Miyakogusa Predicted Gene

Lj0g3v0002849.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0002849.1 Non Chatacterized Hit- tr|B9RLA2|B9RLA2_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,44.74,2e-16,seg,NULL,gene.g227.t1.1
         (148 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G25597.1 | Symbols:  | unknown protein; LOCATED IN: endomembr...    48   3e-06

>AT3G25597.1 | Symbols:  | unknown protein; LOCATED IN: endomembrane
           system; BEST Arabidopsis thaliana protein match is:
           unknown protein (TAIR:AT1G26140.1); Has 35333 Blast hits
           to 34131 proteins in 2444 species: Archae - 798;
           Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
           531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
           BLink). | chr3:9306103-9306585 FORWARD LENGTH=160
          Length = 160

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 6/56 (10%)

Query: 90  CMEEVEKVMEEFYQNGEFAFGSFWGRKGPWGVPPIVNDHNCKNF-----AQYEILD 140
           C+EEVE+V+EEF +NGEF FGSFWG++       + N  N  NF     ++YEI++
Sbjct: 89  CIEEVEQVLEEFSKNGEFLFGSFWGQERVQNSSSMSNCGN-DNFDLRFVSRYEIIE 143