-VI 228
Query: 184 ARLKRDLLPTLLGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVWTIYLTYMANR 238
+L+++ ++ W P F+ F+FVP + Q L ++ A W + L++ A++
Sbjct: 229 PKLQQEWTGAMIANWQLWIPFQFLNFRFVPQNYQVLASNVVALAWNVILSFKAHK 283
>AT4G04470.1 | Symbols: PMP22 | Peroxisomal membrane 22 kDa
(Mpv17/PMP22) family protein | chr4:2227963-2229226
REVERSE LENGTH=190
Length = 190
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 4/176 (2%)
Query: 71 YLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLLILGPSQH 130
YL +L+ HP+ TK+IT ++ SD+ SQ L+ L+R I+ LGP+ H
Sbjct: 14 YLSQLQQHPLRTKAITAGVLSGVSDVVSQ--KLSGIQKIQLRRVLLKVIFAGGFLGPAGH 71
Query: 131 MWFNFLSKILP-KTDVPTTLKKIFLGQAVFGPVINSVFFSYNGAVQGESCDEIIARLKRD 189
+ +L K K D T KK+ L Q P+ + +F Y G V + ++ +
Sbjct: 72 FFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKK 131
Query: 190 LLPTL-LGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVWTIYLTYMANRANLSSA 244
PT+ L F+P ++ +K+VP+H + +L+S A+ W I+LT A L+ A
Sbjct: 132 TYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTLALA 187
>AT2G42770.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr2:17798635-17799927 REVERSE
LENGTH=232
Length = 232
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 110 DLKRTSRMAIYGLLILGPSQHMWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFS 169
D R RM+ YG L+ GP + W+ FL LPK + K+ L Q + GP + +V F+
Sbjct: 105 DWIRALRMSSYGFLLYGPGSYAWYQFLDHSLPKPTATNLVLKVLLNQVILGPSVIAVIFA 164
Query: 170 YNGAVQGESCDEIIARLKRDLLPTLLGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVWT 229
+N G+ E+ + ++D LPTLL G FW P + F VP+ + S + W
Sbjct: 165 WNNLWLGK-LSELGNKYQKDALPTLLYGFRFWVPVSILNFWVVPLQARVAFMSMGSVFWN 223
Query: 230 IYLT 233
YL+
Sbjct: 224 FYLS 227
>AT3G24570.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr3:8966675-8968530 REVERSE LENGTH=235
Length = 235
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 39/208 (18%)
Query: 70 WYLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASS----------------------- 106
WY R L HPV T+ I++ ++ D+T+Q IT +++
Sbjct: 7 WYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVK 66
Query: 107 ----ASF--DLKRTSRMAIYGLLILGPSQHMWFNFLSKI--LPKTDVPTTLK----KIFL 154
A F + KR + +++G +GP H W+ L K L VP + + K+ +
Sbjct: 67 WKQDAEFKVNWKRVAITSMFGFGFVGPVGHFWYEGLDKFIKLKLRYVPKSTRFVAAKVAM 126
Query: 155 GQAVFGPVINSVFFSYNGAVQGESCDEIIARLKRDLLPTLL--GGALFWPPCDFVTFKFV 212
+FGPV VFF+Y G G++ E+ LKRD LP L GGA WP F++V
Sbjct: 127 DGLIFGPVDLLVFFTYMGFATGKNTAEVKEGLKRDFLPALALEGGA--WPLLQIANFRYV 184
Query: 213 PIHLQPLLNSSCAYVWTIYLTYMANRAN 240
P+ Q L + V + +L+++ + +
Sbjct: 185 PVQYQLLYVNIFCLVDSAFLSWVEQQKD 212
>AT4G14305.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:8235335-8236605 REVERSE LENGTH=185
Length = 185
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 71 YLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLLILGPSQH 130
YL +L+AHP+ TK+IT ++ SD +Q I+ F +R + +YG GP H
Sbjct: 12 YLIQLQAHPLRTKAITAGVLAGCSDAIAQKISGVKRIQF--RRLLLLMLYGFAYGGPFGH 69
Query: 131 MWFNFLSKILP-KTDVPTTLKKIFLGQAVFGPVINSVFFSYNG-AVQGESCDEIIARLKR 188
+ + I K T KK+ L Q P N +F SY G V+G + +L +
Sbjct: 70 FFHKLMDTIFKGKKGNSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGK 129
Query: 189 DLLPTLLGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVWTIYLTYMANRANLSSA 244
D L FWP +V +++VP+ + L +S A W+I+L A + +A
Sbjct: 130 DYPTIQLTAWKFWPIVGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKARSPVIKNA 185
>AT1G52870.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr1:19685856-19687678 FORWARD
LENGTH=366
Length = 366
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%)
Query: 71 YLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLLILGPSQH 130
Y L+ +PVL K + + ++++ D +Q D RT R + G + G H
Sbjct: 173 YEEALKQNPVLAKMVISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLSH 232
Query: 131 MWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFSYNGAVQGESCDEIIARLKRDL 190
++ F ++ P D K+ Q V+ + NS++F+ G ++ ES I LK
Sbjct: 233 FYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKATF 292
Query: 191 LPTLLGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVWTIYLTYMANR 238
LP L G WP +T+ VP+ + L +W L+ +N
Sbjct: 293 LPMLTAGWKLWPFAHLITYGLVPVEQRLLWVDCVELIWVTILSTYSNE 340
>AT4G03410.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:1501907-1503486 FORWARD LENGTH=317
Length = 317
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 1/175 (0%)
Query: 71 YLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLLILGPSQH 130
Y + L+ +PVL K + I+++ D +Q FD R R + G + G H
Sbjct: 131 YEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSH 190
Query: 131 MWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFSYNGAVQGESCDEIIARLKRDL 190
++ F + P + K+ Q V+ + NS++F+ G ++ +S +I + +K
Sbjct: 191 YYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTF 250
Query: 191 LPTLLGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVW-TIYLTYMANRANLSSA 244
LP L G WP VT+ +P+ + L +W TI TY +A ++
Sbjct: 251 LPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQAS 305
>AT4G03410.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:1501907-1503503 FORWARD LENGTH=361
Length = 361
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 1/175 (0%)
Query: 71 YLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLLILGPSQH 130
Y + L+ +PVL K + I+++ D +Q FD R R + G + G H
Sbjct: 131 YEQILKTNPVLAKMAISGIVYSLGDWIAQCYEGKPLFEFDRTRVLRSGLVGFTLHGSLSH 190
Query: 131 MWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFSYNGAVQGESCDEIIARLKRDL 190
++ F + P + K+ Q V+ + NS++F+ G ++ +S +I + +K
Sbjct: 191 YYYQFCEALFPFQEWWVVPAKVAFDQTVWSAIWNSIYFTVLGLLRFQSPADIFSEIKTTF 250
Query: 191 LPTLLGGALFWPPCDFVTFKFVPIHLQPLLNSSCAYVW-TIYLTYMANRANLSSA 244
LP L G WP VT+ +P+ + L +W TI TY +A ++
Sbjct: 251 LPMLTAGWKLWPLAHLVTYGVIPVDQRLLWVDCIELIWVTILSTYSNEKAEAQAS 305
>AT3G24570.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr3:8966675-8968530 REVERSE LENGTH=222
Length = 222
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 70 WYLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSAS--FDLKRTSRMAIYGLLI-LG 126
WY R L HPV T+ I++ ++ D+T+Q IT +++ L T++ A I +
Sbjct: 7 WYQRCLTVHPVKTQVISSGFLWGFGDVTAQYITHSTAKRRLLRLTETNKDADADAEIKVK 66
Query: 127 PSQHMWFNFLSKILPKTD---------------VPTTLK----KIFLGQAVFGPVINSVF 167
Q F K + T VP + + K+ + +FGPV VF
Sbjct: 67 WKQDAEFKVNWKRVAITSMYEGLDKFIKLKLRYVPKSTRFVAAKVAMDGLIFGPVDLLVF 126
Query: 168 FSYNGAVQGESCDEIIARLKRDLLPTLL--GGALFWPPCDFVTFKFVPIHLQPLLNSSCA 225
F+Y G G++ E+ LKRD LP L GGA WP F++VP+ Q L +
Sbjct: 127 FTYMGFATGKNTAEVKEGLKRDFLPALALEGGA--WPLLQIANFRYVPVQYQLLYVNIFC 184
Query: 226 YVWTIYLTYMANRAN 240
V + +L+++ + +
Sbjct: 185 LVDSAFLSWVEQQKD 199
>AT4G14305.2 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr4:8235335-8236582 REVERSE LENGTH=173
Length = 173
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 86 TTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLLILGPSQHMWFNFLSKILP-KTD 144
++ SD +Q I+ F +R + +YG GP H + + I K
Sbjct: 15 NQGVLAGCSDAIAQKISGVKRIQF--RRLLLLMLYGFAYGGPFGHFFHKLMDTIFKGKKG 72
Query: 145 VPTTLKKIFLGQAVFGPVINSVFFSYNG-AVQGESCDEIIARLKRDLLPTLLGGALFWPP 203
T KK+ L Q P N +F SY G V+G + +L +D L FWP
Sbjct: 73 NSTVAKKVLLEQLTSSPWNNFLFMSYYGLVVEGRPWKLVKHKLGKDYPTIQLTAWKFWPI 132
Query: 204 CDFVTFKFVPIHLQPLLNSSCAYVWTIYLTYMANRANLSSA 244
+V +++VP+ + L +S A W+I+L A + +A
Sbjct: 133 VGWVNYQYVPLQFRVLFSSFVASCWSIFLNLKARSPVIKNA 173
>AT1G52870.1 | Symbols: | Peroxisomal membrane 22 kDa (Mpv17/PMP22)
family protein | chr1:19685856-19687310 FORWARD
LENGTH=306
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%)
Query: 71 YLRKLEAHPVLTKSITTSIIFAASDLTSQMITLASSASFDLKRTSRMAIYGLLILGPSQH 130
Y L+ +PVL K + + ++++ D +Q D RT R + G + G H
Sbjct: 173 YEEALKQNPVLAKMVISGVVYSVGDWIAQCYEGKPLFEIDRARTLRSGLVGFTLHGSLSH 232
Query: 131 MWFNFLSKILPKTDVPTTLKKIFLGQAVFGPVINSVFFSYNGAVQGESCDEIIARLKRDL 190
++ F ++ P D K+ Q V+ + NS++F+ G ++ ES I LK
Sbjct: 233 FYYQFCEELFPFQDWWVVPVKVAFDQTVWSAIWNSIYFTVLGFLRFESPISIFKELKATF 292
Query: 191 LPTLLGGAL 199
LP L G+
Sbjct: 293 LPMLTVGSF 301