Miyakogusa Predicted Gene
- Lj0g3v0000719.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0000719.1 tr|Q84KB6|Q84KB6_RAPSA Fertility restorer
homologue OS=Raphanus sativus GN=Ppr-B PE=4
SV=1,25.71,4e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; SUBFAMI,CUFF.104.1
(645 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 392 e-109
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 6e-59
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 6e-54
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 209 6e-54
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 6e-53
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 6e-53
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 205 7e-53
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 3e-51
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 199 4e-51
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 3e-50
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 6e-50
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 193 3e-49
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 7e-49
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 7e-49
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 8e-49
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 3e-48
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 1e-47
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 3e-47
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 6e-47
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 8e-47
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 9e-47
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 184 2e-46
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 2e-46
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 184 2e-46
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 182 5e-46
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 9e-46
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 3e-45
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 180 3e-45
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 178 1e-44
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 5e-44
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 5e-44
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 5e-44
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 1e-43
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 4e-43
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 172 8e-43
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 1e-42
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 2e-42
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 7e-42
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 1e-41
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 3e-41
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 166 4e-41
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 6e-41
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 161 1e-39
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 158 1e-38
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 3e-38
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 5e-38
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 154 2e-37
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 153 3e-37
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 152 6e-37
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 8e-37
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 7e-36
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 143 3e-34
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 136 4e-32
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 1e-31
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 134 2e-31
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 133 3e-31
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 130 3e-30
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 4e-30
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 8e-30
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 8e-30
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 9e-30
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 129 9e-30
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 9e-30
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 3e-29
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 8e-29
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 1e-28
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 1e-28
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 3e-28
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 1e-27
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 120 3e-27
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 9e-27
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 117 3e-26
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 4e-26
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 4e-26
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 5e-26
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 115 8e-26
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 113 4e-25
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 112 6e-25
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 2e-23
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 4e-23
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 4e-23
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 4e-23
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 103 3e-22
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 8e-22
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 95 1e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 95 2e-19
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 2e-19
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 94 3e-19
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 91 3e-18
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 90 4e-18
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 6e-18
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 90 6e-18
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 88 2e-17
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 9e-17
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 83 5e-16
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 2e-15
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 79 9e-15
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 79 1e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 3e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 77 4e-14
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 77 5e-14
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 75 1e-13
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 75 2e-13
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 74 3e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 4e-13
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 5e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 73 5e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 73 6e-13
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 72 9e-13
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 71 2e-12
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 3e-12
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 70 3e-12
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 5e-12
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 70 5e-12
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 70 6e-12
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 70 6e-12
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 69 8e-12
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 69 1e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 69 1e-11
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 69 2e-11
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 67 5e-11
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 66 6e-11
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 6e-11
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 7e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 66 8e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 9e-11
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 65 2e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 64 4e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 63 6e-10
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 7e-10
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 62 8e-10
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 61 2e-09
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 60 4e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 60 5e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 59 1e-08
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 59 1e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 58 2e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 57 5e-08
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 55 1e-07
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 54 4e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 54 4e-07
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G32230.1 | Symbols: PRORP1 | proteinaceous RNase P 1 | chr2:1... 52 2e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 2e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 50 4e-06
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 50 4e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/586 (37%), Positives = 336/586 (57%), Gaps = 34/586 (5%)
Query: 48 PYLVSFKGVIKELCEKER-MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
P ++S+ V+ +R + A+ V +EM ++P+ TYN LI G C N+ A+
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
L+D+M +G PN TY +LID C +D +K+ M G P++ +YN I
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
R+++ + + M RG S D V+YN +I +C++G +AL + AE + G+ P +
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
TY++LI ++C G++ A + +M + P+ TYT L+ + G + A+ + EM
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
GF SPS+VT+NALI+G C ++++A+ +L M E GLSPD VSY+TVL
Sbjct: 407 NDNGF--------SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL----------------------S 383
GFC+ ++ +A +K EM EK I D TY SL++G
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL 443
DE TY++L+N Y +G+++K +L EM G LPD VT V INGLNK++ T AK +L
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 444 LRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSV 503
L++ + ++PS + Y TLIENCS +EFKS V L+K F +G++ EA E M +
Sbjct: 579 LKLFYEE--SVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGW 563
KPDG YN++I HCR G++ KAY +YKEMV GF H +V++L+ AL+ + K +E+
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNS 696
Query: 564 VIRNTLRSCNLNDSELHQVLNEIEVKKCKIDALLNALAKIAVDGML 609
VI + LRSC L+++E +VL EI ++ +D +L+ LA++A DG L
Sbjct: 697 VIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFL 742
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/486 (34%), Positives = 258/486 (53%), Gaps = 69/486 (14%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERM 66
++V N +I G+ CK +K+ + F LLR +EP L+S+ VI LC + RM
Sbjct: 239 NVVTYNTLIDGY-------CKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 67 EEAKEVVREMNRKG-----------------------------------LAPDCETYNAL 91
+E V+ EMNR+G L P TY +L
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 92 ICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGF 150
I MCK NM A+E DQMRVRGL PNERTY +L+D ++++AY+V EM +GF
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 151 LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE 210
PSV TYN I + + ++E A+ + M E+GLSPD+VSY+ V+S FC+ ++++AL
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 211 IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
+K E VEKGI PD +TYS+LIQ C Q EA DL+ EMLR + P TYT L+ AYC
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 271 LVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPE 330
+ G+ A LH+EM +G LPD +VT++ LI+GL R EA +L +
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPD--------VVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 331 MGLSPDAVSYNTVL-----FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM--EGLS 383
P V+Y+T++ F + L K + +K M E + +ES++
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEA-----DQVFESMLGKNHKP 638
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL 443
D Y+ +++ + G+++K + L +EM ++G+L +VT+ + L+K+ + ++
Sbjct: 639 DGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698
Query: 444 LRMISS 449
+ ++ S
Sbjct: 699 VHVLRS 704
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 188/419 (44%), Gaps = 46/419 (10%)
Query: 155 ATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE-LEKALEIKA 213
+ ++ + +Y +++AL I G P ++SYNAV+ + + A +
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK 194
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
E +E + P+ TY+ LI+ C G++ A LF +M P+ TY L+ YC +
Sbjct: 195 EMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLR 254
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
+ F L M +G P+L+++N +I+GLC R+ E +L M G
Sbjct: 255 KIDDGFKLLRSMALKG--------LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGY 306
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV-TYSSLL 392
S D V+YNT++ G+C+ +A + EM L GL+ V TY+SL+
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEM--------------LRHGLTPSVITYTSLI 352
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
+ GNM + + +M G P+ T ++G ++K + A +L M +
Sbjct: 353 HSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG-- 410
Query: 453 TMPSYIIYDTLIE-NCSYVEFKSAVGLVKDFSTRGL-------------------VNEAA 492
PS + Y+ LI +C + + A+ +++D +GL V+EA
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 493 IAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
M +KPD Y+ LI C + +A ++Y+EM+ G P F+ +LI+A
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 256/551 (46%), Gaps = 53/551 (9%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
LR P + +++ L ++ ++EEA +V+ + G++P+ YNALI +CK R
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFIT 162
A L+D+M GL PN+ TY LID+ C LD A EM+ +G SV YN I
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ + A G + M + L P +V+Y +++ +C G++ KAL + E KGI P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
T++ L+ L G + +A LF EM +V P+ TY ++ YC G+ S AF
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
EM +G +PD ++ LIHGLC + EA + G+ + + + Y
Sbjct: 566 KEMTEKGIVPD--------TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG--------------------- 381
+L GFC+ +L++A + EM ++ + LD Y L++G
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 382 -LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAK 440
D+V Y+S+++ G+ ++ F + M G +P+ VT INGL K + A+
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 441 GILLRMISSQCLTMPSYIIYDTLIENCS--------YVEFKSAV------------GLVK 480
+ +M ++P+ + Y ++ + VE +A+ L++
Sbjct: 738 VLCSKM--QPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIR 795
Query: 481 DFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
F +G + EA+ RM V PD Y +I + CRR +V KA E++ M G P
Sbjct: 796 GFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRP 855
Query: 541 HMFSVLSLIHA 551
+ +LIH
Sbjct: 856 DRVAYNTLIHG 866
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 153/581 (26%), Positives = 260/581 (44%), Gaps = 88/581 (15%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
+V + +I LC+K+++ EA + +++ K L PD TY L+ G+CKV+ +E+ D
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 110 QMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
+M SP+E SL++ L +++A + ++ G P++ YN I +
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
+ +A +F M + GL P+ V+Y+ +I FC+ G+L+ AL E V+ G+ Y+
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
+LI C G + A EM+ + P+ TYT LM YC G+ + A L+ EM +
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
G +PS+ TF L+ GL + +A+ + M E + P+ V+YN ++ G+C
Sbjct: 502 G--------IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS----------------------DEV 386
+ ++ KA+E EM EK I D Y+Y L+ GL +E+
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 387 TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
Y+ LL+ + +G +++ + +EM + G D V GV I+G K + G+L M
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEM 673
Query: 447 ISSQCLTMPSYIIYDTLIENCSYV-EFKSAVGL-------------------VKDFSTRG 486
P +IY ++I+ S +FK A G+ + G
Sbjct: 674 HDRG--LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 487 LVNEAAIAHERMHNMSVKP-----------------------------------DGAVYN 511
VNEA + +M +S P + A YN
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYN 791
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
+LI CR+G + +A E+ M+ G P + ++I+ L
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 248/544 (45%), Gaps = 64/544 (11%)
Query: 32 CKEKKVGET------FGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK +K E G + + P V++ +I C + +++ A + EM GL
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNE 144
YN+LI G CK ++ A +M + L P TY SL+ C+ ++KA ++++E
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHE 497
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M G PS+ T+ ++ + + A+ +F+ MAE + P+ V+YN +I +C++G+
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+ KA E E EKGI+PD +Y LI LCL G EA + +G+ + YT
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEAL-- 322
L++ +C G+ A + EM RG D LV + LI G SL+ D L
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLD--------LVCYGVLIDG--SLKHKDRKLFF 667
Query: 323 GILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL 382
G+L+ M + GL PD V Y +++ + + K+A+ + M + +E TY +++ GL
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 383 ----------------------SDEVTYSSLLNDYFAQG--NMQKVFKLEREMTRNGYLP 418
++VTY L D +G +MQK +L + + G L
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL-DILTKGEVDMQKAVELHNAILK-GLLA 785
Query: 419 DSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI-ENCSYVEFKSAVG 477
++ T + I G ++ A ++ RMI P I Y T+I E C + K A+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDG--VSPDCITYTTMINELCRRNDVKKAIE 843
Query: 478 LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYG 537
L + +G ++PD YN LI C G + KA E+ EM+ G
Sbjct: 844 LWNSMTEKG----------------IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 538 FFPH 541
P+
Sbjct: 888 LIPN 891
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 243/555 (43%), Gaps = 88/555 (15%)
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW- 134
+ + L P+ T +AL+ G+ K R+ A+EL++ M G+ P+ Y +I LC
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKD 242
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
L +A ++ M A+G ++ YN I ++V +A+GI +A + L PD+V+Y
Sbjct: 243 LSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCT 302
Query: 195 VISKFC-----------------------------------QDGELEKALEIKAETVEKG 219
++ C + G++E+AL + V+ G
Sbjct: 303 LVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFG 362
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
+ P+ Y+ALI +LC EA LF M + + P++ TY+ L+ +C G+ A
Sbjct: 363 VSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
EM G S+ +N+LI+G C + A G + M L P V+
Sbjct: 423 SFLGEMVDTG--------LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 340 YNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL----------------- 382
Y +++ G+C ++ KA L EM K I YT+ +L+ GL
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 383 -----SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTS 437
+ VTY+ ++ Y +G+M K F+ +EMT G +PD+ + I+GL S
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 438 IAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTR---------GL 487
AK + + C + I Y L+ C + + A+ + ++ R G+
Sbjct: 595 EAKVFVDGLHKGNCEL--NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 488 VNEAAIAH----------ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYG 537
+ + ++ H + MH+ +KPD +Y +I + G+ +A+ ++ M++ G
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 538 FFPHMFSVLSLIHAL 552
P+ + ++I+ L
Sbjct: 713 CVPNEVTYTAVINGL 727
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 204/459 (44%), Gaps = 47/459 (10%)
Query: 141 VFNEMIAS-GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
VF MI LP V T + + + A+ +F+ M G+ PD+ Y VI
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 200 CQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
C+ +L +A E+ A G + V Y+ LI LC + + EA + ++ D+ P
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVD 319
TY L+Y C V EF + + DEM ++FSPS ++L+ GL +++
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEM--------LCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 320 EALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
EAL +++ + + G+SP+ YN ++ C+ R+ +A EL + KI
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-ELLFDRMGKI------------ 396
Query: 380 EGL-SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
GL ++VTYS L++ + +G + EM G ING K S
Sbjct: 397 -GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISA 455
Query: 439 AKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRG----------- 486
A+G + MI+ + P+ + Y +L+ CS + A+ L + + +G
Sbjct: 456 AEGFMAEMINKK--LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTL 513
Query: 487 --------LVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
L+ +A M +VKP+ YN++I +C G+++KA+E KEM G
Sbjct: 514 LSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGI 573
Query: 539 FPHMFSVLSLIHALYYDRKNSEMGWVIRNTLR-SCNLND 576
P +S LIH L + SE + + +C LN+
Sbjct: 574 VPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNE 612
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/385 (29%), Positives = 182/385 (47%), Gaps = 36/385 (9%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P V++ +I+ CE+ M +A E ++EM KG+ PD +Y LI G+C A
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
D + NE Y L+ C L++A V EM+ G + Y I
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
L + + G+ M +RGL PD V Y ++I + G+ ++A I + +G +P++
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV-----GEFSM-- 277
VTY+A+I LC G + EA E+L + P +S ++ Y C + GE M
Sbjct: 718 VTYTAVINGLCKAGFVNEA-----EVLCSKMQPVSSVPNQVTYG-CFLDILTKGEVDMQK 771
Query: 278 AFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
A LH+ + +G L + T+N LI G C R++EA ++ M G+SPD
Sbjct: 772 AVELHNAIL-KGLLAN--------TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFA 397
++Y T++ C+ ++KKA EL M EK I D V Y++L++
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIR-------------PDRVAYNTLIHGCCV 869
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVT 422
G M K +L EM R G +P++ T
Sbjct: 870 AGEMGKATELRNEMLRQGLIPNNKT 894
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 134/255 (52%), Gaps = 11/255 (4%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEE 68
V ++++ G + + K++K+ FGLL+ ++P V + +I + +E
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKL--FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A + M +G P+ TY A+I G+CK + A L +M+ PN+ TY +D
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 129 LLCTWWLD--KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
+L +D KA ++ N I G L + ATYN I + R+E+A + + M G+S
Sbjct: 761 ILTKGEVDMQKAVELHNA-ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVS 819
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
PD ++Y +I++ C+ +++KA+E+ EKGI PD V Y+ LI C+ G + +A +L
Sbjct: 820 PDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Query: 247 FLEMLRGDVSPSNST 261
EMLR + P+N T
Sbjct: 880 RNEMLRQGLIPNNKT 894
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 259/564 (45%), Gaps = 77/564 (13%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
+ S+ VI +C+ R++EA ++ M KG PD +Y+ ++ G C+ + +L +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
M+ +GL PN Y S+I LLC L +A + F+EMI G LP Y I +
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
+ A F M R ++PD+++Y A+IS FCQ G++ +A ++ E KG+ PD VT++
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
LI C G + +AF + M++ SP+ TYT L+ C G+ A L EM
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM--- 482
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
+ I P++ T+N++++GLC ++EA+ ++ GL+ D V+Y T++ +C
Sbjct: 483 -----WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE-VTYSSLLNDYFAQGNMQKVFKL 407
+ E+ KA E+ EM L +GL VT++ L+N + G ++ KL
Sbjct: 538 KSGEMDKAQEILKEM--------------LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENC 467
M G P++ T N L K+ Y I + L
Sbjct: 584 LNWMLAKGIAPNATTF----NSLVKQ-----------------------YCIRNNL---- 612
Query: 468 SYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAY 527
K+A + KD +RG V PDG Y L+ HC+ N+ +A+
Sbjct: 613 -----KAATAIYKDMCSRG----------------VGPDGKTYENLVKGHCKARNMKEAW 651
Query: 528 EMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVLNEIE 587
+++EM GF + + LI +K E V R D E+ ++ +
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Query: 588 VKKCKIDALLNALAKIAVDGMLLD 611
K + D +++ + +I ++ L+D
Sbjct: 712 YKGKRPDTIVDPIDEI-IENYLVD 734
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 201/402 (50%), Gaps = 22/402 (5%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P + +I LC ++ EA+E EM R+G+ PD Y LI G CK ++ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+ + +M R ++P+ TY ++I C + +A K+F+EM G P T+ + I Y
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ ++ A + + M + G SP++V+Y +I C++G+L+ A E+ E + G+ P+
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
TY++++ LC G++ EA L E ++ TYT LM AYC GE A + E
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M +G P++VTFN L++G C +++ +L M G++P+A ++N+++
Sbjct: 552 MLGKG--------LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
+C LK A + +M + + D TYE+L++G + NM++
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG-------------HCKARNMKEA 650
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
+ L +EM G+ T V I G K+ A+ + +M
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 168/332 (50%), Gaps = 9/332 (2%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P ++++ +I C+ M EA ++ EM KGL PD T+ LI G CK +M A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+++ M G SPN TY +LID LC LD A ++ +EM G P++ TYN +
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S +E+A+ + GL+ D V+Y ++ +C+ GE++KA EI E + KG+ P
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VT++ L+ CL G L + L ML ++P+ +T+ L+ YC+ A ++ +
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M RG PD T+ L+ G C + EA + + M G S +Y+ ++
Sbjct: 622 MCSRGVGPDG--------KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
GF + ++ +A E+ +M + + D+ ++
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 154/564 (27%), Positives = 259/564 (45%), Gaps = 77/564 (13%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
+ S+ VI +C+ R++EA ++ M KG PD +Y+ ++ G C+ + +L +
Sbjct: 246 VASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIE 305
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
M+ +GL PN Y S+I LLC L +A + F+EMI G LP Y I +
Sbjct: 306 VMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
+ A F M R ++PD+++Y A+IS FCQ G++ +A ++ E KG+ PD VT++
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
LI C G + +AF + M++ SP+ TYT L+ C G+ A L EM
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM--- 482
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
+ I P++ T+N++++GLC ++EA+ ++ GL+ D V+Y T++ +C
Sbjct: 483 -----WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE-VTYSSLLNDYFAQGNMQKVFKL 407
+ E+ KA E+ EM L +GL VT++ L+N + G ++ KL
Sbjct: 538 KSGEMDKAQEILKEM--------------LGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENC 467
M G P++ T N L K+ Y I + L
Sbjct: 584 LNWMLAKGIAPNATTF----NSLVKQ-----------------------YCIRNNL---- 612
Query: 468 SYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAY 527
K+A + KD +RG V PDG Y L+ HC+ N+ +A+
Sbjct: 613 -----KAATAIYKDMCSRG----------------VGPDGKTYENLVKGHCKARNMKEAW 651
Query: 528 EMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVLNEIE 587
+++EM GF + + LI +K E V R D E+ ++ +
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Query: 588 VKKCKIDALLNALAKIAVDGMLLD 611
K + D +++ + +I ++ L+D
Sbjct: 712 YKGKRPDTIVDPIDEI-IENYLVD 734
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 201/402 (50%), Gaps = 22/402 (5%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P + +I LC ++ EA+E EM R+G+ PD Y LI G CK ++ A
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAAS 371
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+ + +M R ++P+ TY ++I C + +A K+F+EM G P T+ + I Y
Sbjct: 372 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ ++ A + + M + G SP++V+Y +I C++G+L+ A E+ E + G+ P+
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
TY++++ LC G++ EA L E ++ TYT LM AYC GE A + E
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M +G P++VTFN L++G C +++ +L M G++P+A ++N+++
Sbjct: 552 MLGKG--------LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
+C LK A + +M + + D TYE+L++G + NM++
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG-------------HCKARNMKEA 650
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
+ L +EM G+ T V I G K+ A+ + +M
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/332 (29%), Positives = 168/332 (50%), Gaps = 9/332 (2%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P ++++ +I C+ M EA ++ EM KGL PD T+ LI G CK +M A
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+++ M G SPN TY +LID LC LD A ++ +EM G P++ TYN +
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S +E+A+ + GL+ D V+Y ++ +C+ GE++KA EI E + KG+ P
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 561
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VT++ L+ CL G L + L ML ++P+ +T+ L+ YC+ A ++ +
Sbjct: 562 VTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKD 621
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M RG PD T+ L+ G C + EA + + M G S +Y+ ++
Sbjct: 622 MCSRGVGPDG--------KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
GF + ++ +A E+ +M + + D+ ++
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 254/540 (47%), Gaps = 53/540 (9%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + ++ ++ C+ +EEA + V ++ GL PD TY +LI G C+ +++ A ++
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+++M ++G NE Y LI LC +D+A +F +M P+V TY I +
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
SER +AL + M E G+ P++ +Y +I C + EKA E+ + +EKG++P+ +T
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y+ALI C +G + +A D+ M +SP+ TY L+ YC A + ++M
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKML 454
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
R LPD +VT+N+LI G C D A +L M + GL PD +Y +++
Sbjct: 455 ERKVLPD--------VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDS 506
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG----------------------LSD 384
C+ + +++A +L +++K + + Y +L++G L +
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 385 EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILL 444
+T+++L++ A G +++ LE +M + G P T + I+ L K A
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 445 RMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVK 504
+M+SS T P Y T I+ + G + +A +M V
Sbjct: 627 QMLSSG--TKPDAHTYTTFIQT---------------YCREGRLLDAEDMMAKMRENGVS 669
Query: 505 PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL----YYDRKNSE 560
PD Y+ LI + G N A+++ K M G P + LSLI L Y +K SE
Sbjct: 670 PDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSE 729
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 153/532 (28%), Positives = 250/532 (46%), Gaps = 39/532 (7%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + ++ +IK LC ER EA +V+EM G+ P+ TY LI +C A EL
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
QM +GL PN TY +LI+ C ++ A V M + P+ TYN+ I Y
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
S V +A+G+ + M ER + PD+V+YN++I C+ G + A + + ++G++PD T
Sbjct: 441 S-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y+++I +LC + EA DLF + + V+P+ YT L+ YC G+ A + ++M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
+ LP+ +TFNALIHGLC+ ++ EA + M ++GL P VS +T+L
Sbjct: 560 SKNCLPNS--------LTFNALIHGLCADGKLKEATLLEEKMVKIGLQP-TVSTDTIL-- 608
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-----DEVTYSSLLNDYFAQGNM 401
I L K + ++ Y + LS D TY++ + Y +G +
Sbjct: 609 ---IHRLLKDGDF------------DHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
+ +M NG PD T I G T+ A +L RM + C PS +
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGC--EPSQHTFL 711
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM---SVKPDGAVYNLLIFDHC 518
+LI++ +++ G + + E E + M SV P+ Y LI C
Sbjct: 712 SLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC 771
Query: 519 RRGNVNKAYEMYKEMV-HYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTL 569
GN+ A +++ M + G P +L+ +K++E V+ + +
Sbjct: 772 EVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMI 823
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 157/562 (27%), Positives = 249/562 (44%), Gaps = 42/562 (7%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C ++ E L++ ++P + ++ +I LC + + E+A+E++ +M KGL P+
Sbjct: 334 CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEM 145
TYNALI G CK + AV++ + M R LSPN RTY LI C + KA V N+M
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKM 453
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGEL 205
+ LP V TYN I S + A + S M +RGL PD +Y ++I C+ +
Sbjct: 454 LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRV 513
Query: 206 EKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRL 265
E+A ++ +KG+ P+ V Y+ALI C G + EA + +ML + P++ T+ L
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 266 MYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL 325
++ C G+ A L ++M I P++ T LIH L D A
Sbjct: 574 IHGLCADGKLKEATLLEEKM--------VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 326 RGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE 385
+ M G PDA +Y T + +C+ L A ++ +M E + D +TY SL++G D
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGD- 684
Query: 386 VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR 445
Q N F + + M G P T I L + KG
Sbjct: 685 ----------LGQTNF--AFDVLKRMRDTGCEPSQHTFLSLIKHL-LEMKYGKQKG---- 727
Query: 446 MISSQCLTMPSYIIYDT-------LIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERM 498
+ M + + +DT ++E+ KS L+ G + A + M
Sbjct: 728 -SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 499 H-NMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
N + P V+N L+ C+ N+A ++ +M+ G P + S LI L Y +
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL-YKKG 845
Query: 558 NSEMGWVIRNTLRSCNLNDSEL 579
E G + L C + EL
Sbjct: 846 EKERGTSVFQNLLQCGYYEDEL 867
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 244/543 (44%), Gaps = 47/543 (8%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
++E K+V EM + P+ TYN ++ G CK+ N+ A + ++ GL P+ TY S
Sbjct: 199 VDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTS 258
Query: 126 LIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
LI C LD A+KVFNEM G + Y I + R+++A+ +F M +
Sbjct: 259 LIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDE 318
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
P + +Y +I C +AL + E E GI P+ TY+ LI +LC Q +A
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+L +ML + P+ TY L+ YC G A + + M R + SP+ T
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR--------KLSPNTRT 430
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+N LI G C V +A+G+L M E + PD V+YN+++ G C+ AY L M+
Sbjct: 431 YNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 365 EKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
++ + D++TY S+++ L +++ L + + G P+ V
Sbjct: 490 DRGLVPDQWTYTSMIDSLC-------------KSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSA-------- 475
I+G K A +L +M+S CL P+ + ++ LI C+ + K A
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCL--PNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Query: 476 -VGLVKDFST----------RGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVN 524
+GL ST G + A ++M + KPD Y I +CR G +
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 525 KAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVLN 584
A +M +M G P +F+ SLI Y D + + + +R S+ H L+
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKG-YGDLGQTNFAFDVLKRMRDTGCEPSQ-HTFLS 712
Query: 585 EIE 587
I+
Sbjct: 713 LIK 715
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 211/455 (46%), Gaps = 47/455 (10%)
Query: 123 YMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMA 181
Y +L++ L + L D+ +V+ EM+ P++ TYNK + Y VE+A S +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 182 ERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLP 241
E GL PD +Y ++I +CQ +L+ A ++ E KG ++V Y+ LI LC+ +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 242 EAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
EA DLF++M + P+ TYT L+ + C S A +L EM G P+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG--------IKPN 357
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
+ T+ LI LCS + ++A +L M E GL P+ ++YN ++ G+C+ ++ A ++
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Query: 362 EMDEKIIWLDEYTYESLMEG---------------------LSDEVTYSSLLNDYFAQGN 400
M+ + + + TY L++G L D VTY+SL++ GN
Sbjct: 418 LMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIY 460
++L M G +PD T I+ L K A + + Q P+ ++Y
Sbjct: 478 FDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL--EQKGVNPNVVMY 535
Query: 461 DTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRR 520
LI+ + G V+EA + E+M + + P+ +N LI C
Sbjct: 536 TALIDG---------------YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580
Query: 521 GNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
G + +A + ++MV G P + + LIH L D
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 196/427 (45%), Gaps = 44/427 (10%)
Query: 154 VATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKA 213
+ YN + + V++ ++ M E + P++ +YN +++ +C+ G +E+A + +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
+ VE G+ PD TY++LI C + L AF +F EM + YT L++ C+
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
A L +M+ + P++ T+ LI LC ER EAL +++ M E G+
Sbjct: 303 RIDEAMDLFVKMKDD--------ECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI 354
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLN 393
P+ +Y ++ C + +KA EL +M EK + + + +TY++L+N
Sbjct: 355 KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL-------------MPNVITYNALIN 401
Query: 394 DYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
Y +G ++ + M P++ T I G K+ A G+L +M+ + L
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVL- 459
Query: 454 MPSYIIYDTLIE-NCSYVEFKSAVGLVKDFSTRGL-------------------VNEAAI 493
P + Y++LI+ C F SA L+ + RGL V EA
Sbjct: 460 -PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 494 AHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALY 553
+ + V P+ +Y LI +C+ G V++A+ M ++M+ P+ + +LIH L
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 554 YDRKNSE 560
D K E
Sbjct: 579 ADGKLKE 585
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 192/424 (45%), Gaps = 47/424 (11%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK K+V E L + P +V + +I C+ +++EA ++ +M K P+
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNS 567
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNE 144
T+NALI G+C + A L ++M GL P T LI LL D AY F +
Sbjct: 568 LTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQ 627
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M++SG P TY FI Y R+ A + + M E G+SPDL +Y+++I + G+
Sbjct: 628 MLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALC------LQGSLPE--------AFDLFLE- 249
A ++ + G P T+ +LI+ L +GS PE FD +E
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVEL 747
Query: 250 ---MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM-RHRGFLPDFVIQFSPSLVTF 305
M+ V+P+ +Y +L+ C VG +A + D M R+ G SPS + F
Sbjct: 748 LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGI--------SPSELVF 799
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
NAL+ C L++ +EA ++ M +G P S ++ G + E ++ + + +
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859
Query: 366 KIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGV 425
+ DE ++ +++G+ QG ++ ++L M +NG S T +
Sbjct: 860 CGYYEDELAWKIIIDGVG-------------KQGLVEAFYELFNVMEKNGCKFSSQTYSL 906
Query: 426 FING 429
I G
Sbjct: 907 LIEG 910
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 145/515 (28%), Positives = 234/515 (45%), Gaps = 40/515 (7%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L EP +V+ ++ C R+ +A +V +M G PD T+N LI G+ +
Sbjct: 145 LGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASE 204
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFIT 162
AV L D+M V+G P+ TY +++ LC +D A + +M P V YN I
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
A + + V AL +F+ M +G+ P++V+YN++I C G A + ++ +E+ I P
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ VT+SALI A +G L EA L+ EM++ + P TY+ L+ +C+ A H+
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
+ M + P+ +VT+N LI G C +RVDE + + R M + GL + V+Y T
Sbjct: 385 ELMISKDCFPN--------VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ GF Q RE A + +M + D TY L++GL + G ++
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN-------------NGKVE 483
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
+ + R+ PD T + I G+ K + G L S P+ + Y T
Sbjct: 484 TALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG--KVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 463 LIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
++ F +GL EA M PD YN LI H R G+
Sbjct: 542 MMSG---------------FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 523 VNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
+ E+ +EM F S + L+ + +D +
Sbjct: 587 KAASAELIREMRSCRFVGDA-STIGLVTNMLHDGR 620
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 145/541 (26%), Positives = 246/541 (45%), Gaps = 48/541 (8%)
Query: 37 VGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMC 96
+GE L + L ++ +I C + ++ A V+ +M + G PD T N+L+ G C
Sbjct: 103 LGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFC 162
Query: 97 KVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVA 155
+ AV L QM G P+ T+ +LI L +A + + M+ G P +
Sbjct: 163 HGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLV 222
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
TY + ++ AL + M + + P +V YN +I C + AL + E
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
KGI P+ VTY++LI+ LC G +A L +M+ ++P+ T++ L+ A+ G+
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
A L+DEM R PD + T+++LI+G C +R+DEA + M P
Sbjct: 343 VEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
+ V+YNT++ GFC+ + + + EL EM ++ + + + VTY++L++ +
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL-------------VGNTVTYTTLIHGF 441
Query: 396 FAQ---GNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
F N Q VFK +M +G LPD +T + ++GL A + + S+
Sbjct: 442 FQARECDNAQIVFK---QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK-- 496
Query: 453 TMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
P Y+ +IE C + + L S +G VKP+ Y
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG----------------VKPNVVTYT 540
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRS 571
++ CR+G +A +++EM G P + +LI A D + +IR +RS
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE-MRS 599
Query: 572 C 572
C
Sbjct: 600 C 600
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 130/542 (23%), Positives = 241/542 (44%), Gaps = 48/542 (8%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
++++A + +M + P ++ L+ + K+ + L +QM+ G+S N TY
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 125 SLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
LI+ C L A V +M+ G+ P + T N + + R+ A+ + M E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
G PD ++N +I + +A+ + V KG PD VTY ++ LC +G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
L +M +G + P Y ++ A C + A +L EM ++G P++V
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKG--------IRPNVV 292
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
T+N+LI LC+ R +A +L M E ++P+ V+++ ++ F + +L +A +L EM
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 364 DEKIIWLDEYTYESLMEGLS-----DE-----------------VTYSSLLNDYFAQGNM 401
++ I D +TY SL+ G DE VTY++L+ + +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
+ +L REM++ G + ++VT I+G + A+ + +M+S L P + Y
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL--PDIMTYS 470
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
L++ GL + G V A + E + ++PD YN++I C+ G
Sbjct: 471 ILLD-----------GLCNN----GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 522 NVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQ 581
V ++++ + G P++ + +++ E + R L DS +
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYN 575
Query: 582 VL 583
L
Sbjct: 576 TL 577
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 140/282 (49%), Gaps = 2/282 (0%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEV 72
++V + +I F E + EK E ++P + ++ +I C +R++EAK +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHM 383
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLC 131
M K P+ TYN LI G CK + + +EL+ +M RGL N TY +LI
Sbjct: 384 FELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 443
Query: 132 TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
D A VF +M++ G LP + TY+ + ++ +VE AL +F + + PD+ +
Sbjct: 444 ARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYT 503
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN +I C+ G++E ++ KG+ P+ VTY+ ++ C +G EA LF EM
Sbjct: 504 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
P + TY L+ A+ G+ + + L EMR F+ D
Sbjct: 564 EEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 605
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 115/476 (24%), Positives = 191/476 (40%), Gaps = 72/476 (15%)
Query: 157 YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
Y K L+ +++ A+ +F M + P +V ++ ++S + + + + + +
Sbjct: 49 YRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
GI + TYS LI C + L A + +M++ P T L+ +C S
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 277 MAFHLHDEMRHRGFLPD---------------------------FVIQFSPSLVTFNALI 309
A L +M G+ PD V P LVT+ ++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
+GLC +D AL +L+ M + + P V YNT++ C + + A L EMD K I
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 370 LDEYTYESLMEGL------SDE----------------VTYSSLLNDYFAQGNMQKVFKL 407
+ TY SL+ L SD VT+S+L++ + +G + + KL
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN- 466
EM + PD T ING AK + MIS C P+ + Y+TLI+
Sbjct: 349 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYNTLIKGF 406
Query: 467 CSYVEFKSAVGLVKDFSTRGLV-------------------NEAAIAHERMHNMSVKPDG 507
C + L ++ S RGLV + A I ++M + V PD
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 508 AVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGW 563
Y++L+ C G V A +++ + P +++ +I + K E GW
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK-VEDGW 521
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 151/576 (26%), Positives = 271/576 (47%), Gaps = 50/576 (8%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P + +F +IK LC ++ A ++ +M GL PD +T+ ++ G + ++ A+
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMI-ASGFLPSVATYNKFITA 163
+ +QM G S + + ++ C ++ A EM GF P T+N +
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ V+ A+ I M + G PD+ +YN+VIS C+ GE+++A+E+ + + + P+
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
VTY+ LI LC + + EA +L + + P T+ L+ CL +A L +
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
EMR +G PD +F T+N LI LCS ++DEAL +L+ M G + ++YNT+
Sbjct: 425 EMRSKGCEPD---EF-----TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL--------------------- 382
+ GFC+ + ++A E+ EM+ + + TY +L++GL
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 383 -SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG 441
D+ TY+SLL + G+++K + + MT NG PD VT G I+GL K +A
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 442 ILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM 501
LLR I + + + + Y+ +I+ GL + T +N + E +
Sbjct: 597 -LLRSIQMKGINLTPH-AYNPVIQ-----------GLFRKRKTTEAIN---LFREMLEQN 640
Query: 502 SVKPDGAVYNLLIFDHCRRGN-VNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSE 560
PD Y ++ C G + +A + E++ GF P S+ L L
Sbjct: 641 EAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEET 700
Query: 561 MGWVIRNTLRSCNLNDSELHQVLNEIEVKKCKIDAL 596
+ ++ ++ ++ E+ V ++++K + DAL
Sbjct: 701 LVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQ-DAL 735
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 200/406 (49%), Gaps = 35/406 (8%)
Query: 12 RHMVR-MNVMIRG------FATESVMS--CKEKKVGETFGLLRM------EPYLVSFKGV 56
+H + M+VM++ + SV+S CK +V E +L P V++ +
Sbjct: 312 KHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTL 371
Query: 57 IKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGL 116
I LC++ ++EEA E+ R + KG+ PD T+N+LI G+C RN A+EL+++MR +G
Sbjct: 372 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGC 431
Query: 117 SPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
P+E TY LID LC+ LD+A + +M SG SV TYN I + + + +A
Sbjct: 432 EPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEE 491
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
IF M G+S + V+YN +I C+ +E A ++ + + +G PD TY++L+ C
Sbjct: 492 IFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC 551
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
G + +A D+ M P TY L+ C G +A L ++ +G
Sbjct: 552 RGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG------ 605
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG-LSPDAVSYNTVLFGFCQ----I 350
I +P +N +I GL + EA+ + R M E PDAVSY V G C I
Sbjct: 606 INLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 351 RELKKAYELKVEMDEKIIWLDEYTYESLMEG---LSDEVTYSSLLN 393
RE A + VE+ EK + + L EG LS E T L+N
Sbjct: 664 RE---AVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVN 706
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 198/425 (46%), Gaps = 37/425 (8%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR-------MEPYLVSFKGVIKELCEKERME 67
V +NV++ GF CKE +V + ++ P +F ++ LC+ ++
Sbjct: 260 VSVNVIVHGF-------CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVK 312
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
A E++ M ++G PD TYN++I G+CK+ + AVE+ DQM R SPN TY +LI
Sbjct: 313 HAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLI 372
Query: 128 DLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
LC +++A ++ + + G LP V T+N I + A+ +F M +G
Sbjct: 373 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCE 432
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
PD +YN +I C G+L++AL + + G +TY+ LI C EA ++
Sbjct: 433 PDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
F EM VS ++ TY L+ C A L D+M G PD T+N
Sbjct: 493 FDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD--------KYTYN 544
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
+L+ C + +A I++ M G PD V+Y T++ G C+ ++ A +L + K
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 367 IIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM-TRNGYLPDSVTLGV 425
I L + Y +++GL F + + L REM +N PD+V+ +
Sbjct: 605 GINLTPHAYNPVIQGL-------------FRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 426 FINGL 430
GL
Sbjct: 652 VFRGL 656
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 213/466 (45%), Gaps = 57/466 (12%)
Query: 115 GLSPNERTYMSLIDLLCTWWLDKAYKVFN-EMIASGFLPSVATYNKFITAYLSSERVEQA 173
GL P+ Y +++LL K ++ + +M G P V+T+N I A + ++ A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA 233
+ + M GL PD ++ V+ + ++G+L+ AL I+ + VE G +V+ + ++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 234 LCLQGSLPEAFDLFLEMLRGD-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
C +G + +A + EM D P T+ L+ C G A + D M G+ P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 293 DFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
D + T+N++I GLC L V EA+ +L M SP+ V+YNT++ C+ +
Sbjct: 329 D--------VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 353 LKKAYELKVEMDEKIIWLDEYTYESLMEGL----------------------SDEVTYSS 390
+++A EL + K I D T+ SL++GL DE TY+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 391 LLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM---- 446
L++ ++G + + + ++M +G +T I+G K T A+ I M
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 447 ISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
+S +T Y+TLI+ GL K S R V +AA ++M KPD
Sbjct: 501 VSRNSVT------YNTLID-----------GLCK--SRR--VEDAAQLMDQMIMEGQKPD 539
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
YN L+ CR G++ KA ++ + M G P + + +LI L
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL 585
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 233/510 (45%), Gaps = 41/510 (8%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F +I+ + ++ EA E + KG + NALI + ++ + A +Y ++
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 113 VRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
G+ N T +++ LC ++K +++ G P + TYN I+AY S +E
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLME 287
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
+A + +AM +G SP + +YN VI+ C+ G+ E+A E+ AE + G+ PD TY +L+
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
C +G + E +F +M DV P ++ +M + G A + ++ G +
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
PD VI + LI G C + A+ + M + G + D V+YNT+L G C+ +
Sbjct: 408 PDNVI--------YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
L +A +L EM E+ ++ D YT L++G + GN+Q +L ++M
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDG-------------HCKLGNLQNAMELFQKM 506
Query: 412 TRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP-SYIIYDTLIENCSYV 470
D VT ++G K AK I M+S + L P SY I
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI----------- 555
Query: 471 EFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMY 530
LV ++G + EA + M + ++KP + N +I +CR GN +
Sbjct: 556 -------LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFL 608
Query: 531 KEMVHYGFFPHMFSVLSLIHALYYDRKNSE 560
++M+ GF P S +LI+ + S+
Sbjct: 609 EKMISEGFVPDCISYNTLIYGFVREENMSK 638
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/553 (27%), Positives = 256/553 (46%), Gaps = 55/553 (9%)
Query: 29 VMSCKEKKVGETFGLLRMEPYLVSF---KGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
V + K ++ E F LLR + + VS +I L +E A V +E++R G+ +
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNE 144
T N ++ +CK M Q++ +G+ P+ TY +LI + L ++A+++ N
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNA 295
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M GF P V TYN I + E+A +F+ M GLSPD +Y +++ + C+ G+
Sbjct: 296 MPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGD 355
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+ + ++ ++ + ++PD V +S+++ G+L +A F + + P N YT
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ YC G S+A +L +EM +G D +VT+N ++HGLC + + EA +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMD--------VVTYNTILHGLCKRKMLGEADKL 467
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG--- 381
M E L PD+ + ++ G C++ L+ A EL +M EK I LD TY +L++G
Sbjct: 468 FNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGK 527
Query: 382 -------------------LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
L ++YS L+N ++G++ + F++ EM P +
Sbjct: 528 VGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMI 587
Query: 423 LGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKS-AVGLVKD 481
I G + S + L +MIS + P I Y+TLI E S A GLVK
Sbjct: 588 CNSMIKGYCRSGNASDGESFLEKMISEGFV--PDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 482 FSTR--GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFF 539
GLV PD YN ++ CR+ + +A + ++M+ G
Sbjct: 646 MEEEQGGLV----------------PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN 689
Query: 540 PHMFSVLSLIHAL 552
P + +I+
Sbjct: 690 PDRSTYTCMINGF 702
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 136/528 (25%), Positives = 242/528 (45%), Gaps = 44/528 (8%)
Query: 17 MNVMIRGFATESVMSCKEKKVGETFGLLRME---PYLVSFKGVIKELCEKERMEEAKEVV 73
+N+M+ + M +KVG ++ + P +V++ +I K MEEA E++
Sbjct: 238 LNIMVNALCKDGKM----EKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 74 REMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW 133
M KG +P TYN +I G+CK A E++ +M GLSP+ TY SL+ C
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 134 W-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
+ + KVF++M + +P + ++ ++ + S +++AL F+++ E GL PD V Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
+I +C+ G + A+ ++ E +++G D VTY+ ++ LC + L EA LF EM
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
+ P + T T L+ +C +G A L +M+ + D +VT+N L+ G
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD--------VVTYNTLLDGF 525
Query: 313 CSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDE 372
+ +D A I M + P +SY+ ++ C L +A+ + EM K I
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 373 YTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNK 432
S+++G Y GN +M G++PD ++ I G +
Sbjct: 586 MICNSMIKG-------------YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR 632
Query: 433 KATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAA 492
+ S A G++ +M Q +P Y++++ F + + EA
Sbjct: 633 EENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHG---------------FCRQNQMKEAE 677
Query: 493 IAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
+ +M V PD + Y +I + N+ +A+ ++ EM+ GF P
Sbjct: 678 VVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 200/398 (50%), Gaps = 30/398 (7%)
Query: 31 SCKEKKVGET---FGLLRME---PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPD 84
+CK+ V ET F +R P LV F ++ +++A + GL PD
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 85 CETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFN 143
Y LI G C+ + A+ L ++M +G + + TY +++ LC L +A K+FN
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFN 469
Query: 144 EMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
EM P T I + ++ A+ +F M E+ + D+V+YN ++ F + G
Sbjct: 470 EMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Query: 204 ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYT 263
+++ A EI A+ V K ILP ++YS L+ ALC +G L EAF ++ EM+ ++ P+
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 264 RLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALG 323
++ YC G S ++M GF+PD +++N LI+G E + +A G
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPD--------CISYNTLIYGFVREENMSKAFG 641
Query: 324 ILRGMPEM--GLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG 381
+++ M E GL PD +YN++L GFC+ ++K+A + +M E+ +
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVN------------ 689
Query: 382 LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
D TY+ ++N + +Q N+ + F++ EM + G+ PD
Sbjct: 690 -PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 169/379 (44%), Gaps = 38/379 (10%)
Query: 155 ATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
+ ++ I Y+ + ++ +A F+ + +G + + + NA+I + G +E A + E
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
G+ + T + ++ ALC G + + ++ V P TY L+ AY G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 275 FSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS 334
AF L + M +G FSP + T+N +I+GLC + + A + M GLS
Sbjct: 286 MEEAFELMNAMPGKG--------FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLS 337
Query: 335 PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLND 394
PD+ +Y ++L C+ ++ + ++ +M + + + D V +SS+++
Sbjct: 338 PDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV-------------VPDLVCFSSMMSL 384
Query: 395 YFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTM 454
+ GN+ K + G +PD+V + I G +K S+A + M+ C
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAM- 443
Query: 455 PSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
+ Y+T++ GL K R ++ EA M ++ PD +LI
Sbjct: 444 -DVVTYNTILH-----------GLCK----RKMLGEADKLFNEMTERALFPDSYTLTILI 487
Query: 515 FDHCRRGNVNKAYEMYKEM 533
HC+ GN+ A E++++M
Sbjct: 488 DGHCKLGNLQNAMELFQKM 506
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 44/272 (16%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK K +GE L + P + +I C+ ++ A E+ ++M K + D
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNE 144
TYN L+ G KV ++ A E++ M + + P +Y L++ LC+ L +A++V++E
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 145 MIAS-----------------------------------GFLPSVATYNKFITAYLSSER 169
MI+ GF+P +YN I ++ E
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 170 VEQALGIFSAMAER--GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
+ +A G+ M E GL PD+ +YN+++ FC+ ++++A + + +E+G+ PD TY
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
+ +I Q +L EAF + EML+ SP +
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR-ME-------PYLVSFKGVIKELCEKERM 66
+ N +I GF E MS + FGL++ ME P + ++ ++ C + +M
Sbjct: 621 ISYNTLIYGFVREENMS-------KAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
+EA+ V+R+M +G+ PD TY +I G N+ A ++D+M RG SP+++
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDDK 728
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 144/521 (27%), Positives = 242/521 (46%), Gaps = 42/521 (8%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
+I C + ++ A V+ +M + G P+ T ++L+ G C + + AV L DQM V G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 116 LSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
PN T+ +LI L +A + + M+A G P + TY + + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
+ + M + L P ++ YN +I C+ ++ AL + E KGI P+ VTYS+LI L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 235 CLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDF 294
C G +A L +M+ ++P T++ L+ A+ G+ A L+DEM R
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR------ 355
Query: 295 VIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELK 354
PS+VT+++LI+G C +R+DEA + M PD V+YNT++ GFC+ + ++
Sbjct: 356 --SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 355 KAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
+ E+ EM ++ + + TY L++GL F G+ ++ +EM +
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGL-------------FQAGDCDMAQEIFKEMVSD 460
Query: 415 GYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFK 473
G P+ +T ++GL K A + + S+ P+ Y+ +IE C + +
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK--MEPTIYTYNIMIEGMCKAGKVE 518
Query: 474 SAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
L + S +G VKPD YN +I CR+G+ +A ++KEM
Sbjct: 519 DGWDLFCNLSLKG----------------VKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 534 VHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNL 574
G P+ +LI A D +I+ +RSC
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKE-MRSCGF 602
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 231/515 (44%), Gaps = 40/515 (7%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L EP +V+ ++ C +R+ EA +V +M G P+ T+N LI G+
Sbjct: 145 LGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFIT 162
A+ L D+M +G P+ TY +++ LC D A+ + N+M P V YN I
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ ++ AL +F M +G+ P++V+Y+++IS C G A + ++ +E+ I P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
D T+SALI A +G L EA L+ EM++ + PS TY+ L+ +C+ A +
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
+ M + PD +VT+N LI G C +RV+E + + R M + GL + V+YN
Sbjct: 385 EFMVSKHCFPD--------VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ G Q + A E+ EM + + TY +L++GL G ++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC-------------KNGKLE 483
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
K + + R+ P T + I G+ K + G L S P + Y+T
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG--KVEDGWDLFCNLSLKGVKPDVVAYNT 541
Query: 463 LIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
+I F +G EA + M P+ YN LI R G+
Sbjct: 542 MISG---------------FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGD 586
Query: 523 VNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
+ E+ KEM GF S + L+ + +D +
Sbjct: 587 REASAELIKEMRSCGFAGDA-STIGLVTNMLHDGR 620
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 203/407 (49%), Gaps = 28/407 (6%)
Query: 32 CKEKKVGETFGLL------RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK F LL ++EP ++ + +I LC+ + M++A + +EM KG+ P+
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNE 144
TY++LI +C A L M R ++P+ T+ +LID L +A K+++E
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M+ PS+ TY+ I + +R+++A +F M + PD+V+YN +I FC+
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+E+ +E+ E ++G++ + VTY+ LIQ L G A ++F EM+ V P+ TY
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ C G+ A + + ++ + P++ T+N +I G+C +V++ +
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRS--------KMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD 384
+ G+ PD V+YNT++ GFC+ ++A L EM E L +
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-------------GTLPN 570
Query: 385 EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
Y++L+ G+ + +L +EM G+ D+ T+G+ N L+
Sbjct: 571 SGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 617
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 183/438 (41%), Gaps = 68/438 (15%)
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
LS +++ A+ +F M + P ++ ++ ++S + + + + + + GI +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
TYS LI C + LP A + +M++ P+ T + L+ YC S A L D+
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 285 MRHRGFLPDFVI---------------------------QFSPSLVTFNALIHGLCSLER 317
M G+ P+ V P LVT+ +++GLC
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
D A +L M + L P + YNT++ G C+ + + A L EM+ K I + TY S
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 378 LMEGL----------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
L+ L D T+S+L++ + +G + + KL EM +
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKS 474
P VT ING AK + M+S C P + Y+TLI+ C Y +
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF--PDVVTYNTLIKGFCKYKRVEE 414
Query: 475 AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
+ + ++ S RGLV YN+LI + G+ + A E++KEMV
Sbjct: 415 GMEVFREMSQRGLVGNT----------------VTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 535 HYGFFPHMFSVLSLIHAL 552
G P++ + +L+ L
Sbjct: 459 SDGVPPNIMTYNTLLDGL 476
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 108/240 (45%), Gaps = 40/240 (16%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V++ +IK C+ +R+EE EV REM+++GL + TYN LI G+ + + A E+
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVF---------------NEMIAS--- 148
+ +M G+ PN TY +L+D LC L+KA VF N MI
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 149 -----------------GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
G P V YN I+ + E+A +F M E G P+
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 573
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN +I +DG+ E + E+ E G D T L+ + G L ++ FL+ML
Sbjct: 574 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS---FLDML 629
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 249/516 (48%), Gaps = 48/516 (9%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P V ++ +I L + R+ EA +++ EM G PD ET+N +I G+CK + A ++
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
++M +RG +P++ TY L++ LC +D A +F + P + +N I +++
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVT 365
Query: 167 SERVEQALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
R++ A + S M G+ PD+ +YN++I + ++G + ALE+ + KG P+
Sbjct: 366 HGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVY 425
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
+Y+ L+ C G + EA+++ EM + P+ + L+ A+C A + EM
Sbjct: 426 SYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM 485
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
+G PD + TFN+LI GLC ++ + AL +LR M G+ + V+YNT++
Sbjct: 486 PRKGCKPD--------VYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVF 405
F + E+K+A +L EM + LDE TY SL++GL G + K
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLC-------------RAGEVDKAR 584
Query: 406 KLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
L +M R+G+ P +++ + INGL + A M+ + P + +++LI
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG--STPDIVTFNSLIN 642
Query: 466 NCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNK 525
GL + G + + ++ + PD +N L+ C+ G V
Sbjct: 643 -----------GLCR----AGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 526 AYEMYKEMVHYGFFPH--MFSVL--SLIHALYYDRK 557
A + E + GF P+ +S+L S+I DR+
Sbjct: 688 ACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRR 723
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 184/377 (48%), Gaps = 54/377 (14%)
Query: 19 VMIRGFATESVMS-------CKEKKVGETFGLLRM--EPYLVSFKGVIKELCEKERMEEA 69
++IRGFA + + CK +V L +P +V F +I R+++A
Sbjct: 313 MLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDA 372
Query: 70 KEVVREM-NRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
K V+ +M G+ PD TYN+LI G K + A+E+ MR +G PN +Y L+D
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 129 LLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
C +D+AY V NEM A G P+ +N I+A+ R+ +A+ IF M +G P
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILP------------------------- 222
D+ ++N++IS C+ E++ AL + + + +G++
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 223 ----------DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
D++TY++LI+ LC G + +A LF +MLR +PSN + L+ C
Sbjct: 553 NEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS 612
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
G A EM RG PD +VTFN+LI+GLC R+++ L + R + G
Sbjct: 613 GMVEEAVEFQKEMVLRGSTPD--------IVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 333 LSPDAVSYNTVLFGFCQ 349
+ PD V++NT++ C+
Sbjct: 665 IPPDTVTFNTLMSWLCK 681
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 131/510 (25%), Positives = 224/510 (43%), Gaps = 48/510 (9%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP S+ V++ L + A V +M + + P T+ ++ C V + A+
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
L M G PN Y +LI L +++A ++ EM G +P T+N I
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+R+ +A + + M RG +PD ++Y +++ C+ G ++ A ++ + P+ V
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIV 354
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
++ LI G L +A + +M+ + P TY L+Y Y G +A + +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
MR++G P++ ++ L+ G C L ++DEA +L M GL P+ V +N ++
Sbjct: 415 MRNKGC--------KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLI 466
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS--DEVTYSSLLNDYFAQGNMQ 402
FC+ + +A E+ EM K D YT+ SL+ GL DE+ ++
Sbjct: 467 SAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA------------- 513
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
L R+M G + ++VT IN ++ A+ ++ M+ + I Y++
Sbjct: 514 --LWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG--SPLDEITYNS 569
Query: 463 LIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
LI K G V++A E+M P N+LI CR G
Sbjct: 570 LI---------------KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 523 VNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
V +A E KEMV G P + + SLI+ L
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 143/282 (50%), Gaps = 14/282 (4%)
Query: 19 VMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEV 72
+++ GF CK K+ E + +L ++P V F +I C++ R+ EA E+
Sbjct: 429 ILVDGF-------CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLC 131
REM RKG PD T+N+LI G+C+V + A+ L M G+ N TY +LI+ L
Sbjct: 482 FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 132 TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+ +A K+ NEM+ G TYN I + V++A +F M G +P +S
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNIS 601
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
N +I+ C+ G +E+A+E + E V +G PD VT+++LI LC G + + +F ++
Sbjct: 602 CNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
+ P T+ LM C G A L DE GF+P+
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 161/381 (42%), Gaps = 48/381 (12%)
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
P +Y+ +++ L A ++F +ML + P+ T+ +M A+C V E A L
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+M G +P+ VI + LIH L RV+EAL +L M MG PDA ++N
Sbjct: 240 LRDMTKHGCVPNSVI--------YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGN 400
V+ G C+ + +A ++ M L+ G + D++TY L+N G
Sbjct: 292 DVILGLCKFDRINEAAKMVNRM--------------LIRGFAPDDITYGYLMNGLCKIGR 337
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIY 460
+ L + + P+ V I+G AK +L M++S Y
Sbjct: 338 VDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS----------Y 383
Query: 461 DTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRR 520
+ + C+Y L+ + GLV A M N KP+ Y +L+ C+
Sbjct: 384 GIVPDVCTYNS------LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Query: 521 GNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLR-SCNLNDSEL 579
G +++AY + EM G P+ LI A + + E + R R C +
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Query: 580 HQVLNEIEVKKCKIDALLNAL 600
+ +++ + C++D + +AL
Sbjct: 498 NSLISGL----CEVDEIKHAL 514
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/552 (26%), Positives = 257/552 (46%), Gaps = 44/552 (7%)
Query: 37 VGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMC 96
+GE LR+ L S+ +I C + ++ A V+ +M + G PD T ++L+ G C
Sbjct: 102 LGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYC 161
Query: 97 KVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVA 155
+ + AV L DQM V PN T+ +LI L +A + + M+A G P +
Sbjct: 162 HGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF 221
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
TY + ++ AL + M + + D+V Y +I C + AL + E
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
KGI P+ VTY++LI+ LC G +A L +M+ ++P+ T++ L+ A+ G+
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
A L+DEM R PD + T+++LI+G C +R+DEA + M P
Sbjct: 342 VEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
+ V+YNT++ GFC+ + +++ EL EM ++ + + TY +L++GL
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL------------- 440
Query: 396 FAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP 455
F G+ K+ ++M +G PD +T + ++GL K + K +++ + P
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG--KLEKALVVFEYLQKSKMEP 498
Query: 456 SYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
Y+ +IE C + + L S +G VKP+ +Y +I
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG----------------VKPNVIIYTTMI 542
Query: 515 FDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNL 574
CR+G +A +++EM G P+ + +LI A D + +I+ +RSC
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKE-MRSCGF 601
Query: 575 --NDSELHQVLN 584
+ S + V+N
Sbjct: 602 VGDASTISMVIN 613
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 148/541 (27%), Positives = 245/541 (45%), Gaps = 42/541 (7%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N++I F S + +G+ L EP +V+ ++ C +R+ EA +V +M
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LD 136
P+ T+N LI G+ AV L D+M RG P+ TY ++++ LC +D
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A + +M V Y I A + + V AL +F+ M +G+ P++V+YN++I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
C G A + ++ +E+ I P+ VT+SALI A +G L EA L+ EM++ +
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P TY+ L+ +C+ A H+ + M + P+ +VT+N LI G C +
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--------VVTYNTLIKGFCKAK 409
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
RV+E + + R M + GL + V+YNT++ G Q + A ++ +M
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM------------- 456
Query: 377 SLMEGL-SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT 435
+ +G+ D +TYS LL+ G ++K + + ++ PD T + I G+ K
Sbjct: 457 -VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG- 514
Query: 436 TSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
+ G L S P+ IIY T+I F +GL EA
Sbjct: 515 -KVEDGWDLFCSLSLKGVKPNVIIYTTMISG---------------FCRKGLKEEADALF 558
Query: 496 ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
M P+ YN LI R G+ + E+ KEM GF ++ +I+ L+
Sbjct: 559 REMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDG 618
Query: 556 R 556
R
Sbjct: 619 R 619
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 201/448 (44%), Gaps = 49/448 (10%)
Query: 128 DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
++L LD A +F EM+ S LPS+ +NK ++A + + + + M +S
Sbjct: 54 NVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY 113
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
DL SYN +I+ FC+ +L AL + + ++ G PD VT S+L+ C + EA L
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
+M + P+ T+ L++ L + S A L D M RG PD L T+
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPD--------LFTYGT 225
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
+++GLC +D AL +L+ M + + D V Y T++ C + + A L EMD K
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 368 IWLDEYTYESLMEGL------SDE----------------VTYSSLLNDYFAQGNMQKVF 405
I + TY SL+ L SD VT+S+L++ + +G + +
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 406 KLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
KL EM + PD T ING AK + MIS C P+ + Y+TLI+
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYNTLIK 403
Query: 466 N-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVN 524
C + + L ++ S RGLV YN LI + G+ +
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNT----------------VTYNTLIQGLFQAGDCD 447
Query: 525 KAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
A +++K+MV G P + + L+ L
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGL 475
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEV 72
++V + +I F E + EK E ++P + ++ +I C +R++EAK +
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLC 131
M K P+ TYN LI G CK + + +EL+ +M RGL N TY +LI L
Sbjct: 383 FELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 132 TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
D A K+F +M++ G P + TY+ + ++E+AL +F + + + PD+ +
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN +I C+ G++E ++ KG+ P+ + Y+ +I C +G EA LF EM
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
P++ TY L+ A G+ + + L EMR GF+ D
Sbjct: 563 EDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 13/128 (10%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLL------RMEPYLVSFKGVIKELCEKERMEEAKE 71
N+MI G CK KV + + L ++P ++ + +I C K EEA
Sbjct: 504 NIMIEGM-------CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
+ REM G P+ TYN LI + + + EL +MR G + T +I++L
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 616
Query: 132 TWWLDKAY 139
L+K+Y
Sbjct: 617 DGRLEKSY 624
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 250/572 (43%), Gaps = 71/572 (12%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V++ V+ C+K R + A E++ M KG+ D TYN LI +C+ + L
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
MR R + PNE TY +LI+ + A ++ NEM++ G P+ T+N I ++S
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
++AL +F M +GL+P VSY ++ C++ E + A G+ +T
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y+ +I LC G L EA L EM + + P TY+ L+ +C VG F A + +
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505
Query: 287 HRGFLPDFVI---------------------------QFSPSLVTFNALIHGLCSLERVD 319
G P+ +I + TFN L+ LC +V
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565
Query: 320 EALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
EA +R M G+ P+ VS++ ++ G+ E KA+ + EM + +TY SL+
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 380 EGLS----------------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
+GL D V Y++LL GN+ K L EM + L
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685
Query: 418 PDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENC-SYVEFKSAV 476
PDS T I+GL +K T IA + + ++ +P+ ++Y ++ ++K+ +
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 744
Query: 477 -------------------GLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDH 517
++ +S G + + M N + P+ YN+L+ +
Sbjct: 745 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 804
Query: 518 CRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
+R +V+ ++ +Y+ ++ G P + SL+
Sbjct: 805 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/508 (26%), Positives = 236/508 (46%), Gaps = 43/508 (8%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + +F +I LC + E++ ++++M + G AP TYN ++ CK A+EL
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
D M+ +G+ + TY LI LC + + K Y + +M P+ TYN I + +
Sbjct: 291 LDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSN 350
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+V A + + M GLSP+ V++NA+I +G ++AL++ KG+ P +V+
Sbjct: 351 EGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVS 410
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y L+ LC A ++ M R V TYT ++ C G A L +EM
Sbjct: 411 YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMS 470
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
G PD +VT++ALI+G C + R A I+ + +GLSP+ + Y+T+++
Sbjct: 471 KDGIDPD--------IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESL-MEGLS-DEVTYSSLLNDYFAQGNMQKV 404
C++ LK+A + YE++ +EG + D T++ L+ G + +
Sbjct: 523 CCRMGCLKEAIRI---------------YEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
+ R MT +G LP++V+ ING + ++ ++D +
Sbjct: 568 EEFMRCMTSDGILPNTVSFDCLINGYGNSGE-----------------GLKAFSVFDEMT 610
Query: 465 ENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVN 524
+ + F + L+K G + EA + +H + D +YN L+ C+ GN+
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 525 KAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
KA ++ EMV P ++ SLI L
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGL 698
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/545 (23%), Positives = 240/545 (44%), Gaps = 41/545 (7%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P +V++ +I C+ R + AKE+V + R GL+P+ Y+ LI C++ + A+
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+Y+ M + G + + T+ L+ LC + +A + M + G LP+ +++ I Y
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+S +A +F M + G P +Y +++ C+ G L +A + D
Sbjct: 594 GNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT 653
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
V Y+ L+ A+C G+L +A LF EM++ + P + TYT L+ C G+ +A E
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
RG P+ V + + G+ + + M +G +PD V+ N ++
Sbjct: 714 AEARG-------NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 766
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
G+ ++ +++K +L EM + G + TY+ LL+ Y + ++
Sbjct: 767 DGYSRMGKIEKTNDLLPEMGNQ-------------NGGPNLTTYNILLHGYSKRKDVSTS 813
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
F L R + NG LPD +T + G+ + I IL I + + + Y +
Sbjct: 814 FLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI-CRGVEVDRYTFNMLIS 872
Query: 465 ENCSYVEFKSAVGLVKDFSTRGL-------------------VNEAAIAHERMHNMSVKP 505
+ C+ E A LVK ++ G+ E+ + M + P
Sbjct: 873 KCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISP 932
Query: 506 DGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVI 565
+ Y LI CR G++ A+ + +EM+ + P + +++ AL K E ++
Sbjct: 933 ESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLL 992
Query: 566 RNTLR 570
R L+
Sbjct: 993 RFMLK 997
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 201/430 (46%), Gaps = 47/430 (10%)
Query: 152 PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI 211
PSV Y+ I YL ++ +L IF M G +P + + NA++ + GE
Sbjct: 163 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220
Query: 212 KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
E +++ I PD T++ LI LC +GS ++ L +M + +P+ TY +++ YC
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 272 VGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM 331
G F A L D M+ +G D + T+N LIH LC R+ + +LR M +
Sbjct: 281 KGRFKAAIELLDHMKSKGVDAD--------VCTYNMLIHDLCRSNRIAKGYLLLRDMRKR 332
Query: 332 GLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSS 390
+ P+ V+YNT++ GF + K++ + E L GLS + VT+++
Sbjct: 333 MIHPNEVTYNTLINGFSN--------------EGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 391 LLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQ 450
L++ + ++GN ++ K+ M G P V+ GV ++GL K A +A+G +RM +
Sbjct: 379 LIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNG 438
Query: 451 CLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGL----------------VNEAAI 493
I Y +I+ C AV L+ + S G+ V
Sbjct: 439 VCV--GRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 496
Query: 494 AHE---RMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIH 550
A E R++ + + P+G +Y+ LI++ CR G + +A +Y+ M+ G F+ L+
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Query: 551 ALYYDRKNSE 560
+L K +E
Sbjct: 557 SLCKAGKVAE 566
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 173/390 (44%), Gaps = 28/390 (7%)
Query: 75 EMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW 134
+M+ G PD T NA+I G ++ + +L +M + PN TY L+
Sbjct: 749 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808
Query: 135 -LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
+ ++ ++ +I +G LP T + + S +E L I A RG+ D ++N
Sbjct: 809 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+ISK C +GE+ A ++ GI D T A++ L E+ + EM +
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
+SP + Y L+ C VG+ AF + +EM + P V +A++ L
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEM--------IAHKICPPNVAESAMVRALA 980
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
+ DEA +LR M +M L P S+ T++ C+ + +A EL+V M + LD
Sbjct: 981 KCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLV 1040
Query: 374 TYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
+Y L+ GL A+G+M F+L EM +G+L ++ T I GL +
Sbjct: 1041 SYNVLITGLC-------------AKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087
Query: 434 ATTSIAKGILLR------MISSQCLTMPSY 457
T I+L+ I+S L+ S+
Sbjct: 1088 ETAFSGADIILKDLLARGFITSMSLSQDSH 1117
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
+++ P + SF ++ C+ + EA E+ M+ GL D +YN LI G+C +M
Sbjct: 998 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1057
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCT--WWLDKAYKVFNEMIASGFLPSVA 155
A ELY++M+ G N TY +LI L A + +++A GF+ S++
Sbjct: 1058 AFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMS 1111
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 153/566 (27%), Positives = 255/566 (45%), Gaps = 57/566 (10%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
L +F +++ LC+K ++E ++++ ++ ++G+ P+ TYN I G+C+ + AV +
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 110 QMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
+ +G P+ TY +LI LC +A +M+ G P TYN I Y
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
V+ A I G PD +Y ++I C +GE +AL + E + KGI P+ + Y+
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
LI+ L QG + EA L EM + P T+ L+ C +G S A L M +
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
G+ PD + TFN LIHG + +++ AL IL M + G+ PD +YN++L G C
Sbjct: 456 GYFPD--------IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLC 507
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLE 408
+ + + E M EK + +T+ L+E L Y L + L
Sbjct: 508 KTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC---RYRKL----------DEALGLL 554
Query: 409 REMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM-----ISSQCLTMPSYIIYDTL 463
EM PD+VT G I+G K A + +M +SS + P+Y I
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSS---STPTYNI---- 607
Query: 464 IENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNV 523
++ F+ + V A + M + + PDG Y L++ C+ GNV
Sbjct: 608 --------------IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 524 NKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVL 583
N Y+ EM+ GF P + ++ +I+ L + + E +I ++ + + +
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK-----GLVPEAV 708
Query: 584 NEIEVKKCKIDALLNALAKIAVDGML 609
N I C +D A K+ ++ +L
Sbjct: 709 NTI----CDVDKKEVAAPKLVLEDLL 730
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 209/444 (47%), Gaps = 41/444 (9%)
Query: 38 GETFGLLRM---------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETY 88
GE G +RM +P ++++ +I LC+ + +EA+ + +M +GL PD TY
Sbjct: 265 GELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTY 324
Query: 89 NALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIA 147
N LI G CK + A + G P++ TY SLID LC ++A +FNE +
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALG 384
Query: 148 SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEK 207
G P+V YN I + + +A + + M+E+GL P++ ++N +++ C+ G +
Sbjct: 385 KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSD 444
Query: 208 ALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
A + + KG PD T++ LI Q + A ++ ML V P TY L+
Sbjct: 445 ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
C +F + M +G +P+L TFN L+ LC ++DEALG+L
Sbjct: 505 GLCKTSKFEDVMETYKTMVEKGC--------APNLFTFNILLESLCRYRKLDEALGLLEE 556
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI-IWLDEYTYESLMEGLS--- 383
M ++PDAV++ T++ GFC+ +L AY L +M+E + TY ++ +
Sbjct: 557 MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKL 616
Query: 384 -------------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
D TY +++ + GN+ +K EM NG++P TLG
Sbjct: 617 NVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLG 676
Query: 425 VFINGLNKKATTSIAKGILLRMIS 448
IN L + A GI+ RM+
Sbjct: 677 RVINCLCVEDRVYEAAGIIHRMVQ 700
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 228/511 (44%), Gaps = 50/511 (9%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP + S+ ++ L + ++A +V M +G+ PD ++ + CK A+
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 107 LYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
L + M +G N Y +++ + + Y++F +M+ASG ++T+NK +
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
V++ + + +RG+ P+L +YN I CQ GEL+ A+ + +E+G PD +
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
TY+ LI LC EA +M+ + P + TY L+ YC G +A + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
GF+PD QF T+ +LI GLC + AL + G+ P+ + YNT++
Sbjct: 348 VFNGFVPD---QF-----TYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL----------------------S 383
G + +A +L EM EK + + T+ L+ GL
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL 443
D T++ L++ Y Q M+ ++ M NG PD T +NGL K +
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 444 LRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMS 502
M+ C P+ ++ L+E+ C Y + A+GL+ E M N S
Sbjct: 520 KTMVEKGC--APNLFTFNILLESLCRYRKLDEALGLL----------------EEMKNKS 561
Query: 503 VKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
V PD + LI C+ G+++ AY ++++M
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 193/418 (46%), Gaps = 40/418 (9%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+ +A VF M P+V +YN ++ + S +QA ++ M +RG++PD+ S+
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+ FC+ AL + +G + V Y ++ + E ++LF +ML
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
VS ST+ +L+ C G+ L D++ RG LP+ L T+N I GLC
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPN--------LFTYNLFIQGLCQ 263
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+D A+ ++ + E G PD ++YN +++G C+ + ++A + Y
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA--------------EVYL 309
Query: 375 YESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
+ + EGL D TY++L+ Y G +Q ++ + NG++PD T I+GL +
Sbjct: 310 GKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 434 ATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAI 493
T+ A + + P+ I+Y+TLI K S +G++ EAA
Sbjct: 370 GETNRALALFNEALGKG--IKPNVILYNTLI---------------KGLSNQGMILEAAQ 412
Query: 494 AHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
M + P+ +N+L+ C+ G V+ A + K M+ G+FP +F+ LIH
Sbjct: 413 LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 38/320 (11%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEV 72
+++ N +I+G + + M + ++ + P + +F ++ LC+ + +A +
Sbjct: 390 NVILYNTLIKGLSNQG-MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC- 131
V+ M KG PD T+N LI G M A+E+ D M G+ P+ TY SL++ LC
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 132 TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
T + + + M+ G P++ T+N + + ++++ALG+ M + ++PD V+
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 192 YNAVISKFCQDGEL----------EKALEIKAET-------------------------- 215
+ +I FC++G+L E+A ++ + T
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
V++ + PD TY ++ C G++ + LEM+ PS +T R++ C+
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRV 688
Query: 276 SMAFHLHDEMRHRGFLPDFV 295
A + M +G +P+ V
Sbjct: 689 YEAAGIIHRMVQKGLVPEAV 708
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 125/252 (49%), Gaps = 9/252 (3%)
Query: 11 FRHMVRMNVMIRGFATESVMSCKEKKVGETFGLL---RMEPYLVSFKGVIKELCEKERME 67
F + N++I G++T+ M + E ++ ++P + ++ ++ LC+ + E
Sbjct: 458 FPDIFTFNILIHGYSTQLKM----ENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
+ E + M KG AP+ T+N L+ +C+ R + A+ L ++M+ + ++P+ T+ +LI
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 128 DLLC-TWWLDKAYKVFNEMI-ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
D C LD AY +F +M A S TYN I A+ V A +F M +R L
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
PD +Y ++ FC+ G + + E +E G +P T +I LC++ + EA
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 246 LFLEMLRGDVSP 257
+ M++ + P
Sbjct: 694 IIHRMVQKGLVP 705
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 176/405 (43%), Gaps = 51/405 (12%)
Query: 159 KFITAYLSSERVE-QALGIFSAM-AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
K +TA + ++ +AL +F++M E G L +Y +VI K G+ E E+ +
Sbjct: 8 KHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMR 67
Query: 217 EK-GILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
E G + Y ++ +G + EA ++F M D P+ +Y +M G F
Sbjct: 68 ENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYF 127
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
A ++ MR RG PD + +F + C R AL +L M G
Sbjct: 128 DQAHKVYMRMRDRGITPD--------VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV-TYSSLLND 394
+ V+Y TV+ GF + + YEL +M L G+S + T++ LL
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKM--------------LASGVSLCLSTFNKLLRV 225
Query: 395 YFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL-- 452
+G++++ KL ++ + G LP+ T +FI GL ++ A +RM+ CL
Sbjct: 226 LCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA----VRMVG--CLIE 279
Query: 453 --TMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVY 510
P I Y+ LI GL K+ + EA + +M N ++PD Y
Sbjct: 280 QGPKPDVITYNNLI-----------YGLCKNSKFQ----EAEVYLGKMVNEGLEPDSYTY 324
Query: 511 NLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
N LI +C+ G V A + + V GF P F+ SLI L ++
Sbjct: 325 NTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHE 369
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 227/469 (48%), Gaps = 37/469 (7%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++ +I+ C + +A +++ + G PD TYN +I G CK + A+ +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
D+M V SP+ TY +++ LC + L +A +V + M+ P V TY I A
Sbjct: 195 LDRMSV---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCR 251
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
V A+ + M +RG +PD+V+YN +++ C++G L++A++ + G P+ +T
Sbjct: 252 DSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
++ +++++C G +A L +MLR SPS T+ L+ C G A + ++M
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
G P+ +++N L+HG C +++D A+ L M G PD V+YNT+L
Sbjct: 372 QHG--------CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTA 423
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS----------------------D 384
C+ +++ A E+ ++ K TY ++++GL+ D
Sbjct: 424 LCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPD 483
Query: 385 EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILL 444
+TYSSL+ +G + + K E R G P++VT + GL K T A L+
Sbjct: 484 TITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLV 543
Query: 445 RMISSQCLTMPSYIIYDTLIENCSYVEF-KSAVGLVKDFSTRGLVNEAA 492
MI+ C P+ Y LIE +Y K A+ L+ + +GL+ +++
Sbjct: 544 FMINRGC--KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 214/432 (49%), Gaps = 57/432 (13%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLL-RME--PYLVSFKGVIKELCEKERMEEAK 70
++ NVMI G+ CK ++ +L RM P +V++ +++ LC+ ++++A
Sbjct: 172 VITYNVMISGY-------CKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
EV+ M ++ PD TY LI C+ + A++L D+MR RG +P+ TY L++ +
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 131 CT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER-------------------- 169
C LD+A K N+M +SG P+V T+N + + S+ R
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 344
Query: 170 ---------------VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
+ +A+ I M + G P+ +SYN ++ FC++ ++++A+E
Sbjct: 345 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLER 404
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
V +G PD VTY+ ++ ALC G + +A ++ ++ SP TY ++ G+
Sbjct: 405 MVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGK 464
Query: 275 FSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS 334
A L DEMR + PD +T+++L+ GL +VDEA+ MG+
Sbjct: 465 TGKAIKLLDEMRAKDLKPD--------TITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 335 PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYS---SL 391
P+AV++N+++ G C+ R+ +A + V M + +E +Y L+EGL+ E L
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 392 LNDYFAQGNMQK 403
LN+ +G M+K
Sbjct: 577 LNELCNKGLMKK 588
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 228/500 (45%), Gaps = 42/500 (8%)
Query: 57 IKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGL 116
++++ +EE + + M G PD LI G C++ A ++ + + G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 117 SPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
P+ TY +I C ++ A V + M S P V TYN + + S +++QA+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
+ M +R PD+++Y +I C+D + A+++ E ++G PD VTY+ L+ +C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
+G L EA +M P+ T+ ++ + C G + A L +M +G
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG------ 339
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
FSPS+VTFN LI+ LC + A+ IL MP+ G P+++SYN +L GFC+ +++ +
Sbjct: 340 --FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDR 397
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
A +E E+++ Y D VTY+++L G ++ ++ +++ G
Sbjct: 398 A----IEYLERMVSRGCY---------PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSA 475
P +T I+GL K T A +L M + P I Y +
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD--LKPDTITYSS------------- 489
Query: 476 VGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVH 535
LV S G V+EA M ++P+ +N ++ C+ ++A + M++
Sbjct: 490 --LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 536 YGFFPHMFSVLSLIHALYYD 555
G P+ S LI L Y+
Sbjct: 548 RGCKPNETSYTILIEGLAYE 567
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 215/468 (45%), Gaps = 49/468 (10%)
Query: 132 TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
T L++ +K M+ G +P + I + + +A I + G PD+++
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN +IS +C+ GE+ AL + + PD VTY+ ++++LC G L +A ++ ML
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
+ D P TYT L+ A C A L DEMR RG PD +VT+N L++G
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPD--------VVTYNVLVNG 283
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
+C R+DEA+ L MP G P+ +++N +L C A +L +M
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-------- 335
Query: 372 EYTYESLMEGLSDE-VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL 430
L +G S VT++ L+N +G + + + +M ++G P+S++ ++G
Sbjct: 336 ------LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 431 NKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRG--- 486
K+ A L RM+S C P + Y+T++ C + + AV ++ S++G
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCY--PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP 447
Query: 487 -------LVNEAAIAH---------ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMY 530
+++ A A + M +KPD Y+ L+ R G V++A + +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 531 KEMVHYGFFPHMFSVLSLIHALYYDRK-NSEMGWVIRNTLRSCNLNDS 577
E G P+ + S++ L R+ + + +++ R C N++
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNET 555
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 159/386 (41%), Gaps = 52/386 (13%)
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
V N + + + GELE+ + V G +PD + + LI+ C G +A + LE
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI-LE 161
Query: 250 MLRGDVS-PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNAL 308
+L G + P TY ++ YC GE + A + D M SP +VT+N +
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM-----------SVSPDVVTYNTI 210
Query: 309 IHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKII 368
+ LC ++ +A+ +L M + PD ++Y ++ C+ + A +L EM ++
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 369 WLDEYTYESLMEGLSDE----------------------VTYSSLLNDYFAQGNMQKVFK 406
D TY L+ G+ E +T++ +L + G K
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEK 330
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
L +M R G+ P VT + IN L +K A IL +M C P+ + Y+ L+
Sbjct: 331 LLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGC--QPNSLSYNPLLHG 388
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
F ++ A ERM + PD YN ++ C+ G V A
Sbjct: 389 ---------------FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 527 YEMYKEMVHYGFFPHMFSVLSLIHAL 552
E+ ++ G P + + ++I L
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGL 459
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 153/355 (43%), Gaps = 46/355 (12%)
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+DV + ++ + G L E F M+ P T L+ +C +G+ A +
Sbjct: 101 EDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
+ + G +PD ++T+N +I G C ++ AL +L M +SPD V+YNT
Sbjct: 161 EILEGSGAVPD--------VITYNVMISGYCKAGEINNALSVL---DRMSVSPDVVTYNT 209
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
+L C +LK+A E+ M ++ + D TY L+E + +
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD-------------SGVG 256
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
KL EM G PD VT V +NG+ K+ A L M SS C P+ I ++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC--QPNVITHNI 314
Query: 463 LIEN-CSYVEFKSAVGLVKD-----FST--------------RGLVNEAAIAHERMHNMS 502
++ + CS + A L+ D FS +GL+ A E+M
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 503 VKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
+P+ YN L+ C+ +++A E + MV G +P + + +++ AL D K
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/366 (31%), Positives = 190/366 (51%), Gaps = 13/366 (3%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N+++ F E +S +KV + ++P +VSF +I C+ ++E + +M
Sbjct: 244 NILMNKFCKEGNIS-DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLD 136
+ PD TY+ALI +CK M A L+D+M RGL PN+ + +LI +D
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+ + +M++ G P + YN + + + + A I M RGL PD ++Y +I
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
FC+ G++E ALEI+ E + GI D V +SAL+ +C +G + +A EMLR +
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P + TYT +M A+C G+ F L EM+ G + PS+VT+N L++GLC L
Sbjct: 483 PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV--------PSVVTYNVLLNGLCKLG 534
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
++ A +L M +G+ PD ++YNT+L G + K Y K E+ I D +Y+
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIG---IVADLASYK 591
Query: 377 SLMEGL 382
S++ L
Sbjct: 592 SIVNEL 597
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 199/393 (50%), Gaps = 42/393 (10%)
Query: 139 YKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISK 198
+ + E++ +GF +V +N + + + A +F + +R L P +VS+N +I+
Sbjct: 225 WGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLING 284
Query: 199 FCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPS 258
+C+ G L++ +K + + PD TYSALI ALC + + A LF EM + + P+
Sbjct: 285 YCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPN 344
Query: 259 NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERV 318
+ +T L++ + GE + + +M +G PD V+ +N L++G C +
Sbjct: 345 DVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVL--------YNTLVNGFCKNGDL 396
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
A I+ GM GL PD ++Y T++ GFC+ +++ A E++ EMD+ I LD + +L
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 379 MEGL----------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
+ G+ D+VTY+ +++ + +G+ Q FKL +EM +G+
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE------NCS-- 468
+P VT V +NGL K A +L M++ +P I Y+TL+E N S
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIG--VVPDDITYNTLLEGHHRHANSSKR 574
Query: 469 YVEFKSAVGLVKDFST-RGLVNEAAIAHERMHN 500
Y++ K +G+V D ++ + +VNE A + N
Sbjct: 575 YIQ-KPEIGIVADLASYKSIVNELDRASKDHRN 606
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 249/541 (46%), Gaps = 48/541 (8%)
Query: 37 VGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMC 96
+GE L + L ++ +I C + ++ A ++ +M + G P T ++L+ G C
Sbjct: 107 LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 97 KVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVA 155
+ + AV L DQM G P+ T+ +LI L +A + + M+ G P++
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
TY + + AL + + M + D+V +N +I C+ ++ AL + E
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
KGI P+ VTYS+LI LC G +A L +M+ ++P+ T+ L+ A+ G+F
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
A L+D+M R PD + T+N+L++G C +R+D+A + M P
Sbjct: 347 VEAEKLYDDMIKRSIDPD--------IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
D V+YNT++ GFC+ + ++ EL EM + + D TY +L++GL
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL------------- 445
Query: 396 FAQG---NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
F G N QKVFK +M +G PD +T + ++GL A + M S+ +
Sbjct: 446 FHDGDCDNAQKVFK---QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-I 501
Query: 453 TMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
+ Y IY T+IE C + L S +G VKP+ YN
Sbjct: 502 KLDIY-IYTTMIEGMCKAGKVDDGWDLFCSLSLKG----------------VKPNVVTYN 544
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRS 571
+I C + + +AY + K+M G P+ + +LI A D + +IR +RS
Sbjct: 545 TMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIRE-MRS 603
Query: 572 C 572
C
Sbjct: 604 C 604
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/542 (26%), Positives = 239/542 (44%), Gaps = 43/542 (7%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N++I F S +S +G+ L EP +V+ ++ C +R+ +A +V +M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LD 136
G PD T+ LI G+ AV L D+M RG PN TY +++ LC D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A + N+M A+ V +N I + V+ AL +F M +G+ P++V+Y+++I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
S C G A ++ ++ +EK I P+ VT++ALI A +G EA L+ +M++ +
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P TY L+ +C+ A + + M + PD +VT+N LI G C +
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPD--------VVTYNTLIKGFCKSK 414
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
RV++ + R M GL D V+Y T++ G + A ++ +M + D TY
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 377 SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATT 436
L++GL + G ++K ++ M ++ D I G+ K
Sbjct: 475 ILLDGLCN-------------NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG-- 519
Query: 437 SIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
+ G L S P+ + Y+T+I CS + A L+K G +
Sbjct: 520 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL------- 572
Query: 496 ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
P+ YN LI H R G+ + E+ +EM F S + L+ + +D
Sbjct: 573 ---------PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA-STIGLVANMLHD 622
Query: 556 RK 557
+
Sbjct: 623 GR 624
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 192/441 (43%), Gaps = 52/441 (11%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
LD A +F M+ S LPS+ +NK ++A ++ + + + M + L +YN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+I+ FC+ ++ AL + + ++ G P VT S+L+ C + +A L +M+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P T+T L++ L + S A L D M RG P+LVT+ +++GLC
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--------CQPNLVTYGVVVNGLCK 237
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
D AL +L M + D V +NT++ C+ R + A L EM+ K I + T
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 375 YESLMEGL------SDE----------------VTYSSLLNDYFAQGNMQKVFKLEREMT 412
Y SL+ L SD VT+++L++ + +G + KL +M
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVE 471
+ PD T +NG AK + M+S C P + Y+TLI+ C
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF--PDVVTYNTLIKGFCKSKR 415
Query: 472 FKSAVGLVKDFSTRGLVNE-------------------AAIAHERMHNMSVKPDGAVYNL 512
+ L ++ S RGLV + A ++M + V PD Y++
Sbjct: 416 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 475
Query: 513 LIFDHCRRGNVNKAYEMYKEM 533
L+ C G + KA E++ M
Sbjct: 476 LLDGLCNNGKLEKALEVFDYM 496
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 150/541 (27%), Positives = 247/541 (45%), Gaps = 48/541 (8%)
Query: 37 VGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMC 96
+GE L + L ++ +I C + ++ A ++ +M + G P T ++L+ G C
Sbjct: 32 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 91
Query: 97 KVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVA 155
+ + AV L DQM G P+ T+ +LI L +A + + M+ G P++
Sbjct: 92 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 151
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
TY + ++ A + + M + D+V +N +I C+ ++ AL + E
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
KGI P+ VTYS+LI LC G +A L +M+ ++P+ T+ L+ A+ G+F
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
A LHD+M R PD + T+N+LI+G C +R+D+A + M P
Sbjct: 272 VEAEKLHDDMIKRSIDPD--------IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
D +YNT++ GFC+ + ++ EL EM + + D TY +L++GL
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL------------- 370
Query: 396 FAQG---NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
F G N QKVFK +M +G PD +T + ++GL A + M S+ +
Sbjct: 371 FHDGDCDNAQKVFK---QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-I 426
Query: 453 TMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
+ Y IY T+IE C + L S +G VKP+ YN
Sbjct: 427 KLDIY-IYTTMIEGMCKAGKVDDGWDLFCSLSLKG----------------VKPNVVTYN 469
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRS 571
+I C + + +AY + K+M G P + +LI A D + +IR +RS
Sbjct: 470 TMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIRE-MRS 528
Query: 572 C 572
C
Sbjct: 529 C 529
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 225/489 (46%), Gaps = 55/489 (11%)
Query: 32 CKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C K++ + L+ P ++F +I L + EA +V M ++G P+
Sbjct: 91 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 150
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNE 144
TY ++ G+CK ++ A L ++M + + + ++ID LC + +D A +F E
Sbjct: 151 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKE 210
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M G P+V TY+ I+ S R A + S M E+ ++P+LV++NA+I F ++G+
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 270
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+A ++ + +++ I PD TY++LI C+ L +A +F M+ D P TY
Sbjct: 271 FVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNT 330
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ +C L EM HRG + D VT+ LI GL D A +
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGD--------TVTYTTLIQGLFHDGDCDNAQKV 382
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL-- 382
+ M G+ PD ++Y+ +L G C +L+KA E+ M + I LD Y Y +++EG+
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 383 --------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
+ VTY+++++ ++ +Q+ + L ++M +G LPDS T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 423 LGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDF 482
I + + + ++ M S C +V S +GLV +
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRS------------------CRFVGDASTIGLVANM 544
Query: 483 STRGLVNEA 491
G ++++
Sbjct: 545 LHDGRLDKS 553
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 189/431 (43%), Gaps = 52/431 (12%)
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M+ S LPS+ +NK ++A ++ + + + M G+S +L +YN +I+ FC+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+ AL + + ++ G P VT S+L+ C + +A L +M+ P T+T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L++ L + S A L D M RG P+LVT+ +++GLC +D A +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRG--------CQPNLVTYGVVVNGLCKRGDIDLAFNL 172
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL-- 382
L M + D V +NT++ C+ R + A L EM+ K I + TY SL+ L
Sbjct: 173 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 232
Query: 383 ----SDE----------------VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
SD VT+++L++ + +G + KL +M + PD T
Sbjct: 233 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT 292
Query: 423 LGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKD 481
ING AK + M+S C P Y+TLI+ C + L ++
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCF--PDLDTYNTLIKGFCKSKRVEDGTELFRE 350
Query: 482 FSTRGLVNE-------------------AAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
S RGLV + A ++M + V PD Y++L+ C G
Sbjct: 351 MSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 523 VNKAYEMYKEM 533
+ KA E++ M
Sbjct: 411 LEKALEVFDYM 421
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 148/540 (27%), Positives = 243/540 (45%), Gaps = 48/540 (8%)
Query: 38 GETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCK 97
GE +L + L ++ +I LC + ++ A ++ +M + G P T N+L+ G C
Sbjct: 88 GEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH 147
Query: 98 VRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVAT 156
+ AV L DQM G P+ T+ +L+ L +A + M+ G P + T
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 157 YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
Y I + AL + + M + + D+V Y+ VI C+ ++ AL + E
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
KGI PD TYS+LI LC G +A L +ML ++P+ T+ L+ A+ G+
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A L DEM R P++VT+N+LI+G C +R+DEA I M PD
Sbjct: 328 EAEKLFDEMIQR--------SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
V+YNT++ GFC+ +++ EL +M + + + + VTY++L++ +F
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGL-------------VGNTVTYTTLIHGFF 426
Query: 397 AQG---NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
N Q VFK +M +G P+ +T ++GL K A + + S+
Sbjct: 427 QASDCDNAQMVFK---QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK--M 481
Query: 454 MPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNL 512
P Y+ + E C + + L S +G VKPD YN
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG----------------VKPDVIAYNT 525
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSC 572
+I C++G +AY ++ +M G P + +LI A D + +I+ +RSC
Sbjct: 526 MISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE-MRSC 584
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/517 (26%), Positives = 230/517 (44%), Gaps = 40/517 (7%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N+MI S +S +G+ L P +V+ ++ C R+ EA +V +M
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKL-GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LD 136
G PD T+ L+ G+ + AV L ++M V+G P+ TY ++I+ LC D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A + N+M V Y+ I + V+ AL +F+ M +G+ PD+ +Y+++I
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLI 282
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
S C G A + ++ +E+ I P+ VT+++LI A +G L EA LF EM++ +
Sbjct: 283 SCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P+ TY L+ +C+ A + M + LPD +VT+N LI+G C +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD--------VVTYNTLINGFCKAK 394
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
+V + + + R M GL + V+Y T++ GF Q + A + +M + + TY
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYN 454
Query: 377 SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATT 436
+L++GL G ++K + + ++ PD T + G+ K
Sbjct: 455 TLLDGLC-------------KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG-- 499
Query: 437 SIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHE 496
+ G L S P I Y+T+I F +GL EA
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISG---------------FCKKGLKEEAYTLFI 544
Query: 497 RMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
+M PD YN LI H R G+ + E+ KEM
Sbjct: 545 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 210/443 (47%), Gaps = 44/443 (9%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERME 67
+V +N ++ GF C ++ E L+ +P V+F ++ L + +
Sbjct: 135 IVTLNSLLNGF-------CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
EA +V M KG PD TY A+I G+CK A+ L ++M + + Y ++I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 128 DLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
D LC + +D A +F EM G P V TY+ I+ + R A + S M ER ++
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
P++V++N++I F ++G+L +A ++ E +++ I P+ VTY++LI C+ L EA +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
F M+ D P TY L+ +C + L +M RG + + VT+
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN--------TVTYT 419
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
LIHG D A + + M G+ P+ ++YNT+L G C+ +L+KA + + +
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 367 IIWLDEYTYESLMEGL----------------------SDEVTYSSLLNDYFAQGNMQKV 404
+ D YTY + EG+ D + Y+++++ + +G ++
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 405 FKLEREMTRNGYLPDSVTLGVFI 427
+ L +M +G LPDS T I
Sbjct: 540 YTLFIKMKEDGPLPDSGTYNTLI 562
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 200/414 (48%), Gaps = 43/414 (10%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P LV++ VI LC++ + A ++ +M + + D Y+ +I +CK R++ A+
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTW--WLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
L+ +M +G+ P+ TY SLI LC + W D A ++ ++M+ P+V T+N I A+
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD-ASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
++ +A +F M +R + P++V+YN++I+ FC L++A +I V K LPD
Sbjct: 321 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+ LI C + + +LF +M R + + TYT L++ + + A + +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 285 MRHRGFLPDFVI---------------------------QFSPSLVTFNALIHGLCSLER 317
M G P+ + + P + T+N + G+C +
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
V++ + + G+ PD ++YNT++ GFC+ ++AY L ++M E
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED----------- 549
Query: 378 LMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
L D TY++L+ + G+ +L +EM + D+ T G+ + L+
Sbjct: 550 --GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 601
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 143/282 (50%), Gaps = 2/282 (0%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEV 72
++V N +I FA E + EK E ++P +V++ +I C +R++EA+++
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLC 131
M K PD TYN LI G CK + ++ +EL+ M RGL N TY +LI
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 132 TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
D A VF +M++ G P++ TYN + + ++E+A+ +F + + + PD+ +
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN + C+ G++E ++ KG+ PD + Y+ +I C +G EA+ LF++M
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK 547
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
P + TY L+ A+ G+ + + L EMR F D
Sbjct: 548 EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 170/404 (42%), Gaps = 68/404 (16%)
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
L L EA DLF EM++ PS +++L+ A + +F + ++M +
Sbjct: 42 LHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME--------I 93
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
+ S +L T+N +I+ LC ++ AL IL M ++G P V+ N++L GFC + +
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
A L +M E M D VT+++L++ F + L M G
Sbjct: 154 AVALVDQMVE-------------MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKS 474
PD VT G INGL K+ +A +L +M + +IY T+I++ C Y
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK--IEADVVIYSTVIDSLCKYRHVDD 258
Query: 475 AVGLVKDFSTRGL-------------------VNEAAIAHERMHNMSVKPDGAVYNLLIF 515
A+ L + +G+ ++A+ M + P+ +N LI
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 516 DHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLN 575
+ G + +A +++ EM+ P++ + SLI+ G+ + + L
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLIN-----------GFCMHDRL------ 361
Query: 576 DSELHQVLNEIEVKKCKID-----ALLNAL--AKIAVDGMLLDR 612
E Q+ + K C D L+N AK VDGM L R
Sbjct: 362 -DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 144/543 (26%), Positives = 251/543 (46%), Gaps = 48/543 (8%)
Query: 37 VGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMC 96
+GE L + L ++ I C + ++ A V+ +M + G PD T ++L+ G C
Sbjct: 105 LGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC 164
Query: 97 KVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVA 155
+ + AV L DQM G P+ T+ +LI L +A + ++M+ G P +
Sbjct: 165 HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
TY + ++ AL + M + + D+V YN +I C+ ++ AL + E
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
KGI PD TYS+LI LC G +A L +M+ ++P+ T++ L+ A+ G+
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
A L+DEM R PD + T+++LI+G C +R+DEA + M P
Sbjct: 345 VEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
+ V+Y+T++ GFC+ + +++ EL EM ++ + + + VTY++L++ +
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL-------------VGNTVTYTTLIHGF 443
Query: 396 FAQ---GNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
F N Q VFK +M G P+ +T + ++GL K +AK +++ +
Sbjct: 444 FQARDCDNAQMVFK---QMVSVGVHPNILTYNILLDGLCKNG--KLAKAMVVFEYLQRST 498
Query: 453 TMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
P Y+ +IE C + + L + S +G V P+ YN
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG----------------VSPNVIAYN 542
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRS 571
+I CR+G+ +A + K+M G P+ + +LI A D +I+ +RS
Sbjct: 543 TMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKE-MRS 601
Query: 572 CNL 574
C
Sbjct: 602 CGF 604
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 217/471 (46%), Gaps = 53/471 (11%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+D A +F +M+ S PS+ +NK ++A + E + + M G+S DL +Y+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
I+ FC+ +L AL + A+ ++ G PD VT S+L+ C + +A L +M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P T+T L++ L + S A L D+M RG PD LVT+ +++GLC
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD--------LVTYGTVVNGLCK 235
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+D AL +L+ M + + D V YNT++ G C+ + + A L EMD K I D +T
Sbjct: 236 RGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFT 295
Query: 375 YESLMEGL------SDE----------------VTYSSLLNDYFAQGNMQKVFKLEREMT 412
Y SL+ L SD VT+S+L++ + +G + + KL EM
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 355
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVE 471
+ PD T ING AK + MIS C P+ + Y TLI+ C
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYSTLIKGFCKAKR 413
Query: 472 FKSAVGLVKDFSTRGLV-------------------NEAAIAHERMHNMSVKPDGAVYNL 512
+ + L ++ S RGLV + A + ++M ++ V P+ YN+
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGW 563
L+ C+ G + KA +++ + P +++ +I + K E GW
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK-VEDGW 523
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/474 (26%), Positives = 219/474 (46%), Gaps = 40/474 (8%)
Query: 32 CKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C K++ + L+ +P +F +I L + EA +V +M ++G PD
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNE 144
TY ++ G+CK ++ A+ L +M + + Y ++ID LC + +D A +F E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTE 283
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M G P V TY+ I+ + R A + S M ER ++P++V+++A+I F ++G+
Sbjct: 284 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 343
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L +A ++ E +++ I PD TYS+LI C+ L EA +F M+ D P+ TY+
Sbjct: 344 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYST 403
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ +C L EM RG + + VT+ LIHG D A +
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGN--------TVTYTTLIHGFFQARDCDNAQMV 455
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD 384
+ M +G+ P+ ++YN +L G C+ +L KA + + + D YTY ++EG+
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC- 514
Query: 385 EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILL 444
G ++ ++L ++ G P+ + I+G +K + A +L
Sbjct: 515 ------------KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 445 RMISSQCLTMPSYIIYDTLIE----------NCSYVEFKSAVGLVKDFSTRGLV 488
+M L P+ Y+TLI + ++ + G D ST GLV
Sbjct: 563 KMKEDGPL--PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 206/409 (50%), Gaps = 33/409 (8%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P LV++ V+ LC++ ++ A ++++M + + D YN +I G+CK ++M A+
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTW--WLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
L+ +M +G+ P+ TY SLI LC + W D A ++ ++MI P+V T++ I A+
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD-ASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ ++ +A ++ M +R + PD+ +Y+++I+ FC L++A + + K P+
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTYS LI+ C + E +LF EM + + + TYT L++ + + A + +
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M G P+++T+N L+ GLC ++ +A+ + + + PD +YN ++
Sbjct: 459 MVSVGV--------HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG----------------------L 382
G C+ +++ +EL + K + + Y +++ G L
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 383 SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
+ TY++L+ G+ + +L +EM G+ D+ T+G+ N L+
Sbjct: 571 PNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH 619
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 105/240 (43%), Gaps = 40/240 (16%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V++ +IK C+ +R+EE E+ REM+++GL + TY LI G + R+ A +
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVF---------------NEMIAS--- 148
+ QM G+ PN TY L+D LC L KA VF N MI
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 149 -----------------GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
G P+V YN I+ + E+A + M E G P+ +
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN +I +DG+ E + E+ E G D T L+ + G L ++ FL+ML
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLDKS---FLDML 631
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 227/493 (46%), Gaps = 39/493 (7%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP V+F +I LC + R+ EA E+V M G P T NAL+ G+C + AV
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
L D+M G PNE TY ++ ++C + A ++ +M Y+ I
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
++ A +F+ M +G D++ Y +I FC G + ++ + +++ I PD V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
+SALI +G L EA +L EM++ +SP TYT L+ +C + A H+ D M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
+G P++ TFN LI+G C +D+ L + R M G+ D V+YNT++
Sbjct: 379 VSKGC--------GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVF 405
GFC++ +L+ A EL EM + + D +Y+ L++GL D G +K
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD-------------NGEPEKAL 477
Query: 406 KLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
++ ++ ++ D + I+G+ + A + + P Y+ +I
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG--VKPDVKTYNIMIG 535
Query: 466 NCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNK 525
GL K +G ++EA + +M P+G YN+LI H G+ K
Sbjct: 536 -----------GLCK----KGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 526 AYEMYKEMVHYGF 538
+ ++ +E+ GF
Sbjct: 581 SAKLIEEIKRCGF 593
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/528 (24%), Positives = 238/528 (45%), Gaps = 53/528 (10%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
++A ++ +EM R P ++ L + + + ++L QM ++G++ N T +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 127 IDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
I+ C L A+ ++I G+ P T++ I RV +AL + M E G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
P L++ NA+++ C +G++ A+ + VE G P++VTY +++ +C G A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
L +M + Y+ ++ C G AF+L +EM +GF D +I +
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIII--------Y 285
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
LI G C R D+ +LR M + ++PD V+++ ++ F + +L++A EL EM +
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 366 KIIWLDEYTYESLMEGLSDE----------------------VTYSSLLNDYFAQGNMQK 403
+ I D TY SL++G E T++ L+N Y +
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 404 VFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTL 463
+L R+M+ G + D+VT I G + +AK + M+S + P + Y L
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR--VRPDIVSYKIL 463
Query: 464 IEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM-------------------SV 503
++ C E + A+ + + + + I + +H M V
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
KPD YN++I C++G++++A ++++M G P+ + LI A
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 189/386 (48%), Gaps = 22/386 (5%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEE 68
V+ +++I G CK+ + F L + ++ + +I+ C R ++
Sbjct: 248 VKYSIIIDGL-------CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
+++R+M ++ + PD ++ALI K + A EL+ +M RG+SP+ TY SLID
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 129 LLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
C LDKA + + M++ G P++ T+N I Y + ++ L +F M+ RG+
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D V+YN +I FC+ G+LE A E+ E V + + PD V+Y L+ LC G +A ++F
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIF 480
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
++ + + Y +++ C + A+ L + +G PD + T+N
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD--------VKTYNI 532
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
+I GLC + EA + R M E G SP+ +YN ++ + K+ +L E+
Sbjct: 533 MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG 592
Query: 368 IWLDEYTYESLMEGLSDEVTYSSLLN 393
+D T + +++ LSD S L+
Sbjct: 593 FSVDASTVKMVVDMLSDGRLKKSFLD 618
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 193/440 (43%), Gaps = 49/440 (11%)
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
D A +F EM S P + +++ + +++ + L + M +G++ +L + + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
I+ C+ +L A + ++ G PD VT+S LI LCL+G + EA +L M+
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
P+ T L+ CL G+ S A L D M GF P+ VT+ ++ +C
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGF--------QPNEVTYGPVLKVMCKS 225
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
+ A+ +LR M E + DAV Y+ ++ G C+ L A+ L EM+ K D Y
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIY 285
Query: 376 ESLMEGL----------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
+L+ G D V +S+L++ + +G +++ +L +EM +
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 414 NGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEF 472
G PD+VT I+G K+ A +L M+S C P+ ++ LI C
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC--GPNIRTFNILINGYCKANLI 403
Query: 473 KSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
+ L + S RG+V D YN LI C G + A E+++E
Sbjct: 404 DDGLELFRKMSLRGVV----------------ADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 533 MVHYGFFPHMFSVLSLIHAL 552
MV P + S L+ L
Sbjct: 448 MVSRRVRPDIVSYKILLDGL 467
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 155/329 (47%), Gaps = 50/329 (15%)
Query: 8 LKSFR-HMVRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKEL 60
+K F+ ++ +IRGF C + + LLR + P +V+F +I
Sbjct: 275 IKGFKADIIIYTTLIRGF-------CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 61 CEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNE 120
++ ++ EA+E+ +EM ++G++PD TY +LI G CK + A + D M +G PN
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNI 387
Query: 121 RTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSA 179
RT+ LI+ C L D ++F +M G + TYN I + ++E A +F
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEI------------------------KAET 215
M R + PD+VSY ++ C +GE EKALEI A
Sbjct: 448 MVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASK 507
Query: 216 VE-----------KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
V+ KG+ PD TY+ +I LC +GSL EA LF +M SP+ TY
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
L+ A+ G+ + + L +E++ GF D
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVD 596
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 46/262 (17%)
Query: 32 CKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CKE ++ + +L + P + +F +I C+ +++ E+ R+M+ +G+ D
Sbjct: 363 CKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADT 422
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-------------- 131
TYN LI G C++ + A EL+ +M R + P+ +Y L+D LC
Sbjct: 423 VTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK 482
Query: 132 ----------------------TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
+D A+ +F + G P V TYN I
Sbjct: 483 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
+ +A +F M E G SP+ +YN +I +G+ K+ ++ E G D T
Sbjct: 543 LSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKM 602
Query: 230 LIQALCLQGSLPEAFDLFLEML 251
++ L G L ++ FL+ML
Sbjct: 603 VVDMLS-DGRLKKS---FLDML 620
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 151/563 (26%), Positives = 255/563 (45%), Gaps = 64/563 (11%)
Query: 8 LKSFRH-MVRMNVMIRGFATESVMSCKEKKVGETFGLLRM------EPYLVSFKGVIKEL 60
L H M M +MI + C++KK+ F +L EP ++F ++
Sbjct: 98 LNGIEHDMYTMTIMINCY-------CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGF 150
Query: 61 CEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNE 120
C + R+ EA +V M PD T + LI G+C + A+ L D+M G P+E
Sbjct: 151 CLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDE 210
Query: 121 RTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSA 179
TY +++ LC A +F +M SV Y+ I + + AL +F+
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS 239
M +G+ D+V+Y+++I C DG+ + ++ E + + I+PD VT+SALI +G
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
L EA +L+ EM+ ++P TY L+ +C A + D M +G PD
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD------ 384
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
+VT++ LI+ C +RVD+ + + R + GL P+ ++YNT++ GFCQ +L A EL
Sbjct: 385 --IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 360 KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
EM + + TY L++GL D G + K ++ +M ++
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCD-------------NGELNKALEIFEKMQKS----- 484
Query: 420 SVTLG-----VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKS 474
+TLG + I+G+ + A + + S P + Y+ +I
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL--SDKGVKPDVVTYNVMIG--------- 533
Query: 475 AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
GL K +G ++EA + +M PD YN+LI H + + E+ +EM
Sbjct: 534 --GLCK----KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 535 HYGFFPHMFSVLSLIHALYYDRK 557
GF S + ++ + DR+
Sbjct: 588 VCGFSADS-STIKMVIDMLSDRR 609
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 182/345 (52%), Gaps = 9/345 (2%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
+V++ +I LC + ++ +++REM + + PD T++ALI K +L A ELY+
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 110 QMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
+M RG++P+ TY SLID C L +A ++F+ M++ G P + TY+ I +Y ++
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
RV+ + +F ++ +GL P+ ++YN ++ FCQ G+L A E+ E V +G+ P VTY
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
L+ LC G L +A ++F +M + ++ Y +++ C + A+ L + +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
G PD +VT+N +I GLC + EA + R M E G +PD +YN ++
Sbjct: 520 GVKPD--------VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHL 571
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLN 393
L + EL EM D T + +++ LSD S L+
Sbjct: 572 GGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLD 616
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 200/468 (42%), Gaps = 53/468 (11%)
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
Y + LS ER ++D+ ++ A +F MI S LP+ +N+ +A +
Sbjct: 28 YSSITEAKLSYKERLRNGIVDI----KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVART 83
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
++ + LG M G+ D+ + +I+ +C+ +L A + + G PD +T+
Sbjct: 84 KQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITF 143
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
S L+ CL+G + EA L M+ P T + L+ CL G S A L D M
Sbjct: 144 STLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE 203
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
GF PD VT+ +++ LC AL + R M E + V Y+ V+
Sbjct: 204 YGFQPDE--------VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSL 255
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL----------------------SDE 385
C+ A L EM+ K I D TY SL+ GL D
Sbjct: 256 CKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDV 315
Query: 386 VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR 445
VT+S+L++ + +G + + +L EM G PD++T I+G K+ A +
Sbjct: 316 VTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDL 375
Query: 446 MISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVK 504
M+S C P + Y LI + C + L ++ S++GL+
Sbjct: 376 MVSKGC--EPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI---------------- 417
Query: 505 PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
P+ YN L+ C+ G +N A E+++EMV G P + + L+ L
Sbjct: 418 PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/525 (24%), Positives = 227/525 (43%), Gaps = 48/525 (9%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
++ +A ++ M + P +N L + + + + M + G+ + T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 125 SLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
+I+ C L A+ V G+ P T++ + + RV +A+ + M E
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
PDLV+ + +I+ C G + +AL + VE G PD+VTY ++ LC G+ A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
DLF +M ++ S Y+ ++ + C G F A L +EM +G D +V
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD--------VV 281
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
T+++LI GLC+ + D+ +LR M + PD V+++ ++ F + +L +A EL EM
Sbjct: 282 TYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 364 DEKIIWLDEYTYESLMEGLSDE----------------------VTYSSLLNDYFAQGNM 401
+ I D TY SL++G E VTYS L+N Y +
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
+L RE++ G +P+++T + G + + AK + M+S PS + Y
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG--VPPSVVTYG 459
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
L++ GL + G +N+A E+M + +YN++I C
Sbjct: 460 ILLD-----------GLCDN----GELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 522 NVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIR 566
V+ A+ ++ + G P + + +I L SE + R
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFR 549
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/404 (29%), Positives = 203/404 (50%), Gaps = 25/404 (6%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N+++ F S +S +G+ L EP +V+F ++ C +R+ +A + +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGH-EPSIVTFGSLLNGFCRGDRVYDALYMFDQMV 178
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT--WWL 135
G P+ YN +I G+CK + + A++L ++M G+ P+ TY SLI LC+ W
Sbjct: 179 GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS 238
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
D A ++ + M P V T+N I A + RV +A + M R L PD+V+Y+ +
Sbjct: 239 D-ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
I C L++A E+ V KG PD VTYS LI C + LF EM + V
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
+ TYT L+ YC G+ ++A + M G P+++T+N L+HGLC
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCG--------VHPNIITYNVLLHGLCDN 409
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
++++AL IL M + G+ D V+YN ++ G C+ E+ A+++ ++ + + D +TY
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 376 ESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
++M GL + +G ++ L R+M +G LP+
Sbjct: 470 TTMMLGL-------------YKKGLRREADALFRKMKEDGILPN 500
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/421 (27%), Positives = 191/421 (45%), Gaps = 22/421 (5%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
E +L + L + ++ C ++ A + +M + G P T+ +L+ G C+
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATY 157
+ A+ ++DQM G PN Y ++ID LC + +D A + N M G P V TY
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
N I+ SS R A + S M +R + PD+ ++NA+I ++G + +A E E +
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSM 277
+ + PD VTYS LI LC+ L EA ++F M+ P TY+ L+ YC +
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 278 AFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
L EM RG + + VT+ LI G C +++ A I R M G+ P+
Sbjct: 345 GMKLFCEMSQRGVVRN--------TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFA 397
++YN +L G C +++KA + +M + +D +D VTY+ ++
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKN--GMD-----------ADIVTYNIIIRGMCK 443
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSY 457
G + + + + G +PD T + GL KK A + +M L Y
Sbjct: 444 AGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECY 503
Query: 458 I 458
+
Sbjct: 504 V 504
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 119/465 (25%), Positives = 214/465 (46%), Gaps = 43/465 (9%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R P + F ++ + + ++ + + +M G+ + T N L+ C+ + A
Sbjct: 76 RPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLA 135
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYK---VFNEMIASGFLPSVATYNKFI 161
+ +M G P+ T+ SL++ C D+ Y +F++M+ G+ P+V YN I
Sbjct: 136 LSFLGKMIKLGHEPSIVTFGSLLNGFCRG--DRVYDALYMFDQMVGMGYKPNVVIYNTII 193
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
S++V+ AL + + M + G+ PD+V+YN++IS C G A + + ++ I
Sbjct: 194 DGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
PD T++ALI A +G + EA + + EM+R + P TY+ L+Y C+ A +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
M +G PD +VT++ LI+G C ++V+ + + M + G+ + V+Y
Sbjct: 314 FGFMVSKGCFPD--------VVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYT 365
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM 401
++ G+C+ +L A E+ M + + TY L+ GL D G +
Sbjct: 366 ILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCD-------------NGKI 412
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
+K + +M +NG D VT + I G+ K + A I + + Q L MP Y
Sbjct: 413 EKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL-NCQGL-MPDIWTYT 470
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
T++ +GL K +GL EA +M + P+
Sbjct: 471 TMM-----------LGLYK----KGLRREADALFRKMKEDGILPN 500
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 197/441 (44%), Gaps = 47/441 (10%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
LD + +F M+ LPS+A +++ ++A ++ + + ++ M G+ +L + N
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+++ FC+ +L AL + ++ G P VT+ +L+ C + +A +F +M+
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P+ Y ++ C + A L + M G PD +VT+N+LI GLCS
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD--------VVTYNSLISGLCS 233
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
R +A ++ M + + PD ++N ++ + + +A E EM + + D T
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 375 YESLMEGLS----------------------DEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
Y L+ GL D VTYS L+N Y ++ KL EM+
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEF 472
+ G + ++VT + I G + ++A+ I RM+ C P+ I Y+ L+
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF--CGVHPNIITYNVLLH------- 404
Query: 473 KSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
GL + G + +A + M + D YN++I C+ G V A+++Y
Sbjct: 405 ----GLCDN----GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 533 MVHYGFFPHMFSVLSLIHALY 553
+ G P +++ +++ LY
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLY 477
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 153/344 (44%), Gaps = 57/344 (16%)
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
L ++ DLF M++ PS + ++RL+ A + ++ + +L ++M+ G +P
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG-IPH------ 114
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
+L T N L++ C ++ AL L M ++G P V++ ++L GFC+ + Y+
Sbjct: 115 -NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR---GDRVYDA 170
Query: 360 KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
D+ + M + V Y+++++ + L M ++G PD
Sbjct: 171 LYMFDQMV----------GMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPD 220
Query: 420 SVTLGVFINGLNKKATTSIAKGILLRMISSQCLT----MPSYIIYDTLIENCSYVEFKSA 475
VT I+GL S A RM+S C+T P ++ LI+ C
Sbjct: 221 VVTYNSLISGLCSSGRWSDAT----RMVS--CMTKREIYPDVFTFNALIDAC-------- 266
Query: 476 VGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVH 535
VK+ G V+EA +E M S+ PD Y+LLI+ C +++A EM+ MV
Sbjct: 267 ---VKE----GRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 536 YGFFPHMFSVLSLIHALYYDRKNSEMGW----------VIRNTL 569
G FP + + LI+ Y K E G V+RNT+
Sbjct: 320 KGCFPDVVTYSILING-YCKSKKVEHGMKLFCEMSQRGVVRNTV 362
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 144/512 (28%), Positives = 235/512 (45%), Gaps = 38/512 (7%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
R+ P S G++ + + ++ K ++M G P TYN +I MCK ++
Sbjct: 221 FRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEA 280
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A L+++M+ RGL P+ TY S+ID LD F EM P V TYN I
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALIN 340
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ ++ L + M GL P++VSY+ ++ FC++G +++A++ + G++P
Sbjct: 341 CFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVP 400
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
++ TY++LI A C G+L +AF L EML+ V + TYT L+ C A L
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
+M G +P+ L ++NALIHG + +D AL +L + G+ PD + Y T
Sbjct: 461 GKMDTAGVIPN--------LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++G C + +++ A + EM E I ++ + Y++L++ YF GN
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGI-------------KANSLIYTTLMDAYFKSGNPT 559
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
+ L EM VT V I+GL K S A R IS+ + I+
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR-ISNDFGLQANAAIFTA 618
Query: 463 LIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
+I+ GL KD V A E+M + PD Y L+ + ++GN
Sbjct: 619 MID-----------GLCKD----NQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGN 663
Query: 523 VNKAYEMYKEMVHYGFFPHMFSVLSLIHALYY 554
V +A + +M G + + SL+ L +
Sbjct: 664 VLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/404 (30%), Positives = 190/404 (47%), Gaps = 23/404 (5%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP ++++ +I C+ ++ E REM GL P+ +Y+ L+ CK M A++
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
Y MR GL PNE TY SLID C L A+++ NEM+ G +V TY I
Sbjct: 389 FYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ER+++A +F M G+ P+L SYNA+I F + +++ALE+ E +GI PD +
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y I LC + A + EM + ++ YT LM AY G + HL DEM
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL-RGMPEMGLSPDAVSYNTVL 344
+ + ++VTF LI GLC + V +A+ R + GL +A + ++
Sbjct: 569 KE--------LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
G C+ +++ A L +M +K + D Y SLM+G F QGN+ +
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG-------------NFKQGNVLEA 667
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMIS 448
L +M G D + + GL+ A+ L MI
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIG 711
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 185/377 (49%), Gaps = 21/377 (5%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P +VS+ ++ C++ M++A + +M R GL P+ TY +LI CK+ N+ A
Sbjct: 363 LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
L ++M G+ N TY +LID LC + +A ++F +M +G +P++A+YN I +
Sbjct: 423 RLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ ++ +++AL + + + RG+ PDL+ Y I C ++E A + E E GI +
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
+ Y+ L+ A G+ E L EM D+ + T+ L+ C S A +
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
+ + DF +Q + ++ F A+I GLC +V+ A + M + GL PD +Y +++
Sbjct: 603 ISN-----DFGLQANAAI--FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
G + + +A L+ +M E + LD Y SL+ GLS +QK
Sbjct: 656 DGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH-------------CNQLQKA 702
Query: 405 FKLEREMTRNGYLPDSV 421
EM G PD V
Sbjct: 703 RSFLEEMIGEGIHPDEV 719
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 180/375 (48%), Gaps = 28/375 (7%)
Query: 3 LLRATLKSFRHMVRMNVMIRGFATESVM--SCKEKKVGETFGL------LRMEPYLVSFK 54
+++ +K + M R+ ++ + S++ +CK + + F L + +E +V++
Sbjct: 382 MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYT 441
Query: 55 GVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVR 114
+I LC+ ERM+EA+E+ +M+ G+ P+ +YNALI G K +NM A+EL ++++ R
Sbjct: 442 ALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 501
Query: 115 GLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQA 173
G+ P+ Y + I LC+ ++ A V NEM G + Y + AY S +
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEG 561
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE-IKAETVEKGILPDDVTYSALIQ 232
L + M E + +V++ +I C++ + KA++ + + G+ + ++A+I
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
LC + A LF +M++ + P + YT LM G A L D+M G
Sbjct: 622 GLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKL 681
Query: 293 DFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
D L+ + +L+ GL ++ +A L M G+ PD V C I
Sbjct: 682 D--------LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV--------LC-ISV 724
Query: 353 LKKAYELKVEMDEKI 367
LKK YEL +DE +
Sbjct: 725 LKKHYELGC-IDEAV 738
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 174/415 (41%), Gaps = 45/415 (10%)
Query: 151 LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE 210
+P ++ + + +E+A+ FS M + P S N ++ +F + G+ +
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248
Query: 211 IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
+ + G P TY+ +I +C +G + A LF EM + P TY ++ +
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 271 LVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPE 330
VG +EM+ PD ++T+NALI+ C ++ L R M
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPD--------VITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 331 MGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSS 390
GL P+ VSY+T++ FC+ +++A + V+M + +EYTY SL++
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC------- 413
Query: 391 LLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQ 450
GN+ F+L EM + G + VT I+GL A+ + +M ++
Sbjct: 414 ------KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467
Query: 451 CLTMPSYIIYDTLIENCSYVEFKS---AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDG 507
+P+ Y+ LI +V+ K+ A+ L+ + RG +KPD
Sbjct: 468 --VIPNLASYNALIH--GFVKAKNMDRALELLNELKGRG----------------IKPDL 507
Query: 508 AVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMG 562
+Y I+ C + A + EM G + +L+ A Y+ N G
Sbjct: 508 LLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA-YFKSGNPTEG 561
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 38/271 (14%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEV 72
++ N +I GF M + + E G ++P L+ + I LC E++E AK V
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGR-GIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 73 VREMNRKGLAP-------------------------------DCE----TYNALICGMCK 97
+ EM G+ D E T+ LI G+CK
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 98 VRNMLCAVELYDQMRVR-GLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVA 155
+ + AV+ ++++ GL N + ++ID LC ++ A +F +M+ G +P
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT 649
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
Y + V +AL + MAE G+ DL++Y +++ +L+KA E
Sbjct: 650 AYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 709
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
+ +GI PD+V ++++ G + EA +L
Sbjct: 710 IGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 198/389 (50%), Gaps = 26/389 (6%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRN---M 101
+++P + +F VI LC+ +M +A++V+ +M G +P+ +YN LI G CK+ M
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 102 LCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK----AYKVFNEMIASGFLPSVATY 157
A + +M +SPN T+ LID +W D + KVF EM+ P+V +Y
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILID---GFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
N I + ++ +A+ + M G+ P+L++YNA+I+ FC++ L++AL++
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSM 277
+G +P Y+ LI A C G + + F L EM R + P TY L+ C G
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 278 AFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
A L D++ +G P LVTF+ L+ G C +A +L+ M +MGL P
Sbjct: 455 AKKLFDQLTSKGL---------PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRH 505
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMD-EKIIWLDEYTYESLMEGLSDEVTYSS---LLN 393
++YN V+ G+C+ LK A ++ +M+ E+ + ++ +Y L++G S + LLN
Sbjct: 506 LTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLN 565
Query: 394 DYFAQGNMQKVFKLE---REMTRNGYLPD 419
+ +G + E EM G++PD
Sbjct: 566 EMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 194/408 (47%), Gaps = 43/408 (10%)
Query: 141 VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC 200
V+ EMI P+V T+N I A + ++ +A + M G SP++VSYN +I +C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 201 Q---DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
+ +G++ KA + E VE + P+ T++ LI +LP + +F EML DV P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
+ +Y L+ C G+ S A + D+M G P+L+T+NALI+G C +
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGV--------QPNLITYNALINGFCKNDM 381
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
+ EAL + + G P YN ++ +C++ ++ + LK EM+ + I D TY
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 378 LMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTS 437
L+ GL GN++ KL ++T G LPD VT + + G +K +
Sbjct: 442 LIAGLC-------------RNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESR 487
Query: 438 IAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHE 496
A +LL+ +S L P ++ Y+ +++ C K+A + + E
Sbjct: 488 KA-AMLLKEMSKMGLK-PRHLTYNIVMKGYCKEGNLKAATNM-----------RTQMEKE 534
Query: 497 RMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFS 544
R M+V A YN+L+ + ++G + A + EM+ G P+ +
Sbjct: 535 RRLRMNV----ASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRIT 578
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 164/404 (40%), Gaps = 61/404 (15%)
Query: 160 FITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
+ AY ++ R E F G +S ++ ++ + E + +
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK 218
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV---GEFS 276
I P+ T++ +I ALC G + +A D+ +M SP+ +Y L+ YC + G+
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 277 MAFHLHDEMRHRGFLPDFVI---------------------------QFSPSLVTFNALI 309
A + EM P+ P+++++N+LI
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
+GLC+ ++ EA+ + M G+ P+ ++YN ++ GFC+ LK+A
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA------------- 385
Query: 370 LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
LD + + Y+ L++ Y G + F L+ EM R G +PD T I G
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 430 LNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVN 489
L + AK + ++ S +P + + L+E + +G
Sbjct: 446 LCRNGNIEAAKKLFDQLTSK---GLPDLVTFHILMEG---------------YCRKGESR 487
Query: 490 EAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
+AA+ + M M +KP YN+++ +C+ GN+ A M +M
Sbjct: 488 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 143/301 (47%), Gaps = 27/301 (8%)
Query: 4 LRATLKSFRHMVRMNVMIRGFATESVMS--CKEKKVGETFGL------LRMEPYLVSFKG 55
L ++K F+ M+ +V + S+++ C K+ E + ++P L+++
Sbjct: 312 LPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNA 371
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
+I C+ + ++EA ++ + +G P YN LI CK+ + L ++M G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 116 LSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
+ P+ TY LI LC ++ A K+F+++ + G LP + T++ + Y +A
Sbjct: 432 IVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAA 490
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE-TVEKGILPDDVTYSALIQA 233
+ M++ GL P ++YN V+ +C++G L+ A ++ + E+ + + +Y+ L+Q
Sbjct: 491 MLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG 550
Query: 234 LCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
+G L +A L EML + P+ TY + +EM +GF+PD
Sbjct: 551 YSQKGKLEDANMLLNEMLEKGLVPNRITYE----------------IVKEEMVDQGFVPD 594
Query: 294 F 294
Sbjct: 595 I 595
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 115/288 (39%), Gaps = 45/288 (15%)
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ AY F + F + G+ S ++ L+ L R + +
Sbjct: 159 LVLAYANNSRFELGFEAFKRSGYYGY--------KLSALSCKPLMIALLKENRSADVEYV 210
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS- 383
+ M + P+ ++N V+ C+ ++ KA ++ +M + G S
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK--------------VYGCSP 256
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLE---REMTRNGYLPDSVTLGVFINGLNKKATTSIAK 440
+ V+Y++L++ Y G K++K + +EM N P+ T + I+G K +
Sbjct: 257 NVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSM 316
Query: 441 GILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHN 500
+ M+ P+ I Y++LI G ++EA ++M +
Sbjct: 317 KVFKEMLDQD--VKPNVISYNSLING---------------LCNGGKISEAISMRDKMVS 359
Query: 501 MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP--HMFSVL 546
V+P+ YN LI C+ + +A +M+ + G P M+++L
Sbjct: 360 AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 228/493 (46%), Gaps = 39/493 (7%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP ++F +I LC + R+ EA E+V M G PD T N L+ G+C A+
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
L D+M G PN TY +++++C + A ++ +M Y+ I
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
++ A +F+ M +G++ ++++YN +I FC G + ++ + +++ I P+ V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
T+S LI + +G L EA +L EM+ ++P TYT L+ +C A + D M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
+G P++ TFN LI+G C R+D+ L + R M G+ D V+YNT++
Sbjct: 395 VSKG--------CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVF 405
GFC++ +L A EL EM + + + TY+ L++GL D G +K
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD-------------NGESEKAL 493
Query: 406 KLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
++ ++ ++ D + I+G+ + A + + P Y+ +I
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG--VKPGVKTYNIMIG 551
Query: 466 NCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNK 525
GL K +G ++EA + +M PDG YN+LI H G+ K
Sbjct: 552 -----------GLCK----KGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 526 AYEMYKEMVHYGF 538
+ ++ +E+ GF
Sbjct: 597 SVKLIEELKRCGF 609
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 199/425 (46%), Gaps = 37/425 (8%)
Query: 32 CKEKKVGETFGLL-RM-----EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C E +V E L+ RM +P L++ ++ LC + EA ++ +M G P+
Sbjct: 169 CLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNA 228
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNE 144
TY ++ MCK A+EL +M R + + Y +ID LC LD A+ +FNE
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M G ++ TYN I + ++ R + + M +R ++P++V+++ +I F ++G+
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L +A E+ E + +GI PD +TY++LI C + L +A + M+ P+ T+
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ YC L +M RG + D VT+N LI G C L +++ A +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVAD--------TVTYNTLIQGFCELGKLNVAKEL 460
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD 384
+ M + P+ V+Y +L G C E +KA E+ ++++ + LD Y ++ G+ +
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 385 EV----------------------TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
TY+ ++ +G + + L R+M +G+ PD T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWT 580
Query: 423 LGVFI 427
+ I
Sbjct: 581 YNILI 585
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 209/462 (45%), Gaps = 53/462 (11%)
Query: 114 RGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQA 173
R LS ER L+D+ D A +F +MI S LP+V +++ +A +++ +
Sbjct: 52 RNLSYRERLRSGLVDI----KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 107
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA 233
L + M +G++ +L + + +I+ FC+ +L A + ++ G P+ +T+S LI
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 234 LCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
LCL+G + EA +L M+ P T L+ CL G+ + A L D+M G
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC--- 224
Query: 294 FVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
P+ VT+ +++ +C + A+ +LR M E + DAV Y+ ++ G C+ L
Sbjct: 225 -----QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 354 KKAYELKVEMDEKIIWLDEYTYESLMEGLSDE----------------------VTYSSL 391
A+ L EM+ K I + TY L+ G + VT+S L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC 451
++ + +G +++ +L +EM G PD++T I+G K+ A ++ M+S C
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 452 LTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVY 510
P+ ++ LI C + L + S RG+V D Y
Sbjct: 400 --DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV----------------ADTVTY 441
Query: 511 NLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
N LI C G +N A E+++EMV P++ + L+ L
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 483
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 188/386 (48%), Gaps = 22/386 (5%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEE 68
V+ +++I G CK + F L + ++++ +I C R ++
Sbjct: 264 VKYSIIIDGL-------CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 316
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
+++R+M ++ + P+ T++ LI K + A EL+ +M RG++P+ TY SLID
Sbjct: 317 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Query: 129 LLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
C LDKA ++ + M++ G P++ T+N I Y + R++ L +F M+ RG+
Sbjct: 377 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 436
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D V+YN +I FC+ G+L A E+ E V + + P+ VTY L+ LC G +A ++F
Sbjct: 437 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
++ + + Y +++ C + A+ L + +G P + T+N
Sbjct: 497 EKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV--------KPGVKTYNI 548
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
+I GLC + EA + R M E G +PD +YN ++ + K+ +L E+
Sbjct: 549 MIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCG 608
Query: 368 IWLDEYTYESLMEGLSDEVTYSSLLN 393
+D T + +++ LSD S L+
Sbjct: 609 FSVDASTIKMVIDMLSDGRLKKSFLD 634
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 150/323 (46%), Gaps = 49/323 (15%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERM 66
+++ N++I GF C + + LLR + P +V+F +I ++ ++
Sbjct: 297 NIITYNILIGGF-------CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
EA+E+ +EM +G+APD TY +LI G CK ++ A ++ D M +G PN RT+ L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 127 IDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
I+ C +D ++F +M G + TYN I + ++ A +F M R +
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 186 SPDLVSYNAVISKFCQDGELEKALEI------------------------KAETVE---- 217
P++V+Y ++ C +GE EKALEI A V+
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 218 -------KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
KG+ P TY+ +I LC +G L EA LF +M +P TY L+ A+
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHL 589
Query: 271 LVGEFSMAFHLHDEMRHRGFLPD 293
G+ + + L +E++ GF D
Sbjct: 590 GDGDATKSVKLIEELKRCGFSVD 612
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P + +F +I C+ R+++ E+ R+M+ +G+ D TYN LI G C++ + A E
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC----------------------------------- 131
L+ +M R + PN TY L+D LC
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 132 -TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
+D A+ +F + G P V TYN I + +A +F M E G +PD
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+YN +I DG+ K++++ E G D T +I L G L ++ FL+M
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS-DGRLKKS---FLDM 635
Query: 251 L 251
L
Sbjct: 636 L 636
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 149/527 (28%), Positives = 246/527 (46%), Gaps = 54/527 (10%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC--AVELY 108
VS G+++ + + A V+ M ++G A + +N L+ G+C RN+ C AV L
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLC--RNLECGKAVSLL 165
Query: 109 DQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
+MR L P+ +Y ++I C L+KA ++ NEM SG S+ T+ I A+ +
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
++++A+G M GL DLV Y ++I FC GEL++ + E +E+G P +TY
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITY 285
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+ LI+ C G L EA ++F M+ V P+ TYT L+ C VG+ A L + M
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
+ P+ VT+N +I+ LC V +A+ I+ M + PD ++YN +L G
Sbjct: 346 K--------DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397
Query: 348 CQIRELKKAYELKVEM--DEKIIWLDEYTYESLMEGL----------------------S 383
C +L +A +L M D D +Y +L+ GL
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL 443
D VT + LLN G++ K +L ++++ + + +S T I+G K ++AKG+L
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 444 LRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSV 503
+M S+ PS Y NC L+ G +++A E M +
Sbjct: 518 CKMRVSE--LQPSVFDY-----NC----------LLSSLCKEGSLDQAWRLFEEMQRDNN 560
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIH 550
PD +N++I + G++ A + M G P +F+ LI+
Sbjct: 561 FPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 141/546 (25%), Positives = 245/546 (44%), Gaps = 59/546 (10%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKE 71
N++++G C+ + G+ LLR + P + S+ VI+ CE + +E+A E
Sbjct: 146 NILLKGL-------CRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALE 198
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
+ EM G + T+ LI CK M A+ +M+ GL + Y SLI C
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 132 TWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
LD+ +F+E++ G P TYN I + ++++A IF M ERG+ P++
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+Y +I C G+ ++AL++ +EK P+ VTY+ +I LC G + +A ++ M
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIH 310
+ P N TY L+ C G+ A L M D P ++++NALIH
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD------PDVISYNALIH 432
Query: 311 GLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWL 370
GLC R+ +AL I + E + D V+ N +L + ++ KA EL ++ + I
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492
Query: 371 DEYTYESLMEGLSDE----------------------VTYSSLLNDYFAQGNMQKVFKLE 408
+ TY ++++G Y+ LL+ +G++ + ++L
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 409 REMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCS 468
EM R+ PD V+ + I+G K A+ +L+ M S+ P Y LI
Sbjct: 553 EEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM--SRAGLSPDLFTYSKLINR-- 608
Query: 469 YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYE 528
F G ++EA ++M + +PD + + ++ +G +K E
Sbjct: 609 -------------FLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTE 655
Query: 529 MYKEMV 534
+ K++V
Sbjct: 656 LVKKLV 661
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 189/418 (45%), Gaps = 45/418 (10%)
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A+ + +M+ + + + + + Y+ + A G+ + M +RG + ++ ++N ++
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
C++ E KA+ + E ++PD +Y+ +I+ C L +A +L EM S
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
S T+ L+ A+C G+ A EM+ G D LV + +LI G C
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD--------LVVYTSLIRGFCDCGE 262
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
+D + + E G SP A++YNT++ GFC++ +LK+A E+ M E+ + + YTY
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322
Query: 378 LMEGL------------------SDE----VTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
L++GL DE VTY+ ++N G + ++ M +
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSA 475
PD++T + + GL K A +L M+ T P I Y+ LI
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH---------- 432
Query: 476 VGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
GL K+ +++A ++ + D N+L+ + G+VNKA E++K++
Sbjct: 433 -GLCKE----NRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 181/399 (45%), Gaps = 37/399 (9%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLL---RMEPYLVSFKGVIKELCEKERMEEAKE 71
+ N +IRGF + K+ E F + + P + ++ G+I LC + +EA +
Sbjct: 283 ITYNTLIRGFCKLGQL----KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
++ M K P+ TYN +I +CK + AVE+ + M+ R P+ TY L+ LC
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 132 TWW-LDKAYKVFNEMI--ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
LD+A K+ M+ +S P V +YN I R+ QAL I+ + E+ + D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
V+ N +++ + G++ KA+E+ + + I+ + TY+A+I C G L A L
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV------------- 295
+M ++ PS Y L+ + C G A+ L +EM+ PD V
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 296 --------------IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
SP L T++ LI+ L +DEA+ M + G PDA +
Sbjct: 579 DIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICD 638
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
+VL E K EL ++ +K I LD+ ++M+
Sbjct: 639 SVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMD 677
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 181/421 (42%), Gaps = 43/421 (10%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
L A VF + + SG + A N + + S E A + M E + VS +
Sbjct: 54 LKNAVSVFQQAVDSGSSLAFAG-NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSG 112
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
++ + Q + A + A +++G + ++ L++ LC +A L EM R
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
+ P +Y ++ +C E A L +EM+ G S SLVT+ LI C
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSG--------CSWSLVTWGILIDAFCK 224
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
++DEA+G L+ M MGL D V Y +++ GFC EL + L E+ E+
Sbjct: 225 AGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER-------- 276
Query: 375 YESLMEGLSD-EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
G S +TY++L+ + G +++ ++ M G P+ T I+GL
Sbjct: 277 ------GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 434 ATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAI 493
T A +L MI P+ + Y+ +I L KD GLV +A
Sbjct: 331 GKTKEALQLLNLMIEKD--EEPNAVTYNIIINK-----------LCKD----GLVADAVE 373
Query: 494 AHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFF--PHMFSVLSLIHA 551
E M +PD YN+L+ C +G++++A ++ M+ + P + S +LIH
Sbjct: 374 IVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHG 433
Query: 552 L 552
L
Sbjct: 434 L 434
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 36/206 (17%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
+ +A E+ ++++ + + +TY A+I G CK + A L +MRV L P+ Y
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 126 LIDLLCT-WWLDKAYKVFNEM-----------------------------------IASG 149
L+ LC LD+A+++F EM +G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 150 FLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKAL 209
P + TY+K I +L +++A+ F M + G PD ++V+ GE +K
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 210 EIKAETVEKGILPDDVTYSALIQALC 235
E+ + V+K I+ D ++ +C
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMC 680
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 147/543 (27%), Positives = 243/543 (44%), Gaps = 63/543 (11%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
+ ++PY+ + I + ++ ME+AK + M GL P + Y +LI G C+ +N+
Sbjct: 343 INIKPYM--YDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFIT 162
EL +M+ R + + TY +++ +C+ LD AY + EMIASG P+V Y I
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+L + R A+ + M E+G++PD+ YN++I + +++A E VE G+ P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ TY A I A EM V P+ T L+ YC G+ A +
Sbjct: 521 NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAY 580
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
M +G L D T+ L++GL ++VD+A I R M G++PD SY
Sbjct: 581 RSMVDQGILGD--------AKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVT-YSSLLNDYFAQGNM 401
++ GF ++ ++KA + EM E EGL+ V Y+ LL + G +
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVE--------------EGLTPNVIIYNMLLGGFCRSGEI 678
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT--MPSYII 459
+K +L EM+ G P++VT I+G K + A R+ L +P +
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA----FRLFDEMKLKGLVPDSFV 734
Query: 460 YDTLIENC----------------------SYVEFKSAVGLVKDFSTRGLVNEAAIAHER 497
Y TL++ C S F + + V F L E R
Sbjct: 735 YTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL---NR 791
Query: 498 MHNMSV----KPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALY 553
+ + S KP+ YN++I C+ GN+ A E++ +M + P + + SL++
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG-- 849
Query: 554 YDR 556
YD+
Sbjct: 850 YDK 852
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 226/497 (45%), Gaps = 50/497 (10%)
Query: 79 KGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDK 137
KGL P TY+ LI G+CK++ + A L +M G+S + TY LID LL D
Sbjct: 271 KGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADA 330
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A + +EM++ G Y+ I +E+A +F M GL P +Y ++I
Sbjct: 331 AKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIE 390
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
+C++ + + E+ E ++ I+ TY +++ +C G L A+++ EM+ P
Sbjct: 391 GYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP 450
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
+ YT L+ + F A + EM+ +G PD + +N+LI GL +R
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD--------IFCYNSLIIGLSKAKR 502
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE------KII--- 368
+DEA L M E GL P+A +Y + G+ + E A + EM E K++
Sbjct: 503 MDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTG 562
Query: 369 WLDEY-----------TYESLMEG--LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
++EY Y S+++ L D TY+ L+N F + ++ REM G
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKS 474
PD + GV ING +K A I M+ + LT P+ IIY+ L+ C E +
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMV-EEGLT-PNVIIYNMLLGGFCRSGEIEK 680
Query: 475 AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
A L+ + S +GL P+ Y +I +C+ G++ +A+ ++ EM
Sbjct: 681 AKELLDEMSVKGL----------------HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 535 HYGFFPHMFSVLSLIHA 551
G P F +L+
Sbjct: 725 LKGLVPDSFVYTTLVDG 741
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 131/517 (25%), Positives = 214/517 (41%), Gaps = 74/517 (14%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P + + +I L + +RM+EA+ + EM GL P+ TY A I G + A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 106 ELYDQMRVRGLSPNE--------------------RTYMSLID----------------L 129
+ +MR G+ PN+ Y S++D L
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 130 LCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
+D A ++F EM G P V +Y I + +++A IF M E GL+P++
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNV 662
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
+ YN ++ FC+ GE+EKA E+ E KG+ P+ VTY +I C G L EAF LF E
Sbjct: 663 IIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
M + P + YT L+ C + + A + + + S FNALI
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK---------GCASSTAPFNALI 773
Query: 310 HGLCSLERVDEALGILRGMPEMGLS----PDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
+ + + + +L + + P+ V+YN ++ C+ L+ A EL +M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 366 KIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGV 425
+LM + +TY+SLLN Y G ++F + E G PD + V
Sbjct: 834 A----------NLMPTV---ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSV 880
Query: 426 FINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTR 485
IN K+ T+ A ++ +M + +++ + + L+ F+
Sbjct: 881 IINAFLKEGMTTKALVLVDQMFAKNA------------VDDGCKLSISTCRALLSGFAKV 928
Query: 486 GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
G + A E M + PD A LI + C N
Sbjct: 929 GEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 127/509 (24%), Positives = 211/509 (41%), Gaps = 51/509 (10%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L + P L K ++ L R++ +V + M + + D +TY+ LI C+ N+
Sbjct: 180 LELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNV-- 237
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
Q+ L E+ + + T +D A K+ MI G +P TY+ I
Sbjct: 238 ------QLGKDVLFKTEKEFRT-----ATLNVDGALKLKESMICKGLVPLKYTYDVLIDG 286
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+R+E A + M G+S D +Y+ +I + + A + E V GI
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
Y I + +G + +A LF M+ + P Y L+ YC + L
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
EM+ R I SP T+ ++ G+CS +D A I++ M G P+ V Y T+
Sbjct: 407 EMKKRN------IVISP--YTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQK 403
+ F Q A + EM E+ I D + Y SL+ GLS M +
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS-------------KAKRMDE 505
Query: 404 VFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTL 463
EM NG P++ T G FI+G + + + A + M +C +P+ ++
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM--RECGVLPNKVL---- 559
Query: 464 IENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNV 523
C+ GL+ ++ +G V EA A+ M + + D Y +L+ + V
Sbjct: 560 ---CT--------GLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 524 NKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
+ A E+++EM G P +FS LI+
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGF 637
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 185/466 (39%), Gaps = 57/466 (12%)
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
G S D V + + + G +E+A+ + + ++ ++P L+ AL L
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMA----FHLHDEMRHRGFLPDFVIQFS 299
+D++ M+ +V TY L+ A+C G + F E R D ++
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 300 PSLV---------TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
S++ T++ LI GLC ++R+++A +L M +G+S D +Y+ ++ G +
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 351 RELKKAYELKVEMDEKIIWLDEYTY---------ESLME------------GLSDEV-TY 388
R A L EM I + Y Y E +ME GL + Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 389 SSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMIS 448
+SL+ Y + N+++ ++L EM + + T G + G+ A I+ MI+
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 449 SQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLV------NEAAIAHERMHNM 501
S C P+ +IY TLI+ F A+ ++K+ +G+ N I + M
Sbjct: 446 SGC--RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRM 503
Query: 502 -------------SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSL 548
+KP+ Y I + A + KEM G P+ L
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGL 563
Query: 549 IHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVLNEIEVKKCKID 594
I+ K E R+ + L D++ + VL K K+D
Sbjct: 564 INEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 133/296 (44%), Gaps = 22/296 (7%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEV 72
+++ N+++ GF + K K++ + + + P V++ +I C+ + EA +
Sbjct: 661 NVIIYNMLLGGFCRSGEIE-KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT 132
EM KGL PD Y L+ G C++ ++ A+ ++ + +G + + + +LI+
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALIN---- 774
Query: 133 WWLDKAYK------VFNEMIASGF----LPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
W+ K K V N ++ F P+ TYN I +E A +F M
Sbjct: 775 -WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE 242
L P +++Y ++++ + + G + + E + GI PD + YS +I A +G +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 243 AFDLFLEMLRGDVSP-----SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
A L +M + S ST L+ + VGE +A + + M ++PD
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 136/509 (26%), Positives = 250/509 (49%), Gaps = 42/509 (8%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R+ P + + +I LC+ +RM +A+++ EM + L P TYN LI G CK N +
Sbjct: 209 RIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 105 VELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
++ ++M+ + P+ T+ +L+ L ++ A V EM GF+P T++
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
Y S+E+ E ALG++ + G+ + + + +++ C++G++EKA EI + KG++P+
Sbjct: 329 YSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+V Y+ +I C +G L A M + + P + Y L+ +C +GE A +
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
+M+ +G SPS+ T+N LI G D+ IL+ M + G P+ VSY T+
Sbjct: 449 KMKLKG--------VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTL 500
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV-TYSSLLNDYFAQGNMQ 402
+ C+ +L +A +K +M+++ G+S +V Y+ L++ ++G ++
Sbjct: 501 INCLCKGSKLLEAQIVKRDMEDR--------------GVSPKVRIYNMLIDGCCSKGKIE 546
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
F+ +EM + G + VT I+GL+ S A+ +LL IS + L P Y++
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLE-ISRKGLK-PDVFTYNS 604
Query: 463 LIENCSYV-EFKSAVGLVKDFSTRGLVNEAAIAH--------------ERMHN-MSVKPD 506
LI + + + L ++ G+ H ER+ MS+KPD
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPD 664
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVH 535
VYN ++ + G++ KA+ + K+M+
Sbjct: 665 LLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 129/444 (29%), Positives = 210/444 (47%), Gaps = 41/444 (9%)
Query: 32 CKEKKVGETFGLLRME------PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CKE K+ + +L E P V + +I C K + A+ + M ++G+ PD
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNE 144
YN LI C++ M A + ++M+++G+SP+ TY LI + DK + + E
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M +G +P+V +Y I ++ +A + M +RG+SP + YN +I C G+
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+E A E ++KGI + VTY+ LI L + G L EA DL LE+ R + P TY
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ Y G L++EM+ G P+L T++ LI LC+ E ++
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSG--------IKPTLKTYHLLI-SLCTKEGIELT--- 652
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG--- 381
R EM L PD + YN VL + +++KA+ L+ +M EK I LD+ TY SL+ G
Sbjct: 653 ERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLK 712
Query: 382 ---------LSDEV----------TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
L DE+ TY+ ++ + + + REM G+L D
Sbjct: 713 VGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCI 772
Query: 423 LGVFINGLNKKATTSIAKGILLRM 446
++GL ++ + A+ ++ M
Sbjct: 773 GNELVSGLKEEWRSKEAEIVISEM 796
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 211/477 (44%), Gaps = 46/477 (9%)
Query: 88 YNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMI 146
Y I K+ ++ +EL+++M+ + P+ Y LID LC ++ A ++F+EM+
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML 241
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE 206
A LPS+ TYN I Y + E++ + M + P L+++N ++ + G +E
Sbjct: 242 ARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVE 301
Query: 207 KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLM 266
A + E + G +PD T+S L A ++ + V + T + L+
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILL 361
Query: 267 YAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILR 326
A C G+ A + +G +P+ VI +N +I G C + A +
Sbjct: 362 NALCKEGKIEKAEEILGREMAKGLVPNEVI--------YNTMIDGYCRKGDLVGARMKIE 413
Query: 327 GMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV 386
M + G+ PD ++YN ++ FC++ E++ A + +M ++G+S V
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMK--------------LKGVSPSV 459
Query: 387 -TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR 445
TY+ L+ Y + K F + +EM NG +P+ V+ G IN L K + A+ I+ R
Sbjct: 460 ETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ-IVKR 518
Query: 446 MISSQCLTMPSYIIYDTLIENC------------SYVEFKSAV--------GLVKDFSTR 485
+ + ++ P IY+ LI+ C S K + L+ S
Sbjct: 519 DMEDRGVS-PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577
Query: 486 GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHM 542
G ++EA + +KPD YN LI + GNV + +Y+EM G P +
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 205/486 (42%), Gaps = 60/486 (12%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A +L+ +R G+ P+ + L+D L+ T VF ++ S F PS Y K I
Sbjct: 128 AADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQ 187
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
A + V + L +F+ M + P + YN +I C+ + A ++ E + + +LP
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLP 247
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+TY+ LI C G+ ++F + M + PS T+ L+ G A ++
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 283 DEMRHRGFLPD---FVIQFS-------------------PSLVTFNA-----LIHGLCSL 315
EM+ GF+PD F I F S V NA L++ LC
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
++++A IL GL P+ V YNT++ G+C+ +L A +K+E EK
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA-RMKIEAMEK--------- 417
Query: 376 ESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
+G+ D + Y+ L+ + G M+ K +M G P T + I G +K
Sbjct: 418 ----QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKY 473
Query: 435 TTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIA 494
IL M + TMP+ + Y TLI NC + EA I
Sbjct: 474 EFDKCFDILKEMEDNG--TMPNVVSYGTLI-NC--------------LCKGSKLLEAQIV 516
Query: 495 HERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYY 554
M + V P +YN+LI C +G + A+ KEM+ G ++ + +LI L
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 555 DRKNSE 560
K SE
Sbjct: 577 TGKLSE 582
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 152/323 (47%), Gaps = 15/323 (4%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +VS+ +I LC+ ++ EA+ V R+M +G++P YN LI G C + A
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+M +G+ N TY +LID L T L +A + E+ G P V TYN I+ Y
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGF 611
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG-ELEKALEIKAETVEKGILPDDV 225
+ V++ + ++ M G+ P L +Y+ +IS ++G EL + L E + PD +
Sbjct: 612 AGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERL-----FGEMSLKPDLL 666
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y+ ++ + G + +AF+L +M+ + +TY L+ VG+ L DEM
Sbjct: 667 VYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEM 726
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
R + P T+N ++ G C ++ A R M E G D N ++
Sbjct: 727 NAR--------EMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVS 778
Query: 346 GFCQIRELKKAYELKVEMDEKII 368
G + K+A + EM+ +++
Sbjct: 779 GLKEEWRSKEAEIVISEMNGRML 801
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 184/437 (42%), Gaps = 46/437 (10%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+ +A +F + G PS + + + +++ + +F + E P Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
I + ++ K LE+ I P Y+ LI LC + +A LF EML
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
+ PS TY L+ YC G +F + + M+ PSL+TFN L+ GL
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKAD--------HIEPSLITFNTLLKGLFK 296
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA---YELKVEMDEKIIWLD 371
V++A +L+ M ++G PDA +++ + G+ + + A YE V+ K+
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKM---- 352
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK-LEREMTRNGYLPDSVTLGVFINGL 430
+ T S LLN +G ++K + L REM + G +P+ V I+G
Sbjct: 353 ------------NAYTCSILLNALCKEGKIEKAEEILGREMAK-GLVPNEVIYNTMIDGY 399
Query: 431 NKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNE 490
+K A+ + + + Q + P ++ Y NC L++ F G +
Sbjct: 400 CRKGDLVGAR-MKIEAMEKQGMK-PDHLAY-----NC----------LIRRFCELGEMEN 442
Query: 491 AAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIH 550
A +M V P YN+LI + R+ +K +++ KEM G P++ S +LI+
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 551 ALYYDRKNSEMGWVIRN 567
L K E V R+
Sbjct: 503 CLCKGSKLLEAQIVKRD 519
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/397 (30%), Positives = 198/397 (49%), Gaps = 24/397 (6%)
Query: 60 LCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPN 119
LC++ER++EA ++ EM +G +P YN LI G+CK ++ +L D M ++G PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 120 ERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
E TY +LI LC LDKA + M++S +P+ TY I + R A+ + S
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLS 351
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
+M ERG + Y+ +IS ++G+ E+A+ + + EKG P+ V YS L+ LC +G
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
EA ++ M+ P+ TY+ LM + G A + EM G
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG--------C 463
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
S + ++ LI GLC + RV EA+ + M +G+ PD V+Y++++ G C I + A +
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 359 LKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLP 418
L EM + + D VTY+ LL+ Q ++ + L M G P
Sbjct: 524 LYHEM----------LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573
Query: 419 DSVTLGVFINGLNKKATT-----SIAKGILLRMISSQ 450
D +T F+N L++K+ + S + +++R++ Q
Sbjct: 574 DVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQ 610
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 208/480 (43%), Gaps = 42/480 (8%)
Query: 81 LAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAY 139
++P+ ++N +I +CK+R + A+E++ M R P+ TY +L+D LC +D+A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 140 KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
+ +EM + G PS YN I + + + M +G P+ V+YN +I
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 200 CQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
C G+L+KA+ + V +P+DVTY LI L Q +A L M +
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQ 362
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVD 319
Y+ L+ G+ A L +M +G P++V ++ L+ GLC + +
Sbjct: 363 HIYSVLISGLFKEGKAEEAMSLWRKMAEKG--------CKPNIVVYSVLVDGLCREGKPN 414
Query: 320 EALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
EA IL M G P+A +Y++++ GF + ++A ++ EMD+ +++ Y L+
Sbjct: 415 EAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLI 474
Query: 380 EGL----------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREM---TRN 414
+GL D V YSS++ G+M KL EM
Sbjct: 475 DGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEP 534
Query: 415 GYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKS 474
PD VT + ++GL + S A +L M+ C P I +T + S
Sbjct: 535 KSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC--DPDVITCNTFLNTLSEKSNSC 592
Query: 475 AVG------LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYE 528
G LV R V+ A E M + P + + +++ + C+ +N A +
Sbjct: 593 DKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 183/425 (43%), Gaps = 69/425 (16%)
Query: 163 AYLSSERVEQALGIFSAMA-ERGLSPDLVSYNAVISKFCQDGELEKALE----IKAETVE 217
AY + ++A+ +F M E + S+N+V++ +G + LE + +
Sbjct: 121 AYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMN 180
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSM 277
I P+ ++++ +I+ALC + A ++F M P TY LM C
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 278 AFHLHDEMRHRGFLPDFVI---------------------------QFSPSLVTFNALIH 310
A L DEM+ G P VI P+ VT+N LIH
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 311 GLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWL 370
GLC ++D+A+ +L M P+ V+Y T++ G + R A L M+E+ L
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 371 DEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL 430
+++ Y L+ GL F +G ++ L R+M G P+ V V ++GL
Sbjct: 361 NQHIYSVLISGL-------------FKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL 407
Query: 431 NKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE---------------------NCSY 469
++ + AK IL RMI+S CL P+ Y +L++ CS
Sbjct: 408 CREGKPNEAKEILNRMIASGCL--PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 470 VEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEM 529
+F +V L+ G V EA + +M + +KPD Y+ +I C G+++ A ++
Sbjct: 466 NKFCYSV-LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 530 YKEMV 534
Y EM+
Sbjct: 525 YHEML 529
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 189/448 (42%), Gaps = 52/448 (11%)
Query: 141 VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC 200
V N + P+ ++N I A V++A+ +F M ER PD +Y ++ C
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
++ +++A+ + E +G P V Y+ LI LC +G L L M P+
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
TY L++ CL G+ A L + M +P+ VT+ LI+GL R +
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND--------VTYGTLINGLVKQRRATD 345
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
A+ +L M E G + Y+ ++ G + + ++A L +M EK + Y L++
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 381 GLSDE----------------------VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLP 418
GL E TYSSL+ +F G ++ ++ +EM + G
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 419 DSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTM---PSYIIYDTLIEN-CSYVEFKS 474
+ V I+GL + + M+ S+ LT+ P + Y ++I+ C +
Sbjct: 466 NKFCYSVLIDGL-----CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDA 520
Query: 475 AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
A+ L + L E + +PD YN+L+ C + ++++A ++ M+
Sbjct: 521 ALKLYHEM----LCQEEPKS---------QPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 535 HYGFFPHMFSVLSLIHALYYDRKNSEMG 562
G P + + + ++ L + + G
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSNSCDKG 595
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 147/555 (26%), Positives = 242/555 (43%), Gaps = 54/555 (9%)
Query: 11 FRHMVRMNVMIRGFATESVMSC---KEKKVGETFGLLRM------EPYLVSFKGVIKELC 61
F + +R + T S + C +K++G +L M P F ++ C
Sbjct: 324 FLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYC 383
Query: 62 EKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNML------CAVELYDQMRVRG 115
A +++++M + G P YN LI +C ++ L A + Y +M G
Sbjct: 384 TSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAG 443
Query: 116 LSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
+ N+ S LC+ +KA+ V EMI GF+P +TY+K + ++ ++E A
Sbjct: 444 VVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
+F M GL D+ +Y ++ FC+ G +E+A + E E G P+ VTY+ALI A
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 235 CLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDF 294
+ A +LF ML P+ TY+ L+ +C G+ A + + M +PD
Sbjct: 564 LKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDV 623
Query: 295 VIQFS--------PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
+ F P++VT+ AL+ G C RV+EA +L M G P+ + Y+ ++ G
Sbjct: 624 DMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDG 683
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK 406
C++ +L +A E+K EM E Y TYSSL++ YF K
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLY-------------TYSSLIDRYFKVKRQDLASK 730
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
+ +M N P+ V I+GL K T A ++ M C P+ + Y +I+
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC--QPNVVTYTAMIDG 788
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
F G + ERM + V P+ Y +LI C+ G ++ A
Sbjct: 789 ---------------FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 527 YEMYKEMVHYGFFPH 541
+ + +EM + H
Sbjct: 834 HNLLEEMKQTHWPTH 848
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/571 (23%), Positives = 243/571 (42%), Gaps = 42/571 (7%)
Query: 17 MNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREM 76
+NV++R S +++G R P ++ +I+ + +R++ A + REM
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGR-LKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREM 261
Query: 77 NRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL- 135
+ L D T +CKV A+ L + P+ Y LI LC L
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLF 318
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
++A N M A+ LP+V TY+ + L+ +++ + + + M G P +N++
Sbjct: 319 EEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSL 378
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS------LPEAFDLFLE 249
+ +C G+ A ++ + V+ G +P V Y+ LI ++C L A + E
Sbjct: 379 VHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSE 438
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
ML V + + C G++ AF + EM +GF+PD T++ ++
Sbjct: 439 MLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPD--------TSTYSKVL 490
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
+ LC+ +++ A + M GL D +Y ++ FC+ +++A + EM E
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE---- 546
Query: 370 LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
+ + VTY++L++ Y + +L M G LP+ VT I+G
Sbjct: 547 ---------VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 430 LNKKATTSIAKGILLRMISSQCLTMPS----YIIYDTLIENCSYVEFKSAVGLVKDFSTR 485
K A I RM S+ +P + YD E + V + + L+ F
Sbjct: 598 HCKAGQVEKACQIFERMCGSK--DVPDVDMYFKQYDDNSERPNVVTYGA---LLDGFCKS 652
Query: 486 GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSV 545
V EA + M +P+ VY+ LI C+ G +++A E+ EM +GF +++
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 546 LSLIHALYYDRKNSEMGWVIRNTLR-SCNLN 575
SLI + ++ V+ L SC N
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 193/414 (46%), Gaps = 49/414 (11%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCE----------------TYNAL 91
P +V++ +I C+ ++E+A ++ M PD + TY AL
Sbjct: 586 PNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGAL 645
Query: 92 ICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGF 150
+ G CK + A +L D M + G PN+ Y +LID LC LD+A +V EM GF
Sbjct: 646 LDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Query: 151 LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE 210
++ TY+ I Y +R + A + S M E +P++V Y +I C+ G+ ++A +
Sbjct: 706 PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 765
Query: 211 IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
+ EKG P+ VTY+A+I + G + +L M V+P+ TY L+ C
Sbjct: 766 LMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCC 825
Query: 271 LVGEFSMAFHLHDEMRH--------------RGFLPDFVIQF-----------SPSLVTF 305
G +A +L +EM+ GF +F+ +P L +
Sbjct: 826 KNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVY 885
Query: 306 NALIHGLCSLERVDEALGILRGMPEMG--LSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
LI L +R++ AL +L + L + +YN+++ C +++ A++L EM
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945
Query: 364 DEKIIWLDEYTYESLMEGL--SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
+K + + ++ SL++GL + +++ + LL D+ + +Q + E + T +G
Sbjct: 946 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQWI---EEKKTSDG 996
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 212/448 (47%), Gaps = 29/448 (6%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +++F +I LC + R+ EA +V +M KGL D TY ++ GMCK+ + A+
Sbjct: 222 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
L +M + P+ Y ++ID LC A +F+EM+ G P+V TYN I +
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S R A + M ER ++PD++++NA+IS ++G+L +A ++ E + + I PD
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+++I C +A +F M SP T+ ++ YC L E
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
+ RG + + T+N LIHG C ++ ++ A + + M G+ PD ++ N +L
Sbjct: 458 ISRRGLVAN--------TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
+GFC+ +L++A EL + I LD Y ++ G+ + +
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC-------------KGSKVDEA 556
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
+ L + +G PD T V I+G K+ S A + +M + P Y+TLI
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG--HEPDNSTYNTLI 614
Query: 465 ENCSYV-EFKSAVGLVKDFSTRGLVNEA 491
C E ++ L+ + + G +A
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 137/525 (26%), Positives = 241/525 (45%), Gaps = 62/525 (11%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMC---KVRNM 101
R+ + SF +IK C+ ++ + ++ + G PD T+N L+ G+C ++
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 102 LC------------AVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIAS 148
L AV L+DQM GL+P T+ +LI+ LC + +A + N+M+
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
G V TY + + AL + S M E + PD+V Y+A+I + C+DG A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
+ +E +EKGI P+ TY+ +I C G +A L +M+ +++P T+ L+ A
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
G+ A L DEM HR PD VT+N++I+G C R D+A + M
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPD--------TVTYNSMIYGFCKHNRFDDA----KHM 423
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTY 388
++ SPD V++NT++ +C+ + + DE + L E + L +++ TY
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRV----------DEGMQLLREISRRGL---VANTTTY 470
Query: 389 SSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL--NKKATTSIAKGILLRM 446
++L++ + N+ L +EM +G PD++T + + G N+K ++ +++M
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 447 ISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
S I DT+ N ++ V+EA + V+PD
Sbjct: 531 ---------SKIDLDTVAYNI----------IIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
YN++I C + ++ A ++ +M G P + +LI
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 160/340 (47%), Gaps = 13/340 (3%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P + ++ +I C R +A+ ++R+M + + PD T+NALI K + A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+L D+M R + P+ TY S+I C D A +F+ M + P V T+N I Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVY 442
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
++RV++ + + ++ RGL + +YN +I FC+ L A ++ E + G+ PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
+T + L+ C L EA +LF + + Y +++ C + A+ L
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
+ G PD + T+N +I G C + +A + M + G PD +YNT++
Sbjct: 563 LPIHGVEPD--------VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD 384
G + E+ K+ EL EM D +T + + + ++D
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITD 654
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 195/464 (42%), Gaps = 68/464 (14%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
LD A F+ M+ S + NK I ++ R + A+ ++ M R + ++ S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL------ 248
+I FC +L +L + + G PD VT++ L+ LCL+ + EA LF
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 249 ---------EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
+M+ ++P T+ L+ CL G A L ++M +G D
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID------ 260
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
+VT+ +++G+C + AL +L M E + PD V Y+ ++ C+ A L
Sbjct: 261 --VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 360 KVEMDEKIIWLDEYTYESLMEGL----------------------SDEVTYSSLLNDYFA 397
EM EK I + +TY +++G D +T+++L++
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSY 457
+G + + KL EM PD+VT I G K AK + M S P
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS------PDV 432
Query: 458 IIYDTLIE-NCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFD 516
+ ++T+I+ C + L+++ S RGLV + YN LI
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLV----------------ANTTTYNTLIHG 476
Query: 517 HCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSE 560
C N+N A ++++EM+ +G P + L++ + K E
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 44/297 (14%)
Query: 11 FRHMVRMNVMIRGFATESVMSCKEKKVGETFGL--LRMEPYLVSFKGVIKELCEKERMEE 68
F V N MI GF CK + + + L P +V+F +I C +R++E
Sbjct: 398 FPDTVTYNSMIYGF-------CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
+++RE++R+GL + TYN LI G C+V N+ A +L+ +
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE------------------ 492
Query: 129 LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
MI+ G P T N + + +E++E+AL +F + + D
Sbjct: 493 ----------------MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
V+YN +I C+ ++++A ++ G+ PD TY+ +I C + ++ +A LF
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD-FVIQFSPSLVT 304
+M P NSTY L+ GE + L EMR GF D F I+ L+T
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLIT 653
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLL------RMEPYLVSFKGVIKELCEKERMEE 68
V N++I G CK KV E + L +EP + ++ +I C K + +
Sbjct: 538 VAYNIIIHGM-------CKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A + +M G PD TYN LI G K + ++EL +MR G S + T + D
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD 650
Query: 129 LLCTWWLDKAY 139
L+ LDK++
Sbjct: 651 LITDGRLDKSF 661
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 140/506 (27%), Positives = 234/506 (46%), Gaps = 33/506 (6%)
Query: 59 ELCEKER-MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLS 117
E C KER +E + ++M G+AP T+N LI +C + A EL+D+M +G
Sbjct: 120 ESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCK 179
Query: 118 PNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGI 176
PNE T+ L+ C L DK ++ N M + G LP+ YN ++++ R + + +
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKM 239
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL----PDDVTYSALIQ 232
M E GL PD+V++N+ IS C++G++ A I ++ L P+ +TY+ +++
Sbjct: 240 VEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
C G L +A LF + D S +Y + G+F A + +M +G
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG--- 356
Query: 293 DFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
PS+ ++N L+ GLC L + +A I+ M G+ PDAV+Y +L G+C + +
Sbjct: 357 -----IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGK 411
Query: 353 LKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
+ A L EM + YT L+ L + G + + +L R+M
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSL-------------WKMGRISEAEELLRKMN 458
Query: 413 RNGYLPDSVTLGVFINGLNKKA----TTSIAKGILLRMISSQCLTMPSYI--IYDTLIEN 466
GY D+VT + ++GL I KG+ + ++ SYI + D+LIEN
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIEN 518
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
+ + L+ G EA M ++PD YN+ I C++G ++ A
Sbjct: 519 NCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA 578
Query: 527 YEMYKEMVHYGFFPHMFSVLSLIHAL 552
+ + K+M G + + SLI L
Sbjct: 579 FRVLKDMEKKGCHKSLETYNSLILGL 604
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 239/564 (42%), Gaps = 83/564 (14%)
Query: 43 LLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNML 102
L + P +F +I+ LC+ ++ A+E+ EM KG P+ T+ L+ G CK
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 103 CAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFI 161
+EL + M G+ PN+ Y +++ C D + K+ +M G +P + T+N I
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 162 TAYLSSERVEQALGIFSAMAER---GLS-PDLVSYNAVISKFCQDGELEKALE------- 210
+A +V A IFS M GL P+ ++YN ++ FC+ G LE A
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 211 -----------------------IKAETV-----EKGILPDDVTYSALIQALCLQGSLPE 242
I+AETV +KGI P +Y+ L+ LC G L +
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 243 AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSL 302
A + M R V P TY L++ YC VG+ A L EM LP+
Sbjct: 380 AKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN--------A 431
Query: 303 VTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVE 362
T N L+H L + R+ EA +LR M E G D V+ N ++ G C EL KA E+
Sbjct: 432 YTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKG 491
Query: 363 M------------DEKIIWLDEYTYESLMEG--LSDEVTYSSLLNDYFAQGNMQKVFKLE 408
M + I +D +SL+E L D +TYS+LLN G + L
Sbjct: 492 MRVHGSAALGNLGNSYIGLVD----DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 409 REMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCS 468
EM PDSV +FI+ K+ S A +L M C S Y++LI
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGC--HKSLETYNSLILG-- 603
Query: 469 YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYE 528
+ K+ + F GL++E M + P+ YN I C V A
Sbjct: 604 -LGIKNQI-----FEIHGLMDE-------MKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Query: 529 MYKEMVHYGFFPHMFSVLSLIHAL 552
+ EM+ P++FS LI A
Sbjct: 651 LLDEMMQKNIAPNVFSFKYLIEAF 674
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 218/481 (45%), Gaps = 60/481 (12%)
Query: 15 VRMNVMIRGFATESVMSCKE---KKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKE 71
+ N+M++GF ++ + + + E L ++ Y + +G+++ + EA+
Sbjct: 292 ITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH----GKFIEAET 347
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
V+++M KG+ P +YN L+ G+CK+ + A + M+ G+ P+ TY L+ C
Sbjct: 348 VLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYC 407
Query: 132 T-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
+ +D A + EM+ + LP+ T N + + R+ +A + M E+G D V
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 191 SYNAVISKFCQDGELEKALEI-----------------------KAETVEKGILPDDVTY 227
+ N ++ C GEL+KA+EI +E LPD +TY
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
S L+ LC G EA +LF EM+ + P + Y ++ +C G+ S AF + +M
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEK 587
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
+G SL T+N+LI GL ++ E G++ M E G+SP+ +YNT +
Sbjct: 588 KGC--------HKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL---------------------SDEV 386
C+ +++ A L EM +K I + ++++ L+E E
Sbjct: 640 CEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG 699
Query: 387 TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
YS + N+ A G + K +L + G+ + + L KK +A GIL +M
Sbjct: 700 LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKM 759
Query: 447 I 447
I
Sbjct: 760 I 760
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 182/441 (41%), Gaps = 85/441 (19%)
Query: 135 LDKAYKVFNEMIASGF---LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+DKA+ F +++ S F PSV YN + + + RVE ++ M G++P +
Sbjct: 91 IDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYT 149
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
+N +I C ++ A E+ E EKG P++ T+ L++ C G + +L M
Sbjct: 150 FNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAME 209
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
V P+ Y ++ ++C G + + ++MR G + P +VTFN+ I
Sbjct: 210 SFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLV--------PDIVTFNSRISA 261
Query: 312 LCSLERVDEALGILRGMP---EMGLS-PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
LC +V +A I M +GL P++++YN +L GFC++ L+ A L
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL-------- 313
Query: 368 IWLDEYTYESLMEG--LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGV 425
+ES+ E L+ +Y+ L G + + ++MT G P + +
Sbjct: 314 -------FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 426 FINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTR 485
++GL K S AK I VGL+K
Sbjct: 367 LMDGLCKLGMLSDAKTI---------------------------------VGLMK----- 388
Query: 486 GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSV 545
V PD Y L+ +C G V+ A + +EM+ P+ ++
Sbjct: 389 --------------RNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTC 434
Query: 546 LSLIHALYYDRKNSEMGWVIR 566
L+H+L+ + SE ++R
Sbjct: 435 NILLHSLWKMGRISEAEELLR 455
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/388 (26%), Positives = 167/388 (43%), Gaps = 47/388 (12%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG---LSPNER 121
R+ EA+E++R+MN KG D T N ++ G+C + A+E+ MRV G L
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 122 TYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMA 181
+Y+ L+D + +I + LP + TY+ + + R +A +F+ M
Sbjct: 506 SYIGLVD--------------DSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM 551
Query: 182 ERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLP 241
L PD V+YN I FC+ G++ A + + +KG TY++LI L ++ +
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 242 EAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
E L EM +SP+ TY + C + A +L DEM + +P+
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK--------NIAPN 663
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
+ +F LI C + D A + + + + Y+ + +L KA EL
Sbjct: 664 VFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL-YSLMFNELLAAGQLLKATELLE 722
Query: 362 EMDEKIIWLDEYTYESLMEGL--SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
+ ++ L + Y+ L+E L DE+ +S G + K M GY D
Sbjct: 723 AVLDRGFELGTFLYKDLVESLCKKDELEVAS--------GILHK-------MIDRGYGFD 767
Query: 420 SVTLGVFINGL----NKKATTSIAKGIL 443
L I+GL NKK S A ++
Sbjct: 768 PAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 105/236 (44%), Gaps = 15/236 (6%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR-MEP-----YLVSFKGVIKELCEKERMEE 68
V N+ I F CK+ K+ F +L+ ME L ++ +I L K ++ E
Sbjct: 560 VAYNIFIHHF-------CKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
++ EM KG++P+ TYN I +C+ + A L D+M + ++PN ++ LI+
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672
Query: 129 LLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
C D A +VF E S Y+ L++ ++ +A + A+ +RG
Sbjct: 673 AFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
Y ++ C+ ELE A I + +++G D +I L G+ EA
Sbjct: 732 GTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 124/448 (27%), Positives = 212/448 (47%), Gaps = 29/448 (6%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +++F +I LC + R+ EA +V +M KGL D TY ++ GMCK+ + A+
Sbjct: 222 LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 281
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
L +M + P+ Y ++ID LC A +F+EM+ G P+V TYN I +
Sbjct: 282 NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 341
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S R A + M ER ++PD++++NA+IS ++G+L +A ++ E + + I PD
Sbjct: 342 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 401
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+++I C +A +F M SP T+ ++ YC L E
Sbjct: 402 VTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 457
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
+ RG + + T+N LIHG C ++ ++ A + + M G+ PD ++ N +L
Sbjct: 458 ISRRGLVAN--------TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILL 509
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
+GFC+ +L++A EL + I LD Y ++ G+ + +
Sbjct: 510 YGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC-------------KGSKVDEA 556
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
+ L + +G PD T V I+G K+ S A + +M + P Y+TLI
Sbjct: 557 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG--HEPDNSTYNTLI 614
Query: 465 ENC-SYVEFKSAVGLVKDFSTRGLVNEA 491
C E ++ L+ + + G +A
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDA 642
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 134/525 (25%), Positives = 241/525 (45%), Gaps = 62/525 (11%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMC---KVRNM 101
R+ + SF +IK C+ ++ + ++ + G PD T+N L+ G+C ++
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 102 LC------------AVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIAS 148
L AV L+DQM GL+P T+ +LI+ LC + +A + N+M+
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
G V TY + + AL + S M E + PD+V Y+A+I + C+DG A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
+ +E +EKGI P+ TY+ +I C G +A L +M+ +++P T+ L+ A
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
G+ A L DEM HR PD VT+N++I+G C R D+A + M
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPD--------TVTYNSMIYGFCKHNRFDDA----KHM 423
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTY 388
++ SPD V++NT++ +C+ + + + +L E+ + + +++ TY
Sbjct: 424 FDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL-------------VANTTTY 470
Query: 389 SSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL--NKKATTSIAKGILLRM 446
++L++ + N+ L +EM +G PD++T + + G N+K ++ +++M
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 447 ISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
S I DT+ N ++ V+EA + V+PD
Sbjct: 531 ---------SKIDLDTVAYNI----------IIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
YN++I C + ++ A ++ +M G P + +LI
Sbjct: 572 VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 616
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 161/344 (46%), Gaps = 16/344 (4%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P + ++ +I C R +A+ ++R+M + + PD T+NALI K + A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+L D+M R + P+ TY S+I C D A +F+ M + P V T+N I Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVY 442
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
++RV++ + + ++ RGL + +YN +I FC+ L A ++ E + G+ PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
+T + L+ C L EA +LF + + Y +++ C + A+ L
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
+ G PD + T+N +I G C + +A + M + G PD +YNT++
Sbjct: 563 LPIHGVEPD--------VQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTY---ESLMEGLSDE 385
G + E+ K+ EL EM D +T E ++ +SDE
Sbjct: 615 RGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDE 658
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/464 (24%), Positives = 195/464 (42%), Gaps = 68/464 (14%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
LD A F+ M+ S + NK I ++ R + A+ ++ M R + ++ S+N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL------ 248
+I FC +L +L + + G PD VT++ L+ LCL+ + EA LF
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 249 ---------EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
+M+ ++P T+ L+ CL G A L ++M +G D
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHID------ 260
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
+VT+ +++G+C + AL +L M E + PD V Y+ ++ C+ A L
Sbjct: 261 --VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 360 KVEMDEKIIWLDEYTYESLMEGL----------------------SDEVTYSSLLNDYFA 397
EM EK I + +TY +++G D +T+++L++
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSY 457
+G + + KL EM PD+VT I G K AK + M S P
Sbjct: 379 EGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS------PDV 432
Query: 458 IIYDTLIE-NCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFD 516
+ ++T+I+ C + L+++ S RGLV + YN LI
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLV----------------ANTTTYNTLIHG 476
Query: 517 HCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSE 560
C N+N A ++++EM+ +G P + L++ + K E
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 133/296 (44%), Gaps = 44/296 (14%)
Query: 11 FRHMVRMNVMIRGFATESVMSCKEKKVGETFGL--LRMEPYLVSFKGVIKELCEKERMEE 68
F V N MI GF CK + + + L P +V+F +I C +R++E
Sbjct: 398 FPDTVTYNSMIYGF-------CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
+++RE++R+GL + TYN LI G C+V N+ A +L+
Sbjct: 451 GMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLF-------------------- 490
Query: 129 LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
EMI+ G P T N + + +E++E+AL +F + + D
Sbjct: 491 --------------QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
V+YN +I C+ ++++A ++ G+ PD TY+ +I C + ++ +A LF
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD-FVIQFSPSLV 303
+M P NSTY L+ GE + L EMR GF D F I+ + ++
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEII 652
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 149/569 (26%), Positives = 259/569 (45%), Gaps = 58/569 (10%)
Query: 19 VMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNR 78
++++G E + K + +G + P +V + +I C+ +E A V +E+
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKL 268
Query: 79 KGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKA 138
KG P ET+ +I G CK + + + L +++ RGL R + ++ +
Sbjct: 269 KGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL----RVSVWFLNNIIDAKYRHG 324
Query: 139 YKV-----FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
YKV +IA+ P VATYN I + E A+G +++GL P+ +SY
Sbjct: 325 YKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYA 384
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+I +C+ E + A ++ + E+G PD VTY LI L + G + +A ++ ++++
Sbjct: 385 PLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR 444
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
VSP + Y LM C G F A L EM R LPD + + LI G
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYV--------YATLIDGFI 496
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
DEA + E G+ D V +N ++ GFC+ L +A M+E+ + D++
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Query: 374 TYESLMEGLSDE----------------------VTYSSLLNDYFAQGNMQKVFKLEREM 411
TY ++++G + VTY+SL+N + QG+ + + +EM
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Query: 412 TRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR--MISSQCLTMPSYIIYDTLIENCSY 469
+P+ VT I L K+++T + K + M++++C+ P+ + ++ L++ +
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESST-LEKAVYYWELMMTNKCV--PNEVTFNCLLQ--GF 671
Query: 470 VEFKSAVGLVK-DFSTRGLVNEAAIAHERMHNMSVKPDG-----AVYNLLIFDHCRRGNV 523
V+ S L + D S G ++++ E H M K DG A YN + C G V
Sbjct: 672 VKKTSGKVLAEPDGSNHG---QSSLFSEFFHRM--KSDGWSDHAAAYNSALVCLCVHGMV 726
Query: 524 NKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
A +MV GF P S +++H
Sbjct: 727 KTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/466 (22%), Positives = 197/466 (42%), Gaps = 63/466 (13%)
Query: 135 LDKAYKVFNEMIA-SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
L KA ++++ ++ +P V N ++ + S R+ A ++ M +RG S D S
Sbjct: 150 LSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTC 209
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
++ C +G++E ++ KG +P+ V Y+ +I C G + A+ +F E+
Sbjct: 210 ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK 269
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG------FLPDFVI----------- 296
P+ T+ ++ +C G+F + L E++ RG FL + +
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 297 ----------QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
P + T+N LI+ LC + + A+G L + GL P+ +SY ++
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK 406
+C+ +E A +L ++M E+ D TY L+ GL G+M
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGL-------------VVSGHMDDAVN 436
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI-- 464
++ ++ G PD+ + ++GL K AK + M+ L P +Y TLI
Sbjct: 437 MKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL--PDAYVYATLIDG 494
Query: 465 ------------------ENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
E V+ ++K F G+++EA RM+ + PD
Sbjct: 495 FIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
Y+ +I + ++ ++ A ++++ M P++ + SLI+
Sbjct: 555 KFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGF 600
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 240/516 (46%), Gaps = 42/516 (8%)
Query: 37 VGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMC 96
+GE L + L ++ I C + ++ A V+ +M + G PD T ++L+ G C
Sbjct: 105 LGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC 164
Query: 97 KVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVA 155
+ + AV L DQM G P+ T+ +LI L +A + ++M+ G P +
Sbjct: 165 HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
TY + ++ AL + + M + ++V +N +I C+ +E A+++ E
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
KGI P+ VTY++LI LC G +A L ML ++P+ T+ L+ A+ G+
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
A LH+EM R PD +T+N LI+G C R+DEA + + M P
Sbjct: 345 VEAEKLHEEMIQRSIDPD--------TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
+ +YNT++ GFC+ + ++ EL EM ++ + + + VTY++++ +
Sbjct: 397 NIQTYNTLINGFCKCKRVEDGVELFREMSQRGL-------------VGNTVTYTTIIQGF 443
Query: 396 FAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP 455
F G+ + ++M N D +T + ++GL A I + S+
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE--MEL 501
Query: 456 SYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIF 515
+ IY+T+IE G+ K G V E A + ++S+KPD YN +I
Sbjct: 502 NIFIYNTMIE-----------GMCK----AGKVGE---AWDLFCSLSIKPDVVTYNTMIS 543
Query: 516 DHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
C + + +A +++++M G P+ + +LI A
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 233/515 (45%), Gaps = 43/515 (8%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L EP +V+ ++ C +R+ +A +V +M G PD T+ LI G+
Sbjct: 147 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFIT 162
AV L DQM RG P+ TY ++++ LC +D A + N+M A+ +V +N I
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIID 266
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ VE A+ +F+ M +G+ P++V+YN++I+ C G A + + +EK I P
Sbjct: 267 SLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ VT++ALI A +G L EA L EM++ + P TY L+ +C+ A +
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
M + LP+ + T+N LI+G C +RV++ + + R M + GL + V+Y T
Sbjct: 387 KFMVSKDCLPN--------IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ GF Q + A + +M + D TY L+ GL +Y L +Q
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL---CSYGKLDTALVIFKYLQ 495
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
K EM N ++ +++ I G+ K A + + P + Y+T
Sbjct: 496 K-----SEMELNIFIYNTM-----IEGMCKAGKVGEAWDLFCSLS-----IKPDVVTYNT 540
Query: 463 LIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
+I ++ L+ EA +M P+ YN LI + R +
Sbjct: 541 MISG---------------LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Query: 523 VNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
+ E+ KEM GF S +SL+ + +D +
Sbjct: 586 RAASAELIKEMRSSGFVGDA-STISLVTNMLHDGR 619
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 203/430 (47%), Gaps = 50/430 (11%)
Query: 32 CKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C K++ + L+ +P +F +I L + EA +V +M ++G PD
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNE 144
TY ++ G+CK ++ A+ L ++M + N + ++ID LC + ++ A +F E
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M G P+V TYN I + R A + S M E+ ++P++V++NA+I F ++G+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L +A ++ E +++ I PD +TY+ LI C+ L EA +F M+ D P+ TY
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI---------------------------Q 297
L+ +C L EM RG + + V +
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 298 FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
++T++ L+HGLCS ++D AL I + + + + + YNT++ G C+ ++ +A+
Sbjct: 464 VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAW 523
Query: 358 ELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
+L + K D VTY+++++ ++ +Q+ L R+M +G L
Sbjct: 524 DLFCSLSIK----------------PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 418 PDSVTLGVFI 427
P+S T I
Sbjct: 568 PNSGTYNTLI 577
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 204/439 (46%), Gaps = 52/439 (11%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+D A +F +M+ S PS+ +NK ++A + E + + M G+S DL +Y+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
I+ FC+ +L AL + A+ ++ G PD VT S+L+ C + +A L +M+
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P T+T L++ L + S A L D+M RG PD LVT+ +++GLC
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD--------LVTYGTVVNGLCK 235
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+D AL +L M + + V +NT++ C+ R ++ A +L EM+ K I + T
Sbjct: 236 RGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVT 295
Query: 375 YESLMEGL------SDE----------------VTYSSLLNDYFAQGNMQKVFKLEREMT 412
Y SL+ L SD VT+++L++ +F +G + + KL EM
Sbjct: 296 YNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMI 355
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVE 471
+ PD++T + ING AK + M+S CL P+ Y+TLI C
Sbjct: 356 QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL--PNIQTYNTLINGFCKCKR 413
Query: 472 FKSAVGLVKDFSTRGLV-------------------NEAAIAHERMHNMSVKPDGAVYNL 512
+ V L ++ S RGLV + A + ++M + V D Y++
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473
Query: 513 LIFDHCRRGNVNKAYEMYK 531
L+ C G ++ A ++K
Sbjct: 474 LLHGLCSYGKLDTALVIFK 492
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 117/300 (39%), Gaps = 70/300 (23%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEV 72
++V N +I F E + + +K+ E ++P +++ +I C R++EAK++
Sbjct: 327 NVVTFNALIDAFFKEGKL-VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNE------------ 120
+ M K P+ +TYN LI G CK + + VEL+ +M RGL N
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQ 445
Query: 121 -----------------------RTYMSLIDLLCTWW-LDKAYKVF-------------- 142
TY L+ LC++ LD A +F
Sbjct: 446 AGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFI 505
Query: 143 -NEMIAS-----------------GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
N MI P V TYN I+ S +++A +F M E G
Sbjct: 506 YNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
P+ +YN +I +D + + E+ E G + D T S L+ + G L ++F
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKSF 624
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 225/493 (45%), Gaps = 40/493 (8%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N++I F S +S +G+ L EP +V+ ++ C +R+ +A +V +M
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LD 136
G PD T+ LI G+ AV L D+M RG PN TY +++ LC +D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A+ + N+M A+ +V Y+ I + + AL +F+ M +G+ P++++Y+++I
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
S C A + ++ +E+ I P+ VT++ALI A +G L EA L+ EM++ +
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P TY+ L+ +C+ A H+ + M + P+ +VT+N LI+G C +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN--------VVTYNTLINGFCKAK 414
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
R+DE + + R M + GL + V+Y T++ GF Q R+ A + +M + + TY
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 377 SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATT 436
+L++GL G ++K + + R+ P T + I G+ K
Sbjct: 475 TLLDGLC-------------KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG-- 519
Query: 437 SIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHE 496
+ G L S P IIY+T+I F +GL EA
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISG---------------FCRKGLKEEADALFR 564
Query: 497 RMHNMSVKPDGAV 509
+M PD
Sbjct: 565 KMREDGPLPDSGT 577
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 233/509 (45%), Gaps = 47/509 (9%)
Query: 37 VGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMC 96
+GE L + L ++ +I C + ++ A ++ +M + G P T ++L+ G C
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 97 KVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVA 155
+ + AV L DQM G P+ T+ +LI L +A + + M+ G P++
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 226
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
TY + ++ A + + M + ++V Y+ VI C+ + AL + E
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
KG+ P+ +TYS+LI LC +A L +M+ ++P+ T+ L+ A+ G+
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
A L+DEM R PD + T+++LI+G C +R+DEA + M P
Sbjct: 347 VEAEKLYDEMIKRSIDPD--------IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
+ V+YNT++ GFC+ + + + EL EM ++ + + + VTY++L++ +
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGL-------------VGNTVTYTTLIHGF 445
Query: 396 FAQ---GNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
F N Q VFK +M +G P+ +T ++GL K A + + S+
Sbjct: 446 FQARDCDNAQMVFK---QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK-- 500
Query: 453 TMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
P+ Y+ +IE C + + L S +G VKPD +YN
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG----------------VKPDVIIYN 544
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
+I CR+G +A ++++M G P
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 207/471 (43%), Gaps = 53/471 (11%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
LD A +F M+ S LPS+ +NK ++A ++ + + + M G+S +L +YN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+I+ FC+ ++ AL + + ++ G P VT S+L+ C + +A L +M+
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P T+T L++ L + S A L D M RG P+LVT+ +++GLC
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG--------CQPNLVTYGVVVNGLCK 237
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+D A +L M + + V Y+TV+ C+ R A L EM+ K + + T
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 375 YESLM------EGLSDE----------------VTYSSLLNDYFAQGNMQKVFKLEREMT 412
Y SL+ E SD VT+++L++ + +G + + KL EM
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVE 471
+ PD T ING AK + MIS C P+ + Y+TLI C
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYNTLINGFCKAKR 415
Query: 472 FKSAVGLVKDFSTRGLV-------------------NEAAIAHERMHNMSVKPDGAVYNL 512
V L ++ S RGLV + A + ++M + V P+ YN
Sbjct: 416 IDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNT 475
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGW 563
L+ C+ G + KA +++ + P +++ +I + K E GW
Sbjct: 476 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK-VEDGW 525
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 229/499 (45%), Gaps = 43/499 (8%)
Query: 31 SCKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPD 84
SC+ E+ LL P ++ +IK + +A V+ + + G PD
Sbjct: 99 SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPD 157
Query: 85 CETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFN 143
YNALI G CK+ + A + D+MR + SP+ TY +I LC+ LD A KV N
Sbjct: 158 VFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 144 EMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
++++ P+V TY I A + V++AL + M RGL PD+ +YN +I C++G
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 204 ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYT 263
+++A E+ KG PD ++Y+ L++AL QG E L +M P+ TY+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 264 RLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALG 323
L+ C G+ A +L M+ +G PD +++ LI C R+D A+
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPD--------AYSYDPLIAAFCREGRLDVAIE 389
Query: 324 ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL- 382
L M G PD V+YNTVL C+ + +A E+ ++ E + +Y ++ L
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 383 ---------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
DE+TY+S+++ +G + + F+L +M + P V
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVV 509
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKS-AVGLVK 480
T + + G K A +L M+ + C P+ Y LIE + +++ A+ L
Sbjct: 510 TYNIVLLGFCKAHRIEDAINVLESMVGNGC--RPNETTYTVLIEGIGFAGYRAEAMELAN 567
Query: 481 DFSTRGLVNEAAIAHERMH 499
D ++E + +R+H
Sbjct: 568 DLVRIDAISEYSF--KRLH 584
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 220/496 (44%), Gaps = 42/496 (8%)
Query: 61 CEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNE 120
C E+ ++ M RKG PD LI G +RN+ AV + + + G P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 121 RTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSA 179
Y +LI+ C +D A +V + M + F P TYN I + S +++ AL + +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS 239
+ P +++Y +I +G +++AL++ E + +G+ PD TY+ +I+ +C +G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
+ AF++ + P +Y L+ A G++ L +M F +
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM--------FSEKCD 330
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
P++VT++ LI LC +++EA+ +L+ M E GL+PDA SY+ ++ FC+ L A E
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 360 KVEMDEKIIWLDEYTYESLMEG-LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLP 418
M + +G L D V Y+++L G + ++ ++ G P
Sbjct: 391 LETM--------------ISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Query: 419 DSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGL 478
+S + + L A ++L M+S+ P I Y+++I +C
Sbjct: 437 NSSSYNTMFSALWSSGDKIRALHMILEMMSNG--IDPDEITYNSMI-SC----------- 482
Query: 479 VKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
G+V+EA M + P YN+++ C+ + A + + MV G
Sbjct: 483 ---LCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 539 FPHMFSVLSLIHALYY 554
P+ + LI + +
Sbjct: 540 RPNETTYTVLIEGIGF 555
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 151/306 (49%), Gaps = 22/306 (7%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERME 67
M N +IRG CKE V F ++R EP ++S+ +++ L + + E
Sbjct: 263 MFTYNTIIRGM-------CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
E ++++ +M + P+ TY+ LI +C+ + A+ L M+ +GL+P+ +Y LI
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 128 DLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
C LD A + MI+ G LP + YN + + + +QAL IF + E G S
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
P+ SYN + S G+ +AL + E + GI PD++TY+++I LC +G + EAF+L
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
++M + PS TY ++ +C A ++ + M G P+ T+
Sbjct: 496 LVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG--------CRPNETTYT 547
Query: 307 ALIHGL 312
LI G+
Sbjct: 548 VLIEGI 553
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
+ H C E+L +L M G +PD + ++ GF +R + KA + +E+ EK
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV-MEILEKF 153
Query: 368 IWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFI 427
G D Y++L+N + + ++ M + PD+VT + I
Sbjct: 154 -------------GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 200
Query: 428 NGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGL 487
L + +A +L +++S C P+ I Y LIE + +E G
Sbjct: 201 GSLCSRGKLDLALKVLNQLLSDNC--QPTVITYTILIE-ATMLE--------------GG 243
Query: 488 VNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLS 547
V+EA + M + +KPD YN +I C+ G V++A+EM + + G P + S
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 548 LIHAL 552
L+ AL
Sbjct: 304 LLRAL 308
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 215/449 (47%), Gaps = 25/449 (5%)
Query: 17 MNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREM 76
+N+MI F +C V L EP +F +IK L + ++ EA +V M
Sbjct: 126 LNIMINCFC-RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184
Query: 77 NRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWL 135
G PD TYN+++ G+C+ + A++L +M R + + TY ++ID LC +
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
D A +F EM G SV TYN + + + + M R + P+++++N +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
+ F ++G+L++A E+ E + +GI P+ +TY+ L+ C+Q L EA ++ M+R
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
SP T+T L+ YC+V + + RG + + VT++ L+ G C
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVAN--------AVTYSILVQGFCQS 416
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
++ A + + M G+ PD ++Y +L G C +L+KA E+ ++ + + L Y
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMY 476
Query: 376 ESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT 435
+++EG+ G ++ + L + G P+ +T V I+GL KK +
Sbjct: 477 TTIIEGMC-------------KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 523
Query: 436 TSIAKGILLRMISSQCLTMPSYIIYDTLI 464
S A ILLR + P+ Y+TLI
Sbjct: 524 LSEA-NILLRKMEEDG-NAPNDCTYNTLI 550
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 137/565 (24%), Positives = 244/565 (43%), Gaps = 61/565 (10%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
+ ++A + +EM R P ++ + + + ++ Q+ + G++ N T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 125 SLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
+I+ C AY V +++ G+ P T+N I +V +A+ + M E
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
G PD+V+YN++++ C+ G+ AL++ + E+ + D TYS +I +LC G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
LF EM + S TY L+ C G+++ L +M R + P+++
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR--------EIVPNVI 299
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
TFN L+ ++ EA + + M G+SP+ ++YNT++ G+C L +A + M
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 364 DEKIIWLDEYTYESLMEG----------------------LSDEVTYSSLLNDYFAQGNM 401
D T+ SL++G +++ VTYS L+ + G +
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
+ +L +EM +G LPD +T G+ ++GL A I + S+ ++Y
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSK--MDLGIVMYT 477
Query: 462 TLIEN-CSYVEFKSAVGL-------------------VKDFSTRGLVNEAAIAHERMHNM 501
T+IE C + + A L + +G ++EA I +M
Sbjct: 478 TIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEM 561
P+ YN LI H R G++ + ++ +EM GF S+ +I L K
Sbjct: 538 GNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK---- 593
Query: 562 GWVIRNTLRSCNLNDSELHQVLNEI 586
R TLR C S+ Q L E+
Sbjct: 594 ----RLTLRYCLSKGSKSRQDLLEL 614
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 25/277 (9%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLL------RMEPYLVSFKGVIKELCEKERM 66
+++ N ++ G+ C + ++ E +L + P +V+F +IK C +R+
Sbjct: 332 NIITYNTLMDGY-------CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
++ +V R ++++GL + TY+ L+ G C+ + A EL+ +M G+ P+ TY L
Sbjct: 385 DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGIL 444
Query: 127 IDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
+D LC L+KA ++F ++ S + Y I +VE A +F ++ +G+
Sbjct: 445 LDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGV 504
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
P++++Y +IS C+ G L +A + + E G P+D TY+ LI+A G L +
Sbjct: 505 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAK 564
Query: 246 LFLEM----LRGDVSPSN-------STYTRLMYAYCL 271
L EM D S S RL YCL
Sbjct: 565 LIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCL 601
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 151/366 (41%), Gaps = 38/366 (10%)
Query: 202 DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
D + + A+ + E + LP V +S A+ D ++ ++ + T
Sbjct: 66 DIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYT 125
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA 321
++ +C + A+ + ++ G+ PD TFN LI GL +V EA
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPD--------TTTFNTLIKGLFLEGKVSEA 177
Query: 322 LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG 381
+ ++ M E G PD V+YN+++ G C+ + A +L +M+E+ + D +TY ++++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 382 LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG 441
L + G + L +EM G VT + GL K +
Sbjct: 238 LCRD-------------GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGAL 284
Query: 442 ILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM 501
+L M+S + +P+ I ++ L++ F G + EA ++ M
Sbjct: 285 LLKDMVSRE--IVPNVITFNVLLDV---------------FVKEGKLQEANELYKEMITR 327
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEM 561
+ P+ YN L+ +C + +++A M MV P + + SLI ++ +
Sbjct: 328 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 387
Query: 562 GWVIRN 567
V RN
Sbjct: 388 MKVFRN 393
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/510 (25%), Positives = 233/510 (45%), Gaps = 45/510 (8%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP V F ++ LC + R+ EA E+V M G P T N L+ G+C + AV
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
L D+M G PNE TY +++++C + A ++ +M Y+ I
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
++ A +F+ M +G D+++YN +I FC G + ++ + +++ I P+ V
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
T+S LI + +G L EA L EM++ ++P+ TY L+ +C A + D M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
+G PD ++TFN LI+G C R+D+ L + R M G+ + V+YNT++
Sbjct: 395 ISKGCDPD--------IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVF 405
GFCQ +L+ A +L EM + + D +Y+ L++GL D G ++K
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD-------------NGELEKAL 493
Query: 406 KLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP---SYIIYDT 462
+ I G +K+ + GI + +I C ++ ++ +
Sbjct: 494 E--------------------IFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 463 LIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
L ++ ++ ++ + + +++A I +M PD YN+LI H +
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 523 VNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
A E+ +EM GF + +V +I+ L
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/425 (26%), Positives = 201/425 (47%), Gaps = 37/425 (8%)
Query: 32 CKEKKVGETFGLL-RM-----EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C E +V E L+ RM +P L++ ++ LC ++ +A ++ M G P+
Sbjct: 169 CLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNE 228
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNE 144
TY ++ MCK A+EL +M R + + Y +ID LC LD A+ +FNE
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 288
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M GF + TYN I + ++ R + + M +R +SP++V+++ +I F ++G+
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGK 348
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L +A ++ E +++GI P+ +TY++LI C + L EA + M+ P T+
Sbjct: 349 LREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNI 408
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ YC L EM RG + + VT+N L+ G C +++ A +
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIAN--------TVTYNTLVQGFCQSGKLEVAKKL 460
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS- 383
+ M + PD VSY +L G C EL+KA E+ ++++ + LD Y ++ G+
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 384 ---------------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
D Y+ ++++ + ++ K L R+MT G+ PD +T
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 423 LGVFI 427
+ I
Sbjct: 581 YNILI 585
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/525 (24%), Positives = 234/525 (44%), Gaps = 44/525 (8%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++ F + + + ++ E + ++M KG+A T + +I C+ R + A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
++ G P+ + +L++ LC + +A ++ + M+ G P++ T N +
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+ +V A+ + M E G P+ V+Y V++ C+ G+ A+E+ + E+ I D V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
YS +I LC GSL AF+LF EM TY L+ +C G + L +M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
R + SP++VTF+ LI ++ EA +L+ M + G++P+ ++YN+++ G
Sbjct: 326 KR--------KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDG 377
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK 406
FC+ L++A ++ M K D T+ L+ G Y + +
Sbjct: 378 FCKENRLEEAIQMVDLMISKGCDPDIMTFNILING-------------YCKANRIDDGLE 424
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
L REM+ G + ++VT + G + +AK + M+S + P + Y L++
Sbjct: 425 LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR--VRPDIVSYKILLDG 482
Query: 467 -CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM-------------------SVKPD 506
C E + A+ + + + I +H M VK D
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
YN++I + CR+ +++KA ++++M G P + LI A
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 217/455 (47%), Gaps = 60/455 (13%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLL-RM-----EPYLVSFKGVIKELCEKERME 67
++ +N ++ G C KV + L+ RM +P V++ V+ +C+ +
Sbjct: 193 LITLNTLVNGL-------CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
A E++R+M + + D Y+ +I G+CK ++ A L+++M ++G + TY +LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 128 DLLCTW--WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
C W D A K+ +MI P+V T++ I +++ ++ +A + M +RG+
Sbjct: 306 GGFCNAGRWDDGA-KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI 364
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
+P+ ++YN++I FC++ LE+A+++ + KG PD +T++ LI C + + +
Sbjct: 365 APNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLE 424
Query: 246 LFLEM-LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI-------- 296
LF EM LRG V + TY L+ +C G+ +A L EM R PD V
Sbjct: 425 LFREMSLRG-VIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Query: 297 ----QFSPSLVTFNAL---------------IHGLCSLERVDEALGILRGMPEMGLSPDA 337
+ +L F + IHG+C+ +VD+A + +P G+ DA
Sbjct: 484 CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYF 396
+YN ++ C+ L KA L +M E EG + DE+TY+ L+ +
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTE--------------EGHAPDELTYNILIRAHL 589
Query: 397 AQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
+ +L EM +G+ D T+ + IN L+
Sbjct: 590 GDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 177/419 (42%), Gaps = 49/419 (11%)
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
+Y +++ L + + A+ +F M + P ++ +N + S + + E L + +
Sbjct: 55 SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
KGI T S +I C L AF ++++ P + L+ CL
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRV 174
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
S A L D M G P+L+T N L++GLC +V +A+ ++ M E G P
Sbjct: 175 SEALELVDRMVEMG--------HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL------------- 382
+ V+Y VL C+ + A EL +M+E+ I LD Y +++GL
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLF 286
Query: 383 ---------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
+D +TY++L+ + G KL R+M + P+ VT V I+ K+
Sbjct: 287 NEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
Query: 434 ATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAA 492
A +L M+ Q P+ I Y++LI+ C + A+ +V ++G
Sbjct: 347 GKLREADQLLKEMM--QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG------ 398
Query: 493 IAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
PD +N+LI +C+ ++ E+++EM G + + +L+
Sbjct: 399 ----------CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 16/301 (5%)
Query: 2 KLLRATLKS--FRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSF 53
KLLR +K ++V +V+I F KE K+ E LL+ + P +++
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFV-------KEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 54 KGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRV 113
+I C++ R+EEA ++V M KG PD T+N LI G CK + +EL+ +M +
Sbjct: 372 NSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSL 431
Query: 114 RGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQ 172
RG+ N TY +L+ C + L+ A K+F EM++ P + +Y + + +E+
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
AL IF + + + D+ Y +I C +++ A ++ KG+ D Y+ +I
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
LC + SL +A LF +M +P TY L+ A+ + + A L +EM+ GF
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611
Query: 293 D 293
D
Sbjct: 612 D 612
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 123/281 (43%), Gaps = 53/281 (18%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERM 66
+ + N +I GF CKE ++ E ++ + +P +++F +I C+ R+
Sbjct: 367 NTITYNSLIDGF-------CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
++ E+ REM+ +G+ + TYN L+ G C+ + A +L+ +M R + P+ +Y L
Sbjct: 420 DDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 127 IDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSA------ 179
+D LC L+KA ++F ++ S + Y I ++ +V+ A +F +
Sbjct: 480 LDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Query: 180 -----------------------------MAERGLSPDLVSYNAVISKFCQDGELEKALE 210
M E G +PD ++YN +I D + A E
Sbjct: 540 KLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAE 599
Query: 211 IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
+ E G P DV+ ++ + G L ++ FL+ML
Sbjct: 600 LIEEMKSSG-FPADVSTVKMVINMLSSGELDKS---FLDML 636
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 257/589 (43%), Gaps = 77/589 (13%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV-ELYDQ 110
S+ +I R EA V ++M G P TYN ++ K+ + L ++
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 111 MRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
M+ G++P+ TY +LI L + A +VF EM A+GF TYN + Y S R
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
++A+ + + M G SP +V+YN++IS + +DG L++A+E+K + EKG PD TY+
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
L+ G + A +F EM P+ T+ + Y G+F+ + DE+ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 290 FLPDFVI---------------------------QFSPSLVTFNALIHGLCSLERVDEAL 322
PD V F P TFN LI ++A+
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 323 GILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL---- 378
+ R M + G++PD +YNTVL + +++ ++ EM++ +E TY SL
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 379 --------MEGLSDEVTYSSLLNDYFAQGNMQKVFKL-----------ER---EMTRNGY 416
M L++EV YS ++ + + K L ER E+ G+
Sbjct: 570 ANGKEIGLMHSLAEEV-YSGVIE---PRAVLLKTLVLVCSKCDLLPEAERAFSELKERGF 625
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAV 476
PD TL ++ ++ + A G+L M + T PS Y++L+ Y+ +SA
Sbjct: 626 SPDITTLNSMVSIYGRRQMVAKANGVLDYM-KERGFT-PSMATYNSLM----YMHSRSA- 678
Query: 477 GLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHY 536
DF + +A +KPD YN +I+ +CR + A ++ EM +
Sbjct: 679 ----DFGKSEEILREILAK------GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 537 GFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLR-SCNLNDSELHQVLN 584
G P + + + I + D E V+R ++ C N + + +++
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVD 777
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 198/447 (44%), Gaps = 45/447 (10%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V++ +I ++EA E+ +M KG PD TY L+ G + + A+ +
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSI 406
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+++MR G PN T+ + I + + K+F+E+ G P + T+N + +
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+ + G+F M G P+ ++N +IS + + G E+A+ + ++ G+ PD T
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y+ ++ AL G ++ + EM G P+ TY L++AY E + L +E+
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 287 HRGFLPDFVI---------------------------QFSPSLVTFNALIHGLCSLERVD 319
P V+ FSP + T N+++ + V
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 320 EALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
+A G+L M E G +P +YN++++ + + K+ E+ E+ L
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI--------------LA 692
Query: 380 EGL-SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
+G+ D ++Y++++ Y M+ ++ EM +G +PD +T FI +
Sbjct: 693 KGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEE 752
Query: 439 AKGILLRMISSQCLTMPSYIIYDTLIE 465
A G++ MI C P+ Y+++++
Sbjct: 753 AIGVVRYMIKHGC--RPNQNTYNSIVD 777
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 179/420 (42%), Gaps = 43/420 (10%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+ A +FN + GF V +Y I+A+ +S R +A+ +F M E G P L++YN
Sbjct: 189 VSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNV 248
Query: 195 VISKFCQDG-ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL-PEAFDLFLEMLR 252
+++ F + G K + + GI PD TY+ LI C +GSL EA +F EM
Sbjct: 249 ILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKA 307
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
S TY L+ Y A + +EM G FSPS+VT+N+LI
Sbjct: 308 AGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG--------FSPSIVTYNSLISAY 359
Query: 313 CSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDE 372
+DEA+ + M E G PD +Y T+L GF + +++ A + EM
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA------ 413
Query: 373 YTYESLMEGLSDEV-TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
G + T+++ + Y +G ++ K+ E+ G PD VT +
Sbjct: 414 --------GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEA 491
+ S G+ M + +P ++TLI +S G +A
Sbjct: 466 QNGMDSEVSGVFKEM--KRAGFVPERETFNTLISA---------------YSRCGSFEQA 508
Query: 492 AIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
+ RM + V PD + YN ++ R G ++ ++ EM P+ + SL+HA
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 173/393 (44%), Gaps = 29/393 (7%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALIC--GMCKVRNMLCA 104
+P + +F IK + + E ++ E+N GL+PD T+N L+ G + + +
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
V + +M+ G P T+ +LI ++A V+ M+ +G P ++TYN + A
Sbjct: 476 V--FKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAA 533
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
EQ+ + + M + P+ ++Y +++ + E+ + E I P
Sbjct: 534 LARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPR 593
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
V L+ LPEA F E+ SP +T ++ Y + A + D
Sbjct: 594 AVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLD 653
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
M+ RG F+PS+ T+N+L++ ++ ILR + G+ PD +SYNTV
Sbjct: 654 YMKERG--------FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTV 705
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQK 403
++ +C+ ++ A + EM I + D +TY++ + Y A ++
Sbjct: 706 IYAYCRNTRMRDASRIFSEMRNSGI-------------VPDVITYNTFIGSYAADSMFEE 752
Query: 404 VFKLEREMTRNGYLPDSVTLGVFING---LNKK 433
+ R M ++G P+ T ++G LN+K
Sbjct: 753 AIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRK 785
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 159/357 (44%), Gaps = 44/357 (12%)
Query: 36 KVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGM 95
K+ + + + P +V++ ++ + E V +EM R G P+ ET+N LI
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 96 CKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSV 154
+ + A+ +Y +M G++P+ TY +++ L + +++ KV EM P+
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 155 ATYNKFITAYLSSERV-----------------------------------EQALGIFSA 179
TY + AY + + + +A FS
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS 239
+ ERG SPD+ + N+++S + + + KA + E+G P TY++L+
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
++ ++ E+L + P +Y ++YAYC A + EMR+ G +PD
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD------ 733
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
++T+N I + +EA+G++R M + G P+ +YN+++ G+C++ +A
Sbjct: 734 --VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 191/456 (41%), Gaps = 60/456 (13%)
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
RV A +F+ + E G S D+ SY ++IS F G +A+ + + E G P +TY+
Sbjct: 188 RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYN 247
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGD-VSPSNSTYTRLMYAYCLVGEFSM-AFHLHDEMR 286
++ G+ +E ++ D ++P TY L+ C G A + +EM+
Sbjct: 248 VILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQEAAQVFEEMK 306
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
GF D VT+NAL+ R EA+ +L M G SP V+YN+++
Sbjct: 307 AAGFSYD--------KVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK 406
+ + L +A ELK +M EK D +TY +L+ G G ++
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE-------------RAGKVESAMS 405
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
+ EM G P+ T FI + + I + + C P + ++TL+
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI--NVCGLSPDIVTWNTLL-- 461
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
AV F G+ +E + + M P+ +N LI + R G+ +A
Sbjct: 462 --------AV-----FGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 527 YEMYKEMVHYGFFPHMFSVLSLIHAL-------YYDRKNSEM--GWVIRNTLRSCNLNDS 577
+Y+ M+ G P + + +++ AL ++ +EM G N L C+L
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL--- 565
Query: 578 ELHQVLNEIEVKKCKIDALLNALAKIAVDGMLLDRG 613
LH N E+ L+++LA+ G++ R
Sbjct: 566 -LHAYANGKEI------GLMHSLAEEVYSGVIEPRA 594
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 224/510 (43%), Gaps = 76/510 (14%)
Query: 79 KGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL--CTWWLD 136
KG++PD + I CK + AV+L+ +M G++PN T+ ++ID L C + D
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY-D 312
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A+ +M+ G P++ TY+ + ++R+ A + M ++G P+++ YN +I
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA------------- 243
F + G L KA+EIK V KG+ TY+ LI+ C G A
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 244 ------------------FDLFL----EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
FD L EML ++SP T L+ C G+ S A L
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+ ++GF+ D T NAL+HGLC ++DEA I + + G D VSYN
Sbjct: 493 WFQFLNKGFVVD--------TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM 401
T++ G C ++L +A+ EM ++ + D YTY L+ GL F +
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL-------------FNMNKV 591
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
++ + + RNG LPD T V I+G K T + M+S P+ ++Y+
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN--VQPNTVVYN 649
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
LI + + G ++ A E M + + P+ A Y LI
Sbjct: 650 HLI---------------RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 522 NVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
V +A +++EM G P++F +LI
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 218/508 (42%), Gaps = 74/508 (14%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P + F I C+ ++EEA ++ +M G+AP+ T+N +I G+ A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
++M RG+ P TY L+ L + AY V EM GF P+V YN I ++
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ + + +A+ I M +GLS +YN +I +C++G+ + A + E + G +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
+++++I LC A EML ++SP T L+ C G+ S A L +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
++GF+ D T NAL+HGLC ++DEA I + + G D VSYNT++
Sbjct: 496 FLNKGFVVD--------TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
G C K ++DE ++LDE L D TYS L+ F +++
Sbjct: 548 SGCCG----------KKKLDEAFMFLDEMVKRGLK---PDNYTYSILICGLFNMNKVEEA 594
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
+ + RNG LPD T Y +I
Sbjct: 595 IQFWDDCKRNGMLPDVYT-------------------------------------YSVMI 617
Query: 465 ENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVN 524
+ C E E + M + +V+P+ VYN LI +CR G ++
Sbjct: 618 DGCCKAE---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 525 KAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
A E+ ++M H G P+ + SLI +
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGM 690
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 196/418 (46%), Gaps = 23/418 (5%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N +I+G+ E+ + E + SF VI LC + A V EM
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSI-GFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLD 136
+ ++P LI G+CK A+EL+ Q +G + RT +L+ LC LD
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A+++ E++ G + +YN I+ +++++A M +RGL PD +Y+ +I
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
++E+A++ + G+LPD TYS +I C E + F EM+ +V
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P+ Y L+ AYC G SMA L ++M+H+G SP+ T+ +LI G+ +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKG--------ISPNSATYTSLIKGMSIIS 694
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
RV+EA + M GL P+ Y ++ G+ ++ ++ K L EM K +
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH------- 747
Query: 377 SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
+++TY+ ++ Y GN+ + +L EM G +PDS+T FI G K+
Sbjct: 748 ------PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 213/498 (42%), Gaps = 57/498 (11%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
MEP L+++ ++K L +R+ +A V++EM +KG P+ YN LI + ++ A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E+ D M +GLS TY +LI C D A ++ EM++ GF + ++ I
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S + AL M R +SP +IS C+ G+ KALE+ + + KG + D
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
T +AL+ LC G L EAF + E+L +Y L+ C + AF DE
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 285 MRHRGFLPDF------------------VIQFS---------PSLVTFNALIHGLCSLER 317
M RG PD IQF P + T++ +I G C ER
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
+E M + P+ V YN ++ +C+ L A EL+ +M K I + TY S
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 378 LMEGLS----------------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
L++G+S + Y++L++ Y G M KV L REM
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSA 475
P+ +T V I G + + A +L M +P I Y I Y K
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG--IVPDSITYKEFI----YGYLKQG 799
Query: 476 VGLVKDFSTRGLVNEAAI 493
G+++ F N AAI
Sbjct: 800 -GVLEAFKGSDEENYAAI 816
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 19/323 (5%)
Query: 60 LCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPN 119
LCE +++EA + +E+ +G D +YN LI G C + + A D+M RGL P+
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 120 ERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
TY LI L +++A + +++ +G LP V TY+ I +ER E+ F
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
M + + P+ V YN +I +C+ G L ALE++ + KGI P+ TY++LI+ + +
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
+ EA LF EM + P+ YT L+ Y +G+ L EM +
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK--------NV 746
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
P+ +T+ +I G V EA +L M E G+ PD+++Y ++G+ LK+
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY-----LKQGGV 801
Query: 359 LKVEMDEKIIWLDEYTYESLMEG 381
L E DE Y +++EG
Sbjct: 802 L-----EAFKGSDEENYAAIIEG 819
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 175/408 (42%), Gaps = 58/408 (14%)
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
AL +F +A +G+ P + N +++ + E +K E + V KG+ PD ++ I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAIN 268
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
A C G + EA LF +M V+P+ T+ ++ + G + AF ++M RG
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM-- 326
Query: 293 DFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
P+L+T++ L+ GL +R+ +A +L+ M + G P+ + YN ++ F +
Sbjct: 327 ------EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 353 LKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
L KA E+K M K + L TY +L++G Y G +L +EM
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKG-------------YCKNGQADNAERLLKEML 427
Query: 413 RNGYLPDSVTLGVFIN-------GLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
G+ +V G F + L + +LLR +S P + TLI
Sbjct: 428 SIGF---NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS------PGGGLLTTLIS 478
Query: 466 N-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM--SVKPDGAV------------- 509
C + + A+ L F +G V + ++ +H + + K D A
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 510 ----YNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALY 553
YN LI C + +++A+ EMV G P ++ LI L+
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 14/277 (5%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEE 68
V N +I G C +KK+ E F L ++P ++ +I L ++EE
Sbjct: 541 VSYNTLISG-------CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A + + R G+ PD TY+ +I G CK E +D+M + + PN Y LI
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 129 LLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
C + L A ++ +M G P+ ATY I RVE+A +F M GL P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
++ Y A+I + + G++ K + E K + P+ +TY+ +I G++ EA L
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
EM + P + TY +Y Y G AF DE
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 139/510 (27%), Positives = 224/510 (43%), Gaps = 76/510 (14%)
Query: 79 KGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL--CTWWLD 136
KG++PD + I CK + AV+L+ +M G++PN T+ ++ID L C + D
Sbjct: 254 KGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRY-D 312
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A+ +M+ G P++ TY+ + ++R+ A + M ++G P+++ YN +I
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA------------- 243
F + G L KA+EIK V KG+ TY+ LI+ C G A
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 244 ------------------FDLFL----EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
FD L EML ++SP T L+ C G+ S A L
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+ ++GF+ D T NAL+HGLC ++DEA I + + G D VSYN
Sbjct: 493 WFQFLNKGFVVD--------TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM 401
T++ G C ++L +A+ EM ++ + D YTY L+ GL F +
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL-------------FNMNKV 591
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
++ + + RNG LPD T V I+G K T + M+S P+ ++Y+
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN--VQPNTVVYN 649
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
LI + + G ++ A E M + + P+ A Y LI
Sbjct: 650 HLI---------------RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 522 NVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
V +A +++EM G P++F +LI
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 218/508 (42%), Gaps = 74/508 (14%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P + F I C+ ++EEA ++ +M G+AP+ T+N +I G+ A
Sbjct: 256 VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAF 315
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
++M RG+ P TY L+ L + AY V EM GF P+V YN I ++
Sbjct: 316 MFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSF 375
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ + + +A+ I M +GLS +YN +I +C++G+ + A + E + G +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
+++++I LC A EML ++SP T L+ C G+ S A L +
Sbjct: 436 GSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ 495
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
++GF+ D T NAL+HGLC ++DEA I + + G D VSYNT++
Sbjct: 496 FLNKGFVVD--------TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLI 547
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
G C K ++DE ++LDE L D TYS L+ F +++
Sbjct: 548 SGCCG----------KKKLDEAFMFLDEMVKRGLK---PDNYTYSILICGLFNMNKVEEA 594
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
+ + RNG LPD T Y +I
Sbjct: 595 IQFWDDCKRNGMLPDVYT-------------------------------------YSVMI 617
Query: 465 ENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVN 524
+ C E E + M + +V+P+ VYN LI +CR G ++
Sbjct: 618 DGCCKAE---------------RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS 662
Query: 525 KAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
A E+ ++M H G P+ + SLI +
Sbjct: 663 MALELREDMKHKGISPNSATYTSLIKGM 690
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 196/418 (46%), Gaps = 23/418 (5%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N +I+G+ E+ + E + SF VI LC + A V EM
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSI-GFNVNQGSFTSVICLLCSHLMFDSALRFVGEML 462
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLD 136
+ ++P LI G+CK A+EL+ Q +G + RT +L+ LC LD
Sbjct: 463 LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLD 522
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A+++ E++ G + +YN I+ +++++A M +RGL PD +Y+ +I
Sbjct: 523 EAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
++E+A++ + G+LPD TYS +I C E + F EM+ +V
Sbjct: 583 CGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQ 642
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P+ Y L+ AYC G SMA L ++M+H+G SP+ T+ +LI G+ +
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKG--------ISPNSATYTSLIKGMSIIS 694
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
RV+EA + M GL P+ Y ++ G+ ++ ++ K L EM K +
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH------- 747
Query: 377 SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
+++TY+ ++ Y GN+ + +L EM G +PDS+T FI G K+
Sbjct: 748 ------PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 213/498 (42%), Gaps = 57/498 (11%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
MEP L+++ ++K L +R+ +A V++EM +KG P+ YN LI + ++ A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E+ D M +GLS TY +LI C D A ++ EM++ GF + ++ I
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLL 445
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S + AL M R +SP +IS C+ G+ KALE+ + + KG + D
Sbjct: 446 CSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDT 505
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
T +AL+ LC G L EAF + E+L +Y L+ C + AF DE
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 285 MRHRGFLPDF------------------VIQFS---------PSLVTFNALIHGLCSLER 317
M RG PD IQF P + T++ +I G C ER
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
+E M + P+ V YN ++ +C+ L A EL+ +M K I + TY S
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTS 685
Query: 378 LMEGLS----------------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
L++G+S + Y++L++ Y G M KV L REM
Sbjct: 686 LIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKN 745
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSA 475
P+ +T V I G + + A +L M +P I Y I Y K
Sbjct: 746 VHPNKITYTVMIGGYARDGNVTEASRLLNEMREKG--IVPDSITYKEFI----YGYLKQG 799
Query: 476 VGLVKDFSTRGLVNEAAI 493
G+++ F N AAI
Sbjct: 800 -GVLEAFKGSDEENYAAI 816
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 19/323 (5%)
Query: 60 LCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPN 119
LCE +++EA + +E+ +G D +YN LI G C + + A D+M RGL P+
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 120 ERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
TY LI L +++A + +++ +G LP V TY+ I +ER E+ F
Sbjct: 575 NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFD 634
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
M + + P+ V YN +I +C+ G L ALE++ + KGI P+ TY++LI+ + +
Sbjct: 635 EMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIIS 694
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
+ EA LF EM + P+ YT L+ Y +G+ L EM +
Sbjct: 695 RVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK--------NV 746
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
P+ +T+ +I G V EA +L M E G+ PD+++Y ++G+ LK+
Sbjct: 747 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY-----LKQGGV 801
Query: 359 LKVEMDEKIIWLDEYTYESLMEG 381
L E DE Y +++EG
Sbjct: 802 L-----EAFKGSDEENYAAIIEG 819
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/408 (25%), Positives = 175/408 (42%), Gaps = 58/408 (14%)
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
AL +F +A +G+ P + N +++ + E +K E + V KG+ PD ++ I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAIN 268
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
A C G + EA LF +M V+P+ T+ ++ + G + AF ++M RG
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM-- 326
Query: 293 DFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
P+L+T++ L+ GL +R+ +A +L+ M + G P+ + YN ++ F +
Sbjct: 327 ------EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 353 LKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
L KA E+K M K + L TY +L++G Y G +L +EM
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKG-------------YCKNGQADNAERLLKEML 427
Query: 413 RNGYLPDSVTLGVFIN-------GLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
G+ +V G F + L + +LLR +S P + TLI
Sbjct: 428 SIGF---NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS------PGGGLLTTLIS 478
Query: 466 N-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM--SVKPDGAV------------- 509
C + + A+ L F +G V + ++ +H + + K D A
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 510 ----YNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALY 553
YN LI C + +++A+ EMV G P ++ LI L+
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLF 586
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 124/277 (44%), Gaps = 14/277 (5%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEE 68
V N +I G C +KK+ E F L ++P ++ +I L ++EE
Sbjct: 541 VSYNTLISG-------CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A + + R G+ PD TY+ +I G CK E +D+M + + PN Y LI
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 129 LLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
C + L A ++ +M G P+ ATY I RVE+A +F M GL P
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP 713
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
++ Y A+I + + G++ K + E K + P+ +TY+ +I G++ EA L
Sbjct: 714 NVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLL 773
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
EM + P + TY +Y Y G AF DE
Sbjct: 774 NEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 228/497 (45%), Gaps = 47/497 (9%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V F ++ + + ++ + + ++M G+ D T+N +I C + A+ +
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+M G P+ T SL++ C + A + ++M+ G+ P + YN I +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
++RV A F + +G+ P++V+Y A+++ C A + ++ ++K I P+ +T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
YSAL+ A G + EA +LF EM+R + P TY+ L+ CL A + D M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
+G L D +V++N LI+G C +RV++ + + R M + GL + V+YNT++ G
Sbjct: 323 SKGCLAD--------VVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK 406
F Q ++ KA E +MD I D +TY L+ GL D G ++K
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD-------------NGELEKALV 421
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
+ +M + D VT I G+ K A + + S + L P + Y T++
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL-SLKGLK-PDIVTYTTMMSG 479
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
T+GL++E + +M K +G + N G++ +
Sbjct: 480 ---------------LCTKGLLHEVEALYTKM-----KQEGLMKNDCTLSD---GDITLS 516
Query: 527 YEMYKEMVHYGFFPHMF 543
E+ K+M+ G+ P +
Sbjct: 517 AELIKKMLSCGYAPSLL 533
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 188/379 (49%), Gaps = 24/379 (6%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP V+ ++ C + R+ +A +V +M G PD YNA+I +CK + + A +
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC--TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+ ++ +G+ PN TY +L++ LC + W D A ++ ++MI P+V TY+ + A+
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA-RLLSDMIKKKITPNVITYSALLDAF 270
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ + +V +A +F M + PD+V+Y+++I+ C +++A ++ V KG L D
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
V+Y+ LI C + + LF EM + + + TY L+ + G+ A +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M G SP + T+N L+ GLC +++AL I M + + D V+Y TV+
Sbjct: 391 MDFFG--------ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
G C+ ++++A+ L + K + D TY ++M GL +G + +V
Sbjct: 443 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC-------------TKGLLHEV 489
Query: 405 FKLEREMTRNGYLPDSVTL 423
L +M + G + + TL
Sbjct: 490 EALYTKMKQEGLMKNDCTL 508
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 180/359 (50%), Gaps = 22/359 (6%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEE 68
V + ++ GF C+ +V + L+ +P +V++ +I LC+ +R+ +
Sbjct: 156 VTIGSLVNGF-------CRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A + +E+ RKG+ P+ TY AL+ G+C A L M + ++PN TY +L+D
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 129 -LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
+ + +A ++F EM+ P + TY+ I +R+++A +F M +G
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D+VSYN +I+ FC+ +E +++ E ++G++ + VTY+ LIQ G + +A + F
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFF 388
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
+M +SP TY L+ C GE A + ++M+ R + +VT+
Sbjct: 389 SQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKR--------EMDLDIVTYTT 440
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
+I G+C +V+EA + + GL PD V+Y T++ G C L + L +M ++
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 163/309 (52%), Gaps = 15/309 (4%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK K+V + F + + P +V++ ++ LC R +A ++ +M +K + P+
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNE 144
TY+AL+ K +L A EL+++M + P+ TY SLI+ LC +D+A ++F+
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M++ G L V +YN I + ++RVE + +F M++RGL + V+YN +I F Q G+
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
++KA E ++ GI PD TY+ L+ LC G L +A +F +M + ++ TYT
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
++ C G+ A+ L + +G PD +VT+ ++ GLC+ + E +
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPD--------IVTYTTMMSGLCTKGLLHEVEAL 492
Query: 325 LRGMPEMGL 333
M + GL
Sbjct: 493 YTKMKQEGL 501
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 199/444 (44%), Gaps = 55/444 (12%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
L+ A +F++M+ S PS+ +N+ ++A + ++ + + + M G+ DL ++N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
VI+ FC ++ AL I + ++ G PD VT +L+ C + + +A L +M+
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P Y ++ + C + AF E+ +G P++VT+ AL++GLC+
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG--------IRPNVVTYTALVNGLCN 237
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
R +A +L M + ++P+ ++Y+ +L F + ++ +A EL EM I D T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 375 YESLMEG----------------------LSDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
Y SL+ G L+D V+Y++L+N + ++ KL REM+
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM----ISSQCLTMPSYIIYDTLIENCS 468
+ G + ++VT I G + A+ +M IS P Y+ L+
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS------PDIWTYNILLG--- 408
Query: 469 YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYE 528
GL + G + +A + E M + D Y +I C+ G V +A+
Sbjct: 409 --------GLCDN----GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 529 MYKEMVHYGFFPHMFSVLSLIHAL 552
++ + G P + + +++ L
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 136/262 (51%), Gaps = 9/262 (3%)
Query: 35 KKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICG 94
K++ E + ++P +V++ +I LC +R++EA ++ M KG D +YN LI G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 95 MCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPS 153
CK + + ++L+ +M RGL N TY +LI +DKA + F++M G P
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 154 VATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKA 213
+ TYN + + +E+AL IF M +R + D+V+Y VI C+ G++E+A +
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
KG+ PD VTY+ ++ LC +G L E L+ +M + + ++ T + G
Sbjct: 460 SLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------G 511
Query: 274 EFSMAFHLHDEMRHRGFLPDFV 295
+ +++ L +M G+ P +
Sbjct: 512 DITLSAELIKKMLSCGYAPSLL 533
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 165/385 (42%), Gaps = 40/385 (10%)
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
++ A+ +FS M + P +V +N ++S + + + + + + GI D T++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
+I C + A + +ML+ P T L+ +C S A L D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
G+ PD +V +NA+I LC +RV++A + + G+ P+ V+Y ++ G C
Sbjct: 185 GYKPD--------IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLE 408
A L +M +K I + +TYS+LL+ + G + + +L
Sbjct: 237 NSSRWSDAARLLSDMIKKKI-------------TPNVITYSALLDAFVKNGKVLEAKELF 283
Query: 409 REMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-C 467
EM R PD VT INGL A + M+S CL + Y+TLI C
Sbjct: 284 EEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA--DVVSYNTLINGFC 341
Query: 468 SYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAY 527
+ + L ++ S RGLV+ YN LI + G+V+KA
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNT----------------VTYNTLIQGFFQAGDVDKAQ 385
Query: 528 EMYKEMVHYGFFPHMFSVLSLIHAL 552
E + +M +G P +++ L+ L
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGL 410
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 139/334 (41%), Gaps = 43/334 (12%)
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
L +A DLF +M++ PS + RL+ A + ++ + L +M G D
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND------ 119
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
L TFN +I+ C +V AL IL M ++G PD V+ +++ GFC+ + A
Sbjct: 120 --LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA--- 174
Query: 360 KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
V + +K++ E Y+ D V Y+++++ + F +E+ R G P+
Sbjct: 175 -VSLVDKMV---EIGYKP------DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN 224
Query: 420 SVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIY----DTLIENCSYVEFK-- 473
VT +NGL + S A +L MI + P+ I Y D ++N +E K
Sbjct: 225 VVTYTALVNGLCNSSRWSDAARLLSDMIKKK--ITPNVITYSALLDAFVKNGKVLEAKEL 282
Query: 474 --------------SAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
+ L+ ++EA + M + D YN LI C+
Sbjct: 283 FEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCK 342
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALY 553
V ++++EM G + + +LI +
Sbjct: 343 AKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 82/176 (46%), Gaps = 12/176 (6%)
Query: 478 LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYG 537
LV F R V++A ++M + KPD YN +I C+ VN A++ +KE+ G
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 538 FFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVLNEIEVKKCKI---D 594
P++ + +L++ L + S+ ++ + ++ + + L + VK K+
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 595 ALLNALAKIAVDGML-----LDRGKCSYASDRFTPATIIVFSIFILKG-LQDVFSF 644
L + ++++D + L G C + DR A + F + + KG L DV S+
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLH--DRIDEANQM-FDLMVSKGCLADVVSY 333
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 206/424 (48%), Gaps = 25/424 (5%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
+F +I LC++ ++++AK + M G+ P TYN L+ G + A + +M
Sbjct: 227 TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM 286
Query: 112 RVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
+ +G P+ +TY ++ +C +A +V EM G +P +YN I ++ +E
Sbjct: 287 KSKGFQPDMQTYNPILSWMCNE--GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLE 344
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
A M ++G+ P +YN +I + ++E A + E EKGI+ D VTY+ LI
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILI 404
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
C G +AF L EM+ + P+ TYT L+Y C + A L +++ +G
Sbjct: 405 NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMK 464
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
PD LV N L+ G C++ +D A +L+ M M ++PD V+YN ++ G C
Sbjct: 465 PD--------LVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
+ ++A EL EM + I D ++Y++L++ Y +G+ + F + EM
Sbjct: 517 KFEEARELMGEMKRRGIK-------------PDHISYNTLISGYSKKGDTKHAFMVRDEM 563
Query: 412 TRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVE 471
G+ P +T + GL+K +A+ +L M S + P+ + ++IE S ++
Sbjct: 564 LSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV--PNDSSFCSVIEAMSNLD 621
Query: 472 FKSA 475
K +
Sbjct: 622 AKKS 625
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/495 (27%), Positives = 219/495 (44%), Gaps = 72/495 (14%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F +++ C+ ++EA E M KG P ET N ++ + ++ + A Y M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 113 VRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
+ N T+ +I++LC L KA M G P++ TYN + + R+E
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
A I S M +G PD+ +YN ++S C +G +A E+ E E G++PD V+Y+ LI
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILI 334
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY------------------------ 267
+ G L AF EM++ + P+ TY L++
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 268 -----------AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
YC G+ AF LHDEM G P QF T+ +LI+ LC
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP---TQF-----TYTSLIYVLCRKN 446
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
+ EA + + G+ PD V NT++ G C I + +A+ L EMD I D+ TY
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYN 506
Query: 377 SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATT 436
LM GL E G ++ +L EM R G PD ++ I+G +KK T
Sbjct: 507 CLMRGLCGE-------------GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDT 553
Query: 437 SIAKGILLRMISSQCLTM---PSYIIYDTLIENCSY-VEFKSAVGLVKDFSTRGLV-NEA 491
A M+ + L++ P+ + Y+ L++ S E + A L+++ + G+V N++
Sbjct: 554 KHA-----FMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDS 608
Query: 492 AIAH--ERMHNMSVK 504
+ E M N+ K
Sbjct: 609 SFCSVIEAMSNLDAK 623
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 223/497 (44%), Gaps = 52/497 (10%)
Query: 88 YNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMI 146
++ L+ C++R + A+E + M+ +G P T ++ LL ++ A+ + +M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE 206
+V T+N I ++++A G M G+ P +V+YN ++ F G +E
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 207 KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLM 266
A I +E KG PD TY+ ++ +C +G A ++ EM + P + +Y L+
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILI 334
Query: 267 YAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILR 326
G+ MAF DEM +G +P F T+N LIHGL +++ A ++R
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTF--------YTYNTLIHGLFMENKIEAAEILIR 386
Query: 327 GMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM------- 379
+ E G+ D+V+YN ++ G+CQ + KKA+ L EM I ++TY SL+
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKN 446
Query: 380 --------------EGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
+G+ D V ++L++ + A GNM + F L +EM PD VT
Sbjct: 447 KTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYN 506
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFST 484
+ GL + A+ ++ M P +I Y+TLI +S
Sbjct: 507 CLMRGLCGEGKFEEARELMGEMKRRG--IKPDHISYNTLISG---------------YSK 549
Query: 485 RGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFS 544
+G A + + M ++ P YN L+ + A E+ +EM G P+ S
Sbjct: 550 KGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSS 609
Query: 545 VLSLIHALY-YDRKNSE 560
S+I A+ D K S+
Sbjct: 610 FCSVIEAMSNLDAKKSD 626
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 154/317 (48%), Gaps = 12/317 (3%)
Query: 32 CKEKKVGETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETY 88
C E + E ++ + P VS+ +I+ +E A EM ++G+ P TY
Sbjct: 306 CNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTY 365
Query: 89 NALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIA 147
N LI G+ + A L ++R +G+ + TY LI+ C KA+ + +EM+
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMT 425
Query: 148 SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEK 207
G P+ TY I + +A +F + +G+ PDLV N ++ C G +++
Sbjct: 426 DGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDR 485
Query: 208 ALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
A + E I PDDVTY+ L++ LC +G EA +L EM R + P + +Y L+
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
Y G+ AF + DEM G F+P+L+T+NAL+ GL + + A +LR
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLG--------FNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Query: 328 MPEMGLSPDAVSYNTVL 344
M G+ P+ S+ +V+
Sbjct: 598 MKSEGIVPNDSSFCSVI 614
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 45/294 (15%)
Query: 15 VRMNVMIRGFAT----ESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAK 70
V N++IRG + E + +++ V + M P ++ +I L + ++E A+
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQG-----MVPTFYTYNTLIHGLFMENKIEAAE 382
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
++RE+ KG+ D TYN LI G C+ + A L+D+M G+ P + TY SLI +L
Sbjct: 383 ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVL 442
Query: 131 C------------------------------------TWWLDKAYKVFNEMIASGFLPSV 154
C +D+A+ + EM P
Sbjct: 443 CRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDD 502
Query: 155 ATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
TYN + + E+A + M RG+ PD +SYN +IS + + G+ + A ++ E
Sbjct: 503 VTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDE 562
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
+ G P +TY+AL++ L A +L EM + P++S++ ++ A
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 122/304 (40%), Gaps = 47/304 (15%)
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
+ S + F+ L+ C L VDEA+ M E G P + N +L ++ ++ A+
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 359 LKVEMDEKIIWLDEYTYESLMEGLSDE----------------------VTYSSLLNDYF 396
+M I + YT+ ++ L E VTY++L+ +
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 397 AQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPS 456
+G ++ + EM G+ PD T ++ + + S +LR + L +P
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRAS----EVLREMKEIGL-VPD 326
Query: 457 YIIYDTLIENCS----------YVEFKSAVGLVKDFST-----RGL-----VNEAAIAHE 496
+ Y+ LI CS Y + G+V F T GL + A I
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR 386
Query: 497 RMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDR 556
+ + D YN+LI +C+ G+ KA+ ++ EM+ G P F+ SLI+ L
Sbjct: 387 EIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKN 446
Query: 557 KNSE 560
K E
Sbjct: 447 KTRE 450
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/491 (25%), Positives = 228/491 (46%), Gaps = 52/491 (10%)
Query: 88 YNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC------TWWLDKAYKV 141
Y +I + +++ ++ +++M G P + L+ + WW
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWW-----SF 151
Query: 142 FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
FNE S + V ++ I + +E++ + + E G SP++V Y +I C+
Sbjct: 152 FNEN-KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCK 210
Query: 202 DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
GE+EKA ++ E + G++ ++ TY+ LI L G + F+++ +M V P+ T
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA 321
Y +M C G AF + DEMR RG S ++VT+N LI GLC +++EA
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGV--------SCNIVTYNTLIGGLCREMKLNEA 322
Query: 322 LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG 381
++ M G++P+ ++YNT++ GFC + +L KA L ++ + G
Sbjct: 323 NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR--------------G 368
Query: 382 LSDE-VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAK 440
LS VTY+ L++ + +G+ K+ +EM G P VT + I+ + + ++ K
Sbjct: 369 LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR--SDNMEK 426
Query: 441 GILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHN 500
I LR+ + +P Y LI F +G +NEA+ + M
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHG---------------FCIKGQMNEASRLFKSMVE 471
Query: 501 MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSE 560
+ +P+ +YN +I +C+ G+ +A ++ KEM P++ S +I L +RK+ E
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 561 MGWVIRNTLRS 571
++ + S
Sbjct: 532 AERLVEKMIDS 542
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 181/361 (50%), Gaps = 15/361 (4%)
Query: 32 CKEKKVGETFGLL------RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C+ ++ ++F LL P +V + +I C+K +E+AK++ EM + GL +
Sbjct: 174 CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANE 233
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNE 144
TY LI G+ K E+Y++M+ G+ PN TY +++ LC K A++VF+E
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M G ++ TYN I ++ +A + M G++P+L++YN +I FC G+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L KAL + + +G+ P VTY+ L+ C +G A + EM + PS TYT
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ + A L M G +PD + T++ LIHG C +++EA +
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPD--------VHTYSVLIHGFCIKGQMNEASRL 465
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD 384
+ M E P+ V YNT++ G+C+ +A +L EM+EK + + +Y ++E L
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 385 E 385
E
Sbjct: 526 E 526
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 197/399 (49%), Gaps = 22/399 (5%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
SF +IK CE +E++ +++ E+ G +P+ Y LI G CK + A +L+ +M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 112 RVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
GL NERTY LI+ L + K ++++ +M G P++ TYN + R
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
+ A +F M ERG+S ++V+YN +I C++ +L +A ++ + GI P+ +TY+ L
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
I C G L +A L ++ +SPS TY L+ +C G+ S A + EM RG
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG- 403
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
PS VT+ LI + +++A+ + M E+GL PD +Y+ ++ GFC
Sbjct: 404 -------IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIK 456
Query: 351 RELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLERE 410
++ +A L M EK +EV Y++++ Y +G+ + KL +E
Sbjct: 457 GQMNEASRLFKSMVEKNCE-------------PNEVIYNTMILGYCKEGSSYRALKLLKE 503
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISS 449
M P+ + I L K+ + A+ ++ +MI S
Sbjct: 504 MEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 149/291 (51%), Gaps = 9/291 (3%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P L ++ V+ +LC+ R ++A +V EM +G++ + TYN LI G+C+ + A ++
Sbjct: 266 PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKV 325
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
DQM+ G++PN TY +LID C L KA + ++ + G PS+ TYN ++ +
Sbjct: 326 VDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR 385
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
A + M ERG+ P V+Y +I F + +EKA++++ E G++PD T
Sbjct: 386 KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHT 445
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
YS LI C++G + EA LF M+ + P+ Y ++ YC G A L EM
Sbjct: 446 YSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
+ + +P++ ++ +I LC + EA ++ M + G+ P
Sbjct: 506 EK--------ELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 129/249 (51%), Gaps = 2/249 (0%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEV 72
++V N +I G E ++ + KV + + P L+++ +I C ++ +A +
Sbjct: 302 NIVTYNTLIGGLCREMKLN-EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC- 131
R++ +GL+P TYN L+ G C+ + A ++ +M RG+ P++ TY LID
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Query: 132 TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+ ++KA ++ M G +P V TY+ I + ++ +A +F +M E+ P+ V
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI 480
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN +I +C++G +AL++ E EK + P+ +Y +I+ LC + EA L +M+
Sbjct: 481 YNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMI 540
Query: 252 RGDVSPSNS 260
+ PS S
Sbjct: 541 DSGIDPSTS 549
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 183/376 (48%), Gaps = 22/376 (5%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERME 67
+V +N ++ GF C ++ + L+ +P V+F +I L +
Sbjct: 148 IVTLNSLLNGF-------CHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
EA ++ M ++G PD TY A++ G+CK + A+ L ++M + N Y ++I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 128 DLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
D LC + D A +F EM G P+V TY+ I+ + R A + S M ER ++
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
P+LV+++A+I F + G+L KA ++ E +++ I P+ TYS+LI C+ L EA +
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
M+R D P+ TY L+ +C L EM RG + + VT+
Sbjct: 381 LELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGN--------TVTYT 432
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
LIHG D A + + M +G+ P+ ++YN +L G C+ +L KA + +
Sbjct: 433 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 492
Query: 367 IIWLDEYTYESLMEGL 382
+ D YTY ++EG+
Sbjct: 493 TMEPDIYTYNIMIEGM 508
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 192/390 (49%), Gaps = 22/390 (5%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L EP +V+ ++ C R+ +A +V +M G PD T+ LI G+
Sbjct: 142 LGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASE 201
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFIT 162
AV L D+M RG P+ TY ++++ LC D A + N+M A+ +V Y+ I
Sbjct: 202 AVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVID 261
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ + AL +F+ M +G+ P++++Y+++IS C G A + ++ +E+ I P
Sbjct: 262 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINP 321
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ VT+SALI A +G L +A L+ EM++ + P+ TY+ L+ +C++ A +
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
+ M + LP+ +VT+N LI+G C +RVD+ + + R M + GL + V+Y T
Sbjct: 382 ELMIRKDCLPN--------VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTT 433
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ GF Q R+ A + +M + + TY L++GL G +
Sbjct: 434 LIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC-------------KNGKLA 480
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNK 432
K + + R+ PD T + I G+ K
Sbjct: 481 KAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 206/432 (47%), Gaps = 30/432 (6%)
Query: 38 GETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCK 97
GE +L + L ++ +I C R+ A ++ +M + G PD T N+L+ G C
Sbjct: 101 GEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCH 160
Query: 98 VRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVAT 156
+ AV L DQM G P+ T+ +LI L +A + + M+ G P + T
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Query: 157 YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
Y + + AL + + M + ++V Y+ VI C+ + AL + E
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 280
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
KG+ P+ +TYS+LI LC G +A L +M+ ++P+ T++ L+ A+ G+
Sbjct: 281 NKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLV 340
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A L++EM R P++ T+++LI+G C L+R+ EA +L M P+
Sbjct: 341 KAEKLYEEMIKR--------SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
V+YNT++ GFC+ + + K EL EM ++ + + + VTY++L++ +F
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGL-------------VGNTVTYTTLIHGFF 439
Query: 397 AQ---GNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
N Q VFK +M G P+ +T + ++GL K +AK +++ +
Sbjct: 440 QARDCDNAQMVFK---QMVSVGVHPNILTYNILLDGLCKNG--KLAKAMVVFEYLQRSTM 494
Query: 454 MPSYIIYDTLIE 465
P Y+ +IE
Sbjct: 495 EPDIYTYNIMIE 506
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 203/460 (44%), Gaps = 52/460 (11%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
LD A +F M S PS+ ++K ++A + + + M G+S +L +YN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+I+ FC+ L AL + + ++ G PD VT ++L+ C + +A L +M+
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P T+T L++ L + S A L D M RG PD LVT+ A+++GLC
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPD--------LVTYGAVVNGLCK 230
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
D AL +L M + + V Y+TV+ C+ R A L EM+ K + + T
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 375 YESLMEGL------SDE----------------VTYSSLLNDYFAQGNMQKVFKLEREMT 412
Y SL+ L SD VT+S+L++ + +G + K KL EM
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMI 350
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVE 471
+ P+ T ING AK +L MI CL P+ + Y+TLI C
Sbjct: 351 KRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCL--PNVVTYNTLINGFCKAKR 408
Query: 472 FKSAVGLVKDFSTRGLV-------------------NEAAIAHERMHNMSVKPDGAVYNL 512
+ L ++ S RGLV + A + ++M ++ V P+ YN+
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
L+ C+ G + KA +++ + P +++ +I +
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 137/271 (50%), Gaps = 9/271 (3%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEE 68
+ NV+I +S+ CK + + L + P ++++ +I LC R +
Sbjct: 249 IEANVVIYSTVIDSL--CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSD 306
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A ++ +M + + P+ T++ALI K ++ A +LY++M R + PN TY SLI+
Sbjct: 307 ASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Query: 129 LLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
C L +A ++ MI LP+V TYN I + ++RV++ + +F M++RGL
Sbjct: 367 GFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
+ V+Y +I F Q + + A + + V G+ P+ +TY+ L+ LC G L +A +F
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMA 278
+ R + P TY ++ C G++ M
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 187/376 (49%), Gaps = 31/376 (8%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP +V+ +I C+ R+ +A ++V +M G PD YN +I G CK+ + AVE
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCT--WWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
L+D+M G+ + TY SL+ LC W D A ++ +M+ +P+V T+ I +
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA-RLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ + +A+ ++ M R + PD+ +YN++I+ C G +++A ++ V KG LPD
Sbjct: 255 VKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDV 314
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+ LI C + E LF EM + + TY ++ Y G A +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M R P++ T++ L++GLC RV++AL + M + + D +YN V+
Sbjct: 375 MDSR-----------PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL-MEGLS-DEVTYSSLLNDYFAQGNMQ 402
G C+I ++ A++L + SL +GL D V+Y+++++ + +
Sbjct: 424 HGMCKIGNVEDAWDL---------------FRSLSCKGLKPDVVSYTTMISGFCRKRQWD 468
Query: 403 KVFKLEREMTRNGYLP 418
K L R+M +G LP
Sbjct: 469 KSDLLYRKMQEDGLLP 484
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 219/480 (45%), Gaps = 50/480 (10%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
+EE ++ +M + P ++ ++ + K +N + L+ M V G+ + +Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 126 LIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
+I+ LC A V +M+ G+ P V T + I + RV A+ + S M E G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
PD+V YN +I C+ G + A+E+ G+ D VTY++L+ LC G +A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
L +M+ D+ P+ T+T ++ + G+FS A L++EM R PD + T
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD--------VFT 281
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+N+LI+GLC RVDEA +L M G PD V+YNT++ GFC+ + + + +L EM
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 365 EKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGN---MQKVFKLEREMTRNGYLPDSV 421
++ + + D +TY++++ YF G Q++F +R P+
Sbjct: 342 QRGL-------------VGDTITYNTIIQGYFQAGRPDAAQEIF------SRMDSRPNIR 382
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQC-LTMPSYIIYDTLIENCSYVEFKSAVGLVK 480
T + + GL A + M S+ L + +Y I + C + A L +
Sbjct: 383 TYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI--VIHGMCKIGNVEDAWDLFR 440
Query: 481 DFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
S +GL KPD Y +I CR+ +K+ +Y++M G P
Sbjct: 441 SLSCKGL----------------KPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 186/412 (45%), Gaps = 34/412 (8%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R P +V F V+ ++ + + + + M G+ D +YN +I +C+ + A
Sbjct: 64 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIA 123
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+ + +M G P+ T SLI+ C + A + ++M GF P V YN I
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDG 183
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
V A+ +F M G+ D V+YN++++ C G A + + V + I+P+
Sbjct: 184 SCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPN 243
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+T++A+I +G EA L+ EM R V P TY L+ C+ G A + D
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
M +G LPD +VT+N LI+G C +RVDE + R M + GL D ++YNT+
Sbjct: 304 LMVTKGCLPD--------VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTI 355
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-------------------- 383
+ G+ Q A E+ MD + + TY L+ GL
Sbjct: 356 IQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEI 412
Query: 384 --DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
D TY+ +++ GN++ + L R ++ G PD V+ I+G +K
Sbjct: 413 ELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK 464
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/475 (23%), Positives = 187/475 (39%), Gaps = 110/475 (23%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
L++ +F +MI S LPS+ ++K ++ S+ + + +F M G+ DL SYN
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
VI+ C+ AL + + ++ G PD VT S+LI C QG+ FD
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC-QGN--RVFD--------- 157
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
A L +M GF PD VI +N +I G C
Sbjct: 158 -----------------------AIDLVSKMEEMGFRPDVVI--------YNTIIDGSCK 186
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+ V++A+ + M G+ DAV+YN+++ G C A L +M + I
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI------ 240
Query: 375 YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
+ + +T++++++ + +G + KL EMTR PD T INGL
Sbjct: 241 -------VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 435 TTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNE--- 490
AK +L M++ CL P + Y+TLI C L ++ + RGLV +
Sbjct: 294 RVDEAKQMLDLMVTKGCL--PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 491 ------------------------------------------------AAIAHERMHNMS 502
A + E M
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSE 411
Query: 503 VKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
++ D YN++I C+ GNV A+++++ + G P + S ++I R+
Sbjct: 412 IELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 10/232 (4%)
Query: 33 KEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCE 86
KE K E L ++P + ++ +I LC R++EAK+++ M KG PD
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEM 145
TYN LI G CK + + +L+ +M RGL + TY ++I D A ++F+ M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGEL 205
+ P++ TY+ + + RVE+AL +F M + + D+ +YN VI C+ G +
Sbjct: 376 DSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 206 EKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
E A ++ KG+ PD V+Y+ +I C + ++ L+ +M + P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 134/322 (41%), Gaps = 38/322 (11%)
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
+L E DLF +M++ PS +++++ + + L M G D
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD----- 103
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
L ++N +I+ LC R AL ++ M + G PD V+ ++++ GFCQ + A +
Sbjct: 104 ---LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 359 LKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLP 418
L +M+E M D V Y+++++ G + +L M R+G
Sbjct: 161 LVSKMEE-------------MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRA 207
Query: 419 DSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGL 478
D+VT + GL S A ++ M+ +P+ I + +I+
Sbjct: 208 DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD--IVPNVITFTAVIDV------------ 253
Query: 479 VKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
F G +EA +E M V PD YN LI C G V++A +M MV G
Sbjct: 254 ---FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 539 FPHMFSVLSLIHALYYDRKNSE 560
P + + +LI+ ++ E
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDE 332
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 17/163 (10%)
Query: 410 EMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSY 469
+M + GY PD VT+ ING + A ++ +M + P +IY+T+I+
Sbjct: 129 KMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM--EEMGFRPDVVIYNTIIDGSCK 186
Query: 470 VEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEM 529
+ GLVN+A +RM V+ D YN L+ C G + A +
Sbjct: 187 I---------------GLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 530 YKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSC 572
++MV P++ + ++I + K SE + R C
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC 274
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 173/344 (50%), Gaps = 15/344 (4%)
Query: 32 CKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C ++G+ F L+ + EP +V + +I LC+ + A E++ EM +KGL D
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNE 144
TYN L+ G+C A + M R ++P+ T+ +LID+ LD+A +++ E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
MI S P+ TYN I R+ A F MA +G P++V+YN +IS FC+
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+++ +++ +G D TY+ LI C G L A D+F M+ V+P T+
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L++ C+ GE A D+MR + +V +N +IHGLC ++V++A +
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRES--------EKYIGIVAYNIMIHGLCKADKVEKAWEL 443
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKII 368
+P G+ PDA +Y ++ G C+ ++A EL M E+ I
Sbjct: 444 FCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 215/479 (44%), Gaps = 46/479 (9%)
Query: 6 ATLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRME---------------PYL 50
+T K FR +V N++ G A + +EK +R E P +
Sbjct: 12 STAKGFRRVVNPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSI 71
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
V F ++ R E ++M G++ D ++ LI C+ + A+ + +
Sbjct: 72 VDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGK 131
Query: 111 MRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
M G P+ T+ SL+ C + A+ + M+ SG+ P+V YN I +
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGE 191
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
+ AL + + M ++GL D+V+YN +++ C G A + + +++ I PD VT++A
Sbjct: 192 LNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTA 251
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
LI QG+L EA +L+ EM++ V P+N TY ++ C+ G A D M +G
Sbjct: 252 LIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 290 FLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
P+ +VT+N LI G C VDE + + + M G + D +YNT++ G+CQ
Sbjct: 312 CFPN--------VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 350 IRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS------------DE----------VT 387
+ +L+ A ++ M + + D T+ L+ GL D+ V
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Query: 388 YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
Y+ +++ ++K ++L + G PD+ T + I GL K A ++ RM
Sbjct: 424 YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 164/378 (43%), Gaps = 47/378 (12%)
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ F E A + E V LP V ++ L+ A +M +S
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
++T L++ +C S A + +M G+ PS+VTF +L+HG C +
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGY--------EPSIVTFGSLLHGFCLVN 155
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
R+ +A ++ M + G P+ V YNT++ G C+ EL A EL EM++K + D TY
Sbjct: 156 RIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYN 215
Query: 377 SLMEGL----------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
+L+ GL D VT+++L++ + QGN+ + +L +EM ++
Sbjct: 216 TLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Query: 415 GYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKS 474
P++VT INGL AK M S C P+ + Y+TLI + +F+
Sbjct: 276 SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCF--PNVVTYNTLIS--GFCKFR- 330
Query: 475 AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
+V+E +RM D YN LI +C+ G + A +++ MV
Sbjct: 331 ------------MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 535 HYGFFPHMFSVLSLIHAL 552
P + + L+H L
Sbjct: 379 SRRVTPDIITHCILLHGL 396
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 123/247 (49%), Gaps = 1/247 (0%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +V+F +I ++ ++EA+E+ +EM + + P+ TYN++I G+C + A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+ +D M +G PN TY +LI C + +D+ K+F M GF + TYN I Y
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
++ AL IF M R ++PD++++ ++ C +GE+E AL + E
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI 421
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
V Y+ +I LC + +A++LF + V P TYT ++ C G A L
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Query: 285 MRHRGFL 291
M+ G +
Sbjct: 482 MKEEGII 488
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 220/486 (45%), Gaps = 45/486 (9%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
V++ +I + +MEEA+ +M R G A ++N LI G CK A + D+
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 111 MRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
M G+ P TY I LC + +D A ++ + M A P V +YN + Y+ +
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHGYIKMGK 389
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
+A +F + + P +V+YN +I C+ G LE A +K E + I PD +TY+
Sbjct: 390 FVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTT 449
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
L++ G+L A +++ EMLR + P YT +G+ AF LH+EM
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 290 FLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
+P L +N I GLC + + +A+ R + +GL PD V+Y TV+ G+ +
Sbjct: 510 -------HHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 350 IRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLER 409
+ K A L EM L + Y S+ +TY L+ + G +++ F+
Sbjct: 563 NGQFKMARNLYDEM------LRKRLYPSV-------ITYFVLIYGHAKAGRLEQAFQYST 609
Query: 410 EMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI-ENCS 468
EM + G P+ +T + G+ K A L +M + P+ Y LI +NC
Sbjct: 610 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM--EEEGIPPNKYSYTMLISKNCD 667
Query: 469 YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYE 528
+ +++ V L K+ M + ++PDG + L F H + + ++ E
Sbjct: 668 FEKWEEVVKLYKE----------------MLDKEIEPDGYTHRAL-FKHLEKDHESREVE 710
Query: 529 MYKEMV 534
+ ++
Sbjct: 711 FLERLL 716
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 160/341 (46%), Gaps = 43/341 (12%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +V++ +I LCE +E A+ + EM + + PD TY L+ G K N+ A
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 464
Query: 106 ELYDQMRVRGLSPNERTYMS-LIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E+YD+M +G+ P+ Y + + L DKA+++ EM+A+
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDH-------------- 510
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+PDL YN I C+ G L KA+E + + G++PD
Sbjct: 511 --------------------HAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+ +I+ G A +L+ EMLR + PS TY L+Y + G AF E
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M+ RG P+++T NAL++G+C +DEA L M E G+ P+ SY ++
Sbjct: 611 MKKRG--------VRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLI 662
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE 385
C + ++ +L EM +K I D YT+ +L + L +
Sbjct: 663 SKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 703
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 215/499 (43%), Gaps = 53/499 (10%)
Query: 75 EMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTW 133
+M RKG P N ++ + R M A +Y+ M G+ P T+ +++D
Sbjct: 193 KMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252
Query: 134 WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
L++ K++ EM S TYN I + + ++E+A M G + S+N
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+I +C+ G + A + E + GI P TY+ I ALC G + +A +L M
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM--- 369
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
+P +Y LM+ Y +G+F A L D++R PS+VT+N LI GLC
Sbjct: 370 -AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR--------AGDIHPSIVTYNTLIDGLC 420
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
++ A + M + PD ++Y T++ GF + L A E+ EM K I D Y
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480
Query: 374 TYES-----LMEGLSDE------------------VTYSSLLNDYFAQGNMQKVFKLERE 410
Y + L G SD+ Y+ ++ GN+ K + +R+
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYV 470
+ R G +PD VT I G + +A+ + M+ + PS I Y LI Y
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY--PSVITYFVLI----YG 594
Query: 471 EFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMY 530
K+ G + +A M V+P+ +N L++ C+ GN+++AY
Sbjct: 595 HAKA-----------GRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYL 643
Query: 531 KEMVHYGFFPHMFSVLSLI 549
+M G P+ +S LI
Sbjct: 644 CKMEEEGIPPNKYSYTMLI 662
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R+ P ++++ +I + R+E+A + EM ++G+ P+ T+NAL+ GMCK N+ A
Sbjct: 580 RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTW--WLDKAYKVFNEMIASGFLPSVATY 157
+M G+ PN+ +Y LI C + W ++ K++ EM+ P T+
Sbjct: 640 YRYLCKMEEEGIPPNKYSYTMLISKNCDFEKW-EEVVKLYKEMLDKEIEPDGYTH 693
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 139/549 (25%), Positives = 242/549 (44%), Gaps = 54/549 (9%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
++ ++ ++ LC+ E A+ + ++ + G D +L+ G C+ N+ A++++D
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 110 QM-RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
M + +PN +Y LI LC L++A+ + ++M G PS TY I A
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
+++A +F M RG P++ +Y +I C+DG++E+A + + V+ I P +TY
Sbjct: 315 GLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITY 374
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+ALI C G + AF+L M + P+ T+ LM C VG+ A HL M
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
G SP +V++N LI GLC ++ A +L M + PD +++ ++ F
Sbjct: 435 NG--------LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE------------------VTYS 389
C+ + A M K I LDE T +L++G+ +T
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 390 SLLN---DYFAQG-NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR 445
LN D ++G +++ + ++ + G +P VT ++GL + + + IL
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILEL 606
Query: 446 MISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVK 504
M S CL P+ Y +I C + G V EA M + V
Sbjct: 607 MKLSGCL--PNVYPYTIIINGLCQF----------------GRVEEAEKLLSAMQDSGVS 648
Query: 505 PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK---NSEM 561
P+ Y +++ + G +++A E + MV G+ + SL+ +K NSE
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEE 708
Query: 562 GWVIRNTLR 570
V LR
Sbjct: 709 STVSDIALR 717
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 199/420 (47%), Gaps = 24/420 (5%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P VS+ +I LCE R+EEA + +M KG P TY LI +C + A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+D+M RG PN TY LID LC +++A V +M+ PSV TYN I Y
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
RV A + + M +R P++ ++N ++ C+ G+ KA+ + ++ G+ PD V+
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y+ LI LC +G + A+ L M D+ P T+T ++ A+C G+ +A M
Sbjct: 444 YNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
+G S VT LI G+C + + +AL IL + +M + S N +L
Sbjct: 504 RKG--------ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL-- 553
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK 406
L K ++K E++ L + L+ + VTY++L++ G++ F+
Sbjct: 554 ----DMLSKGCKVK----EELAMLGKINKLGLVPSV---VTYTTLVDGLIRSGDITGSFR 602
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
+ M +G LP+ + INGL + A+ +L M S P+++ Y +++
Sbjct: 603 ILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSG--VSPNHVTYTVMVKG 660
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 175/371 (47%), Gaps = 44/371 (11%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P + ++ +I LC ++EEA V R+M + + P TYNALI G CK ++ A E
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIASGFLPSVATYNKFITAYL 165
L M R PN RT+ L++ LC KA + M+ +G P + +YN I
Sbjct: 393 LLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ A + S+M + PD +++ A+I+ FC+ G+ + A + KGI D+V
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 226 TYSALIQALCLQG------------------SLPEAFDLFLEMLR------------GDV 255
T + LI +C G + P + ++ L+ML G +
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 256 S-----PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIH 310
+ PS TYT L+ G+ + +F + + M+ G LP+ + + +I+
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN--------VYPYTIIIN 624
Query: 311 GLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWL 370
GLC RV+EA +L M + G+SP+ V+Y ++ G+ +L +A E M E+ L
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 371 DEYTYESLMEG 381
++ Y SL++G
Sbjct: 685 NDRIYSSLLQG 695
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 171/410 (41%), Gaps = 13/410 (3%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +VS+ +I LC + M A +++ MN + PDC T+ A+I CK A
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAY 164
M +G+S +E T +LID +C + A + ++ L + + N +
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDML 556
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+V++ L + + + GL P +V+Y ++ + G++ + I G LP+
Sbjct: 557 SKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNV 616
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
Y+ +I LC G + EA L M VSP++ TYT ++ Y G+ A
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 285 MRHRGF-LPDFVIQFSPSLVTFNALIHGL-CSLERVDEALGILRGMPEM--GLSPDAVSY 340
M RG+ L D + +S L F G+ S E + + PE L
Sbjct: 677 MVERGYELNDRI--YSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL 734
Query: 341 NTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGN 400
+ G C + E + + ++ L G+ E ++ Y ++
Sbjct: 735 GGCISGLCIFLVTRLCKEGRTDESNDLVQ------NVLERGVFLEKAMDIIMESYCSKKK 788
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQ 450
K +L + ++G++P + + I GL K+ A+ +++ +++S
Sbjct: 789 HTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSN 838
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 168/408 (41%), Gaps = 48/408 (11%)
Query: 225 VTYSALIQALCLQGSLPEAFDLFL-EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+ Y ++ ALC G EA ++F+ ++L+ + T L+ +C A + D
Sbjct: 196 IDYRTIVNALCKNG-YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
M + +P+ V+++ LIHGLC + R++EA G+ M E G P +Y +
Sbjct: 255 VMSKE-------VTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE------------------ 385
+ C + KA+ L EM + + +TY L++GL +
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 386 ----VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG 441
+TY++L+N Y G + F+L M + P+ T + GL + A
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 442 ILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM 501
+L RM+ + P + Y+ LI+ GL ++ G +N A M+
Sbjct: 428 LLKRMLDNG--LSPDIVSYNVLID-----------GLCRE----GHMNTAYKLLSSMNCF 470
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEM 561
++PD + +I C++G + A M+ G + +LI + K +
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Query: 562 GWVIRNTLRSCNLNDSELHQVLNEIEVKKCKIDALLNALAKIAVDGML 609
+++ ++ L V+ ++ K CK+ L L KI G++
Sbjct: 531 LFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLV 578
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 122/275 (44%), Gaps = 20/275 (7%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
ET +R+ S ++ L + +++E ++ ++N+ GL P TY L+ G+ +
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATY 157
++ + + + M++ G PN Y +I+ LC + +++A K+ + M SG P+ TY
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC------QDGELEKALEI 211
+ Y+++ ++++AL AM ERG + Y++++ F + E +I
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDI 714
Query: 212 KAETVEKGILPDDVTYSA------------LIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
+ + + ++ L+ LC +G E+ DL +L V
Sbjct: 715 ALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK 774
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDF 294
+ +M +YC + + L + GF+P F
Sbjct: 775 AMDI-IMESYCSKKKHTKCMELITLVLKSGFVPSF 808
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 229/492 (46%), Gaps = 43/492 (8%)
Query: 55 GVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE--LYDQMR 112
++ L + R + + M +GL PD Y L C + L + + L D+M
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLF--QCCFKQGLYSKKEKLLDEMT 226
Query: 113 VRGLSPNERTY-MSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
G+ PN Y + ++DL +++A K+F M G LP++ TY+ I Y + V
Sbjct: 227 SLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVR 286
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
QA G++ + L P++V + ++ FC+ EL A + V+ G+ P+ Y+ LI
Sbjct: 287 QAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLI 346
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
C G++ EA L EM ++SP TYT L+ C+ + + A L +M++
Sbjct: 347 HGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE--- 403
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
+ PS T+N+LIHG C +++AL + M G+ P+ ++++T++ G+C +R
Sbjct: 404 -----RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR 458
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
++K A L EM K I + D VTY++L++ +F + NM++ +L +M
Sbjct: 459 DIKAAMGLYFEMTIKGI-------------VPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Query: 412 TRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVE 471
G P+ T ++G K+ S+A I ++Q + +++ + LIE
Sbjct: 506 LEAGIHPNDHTFACLVDGFWKEGRLSVA--IDFYQENNQQRSCWNHVGFTCLIE------ 557
Query: 472 FKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYK 531
GL ++ G + A+ M + + PD Y ++ H + + +
Sbjct: 558 -----GLCQN----GYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQC 608
Query: 532 EMVHYGFFPHMF 543
+M+ G P++
Sbjct: 609 DMIKTGILPNLL 620
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 167/339 (49%), Gaps = 15/339 (4%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK V + +GL + + P +V F ++ C+ + A+ + M + G+ P+
Sbjct: 280 CKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNE 144
YN LI G CK NML AV L +M LSP+ TY LI+ LC + +A ++F +
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M PS ATYN I Y +EQAL + S M G+ P++++++ +I +C +
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
++ A+ + E KGI+PD VTY+ALI A + ++ EA L+ +ML + P++ T+
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ + G S+A + E + + + V F LI GLC + A
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQ--------RSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
M G++PD SY ++L G Q + + L+ +M
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDM 610
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 195/410 (47%), Gaps = 31/410 (7%)
Query: 33 KEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALI 92
K++K+ + L ++P + + I +LC +MEEA+++ M + G+ P+ TY+A+I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 93 CGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFL 151
G CK N+ A LY ++ V L PN + +L+D C L A +F M+ G
Sbjct: 277 DGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVD 336
Query: 152 PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI 211
P++ YN I + S + +A+G+ S M LSPD+ +Y +I+ C + ++ +A +
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 212 KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
+ + I P TY++LI C + ++ +A DL EM V P+ T++ L+ YC
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 272 VGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM 331
V + A L+ EM +G +PD +VT+ ALI + EAL + M E
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPD--------VVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 332 GLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL--------- 382
G+ P+ ++ ++ GF + L A + E +++ + + L+EGL
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRA 568
Query: 383 -------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
D +Y S+L + + + L+ +M + G LP+
Sbjct: 569 SRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 148/315 (46%), Gaps = 10/315 (3%)
Query: 11 FRHMVRMNVMIRGFATESVMS--CKEKKVGETFGLL------RMEPYLVSFKGVIKELCE 62
F HMV+ V + ++ CK + E GLL + P + ++ +I LC
Sbjct: 327 FVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCI 386
Query: 63 KERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERT 122
++++ EA + ++M + + P TYN+LI G CK NM A++L +M G+ PN T
Sbjct: 387 EDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIIT 446
Query: 123 YMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMA 181
+ +LID C + A ++ EM G +P V TY I A+ +++AL ++S M
Sbjct: 447 FSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Query: 182 ERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLP 241
E G+ P+ ++ ++ F ++G L A++ E ++ + V ++ LI+ LC G +
Sbjct: 507 EAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYIL 566
Query: 242 EAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI-QFSP 300
A F +M ++P +Y ++ + + L +M G LP+ ++ Q
Sbjct: 567 RASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLA 626
Query: 301 SLVTFNALIHGLCSL 315
N + C L
Sbjct: 627 RFYQANGYVKSACFL 641
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 163/400 (40%), Gaps = 43/400 (10%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
S+ ++ I +L E+AL + M SPD + ++++ + +
Sbjct: 131 SIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGLVRRRRFDSVWVDY 187
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
+ +G++PD Y L Q QG + L EM + P+ YT + C
Sbjct: 188 QLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRD 247
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
+ A + + M+ G LP+ L T++A+I G C V +A G+ + +
Sbjct: 248 NKMEEAEKMFELMKKHGVLPN--------LYTYSAMIDGYCKTGNVRQAYGLYKEILVAE 299
Query: 333 LSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL 392
L P+ V + T++ GFC+ REL A L V M + + + Y Y L+ G
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG----------- 348
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
+ GNM + L EM PD T + INGL + + A + +M + +
Sbjct: 349 --HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER-- 404
Query: 453 TMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
PS Y++LI C + A+ L + + G V+P+ ++
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG----------------VEPNIITFS 448
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
LI +C ++ A +Y EM G P + + +LI A
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 148/361 (40%), Gaps = 60/361 (16%)
Query: 239 SLPEAFDLFLEMLRGDVSPSN--STYTRLMY----------AYCLVGEFSMAFHLHDE-- 284
S EAF LF R VS SN +++ +++ A CL+ H E
Sbjct: 53 SAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPS 112
Query: 285 -MRHRGFLPDFVIQFSP--SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
M HR F IQ SP S+ F+ LI + +EAL + R EM SPD+ +
Sbjct: 113 NMSHRLFNALEDIQ-SPKFSIGVFSLLIMEFLEMGLFEEALWVSR---EMKCSPDSKACL 168
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM------------EGLSDEVT-- 387
++L G + R + M + + D + Y L E L DE+T
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 388 --------YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIA 439
Y+ + D M++ K+ M ++G LP+ T I+G K A
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQA 288
Query: 440 KGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMH 499
G+ ++ ++ L P+ +++ TL++ G K R LV ++ M
Sbjct: 289 YGLYKEILVAELL--PNVVVFGTLVD-----------GFCK---ARELVTARSL-FVHMV 331
Query: 500 NMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNS 559
V P+ VYN LI HC+ GN+ +A + EM P +F+ LI+ L + + +
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 560 E 560
E
Sbjct: 392 E 392
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 206/445 (46%), Gaps = 33/445 (7%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R P +V F V+ + + + + + +M G++ D ++ LI C+ + A
Sbjct: 74 RPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLA 133
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+ L +M G P+ T SL++ C +A + + M GF+P+V YN I
Sbjct: 134 LALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 193
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + AL +F M ++G+ D V+YN +IS G A + + V++ I P+
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+ ++ALI +G+L EA +L+ EM+R V P+ TY L+ +C+ G A ++ D
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
M +G PD +VT+N LI G C +RV++ + + M GL DA +YNT+
Sbjct: 314 LMVSKGCFPD--------VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-------------------- 383
+ G+CQ +L A ++ M + + D TY L++ L
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 384 --DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG 441
D +TY+ ++ +++ + L R +TR G PD++ I+GL +K A
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 442 ILLRMISSQCLTMPSYIIYDTLIEN 466
+ RM MPS IYD + +
Sbjct: 486 LCRRMKEDG--FMPSERIYDETLRD 508
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 184/377 (48%), Gaps = 24/377 (6%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L P +V+ ++ C+ R +EA +V M+ G P+ YN +I G+CK R++
Sbjct: 143 LGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNN 202
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCT--WWLDKAYKVFNEMIASGFLPSVATYNKFI 161
A+E++ M +G+ + TY +LI L W D A ++ +M+ P+V + I
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA-RLLRDMVKRKIDPNVIFFTALI 261
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
++ + +A ++ M R + P++ +YN++I+ FC G L A + V KG
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
PD VTY+ LI C + + LF EM + TY L++ YC G+ ++A +
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+ M G SP +VT+N L+ LC+ ++++AL ++ + + + D ++YN
Sbjct: 382 FNRMVDCG--------VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYN 433
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM 401
++ G C+ +LK+A+ L + K + D Y +++ GL +G
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC-------------RKGLQ 480
Query: 402 QKVFKLEREMTRNGYLP 418
++ KL R M +G++P
Sbjct: 481 READKLCRRMKEDGFMP 497
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 188/448 (41%), Gaps = 52/448 (11%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
D A+ +F EM+ S +PS+ + + +T + + + ++ M G+S DL S+
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+I FC+ L AL + + ++ G P VT +L+ C EA L M
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P+ Y ++ C + + A + M +G D VT+N LI GL +
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD--------AVTYNTLISGLSN 231
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
R +A +LR M + + P+ + + ++ F + L +A L EM + + + +T
Sbjct: 232 SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFT 291
Query: 375 YESLMEG----------------------LSDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
Y SL+ G D VTY++L+ + ++ KL EMT
Sbjct: 292 YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVE 471
G + D+ T I+G + ++A+ + RM+ C P + Y+ L++ C+ +
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV--DCGVSPDIVTYNILLDCLCNNGK 409
Query: 472 FKSAVGLVKDFST--------------RGL-----VNEAAIAHERMHNMSVKPDGAVYNL 512
+ A+ +V+D +GL + EA + VKPD Y
Sbjct: 410 IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYIT 469
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
+I CR+G +A ++ + M GF P
Sbjct: 470 MISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 5/160 (3%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N +I G+ ++ +K + P +V++ ++ LC ++E+A +V ++
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDC-GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK 137
+ + D TYN +I G+C+ + A L+ + +G+ P+ Y+++I LC L +
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 138 -AYKVFNEMIASGFLPSVATYNKFITAY---LSSERVEQA 173
A K+ M GF+PS Y++ + + LS+E ++ A
Sbjct: 482 EADKLCRRMKEDGFMPSERIYDETLRDHYTSLSAELIKAA 521
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 211/448 (47%), Gaps = 45/448 (10%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERME 67
+V +N ++ GF C ++ E L+ +P V+F ++ L + +
Sbjct: 145 IVTLNSLLNGF-------CHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
EA +V M KG PD TY A+I G+CK A+ L ++M + + Y ++I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 128 DLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
D LC + +D A+ +FN+M G P V TYN I+ + R A + S M E+ ++
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVE-KGILPDDVTYSALIQALCLQGSLPEAFD 245
PDLV +NA+I F ++G+L +A ++ E V+ K PD V Y+ LI+ C + E +
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
+F EM + + + TYT L++ + + A + +M G PD ++T+
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD--------IMTY 429
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
N L+ GLC+ V+ AL + M + + D V+Y T++ C+ +++ ++L +
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 366 KIIWLDEYTYESLMEG----------------------LSDEVTYSSLLNDYFAQGNMQK 403
K + + TY ++M G L + TY++L+ G+
Sbjct: 490 KGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAA 549
Query: 404 VFKLEREMTRNGYLPDSVTLGVFINGLN 431
+L +EM G+ D+ T G+ N L+
Sbjct: 550 SAELIKEMRSCGFAGDASTFGLVTNMLH 577
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 141/572 (24%), Positives = 250/572 (43%), Gaps = 64/572 (11%)
Query: 22 RGFATESVMSCKEK---------KVGETFGLL------RMEPYLVSFKGVIKELCEKERM 66
R FA S C+E K+ + GL R P +V F ++ + + +
Sbjct: 32 RSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKF 91
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
+ + +M G++ + TY+ I C+ + A+ + +M G P+ T SL
Sbjct: 92 DLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSL 151
Query: 127 IDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
++ C + +A + ++M+ G+ P T+ + + +A+ + M +G
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
PDLV+Y AVI+ C+ GE + AL + + + I D V Y+ +I LC + +AFD
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
LF +M + P TY L+ C G +S A L +M + PD LV F
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD--------LVFF 323
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLS-PDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
NALI ++ EA + M + PD V+YNT++ GFC+ + +++ E+ EM
Sbjct: 324 NALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMS 383
Query: 365 EKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQ---GNMQKVFKLEREMTRNGYLPDSV 421
++ + + + VTY++L++ +F N Q VFK +M +G PD +
Sbjct: 384 QRGL-------------VGNTVTYTTLIHGFFQARDCDNAQMVFK---QMVSDGVHPDIM 427
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVK 480
T + ++GL A ++ + + + + + Y T+IE C + + L
Sbjct: 428 TYNILLDGLCNNGNVETAL-VVFEYMQKRDMKL-DIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 481 DFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
S +G VKP+ Y ++ CR+G +A ++ EM G P
Sbjct: 486 SLSLKG----------------VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 541 HMFSVLSLIHALYYDRKNSEMGWVIRNTLRSC 572
+ + +LI A D + +I+ +RSC
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAELIKE-MRSC 560
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 120/274 (43%), Gaps = 40/274 (14%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVV 73
+V N +I F E + EK E P +V++ +IK C+ +R+EE EV
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 74 REMNRKGLA-----------------------------------PDCETYNALICGMCKV 98
REM+++GL PD TYN L+ G+C
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNN 439
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATY 157
N+ A+ +++ M+ R + + TY ++I+ LC ++ + +F + G P+V TY
Sbjct: 440 GNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTY 499
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
++ + E+A +F M E G P+ +YN +I +DG+ + E+ E
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
G D T+ L+ + G L ++ FL+ML
Sbjct: 560 CGFAGDASTF-GLVTNMLHDGRLDKS---FLDML 589
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/531 (24%), Positives = 220/531 (41%), Gaps = 66/531 (12%)
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
+++ EM+ G P T ++ G K + ++ MR P Y +LI
Sbjct: 119 QILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAF 178
Query: 131 CTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
D +F +M G+ P+V + I + RV+ AL + M L D+
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
V YN I F + G+++ A + E G+ PD+VTY+++I LC L EA ++F
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI------------- 296
+ + P Y ++ Y G+F A+ L + R +G +P +
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 297 -------------QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
+P+L T+N LI LC ++D A + M + GL P+ + N +
Sbjct: 359 VDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL--------------------- 382
+ C+ ++L +A + EMD K+ DE T+ SL++GL
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 383 -SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG 441
++ + Y+SL+ ++F G + K+ ++M PD L +++ + K +
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 442 ILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM 501
+ + + + +P Y LI GL+K G NE M
Sbjct: 539 MFEEIKARR--FVPDARSYSILIH-----------GLIK----AGFANETYELFYSMKEQ 581
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
D YN++I C+ G VNKAY++ +EM GF P + + S+I L
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/528 (25%), Positives = 235/528 (44%), Gaps = 42/528 (7%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P L ++ +I LC +++ A E+ M + GL P+ T N ++ +CK + + A +
Sbjct: 375 PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAM 434
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+++M + +P+E T+ SLID L +D AYKV+ +M+ S + Y I + +
Sbjct: 435 FEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFN 494
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
R E I+ M + SPDL N + + GE EK + E + +PD +
Sbjct: 495 HGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS 554
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
YS LI L G E ++LF M Y ++ +C G+ + A+ L +EM+
Sbjct: 555 YSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK 614
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
+G F P++VT+ ++I GL ++R+DEA + + + V Y++++ G
Sbjct: 615 TKG--------FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK 406
F ++ + +AY + E+ +K + + YT+ SL+ D + + +N+ K K
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLL----DALVKAEEINEALVCFQSMKELK 722
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
P+ VT G+ INGL K K + + PS I Y T+I
Sbjct: 723 C---------TPNQVTYGILINGLCK--VRKFNKAFVFWQEMQKQGMKPSTISYTTMIS- 770
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
GL K G + EA +R PD A YN +I A
Sbjct: 771 ----------GLAK----AGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816
Query: 527 YEMYKEMVHYGFFPHMFSVLSLIHALYYD---RKNSEMGWVIRNTLRS 571
+ +++E G H + + L+ L+ + + + +G V+R T ++
Sbjct: 817 FSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKA 864
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 144/620 (23%), Positives = 255/620 (41%), Gaps = 89/620 (14%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L EP + F +I+ ++ R++ A ++ EM L D YN I KV +
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A + + ++ GL P+E TY S+I +LC LD+A ++F + + +P YN I
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
Y S+ + ++A + +G P +++YN +++ + G++++AL++ E ++K P
Sbjct: 317 GYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKV-FEEMKKDAAP 375
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ TY+ LI LC G L AF+L M + + P+ T ++ C + A +
Sbjct: 376 NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMF 435
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEAL-------------------- 322
+EM ++ PD +TF +LI GL + RVD+A
Sbjct: 436 EEMDYKVCTPD--------EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTS 487
Query: 323 ---------------GILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
I + M SPD NT + + E +K + E+ +
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 368 IWLDEYTYESLMEGLS----------------------DEVTYSSLLNDYFAQGNMQKVF 405
D +Y L+ GL D Y+ +++ + G + K +
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 406 KLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
+L EM G+ P VT G I+GL K A +L S+ + + + +IY +LI+
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY-MLFEEAKSKRIEL-NVVIYSSLID 665
Query: 466 NCSYV-EFKSAVGLVKDFSTRGL-------------------VNEAAIAHERMHNMSVKP 505
V A ++++ +GL +NEA + + M + P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 506 DGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVI 565
+ Y +LI C+ NKA+ ++EM G P S ++I L +E G +
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 566 RNTLRSCNLNDSELHQVLNE 585
+ + DS + + E
Sbjct: 786 DRFKANGGVPDSACYNAMIE 805
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 14/291 (4%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R P S+ +I L + E E+ M +G D YN +I G CK + A
Sbjct: 547 RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKA 606
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+L ++M+ +G P TY S+ID L LD+AY +F E + +V Y+ I
Sbjct: 607 YQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDG 666
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ R+++A I + ++GL+P+L ++N+++ + E+ +AL E P+
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
VTY LI LC +AF + EM + + PS +YT ++ G + A L D
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL-----RGMP 329
+ G +PD +NA+I GL + R +A + RG+P
Sbjct: 787 RFKANGGVPD--------SACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP 829
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R+E +V + +I + R++EA ++ E+ +KGL P+ T+N+L+ + K + A
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEA 711
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+ + M+ +PN+ TY LI+ LC +KA+ + EM G PS +Y I+
Sbjct: 712 LVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISG 771
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + +A +F G PD YNA+I A + ET +G+
Sbjct: 772 LAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIH 831
Query: 224 DVTYSALIQALCLQGSLPEA 243
+ T L+ L L +A
Sbjct: 832 NKTCVVLLDTLHKNDCLEQA 851
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 132/554 (23%), Positives = 236/554 (42%), Gaps = 89/554 (16%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++ VI ++ M++A + EM G++ + +LI G CK +++ A+ L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW-----LDKAYKVFNEMIASGFLPSVATYNKFIT 162
+D+M G SPN T+ LI+ W+ ++KA + + +M G PSV + I
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIE----WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 163 AYLSSERVEQALGIF----------------------------------SAMAERGLSPD 188
+L ++ E+AL +F S M RG+ P+
Sbjct: 418 GWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
+VSYN V+ C+ ++ A + + +EKG+ P++ TYS LI A ++
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNAL 308
M ++ + Y ++ C VG+ S A L M + S +++N++
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK-------RLCVSCMSYNSI 590
Query: 309 IHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKII 368
I G +D A+ M G+SP+ ++Y +++ G C+ + +A E++ EM K +
Sbjct: 591 IDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGV 650
Query: 369 WLDEYTYESLMEGL----------------------SDEVTYSSLLNDYFAQGNMQKVFK 406
LD Y +L++G + Y+SL++ + GNM
Sbjct: 651 KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALD 710
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
L ++M ++G D T I+GL K +A + M + + P IIY
Sbjct: 711 LYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV--PDEIIYTV---- 764
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
+V S +G + E M +V P+ +YN +I H R GN+++A
Sbjct: 765 -----------IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 527 YEMYKEMVHYGFFP 540
+ ++ EM+ G P
Sbjct: 814 FRLHDEMLDKGILP 827
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 195/416 (46%), Gaps = 31/416 (7%)
Query: 24 FATESVMS--CKEKKVGETFGLL-RME-----PYLVSFKGVIKELCEKERMEEAKEVVRE 75
F +++S CK+ K E LL +ME P +VS+ V+ C ++ M+ A+ V
Sbjct: 444 FVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSN 503
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWW 134
+ KGL P+ TY+ LI G + + A+E+ + M + N Y ++I+ LC
Sbjct: 504 ILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ 563
Query: 135 LDKAYKVFNEMIASGFL-PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
KA ++ MI L S +YN I + ++ A+ + M G+SP++++Y
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
++++ C++ +++ALE++ E KG+ D Y ALI C + ++ A LF E+L
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
++PS Y L+ + +G A L+ +M G D L T+ LI GL
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD--------LGTYTTLIDGLL 735
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
+ A + M +GL PD + Y ++ G + + K ++ EM + + +
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVL 795
Query: 374 TYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
Y +++ G ++ +GN+ + F+L EM G LPD T + ++G
Sbjct: 796 IYNAVIAG-------------HYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 155/315 (49%), Gaps = 18/315 (5%)
Query: 7 TLKSFRHMVRMNVMIRGFATESVMS--CKEKKVGETFGLL-------RMEPYLVSFKGVI 57
L+ HM N+ + G +++++ CK + + LL R+ +S+ +I
Sbjct: 532 ALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSII 591
Query: 58 KELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLS 117
++ M+ A EM G++P+ TY +L+ G+CK M A+E+ D+M+ +G+
Sbjct: 592 DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVK 651
Query: 118 PNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGI 176
+ Y +LID C ++ A +F+E++ G PS YN I+ + + + AL +
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCL 236
+ M + GL DL +Y +I +DG L A E+ E G++PD++ Y+ ++ L
Sbjct: 712 YKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSK 771
Query: 237 QGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI 296
+G + +F EM + +V+P+ Y ++ + G AF LHDEM +G LPD
Sbjct: 772 KGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDG-- 829
Query: 297 QFSPSLVTFNALIHG 311
TF+ L+ G
Sbjct: 830 ------ATFDILVSG 838
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 208/494 (42%), Gaps = 60/494 (12%)
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+L D + G N R + L++ D A + N+M+ +P N+ ++A
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ + +A ++S M G+ D V+ ++ ++ + +ALE+ + +E+G PD
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVS-PSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+ YS +QA C L A L EM + PS TYT ++ A G A L D
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
EM G S ++V +LI G C + AL + M + G SP++V+++ +
Sbjct: 329 EMLSDG--------ISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Query: 344 LFGFCQIRELKKAYELKVEMD-----------EKII--WLDEYTY--------ESLMEGL 382
+ F + E++KA E +M+ II WL + ES GL
Sbjct: 381 IEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL 440
Query: 383 SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGI 442
++ +++L+ QG + +L +M G P+ V+ + G ++ +A+ I
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLAR-I 499
Query: 443 LLRMISSQCLTMPSYIIYDTLIENC------------------SYVEFKSAVGLVKDFST 484
+ I + L P+ Y LI+ C S +E G+V
Sbjct: 500 VFSNILEKGLK-PNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVN---GVVYQTII 555
Query: 485 RGL--VNEAAIAHERMHNMSVKPDGAV----YNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
GL V + + A E + NM + V YN +I + G ++ A Y+EM G
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGI 615
Query: 539 FPHMFSVLSLIHAL 552
P++ + SL++ L
Sbjct: 616 SPNVITYTSLMNGL 629
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI- 127
A E+ EM GL PD Y ++ G+ K + V+++++M+ ++PN Y ++I
Sbjct: 743 ASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIA 802
Query: 128 DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
LD+A+++ +EM+ G LP AT++ ++ + +
Sbjct: 803 GHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGN 842
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 191/409 (46%), Gaps = 41/409 (10%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
E +L + P L + V+ +C + A + +M + G PD T+ +L+ G C
Sbjct: 107 EQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATY 157
+ A+ L+DQ+ G PN TY +LI LC L+ A ++FN+M +G P+V TY
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
N +T R A + M +R + P+++++ A+I F + G+L +A E+ ++
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSM 277
+ PD TY +LI LC+ G L EA +F M R P+ YT L++ +C
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346
Query: 278 AFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
+ EM +G + + +T+ LI G C + R D A + M PD
Sbjct: 347 GMKIFYEMSQKGVVAN--------TITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 338 VSYNTVLFGFCQIRELKKA-----YELKVEMDEKIIWLDEYTYESLMEGL---------- 382
+YN +L G C +++KA Y K EMD I+ TY +++G+
Sbjct: 399 RTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIV-----TYTIIIQGMCKLGKVEDAF 453
Query: 383 ------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
+ +TY+++++ + +G + + L ++M +G+LP+
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 175/362 (48%), Gaps = 30/362 (8%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L EP LV+F ++ C R+E+A + ++ G P+ TY LI +CK R++
Sbjct: 147 LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNH 206
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTW--WLDKAYKVFNEMIASGFLPSVATYNKFI 161
AVEL++QM G PN TY +L+ LC W D A+ + +M+ P+V T+ I
Sbjct: 207 AVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW-LLRDMMKRRIEPNVITFTALI 265
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
A++ ++ +A +++ M + + PD+ +Y ++I+ C G L++A ++ G
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
P++V Y+ LI C + + +F EM + V + TYT L+ YCLVG +A +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 282 HDEMRHRGFLPDFVI---------------------------QFSPSLVTFNALIHGLCS 314
++M R PD + ++VT+ +I G+C
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
L +V++A + + G+ P+ ++Y T++ GFC+ + +A L +M E +E
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Query: 375 YE 376
Y+
Sbjct: 506 YK 507
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 201/449 (44%), Gaps = 52/449 (11%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+ A +F M+ S LPS+ + + ++ R + + +F M G+ P L + N
Sbjct: 64 FNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
V+ C + +A + ++ G PD VT+++L+ C + +A LF ++L
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P+ TYT L+ C + A L ++M G P++VT+NAL+ GLC
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG--------SRPNVVTYNALVTGLCE 235
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+ R +A +LR M + + P+ +++ ++ F ++ +L +A EL M + ++ D +T
Sbjct: 236 IGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFT 295
Query: 375 YESLMEGL----------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
Y SL+ GL +EV Y++L++ + ++ K+ EM+
Sbjct: 296 YGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMS 355
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVE 471
+ G + +++T V I G +A+ + +M S + P Y+ L++ C +
Sbjct: 356 QKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR--APPDIRTYNVLLDGLCCNGK 413
Query: 472 FKSAVGLVKDFSTR-------------------GLVNEAAIAHERMHNMSVKPDGAVYNL 512
+ A+ + + R G V +A + + +KP+ Y
Sbjct: 414 VEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFPH 541
+I CRRG +++A ++K+M GF P+
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 131/311 (42%), Gaps = 38/311 (12%)
Query: 242 EAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
+A DLF M+ PS +TRL+ + + + L ++M+ ++ P
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ--------ILGIPPL 117
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
L T N ++H +C + A L M ++G PD V++ ++L G+C ++ A +
Sbjct: 118 LCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA----I 173
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
+ ++I+ M + VTY++L+ ++ +L +M NG P+ V
Sbjct: 174 ALFDQILG---------MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVV 224
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKD 481
T + GL + A +L M+ + P+ I + LI+
Sbjct: 225 TYNALVTGLCEIGRWGDAAWLLRDMMKRR--IEPNVITFTALID---------------A 267
Query: 482 FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPH 541
F G + EA + M MSV PD Y LI C G +++A +M+ M G +P+
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 542 MFSVLSLIHAL 552
+LIH
Sbjct: 328 EVIYTTLIHGF 338
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 206/429 (48%), Gaps = 31/429 (7%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R EP + + +I LC++ + A E++REM KG++P+ +Y+ LI +C + A
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
Query: 105 VELYDQMRVRGLSPNERTYMSLID--LLCTWWLDKAYKVFNEMIAS-GFLPSVATYNKFI 161
QM RG PN T SL+ L D A ++N+MI G P+V YN +
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFD-ALDLWNQMIRGFGLQPNVVAYNTLV 359
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
+ S + +A+ +FS M E G SP++ +Y ++I+ F + G L+ A+ I + + G
Sbjct: 360 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 419
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
P+ V Y+ +++ALC EA L M + + +PS T+ + C G A +
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+M + P P++VT+N L+ GL R++EA G+ R + G+ + +YN
Sbjct: 480 FRQMEQQHRCP-------PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGN 400
T+L G C A +L +M +++G S DE+T + ++ Y QG
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKM--------------MVDGKSPDEITMNMIILAYCKQGK 578
Query: 401 MQKVFKLEREMT--RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYI 458
++ ++ ++ R + PD ++ I GL + +L RMIS+ +PS
Sbjct: 579 AERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAG--IVPSIA 636
Query: 459 IYDTLIENC 467
+ LI NC
Sbjct: 637 TWSVLI-NC 644
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 128/511 (25%), Positives = 218/511 (42%), Gaps = 53/511 (10%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
E A E+ + G P + YN ++ + + +Y M+ G PN TY L
Sbjct: 128 ERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVL 187
Query: 127 IDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
+ LC +D A K+ EM G P +Y I++ V++ +AER
Sbjct: 188 LKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----RELAER-F 242
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
P + YNA+I+ C++ + + A E+ E VEKGI P+ ++YS LI LC G + AF
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
+ML+ P+ T + L+ L G A L ++M RGF P++V +
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGF------GLQPNVVAY 355
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
N L+ G CS + +A+ + M E+G SP+ +Y +++ GF + L A
Sbjct: 356 NTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAV-------- 407
Query: 366 KIIWLDEYTYESLMEG-LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
IW + L G + V Y++++ ++ L M++ P T
Sbjct: 408 -YIW-----NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYV-EFKSAVGLVKDFS 483
FI GL A+ + R + Q P+ + Y+ L++ + + A GL ++
Sbjct: 462 AFIKGLCDAGRLDWAEKV-FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 520
Query: 484 TRGL----------------VNEAAIAHERMHNMSV---KPDGAVYNLLIFDHCRRGNVN 524
RG+ IA + + M V PD N++I +C++G
Sbjct: 521 MRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAE 580
Query: 525 KAYEMYKEMVHYG---FFPHMFSVLSLIHAL 552
+A +M ++V G + P + S ++I L
Sbjct: 581 RAAQML-DLVSCGRRKWRPDVISYTNVIWGL 610
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 166/389 (42%), Gaps = 53/389 (13%)
Query: 170 VEQALGIFSAMAERGL---SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
V AL F ++A L +P +++ +I K DG+++ + + +G +
Sbjct: 56 VPLALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL 113
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE--FSMAFHLHDE 284
+ ++I G A ++F + PS Y ++ L+GE M + ++ +
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDT--LLGENRIQMIYMVYRD 171
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M+ GF P++ T+N L+ LC +VD A +L M G PDAVSY TV+
Sbjct: 172 MKRDGF--------EPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
C++ +K+ EL E E ++ Y +L+ GL E +DY +
Sbjct: 224 SSMCEVGLVKEGREL-AERFEPVV----SVYNALINGLCKE-------HDY------KGA 265
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
F+L REM G P+ ++ IN L +A L +M+ C P+ +L+
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC--HPNIYTLSSLV 323
Query: 465 ENCSYVEFKSAVGLVKDFSTRGLVNEAA-IAHERMHNMSVKPDGAVYNLLIFDHCRRGNV 523
+ C RG +A + ++ + ++P+ YN L+ C GN+
Sbjct: 324 KGCFL---------------RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNI 368
Query: 524 NKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
KA ++ M G P++ + SLI+
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 4/228 (1%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V + +++ LC + +EA+ ++ M+++ AP T+NA I G+C + A ++
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 108 YDQMRVRG-LSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+ QM + PN TY L+D L +++AY + E+ G S +TYN +
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK--AETVEKGILPD 223
++ AL + M G SPD ++ N +I +C+ G+ E+A ++ + PD
Sbjct: 540 NAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPD 599
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
++Y+ +I LC + L M+ + PS +T++ L+ + L
Sbjct: 600 VISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFIL 647
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 13/227 (5%)
Query: 32 CKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKG-LAPD 84
C+ K E L+ + P + +F IK LC+ R++ A++V R+M ++ P+
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPN 492
Query: 85 CETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFN 143
TYN L+ G+ K + A L ++ +RG+ + TY +L+ C L A ++
Sbjct: 493 IVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVG 552
Query: 144 EMIASGFLPSVATYNKFITAYLS---SERVEQALGIFSAMAERGLSPDLVSYNAVISKFC 200
+M+ G P T N I AY +ER Q L + S R PD++SY VI C
Sbjct: 553 KMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSC-GRRKWRPDVISYTNVIWGLC 611
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
+ E + + + GI+P T+S LI L + A D F
Sbjct: 612 RSNCREDGVILLERMISAGIVPSIATWSVLINCFILD-DIVRAHDQF 657
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 220/485 (45%), Gaps = 41/485 (8%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
++ V+ M R+G+ E ++ ++ + + A+++ M+ G+ PN + ID
Sbjct: 226 SRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285
Query: 129 LLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
+ L+KA + M G +P+V TYN I Y RVE+A+ + M +G P
Sbjct: 286 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLP 345
Query: 188 DLVSYNAVISKFCQDGELEKALEI-KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
D VSY ++ C++ + + ++ K E G++PD VTY+ LI L EA
Sbjct: 346 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWF 405
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
+ Y+ +++A C G S A L +EM +G P P +VT+
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCP-------PDVVTYT 458
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
A+++G C L VD+A +L+ M G P+ VSY +L G C+ + +A E+ + M E+
Sbjct: 459 AVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM-MNMSEE 517
Query: 367 IIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVF 426
W + +TYS +++ +G + + + REM G+ P V + +
Sbjct: 518 HWW------------SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565
Query: 427 INGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTR 485
+ L + T A+ + ++ C + + + T+I C E +A+ ++ D
Sbjct: 566 LQSLCRDGRTHEARKFMEECLNKGCAI--NVVNFTTVIHGFCQNDELDAALSVLDDMY-- 621
Query: 486 GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSV 545
L+N+ A D Y L+ ++G + +A E+ K+M+H G P +
Sbjct: 622 -LINKHA-------------DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTY 667
Query: 546 LSLIH 550
++IH
Sbjct: 668 RTVIH 672
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 235/511 (45%), Gaps = 40/511 (7%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V++ +I+ C+ R+EEA E++ +M+ KG PD +Y ++ +CK + ++ +L
Sbjct: 310 PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL 369
Query: 108 YDQM-RVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+M + GL P++ TY +LI +L D+A + GF Y+ + A
Sbjct: 370 MKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALC 429
Query: 166 SSERVEQALGIFSAMAERG-LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
R+ +A + + M +G PD+V+Y AV++ FC+ GE++KA ++ G P+
Sbjct: 430 KEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNT 489
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
V+Y+AL+ +C G EA ++ SP++ TY+ +M+ G+ S A + E
Sbjct: 490 VSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVRE 549
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M +GF P V N L+ LC R EA + G + + V++ TV+
Sbjct: 550 MVLKGFF--------PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 601
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
GFCQ EL A + +M L+ +D TY++L++ +G + +
Sbjct: 602 HGFCQNDELDAALSVLDDM-------------YLINKHADVFTYTTLVDTLGKKGRIAEA 648
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQ-CLTMPSYII---- 459
+L ++M G P VT I+ + IL +MIS Q C T+ + +I
Sbjct: 649 TELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLC 708
Query: 460 -------YDTL----IENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGA 508
DTL + S + K+ L++ + +G+ A RM N ++ PD
Sbjct: 709 VLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVK 768
Query: 509 VYNLLIFDHCRRGNVNKAYEMYKEMVHYGFF 539
+ L +G V++A ++ +V G
Sbjct: 769 MCEKLSKRLVLKGKVDEADKLMLRLVERGHI 799
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 153/347 (44%), Gaps = 11/347 (3%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
+ ++ E MS + + E P +V++ V+ C +++AK++++ M+
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 481
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLD 136
G P+ +Y AL+ GMC+ L A E+ + SPN TY ++ L L
Sbjct: 482 THGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLS 541
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A V EM+ GF P N + + R +A +G + ++V++ VI
Sbjct: 542 EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVI 601
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
FCQ+ EL+ AL + + D TY+ L+ L +G + EA +L +ML +
Sbjct: 602 HGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGID 661
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P+ TY +++ YC +G+ + ++M I +N +I LC L
Sbjct: 662 PTPVTYRTVIHRYCQMGKVDDLVAILEKM----------ISRQKCRTIYNQVIEKLCVLG 711
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+++EA +L + DA + ++ G+ + AY++ M
Sbjct: 712 KLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRM 758
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 149/605 (24%), Positives = 256/605 (42%), Gaps = 96/605 (15%)
Query: 33 KEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCE 86
K + + GLL+ ++P + +F I+ L ++ EA E+++ M+ +G PD
Sbjct: 235 KRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVV 294
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC---------TWW--- 134
TY LI +C R + CA E++++M+ P+ TY++L+D +W
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 135 ------------------------LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
+A+ + M G LP++ TYN I L R+
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
+ AL +F M G+ P +Y I + + G+ ALE + KGI P+ V +A
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 474
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
+ +L G EA +F + + P + TY +M Y VGE A L EM G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
PD ++ N+LI+ L +RVDEA + M EM L P V+YNT+L G +
Sbjct: 535 EPDVIV--------VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Query: 351 RELKKAYELKVEMDEKIIWLDEYTYESLMEGL--SDEV--------------------TY 388
++++A EL M +K + T+ +L + L +DEV TY
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 646
Query: 389 SSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMIS 448
++++ G +++ +M + Y PD VTL + G+ K + A I+ +
Sbjct: 647 NTIIFGLVKNGQVKEAMCFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705
Query: 449 SQCLTMPSYIIYDTLIEN----------CSYVEFKSAVGLVKDFST-----------RGL 487
+ C P+ + ++ LI + S+ E A G+ +D +
Sbjct: 706 N-CADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNN 764
Query: 488 VNEAAIAHERM-HNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVL 546
V+ A E+ ++ V+P YNLLI + A +++ ++ G P + +
Sbjct: 765 VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 547 SLIHA 551
L+ A
Sbjct: 825 FLLDA 829
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 222/505 (43%), Gaps = 68/505 (13%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
S+ G+I L + EA EV R M +G P +TY++L+ G+ K R++ + L +M
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
GL PN T+ I +L +++AY++ M G P V TY I A ++ ++
Sbjct: 250 ETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKL 309
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
+ A +F M PD V+Y ++ +F + +L+ + +E + G +PD VT++ L
Sbjct: 310 DCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTIL 369
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
+ ALC G+ EAFD M + P+ TY L+ V A L M G
Sbjct: 370 VDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 291 LPD------FVIQF---------------------SPSLVTFNALIHGLCSLERVDEALG 323
P F+ + +P++V NA ++ L R EA
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 324 ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL- 382
I G+ ++GL PD+V+YN ++ + ++ E+ +A +L EM E D SL+ L
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 383 ----SDE-----------------VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
DE VTY++LL G +Q+ +L M + G P+++
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKD 481
T + L K ++A +L +M+ C+ P Y+T+I GLVK+
Sbjct: 610 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCV--PDVFTYNTII-----------FGLVKN 656
Query: 482 FSTRGLVNEAAIAHERMHNMSVKPD 506
G V EA +M + V PD
Sbjct: 657 ----GQVKEAMCFFHQMKKL-VYPD 676
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 220/520 (42%), Gaps = 48/520 (9%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
+ K L K +++A +R+M G + +YN LI + K R A+E+Y +M + G
Sbjct: 159 IFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG 218
Query: 116 LSPNERTYMSL-IDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
P+ +TY SL + L +D + EM G P+V T+ I + ++ +A
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
I M + G PD+V+Y +I C +L+ A E+ + PD VTY L+
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 235 CLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDF 294
L + EM + P T+T L+ A C G F AF D MR +G LP+
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN- 397
Query: 295 VIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELK 354
L T+N LI GL + R+D+AL + M +G+ P A +Y + + + +
Sbjct: 398 -------LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 355 KAYELKVEMDEK-----IIWLDEYTYESLMEG-----------------LSDEVTYSSLL 392
A E +M K I+ + Y G + D VTY+ ++
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
Y G + + KL EM NG PD + + IN L K A + +RM +
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM--KEMK 568
Query: 453 TMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNL 512
P+ + Y+TL+ GL K+ G + EA E M P+ +N
Sbjct: 569 LKPTVVTYNTLL-----------AGLGKN----GKIQEAIELFEGMVQKGCPPNTITFNT 613
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
L C+ V A +M +M+ G P +F+ ++I L
Sbjct: 614 LFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGL 653
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 131/551 (23%), Positives = 239/551 (43%), Gaps = 70/551 (12%)
Query: 39 ETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGM 95
ETF ++ + P +V+ + L + R EAK++ + GL PD TYN ++
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 96 CKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSV 154
KV + A++L +M G P+ SLI+ L +D+A+K+F M P+V
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 155 ATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
TYN + + ++++A+ +F M ++G P+ +++N + C++ E+ AL++ +
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY------- 267
++ G +PD TY+ +I L G + EA F +M + V P T L+
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASL 692
Query: 268 ---AYCLVGEFSMAFHLHDEMRHRGFLPDFV------------IQFSPSLVT-------- 304
AY ++ F ++ D+ + F D + + FS LV
Sbjct: 693 IEDAYKIITNF--LYNCADQPANL-FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGD 749
Query: 305 --FNALIHGLCSLERVDEALGIL-RGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
+I C V A + + ++G+ P +YN ++ G L+
Sbjct: 750 SILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGL-----------LEA 798
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
+M E I D + + D TY+ LL+ Y G + ++F+L +EM+ + +++
Sbjct: 799 DMIE--IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKD 481
T + I+GL K A + ++S + + P+ Y LI+
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFS-PTACTYGPLIDG--------------- 900
Query: 482 FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPH 541
S G + EA E M + +P+ A+YN+LI + G + A ++K MV G P
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 542 MFSVLSLIHAL 552
+ + L+ L
Sbjct: 961 LKTYSVLVDCL 971
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 125/511 (24%), Positives = 223/511 (43%), Gaps = 44/511 (8%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP ++ +I L + +R++EA ++ M L P TYN L+ G+ K + A+E
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
L++ M +G PN T+ +L D LC + A K+ +M+ G +P V TYN I +
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEK-GILPDD 224
+ +V++A+ F M ++ + PD V+ ++ + +E A +I + P +
Sbjct: 655 KNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPAN 713
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEML--RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ + LI ++ + + A F E L G +S ++ C S A L
Sbjct: 714 LFWEDLIGSILAEAGIDNAVS-FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLF 772
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
++ F D +Q P L T+N LI GL + ++ A + + G PD +YN
Sbjct: 773 EK-----FTKDLGVQ--PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNF 825
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
+L + + ++ + +EL EM S E ++ +T++ +++ GN+
Sbjct: 826 LLDAYGKSGKIDELFELYKEM-------------STHECEANTITHNIVISGLVKAGNVD 872
Query: 403 KVFKLERE-MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
L + M+ + P + T G I+GL+K AK + M+ C P+ IY+
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC--RPNCAIYN 930
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
LI F G + A +RM V+PD Y++L+ C G
Sbjct: 931 ILING---------------FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVG 975
Query: 522 NVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
V++ +KE+ G P + +I+ L
Sbjct: 976 RVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 159/358 (44%), Gaps = 18/358 (5%)
Query: 31 SCKEKKVGETFGL-------LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAP 83
SCK V L L ++P L ++ +I L E + +E A++V ++ G P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 84 DCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVF 142
D TYN L+ K + ELY +M N T+ +I L+ +D A ++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 143 NEMIAS-GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
++++ F P+ TY I S R+ +A +F M + G P+ YN +I+ F +
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 202 DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
GE + A + V++G+ PD TYS L+ LC+ G + E F E+ ++P
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMR-HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
Y ++ A L +EM+ RG PD L T+N+LI L V+E
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGITPD--------LYTYNSLILNLGIAGMVEE 1050
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
A I + GL P+ ++N ++ G+ + + AY + M + TYE L
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 216/535 (40%), Gaps = 80/535 (14%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++F + LC+ + + A +++ +M G PD TYN +I G+ K + A+
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCF 665
Query: 108 YDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVF-NEMIASGFLPSVATYNKFITAYL 165
+ QM+ + + P+ T +L+ ++ ++ AYK+ N + P+ + I + L
Sbjct: 666 FHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSIL 724
Query: 166 SSERVEQALGIFSAMAERGL-------------------------------------SPD 188
+ ++ A+ + G+ P
Sbjct: 725 AEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPK 784
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
L +YN +I + +E A ++ + G +PD TY+ L+ A G + E F+L+
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH-DEMRHRGFLPDFVIQFSPSLVTFNA 307
EM + + T+ ++ G A L+ D M R FSP+ T+
Sbjct: 845 EMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDR--------DFSPTACTYGP 896
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
LI GL R+ EA + GM + G P+ YN ++ GF + E A L M
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM---- 952
Query: 368 IWLDEYTYESLMEGLSDEV-TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVF 426
+ EG+ ++ TYS L++ G + + +E+ +G PD V +
Sbjct: 953 ----------VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 427 INGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRG 486
INGL K A + M +S+ +T P Y++LI N G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGIT-PDLYTYNSLILN---------------LGIAG 1046
Query: 487 LVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPH 541
+V EA + + ++P+ +N LI + G AY +Y+ MV GF P+
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/431 (20%), Positives = 179/431 (41%), Gaps = 66/431 (15%)
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
T + +++AL + G L E +F M + + +TY + + + G A + +M
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 286 RHRGFLPD---------------------------FVIQFSPSLVTFNALIHGLCSLERV 318
R GF+ + + F PSL T+++L+ GL +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
D +G+L+ M +GL P+ ++ + + ++ +AYE+ MD++ D TY L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 379 MEGL----------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
++ L D VTY +LL+ + ++ V + EM ++G+
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAV 476
+PD VT + ++ L K A L M L P+ Y+TLI
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL--PNLHTYNTLI-----------C 406
Query: 477 GLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHY 536
GL++ +++A M ++ VKP Y + I + + G+ A E +++M
Sbjct: 407 GLLRVHR----LDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Query: 537 GFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVLNEIEVKKCKIDAL 596
G P++ + + +++L ++ E + + DS + ++ + K +ID
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 597 LNALAKIAVDG 607
+ L+++ +G
Sbjct: 523 IKLLSEMMENG 533
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 197/399 (49%), Gaps = 36/399 (9%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L EP +V+F +I C RMEEA +V +M G+ PD Y +I +CK ++
Sbjct: 136 LGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNY 195
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCT--WWLDKAYKVFNEMIASGFLPSVATYNKFI 161
A+ L+DQM G+ P+ Y SL++ LC W D A + M P V T+N I
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD-ADSLLRGMTKRKIKPDVITFNALI 254
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
A++ + A +++ M ++P++ +Y ++I+ FC +G +++A ++ KG
Sbjct: 255 DAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCF 314
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
PD V Y++LI C + +A +F EM + ++ + TYT L+ + VG+ ++A +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM---GLSPDAV 338
M RG P++ T+N L+H LC +V +AL I M + G++P+
Sbjct: 375 FSHMVSRG--------VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Query: 339 SYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL---------------- 382
+YN +L G C +L+KA + +M ++ + + TY +++G+
Sbjct: 427 TYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSL 486
Query: 383 ------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
+ VTY+++++ F +G + L R+M +G
Sbjct: 487 PSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 220/498 (44%), Gaps = 44/498 (8%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R P ++ F ++ + + ++ + + + G++ D T N L+ C+ A
Sbjct: 67 RPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLA 126
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+M G P+ T+ SLI+ C +++A + N+M+ G P V Y I +
Sbjct: 127 SSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDS 186
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ V AL +F M G+ PD+V Y ++++ C G A + ++ I PD
Sbjct: 187 LCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+T++ALI A +G +A +L+ EM+R ++P+ TYT L+ +C+ G A +
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
M +G PD +V + +LI+G C ++VD+A+ I M + GL+ + ++Y T+
Sbjct: 307 LMETKGCFPD--------VVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV-TYSSLLNDYFAQGNMQ 402
+ GF Q+ + A E+ M + G+ + TY+ LL+ G ++
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSR--------------GVPPNIRTYNVLLHCLCYNGKVK 404
Query: 403 KVFKLEREMTR---NGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
K + +M + +G P+ T V ++GL A + M + + +
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE-MDIGIITY 463
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
+ C + K+AV L ++G VKP+ Y +I R
Sbjct: 464 TIIIQGMCKAGKVKNAVNLFCSLPSKG----------------VKPNVVTYTTMISGLFR 507
Query: 520 RGNVNKAYEMYKEMVHYG 537
G ++A+ ++++M G
Sbjct: 508 EGLKHEAHVLFRKMKEDG 525
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/474 (25%), Positives = 208/474 (43%), Gaps = 62/474 (13%)
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWL-------------------DKAYKVFNEMI 146
+L+ V+G S ++ L+DL ++W+ ++A +F M+
Sbjct: 7 QLHRNRLVKGNSGKALSFSRLLDL--SFWVRAFCNYREILRNGLHSLQFNEALDLFTHMV 64
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE 206
S LPS+ + K + ++ + + + + G+S DL + N +++ FCQ +
Sbjct: 65 ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPY 124
Query: 207 KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLM 266
A + ++ G PD VT+++LI CL + EA + +M+ + P YT ++
Sbjct: 125 LASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTII 184
Query: 267 YAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILR 326
+ C G + A L D+M + G PD V+ + +L++GLC+ R +A +LR
Sbjct: 185 DSLCKNGHVNYALSLFDQMENYGIRPDVVM--------YTSLVNGLCNSGRWRDADSLLR 236
Query: 327 GMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV 386
GM + + PD +++N ++ F + + A EL EM I + +
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF------------- 283
Query: 387 TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
TY+SL+N + +G + + ++ M G PD V ING K A I M
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 447 ISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
S + LT + I Y TLI+ F G N A M + V P+
Sbjct: 344 -SQKGLT-GNTITYTTLIQG---------------FGQVGKPNVAQEVFSHMVSRGVPPN 386
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHY---GFFPHMFSVLSLIHALYYDRK 557
YN+L+ C G V KA ++++M G P++++ L+H L Y+ K
Sbjct: 387 IRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 159/327 (48%), Gaps = 34/327 (10%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
E +G+ P +V + ++ LC R +A ++R M ++ + PD T+NALI K
Sbjct: 204 ENYGI---RPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATY 157
L A ELY++M ++PN TY SLI+ C +D+A ++F M G P V Y
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
I + ++V+ A+ IF M+++GL+ + ++Y +I F Q G+ A E+ + V
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD---VSPSNSTYTRLMYAYCLVGE 274
+G+ P+ TY+ L+ LC G + +A +F +M + + V+P+ TY L++ C G+
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 275 FSMAFHLHDEMRHR-------------------GFLPDFVIQF--------SPSLVTFNA 307
A + ++MR R G + + V F P++VT+
Sbjct: 441 LEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTT 500
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLS 334
+I GL EA + R M E G+S
Sbjct: 501 MISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 134/258 (51%), Gaps = 12/258 (4%)
Query: 11 FRHMVRMNVMIRGFATESVMS--CKEKKVGET---FGLLRME---PYLVSFKGVIKELCE 62
+ M+RM++ F S+++ C E V E F L+ + P +V++ +I C+
Sbjct: 270 YNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCK 329
Query: 63 KERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERT 122
+++++A ++ EM++KGL + TY LI G +V A E++ M RG+ PN RT
Sbjct: 330 CKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRT 389
Query: 123 YMSLIDLLC-TWWLDKAYKVFNEMIA---SGFLPSVATYNKFITAYLSSERVEQALGIFS 178
Y L+ LC + KA +F +M G P++ TYN + + ++E+AL +F
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
M +R + +++Y +I C+ G+++ A+ + KG+ P+ VTY+ +I L +G
Sbjct: 450 DMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Query: 239 SLPEAFDLFLEMLRGDVS 256
EA LF +M VS
Sbjct: 510 LKHEAHVLFRKMKEDGVS 527
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 185/368 (50%), Gaps = 28/368 (7%)
Query: 18 NVMIRGFATESVMS-------CKEKKVGE------TFGLLRMEPYLVSFKGVIKELCEKE 64
NV+ RG T+++ CK +KV E + R +P + +++ + +
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
++EA V M RKG+ P E YN LI G K R++ +L ++R RGL+P TY
Sbjct: 556 NLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYG 615
Query: 125 SLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
+LI C +DKAY EMI G +V +K + +++++A + + +
Sbjct: 616 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDF 675
Query: 184 GL----SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS 239
L L + + C + + A ++ T +K ++P+++ Y+ I LC G
Sbjct: 676 DLLLPGYQSLKEFLEASATTCLKTQ-KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGK 734
Query: 240 LPEAFDLFLEMLRGD-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
L +A LF ++L D P TYT L++ + G+ + AF L DEM +G +P+
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPN----- 789
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
+VT+NALI GLC L VD A +L +P+ G++P+A++YNT++ G + + +A
Sbjct: 790 ---IVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMR 846
Query: 359 LKVEMDEK 366
LK +M EK
Sbjct: 847 LKEKMIEK 854
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/544 (25%), Positives = 244/544 (44%), Gaps = 60/544 (11%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
ET L +E +V++ +I +E V+R M+ +G++ + TY +LI G CK
Sbjct: 250 ETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKK 309
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATY 157
M A +++ ++ + L ++ Y L+D C T + A +V + MI G +
Sbjct: 310 GLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTIC 369
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
N I Y S ++ +A IFS M + L PD +YN ++ +C+ G +++AL++ + +
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSM 277
K ++P +TY+ L++ G+ + L+ ML+ V+ + + L+ A +G+F+
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNE 489
Query: 278 AFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
A L + + RG L D +T N +I GLC +E+V+EA IL + P
Sbjct: 490 AMKLWENVLARGLLTD--------TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV 541
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFA 397
+Y + G+ ++ LK+A+ +K M+ K I+ Y +L+ G F
Sbjct: 542 QTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGA-------------FK 588
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVTLGVFING------LNKKATTS---IAKGILLRM-- 446
++ KV L E+ G P T G I G ++K T I KGI L +
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNI 648
Query: 447 -------------ISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAA 492
I CL + + +D L+ S EF A S +
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA-------SATTCLKTQK 701
Query: 493 IAHERMHNMSVK----PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYG-FFPHMFSVLS 547
IA E + N + K P+ VYN+ I C+ G + A +++ +++ F P ++
Sbjct: 702 IA-ESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTI 760
Query: 548 LIHA 551
LIH
Sbjct: 761 LIHG 764
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 136/571 (23%), Positives = 248/571 (43%), Gaps = 59/571 (10%)
Query: 12 RHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFK---GVIKE-LCEKERME 67
R++V +I+G+ + +M E F LL+ E LV+ + GV+ + C ++
Sbjct: 294 RNVVTYTSLIKGYCKKGLMEEAE----HVFELLK-EKKLVADQHMYGVLMDGYCRTGQIR 348
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
+A V M G+ + N+LI G CK ++ A +++ +M L P+ TY +L+
Sbjct: 349 DAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 128 DLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
D C ++D+A K+ ++M +P+V TYN + Y L ++ M +RG++
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
D +S + ++ + G+ +A+++ + +G+L D +T + +I LC + EA ++
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
+ P+ TY L + Y VG AF + + M +G P ++ +N
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP--------TIEMYN 580
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
LI G +++ ++ + GL+P +Y ++ G+C I + KAY EM EK
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK 640
Query: 367 IIWLDEYTYESLMEGL-----SDE--------VTYSSLLNDY-----FAQGNMQKVFK-- 406
I L+ + L DE V + LL Y F + + K
Sbjct: 641 GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQ 700
Query: 407 -----LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
+E + +P+++ V I GL K A+ + ++SS +P Y
Sbjct: 701 KIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRF-IPDEYTYT 759
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
LI C+ G +N+A + M + P+ YN LI C+ G
Sbjct: 760 ILIHGCAIA---------------GDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLG 804
Query: 522 NVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
NV++A + ++ G P+ + +LI L
Sbjct: 805 NVDRAQRLLHKLPQKGITPNAITYNTLIDGL 835
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 215/500 (43%), Gaps = 42/500 (8%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F ++K EK ++ A V M G P + N+L+ + + A+ +YDQM
Sbjct: 158 FDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMI 217
Query: 113 VRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIAS-GFLPSVATYNKFITAYLSSERV 170
+SP+ T +++ C + +DKA E +S G +V TYN I Y V
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
E + M+ERG+S ++V+Y ++I +C+ G +E+A + EK ++ D Y L
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
+ C G + +A + M+ V + + L+ YC G+ A + M
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
PD T+N L+ G C VDEAL + M + + P ++YN +L G+ +I
Sbjct: 398 KPDH--------HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRI 449
Query: 351 RELKKAYELKVEMDEKIIWLDEYTYESLMEGL-SDEVTYSSLLNDYFAQGNMQKVFKLER 409
L M L G+ +DE++ S+LL F G+ + KL
Sbjct: 450 GAFHDVLSLWKMM--------------LKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 410 EMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSY 469
+ G L D++TL V I+GL K + AK IL + +C P+ Y L S+
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRC--KPAVQTYQAL----SH 549
Query: 470 VEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEM 529
+K G + EA E M + P +YN LI + ++NK ++
Sbjct: 550 GYYKV-----------GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADL 598
Query: 530 YKEMVHYGFFPHMFSVLSLI 549
E+ G P + + +LI
Sbjct: 599 VIELRARGLTPTVATYGALI 618
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 178/437 (40%), Gaps = 73/437 (16%)
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
EA ++ + +GL D T N +I G+CK+ + A E+ D + + P +TY +L
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALS 548
Query: 128 -DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
L +A+ V M G P++ YN I+ + + + + RGL+
Sbjct: 549 HGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLT 608
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA--- 243
P + +Y A+I+ +C G ++KA E +EKGI + S + +L + EA
Sbjct: 609 PTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLL 668
Query: 244 ------FDLFL-------EMLRGDVS----------------------PSNSTYTRLMYA 268
FDL L E L + P+N Y +
Sbjct: 669 LQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAG 728
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
C G+ A L ++ +F P T+ LIHG +++A + M
Sbjct: 729 LCKAGKLEDARKLFSDLLSSD-------RFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTY 388
G+ P+ V+YN ++ G C++ + +A L ++ +K I + TY +L++GL
Sbjct: 782 ALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGL------ 835
Query: 389 SSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILL---- 444
GN+ + +L+ +M G + G +K+ I K ++L
Sbjct: 836 -------VKSGNVAEAMRLKEKMIEKG----------LVRGSDKQGDVDIPKEVVLDPEV 878
Query: 445 RMISSQCLTMPSYIIYD 461
++ S+ + M S +YD
Sbjct: 879 KLGSTGVIEMNSNELYD 895
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 115/284 (40%), Gaps = 40/284 (14%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + + +I + + + ++V E+ +GL P TY ALI G C + + A
Sbjct: 574 PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYAT 633
Query: 108 YDQMRVRGLSPNERT---------------------------------YMSLIDLL---- 130
+M +G++ N Y SL + L
Sbjct: 634 CFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASA 693
Query: 131 --CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM-AERGLSP 187
C A V N +P+ YN I + ++E A +FS + + P
Sbjct: 694 TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIP 753
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D +Y +I G++ KA ++ E KGI+P+ VTY+ALI+ LC G++ A L
Sbjct: 754 DEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLL 813
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
++ + ++P+ TY L+ G + A L ++M +G +
Sbjct: 814 HKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 150/380 (39%), Gaps = 72/380 (18%)
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLR--GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
T S L + + L S F ++ E++R + S S + + ++ Y G A H+ D
Sbjct: 123 TKSYLCELVALNHS---GFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFD 179
Query: 284 EMRHRGFLP-------------------------DFVIQF--SPSLVTFNALIHGLCSLE 316
M + G +P D +I F SP + T + +++ C
Sbjct: 180 NMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSG 239
Query: 317 RVDEALGILRGM-PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
VD+A+ + +GL + V+YN+++ G+ I +++ + M E+ + + TY
Sbjct: 240 NVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTY 299
Query: 376 ESLMEG----------------------LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
SL++G ++D+ Y L++ Y G ++ ++ M
Sbjct: 300 TSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE 359
Query: 414 NGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFK 473
G ++ ING K A+ I RM + P + Y+TL++
Sbjct: 360 IGVRTNTTICNSLINGYCKSGQLVEAEQIFSRM--NDWSLKPDHHTYNTLVDG------- 410
Query: 474 SAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
+ G V+EA ++M V P YN+L+ + R G + ++K M
Sbjct: 411 --------YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 534 VHYGFFPHMFSVLSLIHALY 553
+ G S +L+ AL+
Sbjct: 463 LKRGVNADEISCSTLLEALF 482
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 140/551 (25%), Positives = 239/551 (43%), Gaps = 71/551 (12%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C+++K+ + LR + P +VSF ++ C+ ++ AK + + GL P
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 257
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY------MSLIDLLCTWW----- 134
++N LI G+C V ++ A+EL M G+ P+ TY L+ ++ W
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 317
Query: 135 -------------------------LDKAYKVFNEMIASGF-LPSVATYNKFITAYLSSE 168
+D + +M++ GF L S+ + ++ +
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
R+++AL +F+ M GLSPDLV+Y+ VI C+ G+ + AL + E +K ILP+ T+
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
AL+ LC +G L EA L ++ + Y ++ Y G A L +
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
G +PS+ TFN+LI+G C + + EA IL + GL+P VSY T++ +
Sbjct: 498 G--------ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLE 408
K EL+ EM + I TY + +GL + + N + +K +
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN-CNHVLRERIFEKCKQGL 608
Query: 409 REMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-C 467
R+M G PD +T I L + S A + L ++ S+ L S Y+ LI++ C
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGA-FVFLEIMKSRNLDASS-ATYNILIDSLC 666
Query: 468 SYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAY 527
Y G + +A + +V Y LI HC +G+ A
Sbjct: 667 VY----------------GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 528 EMYKEMVHYGF 538
+++ +++H GF
Sbjct: 711 KLFHQLLHRGF 721
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 202/428 (47%), Gaps = 42/428 (9%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
++++ ++++M + L ++YN+++ + M ++Y +++ NE TY +
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMW---DVYKEIK----DKNEHTYST 192
Query: 126 LIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
++D LC L+ A PSV ++N ++ Y V+ A F + + G
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
L P + S+N +I+ C G + +ALE+ ++ + G+ PD VTY+ L + L G + A+
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
++ +ML +SP TYT L+ C +G M L +M RGF + S++
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN-------SIIP 365
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+ ++ GLC R+DEAL + M GLSPD V+Y+ V+ G C++ + A L EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 365 EKIIWLDEYTYESLMEGLS----------------------DEVTYSSLLNDYFAQGNMQ 402
+K I + T+ +L+ GL D V Y+ +++ Y G ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
+ +L + + G P T I G K + A+ I L +I L PS + Y T
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI-LDVIKLYGLA-PSVVSYTT 543
Query: 463 LIE---NC 467
L++ NC
Sbjct: 544 LMDAYANC 551
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 189/418 (45%), Gaps = 45/418 (10%)
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
DK + V+ E+ + TY+ + +++E A+ + + P +VS+N++
Sbjct: 173 DKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSI 228
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
+S +C+ G ++ A ++ G++P +++ LI LCL GS+ EA +L +M + V
Sbjct: 229 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 288
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
P + TY L + L+G S A+ + +M +G SP ++T+ L+ G C L
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL--------SPDVITYTILLCGQCQL 340
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLF-GFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+D L +L+ M G +++ +V+ G C+ + +A L +M
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA--------- 391
Query: 375 YESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
+GLS D V YS +++ G L EM LP+S T G + GL +K
Sbjct: 392 -----DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 434 ATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAI 493
A+ +L +ISS ++Y+ +I+ ++ G + EA
Sbjct: 447 GMLLEARSLLDSLISSG--ETLDIVLYNIVIDG---------------YAKSGCIEEALE 489
Query: 494 AHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
+ + + P A +N LI+ +C+ N+ +A ++ + YG P + S +L+ A
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 28/289 (9%)
Query: 38 GETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCK 97
GET ++ Y + G K C +EEA E+ + + G+ P T+N+LI G CK
Sbjct: 463 GETLDIVL---YNIVIDGYAKSGC----IEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 98 VRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAY-KVFNEMIASGFLPSVAT 156
+N+ A ++ D +++ GL+P+ +Y +L+D K+ ++ EM A G P+ T
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 575
Query: 157 YNKFITA-----------YLSSERV-EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
Y+ ++ ER+ E+ M G+ PD ++YN +I C+
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 635
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L A + + TY+ LI +LC+ G + +A + +VS S YT
Sbjct: 636 LSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 695
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
L+ A+C+ G+ MA L ++ HRG F+ S+ ++A+I+ LC
Sbjct: 696 LIKAHCVKGDPEMAVKLFHQLLHRG--------FNVSIRDYSAVINRLC 736
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 228/521 (43%), Gaps = 46/521 (8%)
Query: 35 KKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICG 94
K++ E FG EP + S+ ++ E ++ + + + G+AP+ +TYN LI
Sbjct: 102 KRMREIFGC---EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKM 158
Query: 95 MCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPS 153
CK + A D M G P+ +Y ++I DL LD A ++F+EM G P
Sbjct: 159 SCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPD 218
Query: 154 VATYNKFITAYLSSERVEQALGIFSAMAE-RGLSPDLVSYNAVISKFCQDGELEKALEIK 212
V YN I +L + + A+ ++ + E + P++ ++N +IS + G ++ L+I
Sbjct: 219 VTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW 278
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
+ D TYS+LI LC G++ +A +F E+ S TY ++ +C
Sbjct: 279 ERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRC 338
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
G+ + L M H+ S ++V++N LI GL ++DEA I R MP G
Sbjct: 339 GKIKESLELWRIMEHKN---------SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Query: 333 LSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL 392
+ D +Y + G C + KA + E++ LD Y Y S+++ L
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC--------- 440
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
+ +++ L +EM+++G +S I GL + + A L M + C
Sbjct: 441 ----KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGC- 495
Query: 453 TMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
P+ + Y+ LI C +F A VK+ G KPD Y+
Sbjct: 496 -RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGW----------------KPDLKTYS 538
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
+L+ CR ++ A E++ + + G + LIH L
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGL 579
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 128/479 (26%), Positives = 211/479 (44%), Gaps = 51/479 (10%)
Query: 104 AVELYDQMR-VRGLSPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLPSVATYNKF 160
A++++ +MR + G P R+Y +L++ W+ K +F +G P++ TYN
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWV-KVESLFAYFETAGVAPNLQTYNVL 155
Query: 161 ITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI 220
I + E+A G M + G PD+ SY+ VI+ + G+L+ ALE+ E E+G+
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 221 LPDDVTYSALIQALCLQGSLPEAFDLFLEMLR-GDVSPSNSTYTRLMYAYCLVGEFSMAF 279
PD Y+ LI + A +L+ +L V P+ T+ ++ G
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
+ + M+ + L T+++LIHGLC VD+A + + E S D V+
Sbjct: 276 KIWERMKQN--------EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVT 327
Query: 340 YNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQG 399
YNT+L GFC+ ++K++ EL M+ K + V+Y+ L+ G
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEHK--------------NSVNIVSYNILIKGLLENG 373
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC-LTMPSYI 458
+ + + R M GY D T G+FI+GL + A G++ + SS L + +Y
Sbjct: 374 KIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYA 433
Query: 459 -IYDTLIENCSYVEFKSAVGLVKDFSTRGL-------------------VNEAAIAHERM 498
I D L C + A LVK+ S G+ + EA+ M
Sbjct: 434 SIIDCL---CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREM 490
Query: 499 HNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
+P YN+LI C+ G +A KEM+ G+ P + + L+ L DRK
Sbjct: 491 GKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 133/561 (23%), Positives = 248/561 (44%), Gaps = 64/561 (11%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
ET G+ P L ++ +IK C+K+ E+A+ + M ++G PD +Y+ +I + K
Sbjct: 141 ETAGV---APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKA 197
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMI-----ASGFLPS 153
+ A+EL+D+M RG++P+ Y LID +K +K E+ S P+
Sbjct: 198 GKLDDALELFDEMSERGVAPDVTCYNILIDGFLK---EKDHKTAMELWDRLLEDSSVYPN 254
Query: 154 VATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKA 213
V T+N I+ RV+ L I+ M + DL +Y+++I C G ++KA +
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
E E+ D VTY+ ++ C G + E+ +L+ ++ S + +Y L+ G
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENG 373
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
+ A + M +G+ D T+ IHGLC V++ALG+++ + G
Sbjct: 374 KIDEATMIWRLMPAKGYAAD--------KTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE-------- 385
D +Y +++ C+ + L++A L EM + + L+ + +L+ GL +
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 386 --------------VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
V+Y+ L+ G + +EM NG+ PD T + + GL
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTR----- 485
+ +A + + + S T ++++ LI CS + A+ ++ + R
Sbjct: 546 RDRKIDLALELWHQFLQSGLET--DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTAN 603
Query: 486 --------------GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYK 531
G N A + M+ M ++PD YN ++ C V+ A E +
Sbjct: 604 LVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Query: 532 EMVHYGFFPHMFSVLSLIHAL 552
+ ++G FP +++ L+ A+
Sbjct: 664 DARNHGIFPTVYTWNILVRAV 684
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 156/372 (41%), Gaps = 56/372 (15%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPY-----LVSFKGVIKELCEKERMEE 68
+V N M+ GF C+ K+ E+ L R+ + +VS+ +IK L E +++E
Sbjct: 325 VVTYNTMLGGF-------CRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDE 377
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A + R M KG A D TY I G+C + A+ + ++ G + Y S+ID
Sbjct: 378 ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
Query: 129 LLCT------------------------------------WWLDKAYKVFNEMIASGFLP 152
LC L +A EM +G P
Sbjct: 438 CLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
+V +YN I + + +A M E G PDL +Y+ ++ C+D +++ ALE+
Sbjct: 498 TVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELW 557
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
+ ++ G+ D + ++ LI LC G L +A + M + + + TY LM + V
Sbjct: 558 HQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKV 617
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
G+ + A + M G PD ++++N ++ GLC V A+ G
Sbjct: 618 GDSNRATVIWGYMYKMGLQPD--------IISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669
Query: 333 LSPDAVSYNTVL 344
+ P ++N ++
Sbjct: 670 IFPTVYTWNILV 681
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 7/244 (2%)
Query: 32 CKEKKVGETFGLLR-MEPYLVSFK-----GVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK+K++ E L++ M + V +I L R+ EA +REM + G P
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNE 144
+YN LICG+CK A +M G P+ +TY L+ LC +D A +++++
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
+ SG V +N I S +++ A+ + + M R + +LV+YN ++ F + G+
Sbjct: 560 FLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGD 619
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+A I + G+ PD ++Y+ +++ LC+ + A + F + + P+ T+
Sbjct: 620 SNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNI 679
Query: 265 LMYA 268
L+ A
Sbjct: 680 LVRA 683
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 142/551 (25%), Positives = 240/551 (43%), Gaps = 71/551 (12%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C+++K+ + LR + P +VSF ++ C+ ++ AK + + GL P
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 257
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY------MSLIDLLCTWW----- 134
++N LI G+C V ++ A+EL M G+ P+ TY L+ ++ W
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 317
Query: 135 -LDKAYK------------------------VFNEMIASGF-LPSVATYNKFITAYLSSE 168
LDK + +M++ GF L S+ + ++ +
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
R+++AL +F+ M GLSPDLV+Y+ VI C+ G+ + AL + E +K ILP+ T+
Sbjct: 378 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 437
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
AL+ LC +G L EA L ++ + Y ++ Y G A L +
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 497
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
G +PS+ TFN+LI+G C + + EA IL + GL+P VSY T++ +
Sbjct: 498 G--------ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYA 549
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLE 408
K EL+ EM + I TY + +GL + + N + +K +
Sbjct: 550 NCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN-CNHVLRERIFEKCKQGL 608
Query: 409 REMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-C 467
R+M G PD +T I L + S A + L ++ S+ L S Y+ LI++ C
Sbjct: 609 RDMESEGIPPDQITYNTIIQYLCRVKHLSGA-FVFLEIMKSRNLDASS-ATYNILIDSLC 666
Query: 468 SYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAY 527
Y G + +A + +V Y LI HC +G+ A
Sbjct: 667 VY----------------GYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAV 710
Query: 528 EMYKEMVHYGF 538
+++ +++H GF
Sbjct: 711 KLFHQLLHRGF 721
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 202/428 (47%), Gaps = 42/428 (9%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
++++ ++++M + L ++YN+++ + M ++Y +++ NE TY +
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMW---DVYKEIK----DKNEHTYST 192
Query: 126 LIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
++D LC L+ A PSV ++N ++ Y V+ A F + + G
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCG 252
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
L P + S+N +I+ C G + +ALE+ ++ + G+ PD VTY+ L + L G + A+
Sbjct: 253 LVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAW 312
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
++ +ML +SP TYT L+ C +G M L +M RGF + S++
Sbjct: 313 EVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN-------SIIP 365
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+ ++ GLC R+DEAL + M GLSPD V+Y+ V+ G C++ + A L EM
Sbjct: 366 CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMC 425
Query: 365 EKIIWLDEYTYESLMEGLS----------------------DEVTYSSLLNDYFAQGNMQ 402
+K I + T+ +L+ GL D V Y+ +++ Y G ++
Sbjct: 426 DKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIE 485
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
+ +L + + G P T I G K + A+ I L +I L PS + Y T
Sbjct: 486 EALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI-LDVIKLYGLA-PSVVSYTT 543
Query: 463 LIE---NC 467
L++ NC
Sbjct: 544 LMDAYANC 551
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 189/418 (45%), Gaps = 45/418 (10%)
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
DK + V+ E+ + TY+ + +++E A+ + + P +VS+N++
Sbjct: 173 DKMWDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSI 228
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
+S +C+ G ++ A ++ G++P +++ LI LCL GS+ EA +L +M + V
Sbjct: 229 MSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV 288
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
P + TY L + L+G S A+ + +M +G SP ++T+ L+ G C L
Sbjct: 289 EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL--------SPDVITYTILLCGQCQL 340
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLF-GFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+D L +L+ M G +++ +V+ G C+ + +A L +M
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKA--------- 391
Query: 375 YESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
+GLS D V YS +++ G L EM LP+S T G + GL +K
Sbjct: 392 -----DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQK 446
Query: 434 ATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAI 493
A+ +L +ISS ++Y+ +I+ ++ G + EA
Sbjct: 447 GMLLEARSLLDSLISSG--ETLDIVLYNIVIDG---------------YAKSGCIEEALE 489
Query: 494 AHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
+ + + P A +N LI+ +C+ N+ +A ++ + YG P + S +L+ A
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 28/289 (9%)
Query: 38 GETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCK 97
GET ++ Y + G K C +EEA E+ + + G+ P T+N+LI G CK
Sbjct: 463 GETLDIVL---YNIVIDGYAKSGC----IEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 98 VRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAY-KVFNEMIASGFLPSVAT 156
+N+ A ++ D +++ GL+P+ +Y +L+D K+ ++ EM A G P+ T
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 575
Query: 157 YNKFITA-----------YLSSERV-EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
Y+ ++ ER+ E+ M G+ PD ++YN +I C+
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 635
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L A + + TY+ LI +LC+ G + +A + +VS S YT
Sbjct: 636 LSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 695
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
L+ A+C+ G+ MA L ++ HRG F+ S+ ++A+I+ LC
Sbjct: 696 LIKAHCVKGDPEMAVKLFHQLLHRG--------FNVSIRDYSAVINRLC 736
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 204/432 (47%), Gaps = 42/432 (9%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFIT 162
++ +++Q+R GL P+ + L++ L L D +K+F +M+ G + ++ YN +
Sbjct: 152 SIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVH 211
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
A S E+A + S M E+G+ PD+ +YN +IS +C+ +AL ++ G+ P
Sbjct: 212 ACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAP 271
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ VTY++ I +G + EA LF E ++ DV+ ++ TYT L+ YC + + A L
Sbjct: 272 NIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLR 330
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
+ M RG FSP +VT+N+++ LC R+ EA +L M + PD ++ NT
Sbjct: 331 EVMESRG--------FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNT 382
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ +C+I ++ A ++K +M E + LD Y+Y++L+ G + + + F+
Sbjct: 383 LINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFS----- 437
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGL-NKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
M G+ P T ++G N+ I K LL + L
Sbjct: 438 --------MIEKGFSPGYATYSWLVDGFYNQNKQDEITK--LLEEFEKRGL--------- 478
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
C+ V GL++ V+ A + E M + D ++ + + + R G
Sbjct: 479 -----CADVALYR--GLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTG 531
Query: 522 NVNKAYEMYKEM 533
V +A ++ M
Sbjct: 532 KVTEASALFDVM 543
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 180/389 (46%), Gaps = 15/389 (3%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
E+A++++ EM KG+ PD TYN LI CK A+ + D+M G++PN TY S
Sbjct: 220 EKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSF 279
Query: 127 IDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
I + +A ++F E I + TY I Y +++AL + M RG
Sbjct: 280 IHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGF 338
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
SP +V+YN+++ K C+DG + +A + E K I PD++T + LI A C + A
Sbjct: 339 SPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVK 398
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
+ +M+ + +Y L++ +C V E A M +G FSP T+
Sbjct: 399 VKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKG--------FSPGYATY 450
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
+ L+ G + + DE +L + GL D Y ++ C++ ++ A L M++
Sbjct: 451 SWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEK 510
Query: 366 KIIWLDEYTYESLMEGL--SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
K + D + ++ + +VT +S L D + KL + ++ + Y D+ L
Sbjct: 511 KGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISAS-YAGDNDVL 569
Query: 424 GVFINGLNKKATTSIAKGILLRMISSQCL 452
F + + + I+K IL M S+ L
Sbjct: 570 RFFWSHVGDRCL--ISKSILREMNRSEVL 596
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 151/313 (48%), Gaps = 10/313 (3%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + ++ +I C+K EA V M R G+AP+ TYN+ I G + M A L
Sbjct: 236 PDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRL 295
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+ +++ ++ N TY +LID C +D+A ++ M + GF P V TYN +
Sbjct: 296 FREIK-DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
R+ +A + + M+ + + PD ++ N +I+ +C+ ++ A+++K + +E G+ D +
Sbjct: 355 DGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYS 414
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y ALI C L A + M+ SP +TY+ L+ + + L +E
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE 474
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
RG D + + LI +C LE+VD A + M + GL D+V + T+ +
Sbjct: 475 KRGLCADVAL--------YRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYA 526
Query: 347 FCQIRELKKAYEL 359
+ + ++ +A L
Sbjct: 527 YWRTGKVTEASAL 539
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 172/350 (49%), Gaps = 12/350 (3%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P+L + ++ L ++ + ++ ++M + G+ + YN L+ K + A
Sbjct: 164 LKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAE 223
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIASGFLPSVATYNKFITAY 164
+L +M +G+ P+ TY +LI + C + +A V + M SG P++ TYN FI +
Sbjct: 224 KLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGF 283
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
R+ +A +F + + ++ + V+Y +I +C+ ++++AL ++ +G P
Sbjct: 284 SREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGV 342
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+++++ LC G + EA L EM + P N T L+ AYC + + A + +
Sbjct: 343 VTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK 402
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M G D + ++ ALIHG C + ++ A L M E G SP +Y+ ++
Sbjct: 403 MIESGLKLD--------MYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLV 454
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS--DEVTYSSLL 392
GF + + +L E +++ + D Y L+ + ++V Y+ +L
Sbjct: 455 DGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVL 504
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 104/201 (51%), Gaps = 1/201 (0%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V++ ++++LCE R+ EA ++ EM+ K + PD T N LI CK+ +M+ AV++
Sbjct: 340 PGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+M GL + +Y +LI C L+ A + MI GF P ATY+ + + +
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYN 459
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+ ++ + +RGL D+ Y +I + C+ +++ A + +KG++ D V
Sbjct: 460 QNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVI 519
Query: 227 YSALIQALCLQGSLPEAFDLF 247
++ + A G + EA LF
Sbjct: 520 FTTMAYAYWRTGKVTEASALF 540
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 140/333 (42%), Gaps = 52/333 (15%)
Query: 246 LFLEMLRGDVSPS----NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
L L L G VS + ++ LM Y G + + + +++R G P
Sbjct: 116 LVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGL--------KPH 167
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
L L++ L D I + M ++G+ + YN ++ + + +KA +L
Sbjct: 168 LQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLS 227
Query: 362 EMDEKIIWLDEYTYESLM----------EGLSDE------------VTYSSLLNDYFAQG 399
EM+EK ++ D +TY +L+ E LS + VTY+S ++ + +G
Sbjct: 228 EMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREG 287
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
M++ +L RE+ ++ + VT I+G + I + + LR + P +
Sbjct: 288 RMREATRLFREI-KDDVTANHVTYTTLIDGYCR--MNDIDEALRLREVMESRGFSPGVVT 344
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
Y++++ L +D G + EA M ++PD N LI +C+
Sbjct: 345 YNSILRK-----------LCED----GRIREANRLLTEMSGKKIEPDNITCNTLINAYCK 389
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
++ A ++ K+M+ G M+S +LIH
Sbjct: 390 IEDMVSAVKVKKKMIESGLKLDMYSYKALIHGF 422
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 32 CKEKKVGETFGLL------RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C++ ++ E LL ++EP ++ +I C+ E M A +V ++M GL D
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNE 144
+Y ALI G CKV + A E M +G SP TY L+D D+ K+ E
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
G VA Y I E+V+ A +F +M ++GL D V + + + + G+
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 205 LEKA 208
+ +A
Sbjct: 533 VTEA 536
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/521 (24%), Positives = 237/521 (45%), Gaps = 57/521 (10%)
Query: 63 KERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVR-GLSPNER 121
+ + EEA ++ R + +G PD ++ + CK +++ A++L +MR + G+ ++
Sbjct: 252 ERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQE 311
Query: 122 TYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
TY S+I + +++A +V +EM+ G SV + Y + +AL +F+ M
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
E GL+PD V ++ ++ FC++ E+EKA+E I P V +IQ CL+
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG-CLKAES 430
Query: 241 PE-AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
PE A ++F + ++ ++ +C G+ A M +G
Sbjct: 431 PEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG--------IE 481
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
P++V +N ++ C ++ +D A I M E GL P+ +Y+ ++ GF + ++ + A+++
Sbjct: 482 PNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDV 541
Query: 360 KVEMDEKIIWLDEYTYESLMEGLSDE-----------------------VTYSSLLNDYF 396
+M+ +E Y +++ GL +Y+S+++ +
Sbjct: 542 INQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFV 601
Query: 397 AQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC-LTMP 455
G+ + REM+ NG P+ VT ING K +A + M S + L +P
Sbjct: 602 KVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLP 661
Query: 456 SYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
+ Y LI+ C + K+A L + GL+ P+ +VYN LI
Sbjct: 662 A---YGALIDGFCKKNDMKTAYTLFSELPELGLM----------------PNVSVYNSLI 702
Query: 515 FDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
G ++ A ++YK+MV+ G +F+ ++I L D
Sbjct: 703 SGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 238/528 (45%), Gaps = 59/528 (11%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
+++ ++ C+ + +A ++ M +GLAPD ++ ++ CK M A+E Y
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYM 404
Query: 110 QMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNE----MIASGFLPSVATYNKFITAY 164
+M+ ++P+ ++I L + A ++FN+ IA GF+ NK +
Sbjct: 405 RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFM-----CNKIFLLF 459
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+V+ A M ++G+ P++V YN ++ C+ ++ A I +E +EKG+ P++
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFH-LHD 283
TYS LI A+D+ +M + + Y ++ C VG+ S A L +
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
++ + ++S S ++N++I G + D A+ R M E G SP+ V++ ++
Sbjct: 580 LIKEK--------RYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG---------------------- 381
+ GFC+ + A E+ EM + LD Y +L++G
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 382 LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG 441
+ + Y+SL++ + G M L ++M +G D T I+GL K ++A
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASD 751
Query: 442 ILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM 501
+ ++ + P I++ + LV S +G +A+ E M
Sbjct: 752 LYSELLDLGIV--PDEILH---------------MVLVNGLSKKGQFLKASKMLEEMKKK 794
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
V P+ +Y+ +I H R GN+N+A+ ++ EM+ G H +V +L+
Sbjct: 795 DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV-HDDTVFNLL 841
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 189/406 (46%), Gaps = 29/406 (7%)
Query: 32 CKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK+ KV L+M EP +V + ++ C + M+ A+ + EM KGL P+
Sbjct: 460 CKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNN 519
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNE 144
TY+ LI G K ++ A ++ +QM NE Y ++I+ LC KA ++
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 145 MIASG-FLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
+I + S +YN I ++ + A+ + M+E G SP++V++ ++I+ FC+
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSN 639
Query: 204 ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYT 263
++ ALE+ E + D Y ALI C + + A+ LF E+ + P+ S Y
Sbjct: 640 RMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 264 RLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALG 323
L+ + +G+ A L+ +M + G S L T+ +I GL ++ A
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDG--------ISCDLFTYTTMIDGLLKDGNINLASD 751
Query: 324 ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS 383
+ + ++G+ PD + + ++ G + + KA ++ EM +K +
Sbjct: 752 LYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDV-------------TP 798
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
+ + YS+++ + +GN+ + F+L EM G + D + ++G
Sbjct: 799 NVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 194/446 (43%), Gaps = 43/446 (9%)
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
GF + +N + AY+ ++R++ A+ F M +R + P + N V+S + +++A
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
EI + V G+ D+VT L++A + EA +F ++ P ++ + A
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQA 283
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
C + MA L EMR + +P S T+ ++I ++EA+ ++ M
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVP-------ASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVT 387
G+ ++ +++ G+C+ EL KA +L M+E EGL+ D+V
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE--------------EGLAPDKVM 382
Query: 388 YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMI 447
+S ++ + M+K + M P SV + I G K + A I
Sbjct: 383 FSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-- 440
Query: 448 SSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDG 507
+ S+I + + C+ + F +G V+ A + M ++P+
Sbjct: 441 -----SFESWIAHGFM---CNKIFLL--------FCKQGKVDAATSFLKMMEQKGIEPNV 484
Query: 508 AVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRN 567
YN ++ HCR N++ A ++ EM+ G P+ F+ LI ++ K+ + W + N
Sbjct: 485 VFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDG-FFKNKDEQNAWDVIN 543
Query: 568 TLRSCNLNDSELHQVLNEIEVKKCKI 593
+ + N +E+ + N I CK+
Sbjct: 544 QMNASNFEANEV--IYNTIINGLCKV 567
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/583 (24%), Positives = 241/583 (41%), Gaps = 84/583 (14%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
++++ V++ LC + R+E+A+ VV +M + G+ PD Y+A+I G K N+ AV+++++
Sbjct: 292 IAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNK 351
Query: 111 MRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
M + N S++ C +AY +F E + YN A +
Sbjct: 352 MLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
VE+A+ +F M +G++PD+++Y +I C G+ A ++ E G PD V Y+
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNV 471
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR- 288
L L G EAF+ M V P+ T+ ++ GE A ++ + H+
Sbjct: 472 LAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS 531
Query: 289 ---------GF-------------------LP---------------DFV---------- 295
GF LP D++
Sbjct: 532 RENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRM 591
Query: 296 --IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
+ P + LI C + V +A + + PD +Y ++ +C++ E
Sbjct: 592 WKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEP 651
Query: 354 KKAYELKVEMDEKIIWLDEYTYESLMEG---------------LSDEVTYSSLLNDYFAQ 398
K+AY L +M + + D TY L+ + D V Y+ ++N Y
Sbjct: 652 KQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHL 711
Query: 399 GNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR--------MISSQ 450
+++KV+ L ++M R +PD VT V + ++ + K ++ +I Q
Sbjct: 712 NDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQ 771
Query: 451 CLTMP---SYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDG 507
C + I+D +IE+ + L+ G + EA + +RM VKPD
Sbjct: 772 CKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDV 831
Query: 508 AVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIH 550
Y LI CR G V KA ++ KEM+ G P S LS +H
Sbjct: 832 VPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS-LSAVH 873
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 133/572 (23%), Positives = 235/572 (41%), Gaps = 75/572 (13%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSF----KGVIKELCEKERMEE 68
+VR RGF+ ++ K +GE ME LV ++K + +E
Sbjct: 115 ELVRRGDEGRGFSVMDLL----KAIGE------MEQSLVLLIRVSTALVKAYANLDMFDE 164
Query: 69 AKEVV-REMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
A ++ R G APD + N LI M V + ++ GL + TY+ ++
Sbjct: 165 AIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVV 224
Query: 128 DLLCTWWLD---KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
L W D + K+ + ++ S Y FI ++ + A + + +
Sbjct: 225 QAL--WRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDAN 282
Query: 185 LSPDL----VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
+ D ++Y V+ C + +E A + + + GI PD YSA+I+ ++
Sbjct: 283 ILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNI 342
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
P+A D+F +ML+ + + ++ YC +G FS A+ L E R S
Sbjct: 343 PKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRE--------TNISL 394
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELK 360
V +N L L +V+EA+ + R M G++PD ++Y T++ G C + A++L
Sbjct: 395 DRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLM 454
Query: 361 VEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDS 420
+EMD D Y L GL+ G Q+ F+ + M G P
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLA-------------TNGLAQEAFETLKMMENRGVKPTY 501
Query: 421 VTLGVFINGL-------------------NKKATTSIAKGILLRMISSQCL--TMPSYII 459
VT + I GL +++ S+ KG ++ CL +I
Sbjct: 502 VTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKG----FCAAGCLDHAFERFIR 557
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
+ + Y +++ KD+ +++A +RM + V+P+ ++Y LI CR
Sbjct: 558 LEFPLPKSVYFTLFTSLCAEKDY-----ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCR 612
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
NV KA E ++ +V P +F+ +I+
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINT 644
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 162/383 (42%), Gaps = 55/383 (14%)
Query: 6 ATLKSFRHMVRMN--VMIRGFATESVMSCKEKKVGETFGLLRME---PYLVSFKGVIKEL 60
A +S H R N M++GF + ++ +R+E P V F
Sbjct: 522 AFYESLEHKSRENDASMVKGFCAAGCLDHAFER------FIRLEFPLPKSVYFTLFTSLC 575
Query: 61 CEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNE 120
EK+ + +A++++ M + G+ P+ Y LI C+V N+ A E ++ + + + P+
Sbjct: 576 AEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDL 635
Query: 121 RTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSA 179
TY +I+ C K AY +F +M P V TY+ + + + L +
Sbjct: 636 FTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKRE 688
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL--------- 230
M + PD+V Y +I+++C +L+K + + + I+PD VTY+ L
Sbjct: 689 MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNL 748
Query: 231 -------------------IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
I C G L EA +F +M+ V P + YT L+ C
Sbjct: 749 SREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 272 VGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM 331
+G A + D M G PD +V + ALI G C V +A+ +++ M E
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPD--------VVPYTALIAGCCRNGFVLKAVKLVKEMLEK 860
Query: 332 GLSPDAVSYNTVLFGFCQIRELK 354
G+ P S + V + + + L+
Sbjct: 861 GIKPTKASLSAVHYAKLKAKGLR 883
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 179/472 (37%), Gaps = 97/472 (20%)
Query: 36 KVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYN 89
KV E L R + P ++++ +I C + + +A +++ EM+ G PD YN
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 90 ALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEM--- 145
L G+ A E M RG+ P T+ +I+ L+ LDKA + +
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 146 -------IASGF-------------------LPSVATYNKFITAYLSSERVEQALGIFSA 179
+ GF LP + F + + + +A +
Sbjct: 531 SRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR 590
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS 239
M + G+ P+ Y +I +C+ + KA E V K I+PD TY+ +I C
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYA----------------------------YCL 271
+A+ LF +M R DV P TY+ L+ + YC
Sbjct: 651 PKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCH 710
Query: 272 VGEFSMAFHLHDEMRHRGFLPDFV--------------------IQFSPSLVTFNALIHG 311
+ + + L +M+ R +PD V P + + LI
Sbjct: 711 LNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDW 770
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
C + + EA I M E G+ PDA Y ++ C++ LK+A K+ D I
Sbjct: 771 QCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEA---KMIFDRMI---- 823
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
ES ++ D V Y++L+ G + K KL +EM G P +L
Sbjct: 824 ----ESGVK--PDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASL 869
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/476 (22%), Positives = 179/476 (37%), Gaps = 92/476 (19%)
Query: 118 PNERTYMSLIDLLCTWWLDKAYKVF-NEMIASG----------FLPSVATYNK------- 159
P+ + Y ++I ++C W LDK F E++ G L ++ +
Sbjct: 88 PSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIR 147
Query: 160 ----FITAYLSSERVEQALGIF-SAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
+ AY + + ++A+ IF A G +PD+ + N +IS+ G + + E
Sbjct: 148 VSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWE 207
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
G+ D TY ++QAL E L +L + Y + CL
Sbjct: 208 IERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQM 267
Query: 275 FSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS 334
+A+ L +R L D S + + ++ GLC R+++A ++ M + G+
Sbjct: 268 TDIAYFLLQPLRDANILVD----KSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGID 323
Query: 335 PDAVSYNTVLFG-----------------------------------FCQIRELKKAYEL 359
PD Y+ ++ G +CQ+ +AY+L
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDL 383
Query: 360 KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
E E I LD Y + L G +++ +L REMT G PD
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALG-------------KLGKVEEAIELFREMTGKGIAPD 430
Query: 420 SVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLV 479
+ I G + S A +++ M + P +IY+ L A GL
Sbjct: 431 VINYTTLIGGCCLQGKCSDAFDLMIEMDGTG--KTPDIVIYNVL-----------AGGL- 476
Query: 480 KDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVH 535
+T GL EA + M N VKP +N++I G ++KA Y+ + H
Sbjct: 477 ---ATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEH 529
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 237/511 (46%), Gaps = 45/511 (8%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P+ SF V+ +C+ +++ A+++V M R G PD +YN+LI G C+ ++ A +
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 108 YDQMRVRG---LSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+ +R P+ ++ SL + + V+ ++ P+V TY+ +I +
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTF 173
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S ++ AL F +M LSP++V++ +I +C+ G+LE A+ + E + +
Sbjct: 174 CKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNV 233
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+ALI C +G + A +++ M+ V P++ YT ++ + G+ A +
Sbjct: 234 VTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAK 293
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M ++G D + + +I GLC ++ EA I+ M + L PD V + T++
Sbjct: 294 MLNQGMRLD--------ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMM 345
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL-----------------SDEVT 387
+ + +K A + ++ E+ D ++++G+ +++V
Sbjct: 346 NAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405
Query: 388 YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMI 447
Y+ L++ +G+ +V +L +++ G +PD +I GL K+ A + RM+
Sbjct: 406 YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMV 465
Query: 448 SSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDG 507
L + Y TLI +++GL+ EA + M N + PD
Sbjct: 466 QEGLLL--DLLAYTTLIYG---------------LASKGLMVEARQVFDEMLNSGISPDS 508
Query: 508 AVYNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
AV++LLI + + GN+ A ++ +M G
Sbjct: 509 AVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 118/479 (24%), Positives = 211/479 (44%), Gaps = 50/479 (10%)
Query: 79 KGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDK 137
+G P ++N+++ +CK+ + A ++ M G P+ +Y SLID C +
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 138 AYKVFNEMIAS-GFL--PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
A V + AS GF+ P + ++N + + +++ ++ + + SP++V+Y+
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYST 168
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
I FC+ GEL+ AL+ + P+ VT++ LI C G L A L+ EM R
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
+S + TYT L+ +C GE A ++ M + P+ + + +I G
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED--------RVEPNSLVYTTIIDGFFQ 280
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
D A+ L M G+ D +Y ++ G C +LK+A E+ +M++ +
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL------ 334
Query: 375 YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
+ D V +++++N YF G M+ + ++ G+ PD V L I+G+ K
Sbjct: 335 -------VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK-- 385
Query: 435 TTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAI 493
G L I C+ + ++Y LI+ C +F L S GLV
Sbjct: 386 -----NGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLV----- 435
Query: 494 AHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
PD +Y I C++GN+ A+++ MV G + + +LI+ L
Sbjct: 436 -----------PDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGL 483
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 156/357 (43%), Gaps = 49/357 (13%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +V+F +I C+ +E A + +EM R ++ + TY ALI G CK M A
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE 253
Query: 106 ELYDQMRVRGLSPNERTYMSLID------------------------------------L 129
E+Y +M + PN Y ++ID L
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGL 313
Query: 130 LCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
L +A ++ +M S +P + + + AY S R++ A+ ++ + ERG PD+
Sbjct: 314 CGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDV 373
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
V+ + +I ++G+L +A I +EK +DV Y+ LI ALC +G E LF +
Sbjct: 374 VALSTMIDGIAKNGQLHEA--IVYFCIEKA---NDVMYTVLIDALCKEGDFIEVERLFSK 428
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
+ + P YT + C G AF L M G L D L+ + LI
Sbjct: 429 ISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD--------LLAYTTLI 480
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
+GL S + EA + M G+SPD+ ++ ++ + + + A +L ++M +
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 189/471 (40%), Gaps = 81/471 (17%)
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A + + + S LP T NK I ++S +L + + RG +P S+N+V+
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD-- 254
S C+ G+++ A +I G PD ++Y++LI C G + A L LE LR
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA-SLVLESLRASHG 122
Query: 255 ------------------------------------VSPSNSTYTRLMYAYCLVGEFSMA 278
SP+ TY+ + +C GE +A
Sbjct: 123 FICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 279 FHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAV 338
M+ SP++VTF LI G C ++ A+ + + M + +S + V
Sbjct: 183 LKSFHSMKRDA--------LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 339 SYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQ 398
+Y ++ GFC+ E+++A E+ M E + + Y ++++G +F +
Sbjct: 235 TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDG-------------FFQR 281
Query: 399 GNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYI 458
G+ K +M G D GV I+GL A I+ M S +P +
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD--LVPDMV 339
Query: 459 IYDTLIENCSYVE---FKSAVGLVKDFSTRGL---------VNEAAIAHERMHNMSV--- 503
I+ T++ +Y + K+AV + RG + + + ++H V
Sbjct: 340 IFTTMMN--AYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFC 397
Query: 504 --KPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
K + +Y +LI C+ G+ + ++ ++ G P F S I L
Sbjct: 398 IEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 123/248 (49%), Gaps = 16/248 (6%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
+ ++ +I LC +++EA E+V +M + L PD + ++ K M AV +Y
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362
Query: 110 QMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVF-----NEMIASGFLPSVATYNKFITA 163
++ RG P+ ++ID + L +A F N+++ + + ++ FI
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFI-- 420
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
VE+ +FS ++E GL PD Y + I+ C+ G L A ++K V++G+L D
Sbjct: 421 -----EVER---LFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLD 472
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+ Y+ LI L +G + EA +F EML +SP ++ + L+ AY G + A L
Sbjct: 473 LLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLL 532
Query: 284 EMRHRGFL 291
+M+ RG +
Sbjct: 533 DMQRRGLV 540
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 139/340 (40%), Gaps = 47/340 (13%)
Query: 298 FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
++P +FN+++ +C L +V A I+ MP G PD +SYN+++ G C+ +++ A
Sbjct: 52 YTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS 111
Query: 358 ELKVEMDEK---IIWLDEYTYESLMEGLS-----DEV----------------TYSSLLN 393
+ + I D ++ SL G S DEV TYS+ ++
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWID 171
Query: 394 DYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
+ G +Q K M R+ P+ VT I+G K +A + M +
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM--RRVRM 229
Query: 454 MPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLL 513
+ + Y LI+ F +G + A + RM V+P+ VY +
Sbjct: 230 SLNVVTYTALIDG---------------FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTI 274
Query: 514 IFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCN 573
I +RG+ + A + +M++ G + + +I L + K E ++ + +S
Sbjct: 275 IDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDL 334
Query: 574 LNDSELHQVLNEIEVKKCKIDALLNALAKIAVDGMLLDRG 613
+ D + + K ++ A +N K L++RG
Sbjct: 335 VPDMVIFTTMMNAYFKSGRMKAAVNMYHK------LIERG 368
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 189/409 (46%), Gaps = 31/409 (7%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V F ++ + + + E + R + G++ D ++ LI C+ + A+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+M G P+ T+ SL++ C +A + ++++ G+ P+V YN I +
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+V AL + M + G+ PD+V+YN++I++ G + I ++ + GI PD +T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+SALI +G L EA + EM++ V+P+ TY L+ C+ G A + + +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
+GF P+ VT+N LI+G C +RVD+ + IL M G+ D +YNT+ G
Sbjct: 317 SKGFFPN--------AVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE--------------------- 385
+CQ + A ++ M + D YT+ L++GL D
Sbjct: 369 YCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVG 428
Query: 386 -VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
+TY+ ++ ++ + L + G PD +T + GL +K
Sbjct: 429 IITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 168/342 (49%), Gaps = 13/342 (3%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L EP +V+F ++ C R EA +V ++ G P+ YN +I +C+ +
Sbjct: 143 LGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNT 202
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLL---CTWWLDKAYKVFNEMIASGFLPSVATYNKF 160
A+++ M+ G+ P+ TY SLI L TW + + ++ ++M+ G P V T++
Sbjct: 203 ALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV--SARILSDMMRMGISPDVITFSAL 260
Query: 161 ITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI 220
I Y ++ +A ++ M +R ++P++V+YN++I+ C G L++A ++ V KG
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGF 320
Query: 221 LPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFH 280
P+ VTY+ LI C + + + M R V TY L YC G+FS A
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 281 LHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSY 340
+ M G PD + TFN L+ GLC ++ +AL L + + ++Y
Sbjct: 381 VLGRMVSCGVHPD--------MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
Query: 341 NTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL 382
N ++ G C+ +++ A+ L + K + D TY ++M GL
Sbjct: 433 NIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 203/453 (44%), Gaps = 41/453 (9%)
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKV 141
P ++ L+ + K+ + L+ + + G+S + ++ +LID C L A
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 142 FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
+M+ GF PS+ T+ + + R +A+ + + G P++V YN +I C+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 202 DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
G++ AL++ + GI PD VTY++LI L G+ + + +M+R +SP T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA 321
++ L+ Y G+ A ++EM R +P++VT+N+LI+GLC +DEA
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQR--------SVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 322 LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG 381
+L + G P+AV+YNT++ G+C+ + + ++ M + D +TY +L +G
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 382 LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG 441
Y G K+ M G PD T + ++GL I K
Sbjct: 369 -------------YCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHG--KIGKA 413
Query: 442 ILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHN 500
++ + T+ I Y+ +I+ C + + A L + +G
Sbjct: 414 LVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG-------------- 459
Query: 501 MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
V PD Y ++ R+ +A+E+Y++M
Sbjct: 460 --VSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 157/326 (48%), Gaps = 18/326 (5%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKE 71
NV+I +S+ C++ +V +L+ + P +V++ +I L +
Sbjct: 183 NVVIYNTIIDSL--CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
++ +M R G++PD T++ALI K +L A + Y++M R ++PN TY SLI+ LC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 132 T-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
LD+A KV N +++ GF P+ TYN I Y ++RV+ + I M+ G+ D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+YN + +CQ G+ A ++ V G+ PD T++ L+ LC G + +A ++
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIH 310
+ TY ++ C + A++L + +G SP ++T+ ++
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKG--------VSPDVITYITMMI 472
Query: 311 GLCSLERVDEALGILRGM-PEMGLSP 335
GL EA + R M E GL P
Sbjct: 473 GLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/446 (22%), Positives = 186/446 (41%), Gaps = 53/446 (11%)
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
+ A +F +M S LPS+ +++ + A + E + +F + G+S DL S+ +
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
I FC+ L AL + ++ G P VT+ +L+ C EA L +++
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
P+ Y ++ + C G+ + A + M+ G PD +VT+N+LI L
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPD--------VVTYNSLITRLFHS 232
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGF---CQIRELKKAYELKVEMDEKIIWLDE 372
+ IL M MG+SPD ++++ ++ + Q+ E KK Y EM ++ + +
Sbjct: 233 GTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYN---EMIQRSVNPNI 289
Query: 373 YTYESLMEGL----------------------SDEVTYSSLLNDYFAQGNMQKVFKLERE 410
TY SL+ GL + VTY++L+N Y + K+
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYV 470
M+R+G D+ T G + S A+ +L RM+S C P ++ L++
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS--CGVHPDMYTFNILLDG---- 403
Query: 471 EFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMY 530
G + +A + E + YN++I C+ V A+ ++
Sbjct: 404 -----------LCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Query: 531 KEMVHYGFFPHMFSVLSLIHALYYDR 556
+ G P + + ++++ L R
Sbjct: 453 CSLALKGVSPDVITYITMMIGLRRKR 478
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 169/400 (42%), Gaps = 42/400 (10%)
Query: 155 ATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
+ Y + + + L S + AL +F MAE P +V ++ ++ + + E + +
Sbjct: 45 SDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRH 104
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
GI D +++ LI C L A +M++ PS T+ L+ +C V
Sbjct: 105 LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNR 164
Query: 275 FSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS 334
F A L D++ G+ P+ VI +N +I LC +V+ AL +L+ M +MG+
Sbjct: 165 FYEAMSLVDQIVGLGYEPNVVI--------YNTIIDSLCEKGQVNTALDVLKHMKKMGIR 216
Query: 335 PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLN 393
PD V+YN+++ + + +M + G+S D +T+S+L++
Sbjct: 217 PDVVTYNSLITRLFHSGTWGVSARILSDM--------------MRMGISPDVITFSALID 262
Query: 394 DYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
Y +G + + K EM + P+ VT INGL AK +L ++S
Sbjct: 263 VYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG--F 320
Query: 454 MPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNL 512
P+ + Y+TLI C + ++ S G V D YN
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG----------------VDGDTFTYNT 364
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
L +C+ G + A ++ MV G P M++ L+ L
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGL 404
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 213/462 (46%), Gaps = 57/462 (12%)
Query: 138 AYKVFNEMIASGFLPSVATYNKFITA---YLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
A ++F +MI P++ T N + Y SS + A +F M + G+S ++ ++N
Sbjct: 150 ALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNV 209
Query: 195 VISKFCQDGELEKALEIKAETV-EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+++ +C +G+LE AL + V E + PD+VTY+ +++A+ +G L + +L L+M +
Sbjct: 210 LVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKN 269
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
+ P+ TY L+Y YC +G AF + + M+ LPD L T+N LI+GLC
Sbjct: 270 GLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPD--------LCTYNILINGLC 321
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
+ + E L ++ M + L PD V+YNT++ G ++ +A +L +M+ + ++
Sbjct: 322 NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQV 381
Query: 374 TYE-SL---------------------MEGLS-DEVTYSSLLNDYFAQGNMQKVFKLERE 410
T+ SL M G S D VTY +L+ Y G++ ++ RE
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI------ 464
M + G +++TL ++ L K+ A +L + + Y TLI
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV--DEVTYGTLIMGFFRE 499
Query: 465 ----------ENCSYVEFKSAVG----LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVY 510
+ V+ V L+ G A + + + PD + +
Sbjct: 500 EKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 511 NLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
N +I +C+ G V KA+E Y E + + F P ++ L++ L
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 238/525 (45%), Gaps = 57/525 (10%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLL-------RMEPYLVSFKGVIKELCEKERMEEAK 70
NV++ G+ C E K+ + G+L ++ P V++ ++K + +K R+ + K
Sbjct: 208 NVLVNGY-------CLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLK 260
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
E++ +M + GL P+ TYN L+ G CK+ ++ A ++ + M+ + P+ TY LI+ L
Sbjct: 261 ELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGL 320
Query: 131 CTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
C + + ++ + M + P V TYN I +A + M G+ +
Sbjct: 321 CNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQ 380
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVE-KGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
V++N + C++ + E E V+ G PD VTY LI+A G L A ++
Sbjct: 381 VTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNAL 308
EM + + + T ++ A C + A +L + RGF+ D V T+ L
Sbjct: 441 EMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV--------TYGTL 492
Query: 309 IHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKII 368
I G E+V++AL + M ++ ++P ++N+++ G C + + A E
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME---------- 542
Query: 369 WLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFIN 428
DE L L D+ T++S++ Y +G ++K F+ E ++ + PD+ T + +N
Sbjct: 543 KFDELAESGL---LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLN 599
Query: 429 GLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGL 487
GL K+ T A +I + + + Y+T+I C + K A L+ + +GL
Sbjct: 600 GLCKEGMTEKALNFFNTLIEEREV---DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGL 656
Query: 488 VNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
+PD YN I G +++ E+ K+
Sbjct: 657 ----------------EPDRFTYNSFISLLMEDGKLSETDELLKK 685
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 202/414 (48%), Gaps = 32/414 (7%)
Query: 7 TLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERM 66
+LK +V N +I G E +S + +K+ E ++ V+ +K LC++E+
Sbjct: 338 SLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR 396
Query: 67 EEAKEVVREM-NRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
E V+E+ + G +PD TY+ LI KV ++ A+E+ +M +G+ N T +
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 126 LIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
++D LC LD+A+ + N GF+ TY I + E+VE+AL ++ M +
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
++P + ++N++I C G+ E A+E E E G+LPDD T++++I C +G + +AF
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+ + E ++ P N T L+ C G A + F + + VT
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN---------FFNTLIEEREVDTVT 627
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF------GFCQIRELKKAY- 357
+N +I C +++ EA +L M E GL PD +YN+ + + EL K +
Sbjct: 628 YNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFS 687
Query: 358 --------ELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQK 403
+L+VE ++ + T ES E ++ + YS ++++ ++G +++
Sbjct: 688 GKFGSMKRDLQVETEK-----NPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/416 (20%), Positives = 163/416 (39%), Gaps = 104/416 (25%)
Query: 237 QGSLPEAFD-----LFLEMLRGDVSPSN-STYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
Q S+PEAF + ++R +S + L+ +Y + S++ L + + H
Sbjct: 66 QTSIPEAFPSDSPLPLISVVRSLLSHHKFADAKSLLVSYIRTSDASLS--LCNSLLH--- 120
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ- 349
P+ + PS F+ + + AL I + M + L P+ ++ NT+L G +
Sbjct: 121 -PNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRY 179
Query: 350 --------IRE-------------------LKKAYELKVEMDEKIIWL-----------D 371
RE L Y L+ ++++ + L D
Sbjct: 180 PSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPD 239
Query: 372 EYTYESLMEGLS----------------------DEVTYSSLLNDYFAQGNMQKVFKLER 409
TY ++++ +S + VTY++L+ Y G++++ F++
Sbjct: 240 NVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVE 299
Query: 410 EMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSY 469
M + LPD T + INGL S+ +G+ L P + Y+TLI+ C
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAG--SMREGLELMDAMKSLKLQPDVVTYNTLIDGC-- 355
Query: 470 VEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVK------------------------- 504
F+ + L + N+ A++ HN+S+K
Sbjct: 356 --FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFS 413
Query: 505 PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSE 560
PD Y+ LI + + G+++ A EM +EM G + ++ +++ AL +RK E
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 169/352 (48%), Gaps = 32/352 (9%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P V++ +I LC++ ++A+++ EM G PD +NAL+ G CK+ M+ A
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288
Query: 106 ELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
EL G R Y SLID L +A++++ M+ P + Y I
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL 348
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ ++E AL + S+M +G+SPD YNAVI C G LE+ ++ E E PD
Sbjct: 349 SKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA 408
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
T++ LI ++C G + EA ++F E+ + SPS +T+ L+ C GE A L +
Sbjct: 409 CTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK 468
Query: 285 MR---------------HRGF---------------LPDFV-IQFSPSLVTFNALIHGLC 313
M +R F L F SP +V++N LI+G C
Sbjct: 469 MEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFC 528
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
+D AL +L + GLSPD+V+YNT++ G ++ ++A++L D+
Sbjct: 529 RAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDD 580
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 218/509 (42%), Gaps = 48/509 (9%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F VI L E + + + E+ G++ D + LI K+ AVE + +M+
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 113 VRGLSPNERTYMSLIDLLC--TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
P+ TY ++ ++ + A+ V+NEM+ P++ T+ + R
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
A +F M RG+SP+ V+Y +IS CQ G + A ++ E G PD V ++AL
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
+ C G + EAF+L + Y+ L+ ++ AF L+ M +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
PD ++ + LI GL ++++AL +L MP G+SPD YN V+ C
Sbjct: 335 KPDIIL--------YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR 386
Query: 351 RELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLERE 410
L++ L++EM E E D T++ L+ G +++ ++ E
Sbjct: 387 GLLEEGRSLQLEMSE-------------TESFPDACTHTILICSMCRNGLVREAEEIFTE 433
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC------LTMPSYIIYDTLI 464
+ ++G P T I+GL K A+ +L +M + L+ +DT++
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV 493
Query: 465 ENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVN 524
E+ S ++ + R L + A + PD YN+LI CR G+++
Sbjct: 494 ESGSILK-----------AYRDLAHFA--------DTGSSPDIVSYNVLINGFCRAGDID 534
Query: 525 KAYEMYKEMVHYGFFPHMFSVLSLIHALY 553
A ++ + G P + +LI+ L+
Sbjct: 535 GALKLLNVLQLKGLSPDSVTYNTLINGLH 563
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 113/409 (27%), Positives = 181/409 (44%), Gaps = 49/409 (11%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P + VIK LC + +EE + + EM+ PD T+ LIC MC+ + A
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEM----IASGFLPSVATYNKF 160
E++ ++ G SP+ T+ +LID LC + L +A + ++M AS FL + N+
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRS 488
Query: 161 ITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI 220
+ S + +A + A+ G SPD+VSYN +I+ FC+ G+++ AL++ KG+
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 221 LPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFH 280
PD VTY+ LI L G EAF LF + D S + Y LM C + +AF+
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCRKRKVLVAFN 606
Query: 281 -----------LHDEMRH---------------RGFLPDFVIQFSPSLVTFNALIHGLCS 314
L DE + R + + +L + + GLC
Sbjct: 607 LWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQ 666
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
R EAL + + E + S ++ G C+ +L A E+ + YT
Sbjct: 667 SGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFL-----------YT 715
Query: 375 YESLMEGLSDEVTY--SSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
++ + + Y SSLL + M+ V +L M R GY DS+
Sbjct: 716 LDNNFKLMPRVCNYLLSSLLE---STEKMEIVSQLTNRMERAGYNVDSM 761
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 29/280 (10%)
Query: 332 GLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSL 391
G+S D+ + ++ + ++ +KA E M E D +TY ++ + E + L
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC 451
F + EM + P+ T G+ ++GL KK TS A+ + M
Sbjct: 182 ------------AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG- 228
Query: 452 LTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
P+ + Y LI GL + RG ++A M PD +N
Sbjct: 229 -ISPNRVTYTILIS-----------GLCQ----RGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRS 571
L+ C+ G + +A+E+ + GF + SLI L+ R+ ++ + N L+
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 572 CNLNDSELHQVLNEIEVKKCKIDALLNALAKIAVDGMLLD 611
D L+ +L + K KI+ L L+ + G+ D
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 231/534 (43%), Gaps = 49/534 (9%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V+F +I C++ M+ A ++ + M ++G+ PD Y+ LI G K + +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+ Q +G+ + + S ID+ + L A V+ M+ G P+V TY I
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
R+ +A G++ + +RG+ P +V+Y+++I FC+ G L + + ++ G PD V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y L+ L QG + A ++ML + + + L+ +C + F A + M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
G PD + TF ++ R++EAL + M +MGL PDA++Y T++
Sbjct: 524 IYGIKPD--------VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDA 575
Query: 347 FCQIRELKKAYELKVEMDEKIIWLD--------------------EYTYESLMEGL--SD 384
FC+ + +L M I D + +L+EG D
Sbjct: 576 FCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 635
Query: 385 EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK----------- 433
VTY++++ Y + + + ++ + + P++VTL + I+ L K
Sbjct: 636 IVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFS 695
Query: 434 -------ATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRG 486
++ G L+ S S+ +++ + E S ++ RG
Sbjct: 696 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 755
Query: 487 LVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
V+EA + + + PD Y +LI +C+ G + +A +Y+ M+ G P
Sbjct: 756 RVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 147/631 (23%), Positives = 263/631 (41%), Gaps = 104/631 (16%)
Query: 46 MEPYLVSFKG-VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
+EP VS G V+ L K + +A + R + +G + N ++ G+ V + A
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVA 270
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
L + G +PN T+ +LI+ C +D+A+ +F M G P + Y+ I
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
Y + + +FS +G+ D+V +++ I + + G+L A + + +GI P+
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
VTY+ LI+ LC G + EAF ++ ++L+ + PS TY+ L+ +C G F L++
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450
Query: 284 EMRHRGFLPDFVI------------------QFSP---------SLVTFNALIHGLCSLE 316
+M G+ PD VI +FS ++V FN+LI G C L
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 317 RVDEALGILRGM------PE-----------------------------MGLSPDAVSYN 341
R DEAL + R M P+ MGL PDA++Y
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLD--------------------EYTYESLMEG 381
T++ FC+ + +L M I D + +L+EG
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 382 L--SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIA 439
D VTY++++ Y + + + ++ + + P++VTL + I+ L K +
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK--NNDMD 688
Query: 440 KGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMH 499
I + I ++ + P+ + Y L++ F +V + F E M
Sbjct: 689 GAIRMFSIMAEKGSKPNAVTYGCLMD-----WFSKSVDIEGSFKL----------FEEMQ 733
Query: 500 NMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNS 559
+ P Y+++I C+RG V++A ++ + + P + + LI +
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 560 EMGWVIRNTLRSCNLNDSELHQVLNEIEVKK 590
E + + LR+ D L + L+E K
Sbjct: 794 EAALLYEHMLRNGVKPDDLLQRALSEYNPPK 824
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 191/438 (43%), Gaps = 44/438 (10%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERM 66
++V ++I+G C++ ++ E FG+ MEP +V++ +I C+ +
Sbjct: 390 NVVTYTILIKGL-------CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
+ +M + G PD Y L+ G+ K ML A+ +M + + N + SL
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 127 IDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
ID C D+A KVF M G P VAT+ + + R+E+AL +F M + GL
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
PD ++Y +I FC+ + L++ I D + +I L + +A
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
F ++ G + P TY ++ YC + A + + ++ V F P+ VT
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK--------VTPFGPNTVTL 674
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
LIH LC +D A+ + M E G P+AV+Y ++ F + +++ +++L EM E
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 366 KIIWLDEYTYESLMEG----------------------LSDEVTYSSLLNDYFAQGNMQK 403
K I +Y +++G L D V Y+ L+ Y G + +
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
Query: 404 VFKLEREMTRNGYLPDSV 421
L M RNG PD +
Sbjct: 795 AALLYEHMLRNGVKPDDL 812
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 171/391 (43%), Gaps = 27/391 (6%)
Query: 4 LRATLKSFRHMVRMN---------VMIRGFATESVM----SCKEKKVGETFGLLRMEPYL 50
LR+ + M++M V++ G + + +M K +G++ L +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL-----NV 496
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
V F +I C R +EA +V R M G+ PD T+ ++ + A+ L+ +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR 556
Query: 111 MRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
M GL P+ Y +LID C ++F+ M + +A N I R
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHR 616
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
+E A F+ + E + PD+V+YN +I +C L++A I P+ VT +
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
LI LC + A +F M P+ TY LM + + +F L +EM+ +G
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 290 FLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
SPS+V+++ +I GLC RVDEA I + L PD V+Y ++ G+C+
Sbjct: 737 I--------SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCK 788
Query: 350 IRELKKAYELKVEMDEKIIWLDEYTYESLME 380
+ L +A L M + D+ +L E
Sbjct: 789 VGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 206/481 (42%), Gaps = 81/481 (16%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
A++ + + G P+ T + L+ D A KVF+EMI +
Sbjct: 86 ALKYFRWAEISGKDPSFYTIAHV--LIRNGMFDVADKVFDEMITNR-------------- 129
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG-ILP 222
+ + ++ +R L D+ + ++ C+ G ++KALEI + + G ++P
Sbjct: 130 -------GKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIP 180
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN-STYTRLMYAYCLVGEFSMAFHL 281
D Y ++ +L + D F ++ RG + PS S + ++ A GE + A
Sbjct: 181 QDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDF 239
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
H + RG F +V+ N ++ GL S+++++ A +L + + G +P+ V++
Sbjct: 240 HRLVMERG--------FRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS------------------ 383
T++ GFC+ E+ +A++L M+++ I D Y +L++G
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 384 ----DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIA 439
D V +SS ++ Y G++ + + M G P+ VT + I GL + A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 440 KGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKD----------------- 481
G+ +++ PS + Y +LI+ C +S L +D
Sbjct: 411 FGMYGQILKRG--MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 482 --FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFF 539
S +GL+ A +M S++ + V+N LI CR ++A ++++ M YG
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 540 P 540
P
Sbjct: 529 P 529
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +VS+ +I LC++ R++EA + + L PD Y LI G CKV ++ A
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWL 135
LY+ M G+ P++ +L + WL
Sbjct: 797 LLYEHMLRNGVKPDDLLQRALSEYNPPKWL 826
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 170/327 (51%), Gaps = 12/327 (3%)
Query: 57 IKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGL 116
I C+ + EEA +++ L P+ Y++ + +C +ML A ++ ++ GL
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 117 SPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
P+ Y ++ID C DKA++ F ++ SG PS+ T I A + A
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
+F M GL D+V+YN ++ + + +L K E+ E GI PD TY+ LI ++
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
++G + EA ++ E++R PS +T ++ + G+F AF L M
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD-------- 576
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
++ P +VT +AL+HG C +R+++A+ + + + GL PD V YNT++ G+C + +++K
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGL 382
A EL M ++ + +E T+ +L+ GL
Sbjct: 637 ACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 200/491 (40%), Gaps = 74/491 (15%)
Query: 86 ETYNALICGMC-KVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFN 143
ET +++ C + R + A++L ++ G+ P+ +SL+ ++L L+ A +
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 144 EMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
M++ G + A + FI Y S ++ + M G+ PD+V++ I K C+ G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 204 ELEKALEI------------------------KAETVEKGI--------LPDDVTYSALI 231
L++A + K E+ I P+ YS+ +
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFL 380
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
+C G + A +F E+ + P YT ++ YC +G AF + G
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-- 438
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
PSL T LI + +A + R M GL D V+YN ++ G+ +
Sbjct: 439 ------NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV-TYSSLLNDYFAQGNMQKVFKLERE 410
+L K +EL EM G+S +V TY+ L++ +G + + ++ E
Sbjct: 493 QLNKVFELIDEMRSA--------------GISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYV 470
+ R G++P ++ I G +K+ + +L + P + CS
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRG--DFQEAFILWFYMADLRMKPDVV-------TCS-- 587
Query: 471 EFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMY 530
L+ + + +A + ++ + +KPD +YN LI +C G++ KA E+
Sbjct: 588 ------ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 531 KEMVHYGFFPH 541
MV G P+
Sbjct: 642 GLMVQRGMLPN 652
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 176/425 (41%), Gaps = 50/425 (11%)
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
G PS + L +E A M RG + + I K+C DG +K
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
E+ GI PD V ++ I LC G L EA + ++ +S + + + ++
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
+C VG+ A L R R P++ +++ + +CS + A I + +
Sbjct: 351 FCKVGKPEEAIKLIHSFRLR-----------PNIFVYSSFLSNICSTGDMLRASTIFQEI 399
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYE-----LKV----EMDEKIIWLD-------- 371
E+GL PD V Y T++ G+C + KA++ LK + I +
Sbjct: 400 FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSI 459
Query: 372 ---EYTYESL-MEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVF 426
E + ++ EGL D VTY++L++ Y + KVF+L EM G PD T +
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 427 INGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRG 486
I+ + + A I+ +I +PS + + +I FS RG
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRG--FVPSTLAFTDVIGG---------------FSKRG 562
Query: 487 LVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVL 546
EA I M ++ +KPD + L+ +C+ + KA ++ +++ G P +
Sbjct: 563 DFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYN 622
Query: 547 SLIHA 551
+LIH
Sbjct: 623 TLIHG 627
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 129/301 (42%), Gaps = 39/301 (12%)
Query: 32 CKEKKVGETFGLL---RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETY 88
CK K E L+ R+ P + + + +C M A + +E+ GL PDC Y
Sbjct: 352 CKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCY 411
Query: 89 NALICGMC-----------------------------------KVRNMLCAVELYDQMRV 113
+I G C + ++ A ++ M+
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 114 RGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQ 172
GL + TY +L+ T L+K +++ +EM ++G P VATYN I + + +++
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
A I S + RG P +++ VI F + G+ ++A + + + PD VT SAL+
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
C + +A LF ++L + P Y L++ YC VG+ A L M RG LP
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 293 D 293
+
Sbjct: 652 N 652
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 148/370 (40%), Gaps = 45/370 (12%)
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
++ ++ AL++ + + GI P +L++ + L A + ML + +
Sbjct: 213 RERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAA 272
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
+ + YC G F + L M+H G PD +V F I LC + E
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKE 324
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
A +L + G+S D+VS ++V+ GFC++ + ++A +L +
Sbjct: 325 ATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-------------- 370
Query: 381 GLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAK 440
+ YSS L++ + G+M + + +E+ G LPD V I+G T A
Sbjct: 371 --PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 441 GILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHN 500
++ S PS LI CS G +++A M
Sbjct: 429 QYFGALLKSG--NPPSLTTSTILIGACSRF---------------GSISDAESVFRNMKT 471
Query: 501 MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL----YYDR 556
+K D YN L+ + + +NK +E+ EM G P + + LIH++ Y D
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 557 KNSEMGWVIR 566
N + +IR
Sbjct: 532 ANEIISELIR 541
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
LRM+P +V+ ++ C+ +RME+A + ++ GL PD YN LI G C V ++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 104 AVELYDQMRVRGLSPNERTYMSLI 127
A EL M RG+ PNE T+ +L+
Sbjct: 637 ACELIGLMVQRGMLPNESTHHALV 660
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 170/327 (51%), Gaps = 12/327 (3%)
Query: 57 IKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGL 116
I C+ + EEA +++ L P+ Y++ + +C +ML A ++ ++ GL
Sbjct: 348 IDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 117 SPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
P+ Y ++ID C DKA++ F ++ SG PS+ T I A + A
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
+F M GL D+V+YN ++ + + +L K E+ E GI PD TY+ LI ++
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
++G + EA ++ E++R PS +T ++ + G+F AF L M
Sbjct: 525 VRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMAD-------- 576
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
++ P +VT +AL+HG C +R+++A+ + + + GL PD V YNT++ G+C + +++K
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGL 382
A EL M ++ + +E T+ +L+ GL
Sbjct: 637 ACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 200/491 (40%), Gaps = 74/491 (15%)
Query: 86 ETYNALICGMC-KVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFN 143
ET +++ C + R + A++L ++ G+ P+ +SL+ ++L L+ A +
Sbjct: 201 ETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVE 260
Query: 144 EMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
M++ G + A + FI Y S ++ + M G+ PD+V++ I K C+ G
Sbjct: 261 HMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAG 320
Query: 204 ELEKALEI------------------------KAETVEKGI--------LPDDVTYSALI 231
L++A + K E+ I P+ YS+ +
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFL 380
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
+C G + A +F E+ + P YT ++ YC +G AF + G
Sbjct: 381 SNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSG-- 438
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
PSL T LI + +A + R M GL D V+YN ++ G+ +
Sbjct: 439 ------NPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV-TYSSLLNDYFAQGNMQKVFKLERE 410
+L K +EL EM G+S +V TY+ L++ +G + + ++ E
Sbjct: 493 QLNKVFELIDEMRSA--------------GISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYV 470
+ R G++P ++ I G +K+ + +L + P + CS
Sbjct: 539 LIRRGFVPSTLAFTDVIGGFSKRG--DFQEAFILWFYMADLRMKPDVV-------TCS-- 587
Query: 471 EFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMY 530
L+ + + +A + ++ + +KPD +YN LI +C G++ KA E+
Sbjct: 588 ------ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 531 KEMVHYGFFPH 541
MV G P+
Sbjct: 642 GLMVQRGMLPN 652
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 176/425 (41%), Gaps = 50/425 (11%)
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
G PS + L +E A M RG + + I K+C DG +K
Sbjct: 231 GIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKG 290
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
E+ GI PD V ++ I LC G L EA + ++ +S + + + ++
Sbjct: 291 WELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDG 350
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
+C VG+ A L R R P++ +++ + +CS + A I + +
Sbjct: 351 FCKVGKPEEAIKLIHSFRLR-----------PNIFVYSSFLSNICSTGDMLRASTIFQEI 399
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYE-----LKV----EMDEKIIWLD-------- 371
E+GL PD V Y T++ G+C + KA++ LK + I +
Sbjct: 400 FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSI 459
Query: 372 ---EYTYESL-MEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVF 426
E + ++ EGL D VTY++L++ Y + KVF+L EM G PD T +
Sbjct: 460 SDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNIL 519
Query: 427 INGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRG 486
I+ + + A I+ +I +PS + + +I FS RG
Sbjct: 520 IHSMVVRGYIDEANEIISELIRRG--FVPSTLAFTDVIGG---------------FSKRG 562
Query: 487 LVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVL 546
EA I M ++ +KPD + L+ +C+ + KA ++ +++ G P +
Sbjct: 563 DFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYN 622
Query: 547 SLIHA 551
+LIH
Sbjct: 623 TLIHG 627
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 129/301 (42%), Gaps = 39/301 (12%)
Query: 32 CKEKKVGETFGLL---RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETY 88
CK K E L+ R+ P + + + +C M A + +E+ GL PDC Y
Sbjct: 352 CKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCY 411
Query: 89 NALICGMC-----------------------------------KVRNMLCAVELYDQMRV 113
+I G C + ++ A ++ M+
Sbjct: 412 TTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 114 RGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQ 172
GL + TY +L+ T L+K +++ +EM ++G P VATYN I + + +++
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
A I S + RG P +++ VI F + G+ ++A + + + PD VT SAL+
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
C + +A LF ++L + P Y L++ YC VG+ A L M RG LP
Sbjct: 592 GYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLP 651
Query: 293 D 293
+
Sbjct: 652 N 652
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 148/370 (40%), Gaps = 45/370 (12%)
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
++ ++ AL++ + + GI P +L++ + L A + ML + +
Sbjct: 213 RERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAA 272
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
+ + YC G F + L M+H G PD +V F I LC + E
Sbjct: 273 VLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPD--------IVAFTVFIDKLCKAGFLKE 324
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
A +L + G+S D+VS ++V+ GFC++ + ++A +L +
Sbjct: 325 ATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR-------------- 370
Query: 381 GLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAK 440
+ YSS L++ + G+M + + +E+ G LPD V I+G T A
Sbjct: 371 --PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAF 428
Query: 441 GILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHN 500
++ S PS LI CS G +++A M
Sbjct: 429 QYFGALLKSG--NPPSLTTSTILIGACSRF---------------GSISDAESVFRNMKT 471
Query: 501 MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL----YYDR 556
+K D YN L+ + + +NK +E+ EM G P + + LIH++ Y D
Sbjct: 472 EGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDE 531
Query: 557 KNSEMGWVIR 566
N + +IR
Sbjct: 532 ANEIISELIR 541
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
LRM+P +V+ ++ C+ +RME+A + ++ GL PD YN LI G C V ++
Sbjct: 577 LRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEK 636
Query: 104 AVELYDQMRVRGLSPNERTYMSLI 127
A EL M RG+ PNE T+ +L+
Sbjct: 637 ACELIGLMVQRGMLPNESTHHALV 660
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 158/316 (50%), Gaps = 9/316 (2%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
+M +A+++ EM +G+ D Y +LI C+ NM A L+D++ +GLSP+ TY
Sbjct: 309 KMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYG 368
Query: 125 SLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
+LID +C + A + NEM + G + +N I Y V++A I+ M ++
Sbjct: 369 ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
G D+ + N + S F + ++A + +E G+ V+Y+ LI C +G++ EA
Sbjct: 429 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEA 488
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
LF+EM V P+ TY ++YAYC G+ A L M G PD
Sbjct: 489 KRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSY-------- 540
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
T+ +LIHG C + VDEA+ + M GL ++V+Y ++ G + + +A+ L EM
Sbjct: 541 TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Query: 364 DEKIIWLDEYTYESLM 379
K +D Y +L+
Sbjct: 601 KRKGYTIDNKVYTALI 616
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 210/477 (44%), Gaps = 47/477 (9%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
EE V M +KGL+ D + + K R + +E++ +M G+ + +
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIV 230
Query: 127 IDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
++ LC ++K+ K+ E G P TYN I AY+ G+ M + G+
Sbjct: 231 VEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGV 290
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
+ V+Y ++ ++G++ A ++ E E+GI D Y++LI C +G++ AF
Sbjct: 291 VYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFL 350
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
LF E+ +SPS+ TY L+ C VGE A L +EM+ +G + + V F
Sbjct: 351 LFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKG--------VNITQVVF 402
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
N LI G C VDEA I M + G D + NT+ F +++ DE
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY----------DE 452
Query: 366 KIIWLDEYTYESLMEG---LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
WL +MEG LS V+Y++L++ Y +GN+++ +L EM+ G P+++T
Sbjct: 453 AKQWLFR-----MMEGGVKLS-TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 423 LGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKD 481
V I K+ A+ + M ++ P Y +LI C A+ L +
Sbjct: 507 YNVMIYAYCKQGKIKEARKLRANMEANG--MDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 482 FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
+GL + Y ++I + G ++A+ +Y EM G+
Sbjct: 565 MGLKGL----------------DQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 177/418 (42%), Gaps = 40/418 (9%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
++ +VF+ M+ G + F+ A R++ L IF M + G+ + S
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTI 229
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
V+ C+ GE+EK+ ++ E KGI P+ TY+ +I A Q + M +
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
V + TYT LM G+ S A L DEMR RG D + SL+++N C
Sbjct: 290 VVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD--VHVYTSLISWN------CR 341
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+ A + + E GLSP + +Y ++ G C++ E+ A L EM K + + +
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 375 YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
+ +L++G Y +G + + + M + G+ D T + N+
Sbjct: 402 FNTLIDG-------------YCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLK 448
Query: 435 TTSIAKGILLRMISSQC-LTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAI 493
AK L RM+ L+ SY L+ + G V EA
Sbjct: 449 RYDEAKQWLFRMMEGGVKLSTVSY------------------TNLIDVYCKEGNVEEAKR 490
Query: 494 AHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
M + V+P+ YN++I+ +C++G + +A ++ M G P ++ SLIH
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 36/269 (13%)
Query: 61 CEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNE 120
C K M+ A + E+ KGL+P TY ALI G+CKV M A L ++M+ +G++ +
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 121 RTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVAT----------------------- 156
+ +LID C +D+A +++ M GF V T
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459
Query: 157 ------------YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
Y I Y VE+A +F M+ +G+ P+ ++YN +I +C+ G+
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+++A +++A G+ PD TY++LI C+ ++ EA LF EM + ++ TYT
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
++ G+ AF L+DEM+ +G+ D
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Query: 64 ERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY 123
+R +EAK+ + M G+ +Y LI CK N+ A L+ +M +G+ PN TY
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507
Query: 124 MSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
+I C + +A K+ M A+G P TY I ++ V++A+ +FS M
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGL 567
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
+GL + V+Y +IS + G+ ++A + E KG D+ Y+ALI ++
Sbjct: 568 KGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 157/388 (40%), Gaps = 73/388 (18%)
Query: 199 FCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPS 258
+ +G E+ L + V+KG+ D+ + + A + + ++F M+ V +
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 259 NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERV 318
+ T ++ C GE + L E +G P T+N +I+
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGI--------KPEAYTYNTIINAYVKQRDF 275
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
G+L+ M + G+ + V+Y ++ + ++ A +L EM E+ I
Sbjct: 276 SGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIE--------- 326
Query: 379 MEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
SD Y+SL++ +GNM++ F L E+T G P S T G I+G+ K
Sbjct: 327 ----SDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 439 AKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHE-- 496
A+ IL+ + S+ + + + ++++TLI+ + +G+V+EA++ ++
Sbjct: 383 AE-ILMNEMQSKGVNI-TQVVFNTLIDG---------------YCRKGMVDEASMIYDVM 425
Query: 497 ---------------------------------RMHNMSVKPDGAVYNLLIFDHCRRGNV 523
RM VK Y LI +C+ GNV
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 524 NKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
+A ++ EM G P+ + +I+A
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYA 513
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 129/499 (25%), Positives = 216/499 (43%), Gaps = 49/499 (9%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
+T G +R+ +++ I L + ++ A +V EM YN I + +
Sbjct: 3 QTLGAVRL-----AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRE 57
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATY 157
A +Y M+ G S TY I LC D + ++M GF+P + +
Sbjct: 58 SRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAF 117
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
N ++ +V A+ F M +RG PD+VSY +I+ + G++ A+EI +
Sbjct: 118 NVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIR 177
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR-GDVSPSNSTYTRLMYAYCLVGEFS 276
G+ PD+ +AL+ LC + A+++ E ++ V S Y L+ +C G
Sbjct: 178 SGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIE 237
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A L M G PD LVT+N L++ + A G++ M G+ D
Sbjct: 238 KAEALKSYMSKIGCEPD--------LVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLD 289
Query: 337 AVSYNTVLFGFCQIRELKKAYELKV-EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
A SYN +L C++ K Y V EM+ + G D V+YS+L+ +
Sbjct: 290 AYSYNQLLKRHCRVSHPDKCYNFMVKEMEPR--------------GFCDVVSYSTLIETF 335
Query: 396 FAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP 455
N +K ++L EM + G + + VT I ++ +S+AK +L +M ++ P
Sbjct: 336 CRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM--TELGLSP 393
Query: 456 SYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
I Y T++++ C A G+ D I HE + PD YN LI
Sbjct: 394 DRIFYTTILDHLCKSGNVDKAYGVFNDM----------IEHE------ITPDAISYNSLI 437
Query: 515 FDHCRRGNVNKAYEMYKEM 533
CR G V +A +++++M
Sbjct: 438 SGLCRSGRVTEAIKLFEDM 456
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 191/389 (49%), Gaps = 18/389 (4%)
Query: 32 CKEKKVG---ETFGLLRM---EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C+E KVG +TF + EP +VS+ +I L ++ +A E+ M R G++PD
Sbjct: 125 CRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDN 184
Query: 86 ETYNALICGMCKVRNMLCAVELY-DQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFN 143
+ AL+ G+C R + A E+ ++++ + + Y +LI C ++KA + +
Sbjct: 185 KACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKS 244
Query: 144 EMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
M G P + TYN + Y + +++A G+ + M G+ D SYN ++ + C+
Sbjct: 245 YMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVS 304
Query: 204 ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYT 263
+K + +E D V+YS LI+ C + +A+ LF EM + + + TYT
Sbjct: 305 HPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYT 364
Query: 264 RLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALG 323
L+ A+ G S+A L D+M G PD + + ++ LC VD+A G
Sbjct: 365 SLIKAFLREGNSSVAKKLLDQMTELGLSPDRIF--------YTTILDHLCKSGNVDKAYG 416
Query: 324 ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS 383
+ M E ++PDA+SYN+++ G C+ + +A +L +M K DE T++ ++ GL
Sbjct: 417 VFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLI 476
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
S+ + M K F L+R+++
Sbjct: 477 RGKKLSAAYKVW--DQMMDKGFTLDRDVS 503
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 205/433 (47%), Gaps = 29/433 (6%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
ET G + P + +F + LC + ++ A + M ++G PD +Y LI G+ +
Sbjct: 106 ETLGFI---PDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRA 162
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLP-SVAT 156
+ AVE+++ M G+SP+ + +L+ LC +D AY++ E I S + S
Sbjct: 163 GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 157 YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
YN I+ + + R+E+A + S M++ G PDLV+YN +++ + + L++A + AE V
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
GI D +Y+ L++ C + ++ ++ + +Y+ L+ +C
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A+ L +EMR +G + + +VT+ +LI A +L M E+GLSPD
Sbjct: 343 KAYRLFEEMRQKGMVMN--------VVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
+ Y T+L C+ + KAY + +M E I D +Y SL+ GL
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC------------- 441
Query: 397 AQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPS 456
G + + KL +M PD +T I GL + S A + +M+ + T+
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM-DKGFTLDR 500
Query: 457 YIIYDTLIE-NCS 468
+ DTLI+ +CS
Sbjct: 501 -DVSDTLIKASCS 512
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 141/300 (47%), Gaps = 12/300 (4%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N +I GF + K + + + EP LV++ ++ + ++ A+ V+ EM
Sbjct: 224 NALISGFCKAGRIE-KAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 78 RKGLAPDCETYNALICGMCKVRNM-LCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-L 135
R G+ D +YN L+ C+V + C + +M RG + +Y +LI+ C
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNT 341
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
KAY++F EM G + +V TY I A+L A + M E GLSPD + Y +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
+ C+ G ++KA + + +E I PD ++Y++LI LC G + EA LF +M +
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
P T+ ++ + S A+ + D+M +GF D + + LI CS+
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVS--------DTLIKASCSM 513
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 175/430 (40%), Gaps = 78/430 (18%)
Query: 126 LIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
+ +L+ + +D A +VF+EM S + YN+FI + R E A I+ M G
Sbjct: 16 IANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGF 75
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE--A 243
S +Y+ IS C+ V+K L D AL+ + G +P+ A
Sbjct: 76 SLIPFTYSRFISGLCK--------------VKKFDLID-----ALLSDMETLGFIPDIWA 116
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
F+++L++L C + A M RG PD +V
Sbjct: 117 FNVYLDLL------------------CRENKVGFAVQTFFCMVQRGREPD--------VV 150
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
++ LI+GL +V +A+ I M G+SPD + ++ G C R++ AYE+ E
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAE- 209
Query: 364 DEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
+S LS V Y++L++ + G ++K L+ M++ G PD VT
Sbjct: 210 ----------EIKSARVKLS-TVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 424 GVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVG-LVKDF 482
V +N A+G++ M+ S + + +Y L +C +VK+
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSG-IQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEM 317
Query: 483 STRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHM 542
RG D Y+ LI CR N KAY +++EM G ++
Sbjct: 318 EPRGFC-----------------DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNV 360
Query: 543 FSVLSLIHAL 552
+ SLI A
Sbjct: 361 VTYTSLIKAF 370
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 157/313 (50%), Gaps = 13/313 (4%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V+F ++ LC + R+ +A +V M +G P Y +I G+CK+ + A+ L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+M + + Y ++ID LC A +F EM G P V TY+ I ++
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
S R A + M ER ++PD+V+++A+I+ ++G++ +A EI + + +GI P +T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y+++I C Q L +A + M SP T++ L+ YC + EM
Sbjct: 184 YNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 243
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
RG + + VT+ LIHG C + +D A +L M G++P+ +++ ++L
Sbjct: 244 RRGIVAN--------TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLAS 295
Query: 347 FCQIRELKKAYEL 359
C +EL+KA+ +
Sbjct: 296 LCSKKELRKAFAI 308
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 155/308 (50%), Gaps = 13/308 (4%)
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW- 134
M G PD T+ L+ G+C +L A+ L D+M G P Y ++I+ LC
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+ A + ++M + V YN I A +F+ M ++G+ PD+++Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+I FC+ G A ++ + +E+ I PD VT+SALI AL +G + EA +++ +MLR
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
+ P+ TY ++ +C + A + D M + SP +VTF+ LI+G C
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK--------SCSPDVVTFSTLINGYCK 228
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+RVD + I M G+ + V+Y T++ GFCQ+ +L A +L M + + T
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYIT 288
Query: 375 YESLMEGL 382
++S++ L
Sbjct: 289 FQSMLASL 296
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 159/337 (47%), Gaps = 26/337 (7%)
Query: 115 GLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQA 173
G P+ T+ +L++ L C + +A + + M+ G P Y I E A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA 233
L + S M E + +V YNA+I + C+DG A + E +KGI PD +TYS +I +
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 234 LCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
C G +A L +M+ ++P T++ L+ A G+ S A ++ +M RG
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF-- 178
Query: 294 FVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
P+ +T+N++I G C +R+++A +L M SPD V+++T++ G+C+ + +
Sbjct: 179 ------PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Query: 354 KKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
E+ EM + I +++ VTY++L++ + G++ L M
Sbjct: 233 DNGMEIFCEMHRRGI-------------VANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279
Query: 414 NGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQ 450
+G P+ +T + L K A IL + S+
Sbjct: 280 SGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 13/301 (4%)
Query: 32 CKEKKVGETFGLL-RM-EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYN 89
C E +V + L+ RM E + +I LC+ E A ++ +M + YN
Sbjct: 21 CCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYN 80
Query: 90 ALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT--WWLDKAYKVFNEMIA 147
A+I +CK + + A L+ +M +G+ P+ TY +ID C W D A ++ +MI
Sbjct: 81 AIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTD-AEQLLRDMIE 139
Query: 148 SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEK 207
P V T++ I A + +V +A I+ M RG+ P ++YN++I FC+ L
Sbjct: 140 RQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLND 199
Query: 208 ALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
A + K PD VT+S LI C + ++F EM R + + TYT L++
Sbjct: 200 AKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 259
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
+C VG+ A L + M G P++ +TF +++ LCS + + +A IL
Sbjct: 260 GFCQVGDLDAAQDLLNVMISSGVAPNY--------ITFQSMLASLCSKKELRKAFAILED 311
Query: 328 M 328
+
Sbjct: 312 L 312
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 128/243 (52%), Gaps = 1/243 (0%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
++ ++V + +I LC+ A+ + EM+ KG+ PD TY+ +I C+ A
Sbjct: 71 HIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDA 130
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
+L M R ++P+ T+ +LI+ L + +A +++ +M+ G P+ TYN I
Sbjct: 131 EQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG 190
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ +R+ A + +MA + SPD+V+++ +I+ +C+ ++ +EI E +GI+ +
Sbjct: 191 FCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 250
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
VTY+ LI C G L A DL M+ V+P+ T+ ++ + C E AF + +
Sbjct: 251 TVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILE 310
Query: 284 EMR 286
+++
Sbjct: 311 DLQ 313
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 115/208 (55%), Gaps = 1/208 (0%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++++ G+I C R +A++++R+M + + PD T++ALI + K + A E+
Sbjct: 109 PDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI 168
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
Y M RG+ P TY S+ID C L+ A ++ + M + P V T++ I Y
Sbjct: 169 YGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK 228
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
++RV+ + IF M RG+ + V+Y +I FCQ G+L+ A ++ + G+ P+ +T
Sbjct: 229 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYIT 288
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGD 254
+ +++ +LC + L +AF + ++ + +
Sbjct: 289 FQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 143/337 (42%), Gaps = 42/337 (12%)
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
VE G PD VT++ L+ LC +G + +A L M V + Y ++ C +G+
Sbjct: 2 VETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRM----VEEGHQPYGTIINGLCKMGDT 57
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
A +L +M +V +NA+I LC A + M + G+ P
Sbjct: 58 ESALNLLSKMEE--------THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFP 109
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
D ++Y+ ++ FC+ A +L +M E+ I D VT+S+L+N
Sbjct: 110 DVITYSGMIDSFCRSGRWTDAEQLLRDMIERQIN-------------PDVVTFSALINAL 156
Query: 396 FAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP 455
+G + + ++ +M R G P ++T I+G K+ + AK +L M S C P
Sbjct: 157 VKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC--SP 214
Query: 456 SYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIF 515
+ + TLI Y + K ++ F MH + + Y LI
Sbjct: 215 DVVTFSTLIN--GYCKAKRVDNGMEIFC-------------EMHRRGIVANTVTYTTLIH 259
Query: 516 DHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
C+ G+++ A ++ M+ G P+ + S++ +L
Sbjct: 260 GFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL 443
D VT+++L+N +G + + L M G+ P G INGL K T A +L
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 444 LRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSV 503
+M + +IY+ +I+ L KD G A MH+ +
Sbjct: 65 SKMEETH--IKAHVVIYNAIIDR-----------LCKD----GHHIHAQNLFTEMHDKGI 107
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGW 563
PD Y+ +I CR G A ++ ++M+ P + + +LI+AL + K SE
Sbjct: 108 FPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEE 167
Query: 564 VIRNTLR 570
+ + LR
Sbjct: 168 IYGDMLR 174
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 164/347 (47%), Gaps = 15/347 (4%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
V + V+ L +E + +R++ +G PD T+NA + + K +++ ++D
Sbjct: 321 VGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDG 380
Query: 111 MRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
RG+ P Y+ L+ LL + + +M G L SV +YN I + R
Sbjct: 381 FVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARR 440
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
+E A + M +RG+SP+LV++N +S + G+++K + + + G PD +T+S
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSL 500
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
+I LC + +AFD F EML + P+ TY L+ + C G+ + L +M+ G
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG 560
Query: 290 FLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
PD L +NA I C + +V +A +L+ M +GL PD +Y+T++ +
Sbjct: 561 LSPD--------LYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
Query: 350 IRELKKAYELKVEMDEKIIWLDEYTYESLME------GLSDEVTYSS 390
+A E+ ++ D YT + E GLS E +S
Sbjct: 613 SGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGLSRETVSAS 659
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 129/524 (24%), Positives = 222/524 (42%), Gaps = 45/524 (8%)
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
+V +++ G+ P YNA+I + K ++ A + QMR G P+ TY LI +
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 131 CTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
C + D+A ++ +M G P+V TY I +L + RV++AL M R L+P+
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
+ + + KA E+ +EK V Y A++ L S+ + FL
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLS-NNSMAKETGQFLR 344
Query: 250 ML--RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
+ RG + P +ST+ M + + D RG P F +
Sbjct: 345 KIGERGYI-PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFN--------GYLV 395
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
L+ L + +R E L+ M GL SYN V+ C+ R ++ A EM ++
Sbjct: 396 LVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR- 454
Query: 368 IWLDEYTYESLMEGLSDE-VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVF 426
G+S VT+++ L+ Y +G+++KV + ++ +G+ PD +T +
Sbjct: 455 -------------GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLI 501
Query: 427 INGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRG 486
IN L + A M+ + P+ I Y+ LI +C + G
Sbjct: 502 INCLCRAKEIKDAFDCFKEML--EWGIEPNEITYNILIRSCC---------------STG 544
Query: 487 LVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVL 546
+ + +M + PD YN I C+ V KA E+ K M+ G P F+
Sbjct: 545 DTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYS 604
Query: 547 SLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVLNEIEVKK 590
+LI AL + SE + + R + DS +++ E++++K
Sbjct: 605 TLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRK 648
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 124/505 (24%), Positives = 206/505 (40%), Gaps = 43/505 (8%)
Query: 43 LLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNML 102
L M+P + VI L + ++ A ++M G PD TYN LI G+CK +
Sbjct: 173 FLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVD 232
Query: 103 CAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFI 161
A+ L QM G PN TY LID L +D+A K M P+ AT F+
Sbjct: 233 EAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
+A + E+ + V Y+AV+ + ++ + + E+G +
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
PD T++A + L L E +F + V P + Y L+ A FS
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+M G L S+ ++NA+I LC R++ A L M + G+SP+ V++N
Sbjct: 413 LKQMGVDGLL--------SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFN 464
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGN 400
T L G+ ++KK + + EK+ L+ G D +T+S ++N
Sbjct: 465 TFLSGYSVRGDVKKVHGVL----EKL----------LVHGFKPDVITFSLIINCLCRAKE 510
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIY 460
++ F +EM G P+ +T + I T + + +M + P Y
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG--LSPDLYAY 568
Query: 461 DTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
+ I++ C + K A L+K M + +KPD Y+ LI
Sbjct: 569 NATIQSFCKMRKVKKAEELLKT----------------MLRIGLKPDNFTYSTLIKALSE 612
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFS 544
G ++A EM+ + +G P ++
Sbjct: 613 SGRESEAREMFSSIERHGCVPDSYT 637
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/398 (20%), Positives = 153/398 (38%), Gaps = 60/398 (15%)
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
+ G L ++E+ E + G D LI + G D+F ++ + PS
Sbjct: 122 RKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTR 181
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
Y ++ A +A+ +MR G PD T+N LIHG+C VDE
Sbjct: 182 LYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPD--------RFTYNILIHGVCKKGVVDE 233
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
A+ +++ M + G P+ +Y ++ GF + +A + M + + +E T + +
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 381 G----LSDEVTYSSLLNDYFAQGNMQKV------------------FKLEREMTRNGYLP 418
G L + L+ N+Q+V + R++ GY+P
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 419 DSVT----LGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVE-FK 473
DS T + + G + T I G + R + P + Y L++ + F
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVK------PGFNGYLVLVQALLNAQRFS 407
Query: 474 SAVGLVKDFSTRGL-------------------VNEAAIAHERMHNMSVKPDGAVYNLLI 514
+K GL + AA+ M + + P+ +N +
Sbjct: 408 EGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFL 467
Query: 515 FDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
+ RG+V K + + ++++ +GF P + + +I+ L
Sbjct: 468 SGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCL 505
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 13 HMVRMNVMIRGFATESVMS-------CKEKKVGETFGLLR------MEPYLVSFKGVIKE 59
H V +++ GF + + C+ K++ + F + +EP +++ +I+
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
Query: 60 LCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPN 119
C + + ++ +M GL+PD YNA I CK+R + A EL M GL P+
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599
Query: 120 ERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVAT 156
TY +LI L + +A ++F+ + G +P T
Sbjct: 600 NFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 137/570 (24%), Positives = 244/570 (42%), Gaps = 76/570 (13%)
Query: 46 MEPYLVSFKG-VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
+EP VS G V+ L K + +A + R + +G + N ++ G+ V + A
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVA 270
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
L + G +PN T+ +LI+ C +D+A+ +F M G P + Y+ I
Sbjct: 271 SRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDG 330
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
Y + + +FS +G+ D+V +++ I + + G+L A + + +GI P+
Sbjct: 331 YFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPN 390
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
VTY+ LI+ LC G + EAF ++ ++L+ + PS TY+ L+ +C G F L++
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450
Query: 284 EMRHRGFLPDFVI------------------QFSP---------SLVTFNALIHGLCSLE 316
+M G+ PD VI +FS ++V FN+LI G C L
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLF------GFCQIRELKKAYELKVEMDEKIIWL 370
R DEAL + R M G+ PD ++ TV+ FC+ + +L M I
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISA 570
Query: 371 D--------------------EYTYESLMEGL--SDEVTYSSLLNDYFAQGNMQKVFKLE 408
D + +L+EG D VTY++++ Y + + + ++
Sbjct: 571 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 630
Query: 409 REMTRNGYLPDSVTLGVFINGLNKK------------------ATTSIAKGILLRMISSQ 450
+ + P++VTL + I+ L K ++ G L+ S
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690
Query: 451 CLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVY 510
S+ +++ + E S ++ RG V+EA + + + PD Y
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 750
Query: 511 NLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
+LI +C+ G + +A +Y+ M+ G P
Sbjct: 751 AILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 176/405 (43%), Gaps = 37/405 (9%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +V++ +IK LC+ R+ EA + ++ ++G+ P TY++LI G CK N+
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIASGFLPSVATYNKFITAY 164
LY+ M G P+ Y L+D L L A + +M+ +V +N I +
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVI------SKFCQDGELEKALEIKAETVEK 218
R ++AL +F M G+ PD+ ++ V+ FC+ + L++
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRN 566
Query: 219 GILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMA 278
I D + +I L + +A F ++ G + P TY ++ YC + A
Sbjct: 567 KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEA 626
Query: 279 FHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAV 338
+ + ++ V F P+ VT LIH LC +D A+ + M E G P+AV
Sbjct: 627 ERIFELLK--------VTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 339 SYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG----------------- 381
+Y ++ F + +++ +++L EM EK I +Y +++G
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 382 -----LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
L D V Y+ L+ Y G + + L M RNG PD +
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 172/416 (41%), Gaps = 63/416 (15%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERM 66
++V ++I+G C++ ++ E FG+ MEP +V++ +I C+ +
Sbjct: 390 NVVTYTILIKGL-------CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
+ +M + G PD Y L+ G+ K ML A+ +M + + N + SL
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 127 IDLLCTW-WLDKAYKVFNEMIASGFLPSVATY---------------------------- 157
ID C D+A KVF M G P VAT+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 158 -------------NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
N I R+E A F+ + E + PD+V+YN +I +C
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L++A I P+ VT + LI LC + A +F M P+ TY
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
LM + + +F L +EM+ +G SPS+V+++ +I GLC RVDEA I
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGI--------SPSIVSYSIIIDGLCKRGRVDEATNI 734
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
+ L PD V+Y ++ G+C++ L +A L M + D+ +L E
Sbjct: 735 FHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 790
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 149/349 (42%), Gaps = 60/349 (17%)
Query: 4 LRATLKSFRHMVRMN---------VMIRGFATESVM----SCKEKKVGETFGLLRMEPYL 50
LR+ + M++M V++ G + + +M K +G++ L +
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL-----NV 496
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALI------CGMCKVRNMLCA 104
V F +I C R +EA +V R M G+ PD T+ ++ CK
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIG 556
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
++L+D M+ +S + +I LL ++ A K FN +I P + TYN I
Sbjct: 557 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 616
Query: 164 YLSSERVEQA-----------------------------------LGIFSAMAERGLSPD 188
Y S R+++A + +FS MAE+G P+
Sbjct: 617 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPN 676
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
V+Y ++ F + ++E + ++ E EKGI P V+YS +I LC +G + EA ++F
Sbjct: 677 AVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFH 736
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQ 297
+ + + P Y L+ YC VG A L++ M G PD ++Q
Sbjct: 737 QAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQ 785
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 206/481 (42%), Gaps = 81/481 (16%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
A++ + + G P+ T + L+ D A KVF+EMI +
Sbjct: 86 ALKYFRWAEISGKDPSFYTIAHV--LIRNGMFDVADKVFDEMITNR-------------- 129
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG-ILP 222
+ + ++ +R L D+ + ++ C+ G ++KALEI + + G ++P
Sbjct: 130 -------GKDFNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIP 180
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN-STYTRLMYAYCLVGEFSMAFHL 281
D Y ++ +L + D F ++ RG + PS S + ++ A GE + A
Sbjct: 181 QDSVYR-MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDF 239
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
H + RG F +V+ N ++ GL S+++++ A +L + + G +P+ V++
Sbjct: 240 HRLVMERG--------FRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS------------------ 383
T++ GFC+ E+ +A++L M+++ I D Y +L++G
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 384 ----DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIA 439
D V +SS ++ Y G++ + + M G P+ VT + I GL + A
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 440 KGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKD----------------- 481
G+ +++ PS + Y +LI+ C +S L +D
Sbjct: 411 FGMYGQILKRG--MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 482 --FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFF 539
S +GL+ A +M S++ + V+N LI CR ++A ++++ M YG
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 540 P 540
P
Sbjct: 529 P 529
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +VS+ +I LC++ R++EA + + L PD Y LI G CKV ++ A
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWL 135
LY+ M G+ P++ +L + WL
Sbjct: 768 LLYEHMLRNGVKPDDLLQRALSEYNPPKWL 797
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 147/584 (25%), Positives = 263/584 (45%), Gaps = 49/584 (8%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N +IR + + + K+ +T + + P +++F ++ L ++ R A ++ EM
Sbjct: 142 NSLIRSYGNAGLFQ-ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 78 RK-GLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLD 136
R G+ PD T+N LI G CK + A ++ M + +P+ TY ++ID LC
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 137 K-AYKVFNEMI--ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
K A+ V + M+ A+ P+V +Y + Y + +++A+ +F M RGL P+ V+YN
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 194 AVISKFCQDGELE--KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
+I + + K + I PD T++ LI+A C G L A +F EML
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL--PDFVIQFSPSLVTFNALI 309
+ P +++Y+ L+ C+ EF A L +E+ + L D + P +N +
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKD---ECKPLAAAYNPMF 437
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
LC+ + +A + R + + G+ D SY T++ G C+ + K AYEL V M +
Sbjct: 438 EYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFV 496
Query: 370 LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
D TYE L++GL + A +Q+ M R+ YLP + T +
Sbjct: 497 PDLETYELLIDGLL------KIGEALLAHDTLQR-------MLRSSYLPVATTFHSVLAE 543
Query: 430 LNKK---------ATTSIAKGI---------LLRMISSQCLTMPSYIIYDTLIENCSYVE 471
L K+ T + K I ++R++ S +++I L +N V+
Sbjct: 544 LAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVK 603
Query: 472 FKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYK 531
+ +G + + R L++ + + S D N +I C+ ++A+ +Y
Sbjct: 604 MEELLGYLCE--NRKLLDAHTLVLFCLEK-SQMVDIDTCNTVIEGLCKHKRHSEAFSLYN 660
Query: 532 EMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRN--TLRSCN 573
E+V G + + L +AL K E+ +V + TLR +
Sbjct: 661 ELVELGNHQQLSCHVVLRNALEAAGKWEELQFVSKRMATLRESD 704
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/507 (22%), Positives = 213/507 (42%), Gaps = 62/507 (12%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVAT------- 156
+ +D + +G S E+++ +++ L + N +A FL S+
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFLMLEFLG--------RARNLNVARNFLFSIERRSNGCVK 135
Query: 157 -----YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI 211
+N I +Y ++ ++++ +F M + G+SP ++++N+++S + G A ++
Sbjct: 136 LQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDL 195
Query: 212 KAETVEK-GILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
E G+ PD T++ LI C + EAF +F +M +P TY ++ C
Sbjct: 196 FDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLC 255
Query: 271 LVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPE 330
G+ +A ++ M + P++V++ L+ G C + +DEA+ + M
Sbjct: 256 RAGKVKIAHNVLSGMLKKA------TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLS 309
Query: 331 MGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSS 390
GL P+AV+YNT++ G + E + E+K D I D +T + D T++
Sbjct: 310 RGLKPNAVTYNTLIKG---LSEAHRYDEIK---DILIGGNDAFTTFA-----PDACTFNI 358
Query: 391 LLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQ 450
L+ + G++ K+ +EM PDS + V I L + A+ + + +
Sbjct: 359 LIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKE 418
Query: 451 CL-----TMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVK 504
L P Y+ + E C+ + K A + + RG+
Sbjct: 419 VLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV----------------- 461
Query: 505 PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWV 564
D Y LI HCR G AYE+ M+ F P + + LI L +
Sbjct: 462 QDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDT 521
Query: 565 IRNTLRSCNLN-DSELHQVLNEIEVKK 590
++ LRS L + H VL E+ +K
Sbjct: 522 LQRMLRSSYLPVATTFHSVLAELAKRK 548
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 151/630 (23%), Positives = 253/630 (40%), Gaps = 130/630 (20%)
Query: 17 MNVMIRGFATESVMSCKEKKVGETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEVV 73
+NV+I F CK ++ LLR + V++ VI LCE +EA + +
Sbjct: 132 LNVLIHSF-------CKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFL 184
Query: 74 REMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ----------------------- 110
EM + G+ PD +YN LI G CKV N + A L D+
Sbjct: 185 SEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIE 244
Query: 111 -----MRVRGLSPNERTYMSLIDLLCTWWLDKAYKV------FNEMIASGFLPSVATYNK 159
M + G P+ T+ S+I+ LC K KV EM P+ TY
Sbjct: 245 EAYRDMVMSGFDPDVVTFSSIINRLC-----KGGKVLEGGLLLREMEEMSVYPNHVTYTT 299
Query: 160 FITAYLSSERVEQALGIFSAMAERGLS--------------------------------- 186
+ + + AL ++S M RG+
Sbjct: 300 LVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 359
Query: 187 --PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
P++V+Y A++ C+ G+L A I + +EK ++P+ VTYS++I +G L EA
Sbjct: 360 QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV 419
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
L +M +V P+ TY ++ G+ MA L EMR G + I
Sbjct: 420 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI-------- 471
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+AL++ L + R+ E G+++ M G++ D ++Y +++ F + + + A EM
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 365 EKIIWLDEYTYESLMEGL---------------------SDEVTYSSLLNDYFAQGNMQK 403
E+ + D +Y L+ G+ D T++ ++N QG+ +
Sbjct: 532 ERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEG 591
Query: 404 VFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTL 463
+ KL +M G P ++ + + L + A IL +M+ + P+ Y
Sbjct: 592 ILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLME--IHPNLTTYRIF 649
Query: 464 IENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNV 523
++ S + K A + K HE + + +K VYN LI C+ G
Sbjct: 650 LDTSS--KHKRADAIFK-------------THETLLSYGIKLSRQVYNTLIATLCKLGMT 694
Query: 524 NKAYEMYKEMVHYGFFPHMFSVLSLIHALY 553
KA + +M GF P + SL+H +
Sbjct: 695 KKAAMVMGDMEARGFIPDTVTFNSLMHGYF 724
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 135/529 (25%), Positives = 235/529 (44%), Gaps = 87/529 (16%)
Query: 27 ESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCE 86
E+ +S +++ ++ Y+ F + + ER+ A + M G+ PD
Sbjct: 35 ETSLSITQRRFDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSR 94
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMI 146
+N+LI Q V GL D+ ++++MI
Sbjct: 95 LWNSLI----------------HQFNVNGLVH-----------------DQVSLIYSKMI 121
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE 206
A G P V N I ++ R+ A+ S + R +S D V+YN VIS C+ G +
Sbjct: 122 ACGVSPDVFALNVLIHSFCKVGRLSFAI---SLLRNRVISIDTVTYNTVISGLCEHGLAD 178
Query: 207 KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN-STYTRL 265
+A + +E V+ GILPD V+Y+ LI C G+ A + L ++S N T+T L
Sbjct: 179 EAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA-----KALVDEISELNLITHTIL 233
Query: 266 MYAYCLVGEFSMAFHLHD-EMRHRGFLPDFVIQ-FSPSLVTFNALIHGLCSLERVDEALG 323
+ +Y ++LH E +R D V+ F P +VTF+++I+ LC +V E
Sbjct: 234 LSSY---------YNLHAIEEAYR----DMVMSGFDPDVVTFSSIINRLCKGGKVLEGGL 280
Query: 324 ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS 383
+LR M EM + P+ V+Y T++ + + A L +M + I +D Y LM+GL
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL- 339
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL 443
F G++++ K + + + +P+ VT ++GL K S A+ I+
Sbjct: 340 ------------FKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII 387
Query: 444 LRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSV 503
+M+ + P+ + Y ++I G VK +G++ EA +M + +V
Sbjct: 388 TQMLEKSVI--PNVVTYSSMIN-----------GYVK----KGMLEEAVSLLRKMEDQNV 430
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
P+G Y +I + G A E+ KEM G + + + +L++ L
Sbjct: 431 VPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL 479
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 148/302 (49%), Gaps = 18/302 (5%)
Query: 24 FATESVMSCKEKKVGETFGLLRM---------EPYLVSFKGVIKELCEKERMEEAKEVVR 74
AT ++M ++K G++ G+L++ +P L+S V+ LCE +MEEA ++
Sbjct: 573 IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILN 632
Query: 75 EMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW 134
+M + P+ TY + K + + ++ + G+ + + Y +LI LC
Sbjct: 633 QMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 692
Query: 135 L-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
+ KA V +M A GF+P T+N + Y V +AL +S M E G+SP++ +YN
Sbjct: 693 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 752
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+I G +++ + +E +G+ PDD TY+ALI G++ + ++ EM+
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIAD 812
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
+ P STY L+ + VG+ A L EM RG SP+ T+ +I GLC
Sbjct: 813 GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRG--------VSPNTSTYCTMISGLC 864
Query: 314 SL 315
L
Sbjct: 865 KL 866
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 216/490 (44%), Gaps = 50/490 (10%)
Query: 3 LLRATLKSFRHMVRMNVMIRGFATESVM-----SCKEK---KVGETFGLLRMEPYLVSFK 54
+L + R M NV+ GF +V+ + KE+ ++ + L+ +E
Sbjct: 414 MLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILD 473
Query: 55 GVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVR 114
++ L R++E K +V++M KG+ D Y +LI K + A+ ++M+ R
Sbjct: 474 ALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQER 533
Query: 115 GLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
G+ + +Y LI + + A + M G P +AT+N + + E L
Sbjct: 534 GMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGIL 593
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
++ M G+ P L+S N V+ C++G++E+A+ I + + I P+ TY +
Sbjct: 594 KLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS 653
Query: 235 CLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDF 294
F +L + S Y L+ C +G A + +M RGF+PD
Sbjct: 654 SKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD- 712
Query: 295 VIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELK 354
VTFN+L+HG V +AL M E G+SP+ +YNT++ G +K
Sbjct: 713 -------TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIK 765
Query: 355 KAYELKVEMDEKIIWLDEYTYESLMEG-----------------LSDEV-----TYSSLL 392
+ + EM + + D++TY +L+ G ++D + TY+ L+
Sbjct: 766 EVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLI 825
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL-----------NKKAT-TSIAK 440
+++ G M + +L +EM + G P++ T I+GL NKKA + AK
Sbjct: 826 SEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAK 885
Query: 441 GILLRMISSQ 450
G+L M+ +
Sbjct: 886 GLLKEMVEEK 895
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 133/582 (22%), Positives = 237/582 (40%), Gaps = 109/582 (18%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P +V+F +I LC+ ++ E ++REM + P+ TY L+ + K A+
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 107 LYDQMRVRGLS-----------------------------------PNERTYMSLIDLLC 131
LY QM VRG+ PN TY +L+D LC
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 132 TWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
L A + +M+ +P+V TY+ I Y+ +E+A+ + M ++ + P+
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+Y VI + G+ E A+E+ E G+ ++ AL+ L G + E L +M
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV---------IQFS-- 299
+ V+ YT L+ + G+ A +EM+ RG D V ++F
Sbjct: 496 VSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV 555
Query: 300 ---------------PSLVTFNALIHGLCSLERVDEALGILR---GMPEMGLSPDAVSYN 341
P + TFN +++ S + ++ GIL+ M G+ P +S N
Sbjct: 556 GADWAYKGMREKGIEPDIATFNIMMN---SQRKQGDSEGILKLWDKMKSCGIKPSLMSCN 612
Query: 342 TVLFGFCQIRELKKAY---------ELKVEMDEKIIWLDEY-----------TYESLME- 380
V+ C+ ++++A E+ + I+LD T+E+L+
Sbjct: 613 IVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSY 672
Query: 381 --GLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
LS +V Y++L+ G +K + +M G++PD+VT ++G + +
Sbjct: 673 GIKLSRQV-YNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYF--VGSHV 729
Query: 439 AKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERM 498
K + + + P+ Y+T+I + S GL+ E M
Sbjct: 730 RKALSTYSVMMEAGISPNVATYNTII---------------RGLSDAGLIKEVDKWLSEM 774
Query: 499 HNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
+ ++PD YN LI + GN+ + +Y EM+ G P
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVP 816
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 227/529 (42%), Gaps = 52/529 (9%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+E LV++ ++ + E A E R + Y +I C+ NM A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWLD--KAYKVFNEMIASGFLPSVATYNKFITA 163
L +M G+ Y +++D T D K VF + GF P+V TY I
Sbjct: 435 ALVREMEEEGIDAPIAIYHTMMDGY-TMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
Y ++ +AL + M E G+ +L +Y+ +I+ F + + A + + V++G+ PD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+ Y+ +I A C G++ A EM + P+ T+ +++ Y G+ + + D
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
MR G + P++ TFN LI+GL ++++A+ IL M G+S + +Y +
Sbjct: 614 MMRRCGCV--------PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQK 403
+ G+ + + KA+E + + + +D +TYE+L++ G MQ
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK-------------SGRMQS 712
Query: 404 VFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTL 463
+ +EM+ +S + I+G ++ A ++ +M P Y +
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV--KPDIHTYTSF 770
Query: 464 IENCS----------YVEFKSAVG----------LVKDFSTRGLVNEAAIAHERMHNMSV 503
I CS +E A+G L+K ++ L +A +E M M +
Sbjct: 771 ISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGI 830
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAY------EMYKEMVHYGFFPHMFSVL 546
KPD AVY+ L+ R ++ +AY + KEMV G M + +
Sbjct: 831 KPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAV 879
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 222/518 (42%), Gaps = 48/518 (9%)
Query: 39 ETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGM 95
ETF +R + P + +I M+EA VR+M +G+ TY+ ++ G
Sbjct: 330 ETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGF 389
Query: 96 CKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSV 154
K + A +D+ + + N Y +I C T +++A + EM G +
Sbjct: 390 SKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPI 449
Query: 155 ATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
A Y+ + Y ++ L +F + E G +P +V+Y +I+ + + G++ KALE+
Sbjct: 450 AIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV 509
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
E+G+ + TYS +I AF +F +M++ + P Y ++ A+C +G
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 275 FSMAFHLHDEM---RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM 331
A EM RHR P+ TF +IHG + +L + M
Sbjct: 570 MDRAIQTVKEMQKLRHR-----------PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRC 618
Query: 332 GLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSL 391
G P ++N ++ G + R+++KA E+ EM + +E+TY +M+G
Sbjct: 619 GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG---------- 668
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC 451
Y + G+ K F+ + G D T + K A + M S++
Sbjct: 669 ---YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEM-SARN 724
Query: 452 LTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
+ S++ Y+ LI+ ++ RG V EAA ++M VKPD Y
Sbjct: 725 IPRNSFV-YNILIDG---------------WARRGDVWEAADLIQQMKKEGVKPDIHTYT 768
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
I + G++N+A + +EM G P++ + +LI
Sbjct: 769 SFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 182/470 (38%), Gaps = 74/470 (15%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+ +A + F M A G P+ Y I AY +++AL M E G+ LV+Y+
Sbjct: 325 MHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSV 384
Query: 195 VISKF-----------------------------------CQDGELEKALEIKAETVEKG 219
++ F CQ +E+A + E E+G
Sbjct: 385 IVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEG 444
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
I Y ++ + + +F + +P+ TY L+ Y VG+ S A
Sbjct: 445 IDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKAL 504
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
+ M+ G +L T++ +I+G L+ A + M + G+ PD +
Sbjct: 505 EVSRVMKEEG--------VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVIL 556
Query: 340 YNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQG 399
YN ++ FC + + +A + EM + + T+ +++ Y G
Sbjct: 557 YNNIISAFCGMGNMDRAIQTVKEMQK-------------LRHRPTTRTFMPIIHGYAKSG 603
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM----ISSQCLT-- 453
+M++ ++ M R G +P T INGL +K A IL M +S+ T
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 454 --MPSYII---------YDTLIENCSY-VEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM 501
M Y Y T ++N V+ + L+K G + A + M
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
++ + VYN+LI RRG+V +A ++ ++M G P + + S I A
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 145/371 (39%), Gaps = 57/371 (15%)
Query: 182 ERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLP 241
+R L + ++ AVIS F EK P + +++ +G +
Sbjct: 284 QRILDTNGDNWQAVISAF-----------------EKISKPSRTEFGLMVKFYGRRGDMH 326
Query: 242 EAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
A + F M ++P++ YT L++AY + + A +M+ G S
Sbjct: 327 RARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGI--------EMS 378
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
LVT++ ++ G + A + + +A Y +++ CQ +++A L
Sbjct: 379 LVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVR 438
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVT-YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDS 420
EM+E EG+ + Y ++++ Y + +K + + + G+ P
Sbjct: 439 EMEE--------------EGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 421 VTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVK 480
VT G IN K I+K + + + + + Y +I G VK
Sbjct: 485 VTYGCLINLYTK--VGKISKALEVSRVMKEEGVKHNLKTYSMMIN-----------GFVK 531
Query: 481 DFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
+ N A+ E M +KPD +YN +I C GN+++A + KEM P
Sbjct: 532 ---LKDWANAFAV-FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 541 HMFSVLSLIHA 551
+ + +IH
Sbjct: 588 TTRTFMPIIHG 598
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 169/375 (45%), Gaps = 48/375 (12%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P L++ ++ LC+ +E+A +VREM G +P+C +YN LI G+C V N+ A+ L
Sbjct: 154 PGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYL 213
Query: 108 YDQMRVRGLSPNERTYMSLID-------------------------------LLCTWWLD 136
++ M G+ PN T ++ ++CT +D
Sbjct: 214 FNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMD 273
Query: 137 KAYK---------VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
+K V+ EM YN I SS + A G M +RG++P
Sbjct: 274 SCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNP 333
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D+ +YN +IS C++G+ ++A ++ G+ PD ++Y +IQ LC+ G + A +
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
L ML+ + P + ++ Y G+ S A + + M G P++ T NA
Sbjct: 394 LSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYG--------VKPNVYTNNA 445
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
LIHG R+ +A + M + PD +YN +L C + L+ A++L EM +
Sbjct: 446 LIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRG 505
Query: 368 IWLDEYTYESLMEGL 382
D TY L+ GL
Sbjct: 506 CQPDIITYTELVRGL 520
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 187/431 (43%), Gaps = 61/431 (14%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
++++LC + +++ A + ++M G+ P T+N L+ G+CK + A L +MR G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 116 LSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYN---------------- 158
SPN +Y +LI LC+ +DKA +FN M G P+ T N
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 159 -KFITAYLSSER----------------------VEQALGIFSAMAERGLSPDLVSYNAV 195
K + L S + V QAL ++ M+++ + D V YN +
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
I C G + A + V++G+ PD TY+ LI ALC +G EA DL M G V
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
+P +Y ++ C+ G+ + A M LP+ ++ +N +I G
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLL--------WNVVIDGYGRY 418
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
AL +L M G+ P+ + N ++ G+ + L A+ +K EM I
Sbjct: 419 GDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIH------ 472
Query: 376 ESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT 435
D TY+ LL G+++ F+L EM R G PD +T + GL K
Sbjct: 473 -------PDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGR 525
Query: 436 TSIAKGILLRM 446
A+ +L R+
Sbjct: 526 LKKAESLLSRI 536
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 190/425 (44%), Gaps = 44/425 (10%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
LD A + +MI SG +P + T+N + + +E+A G+ M E G SP+ VSYN
Sbjct: 137 LDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNT 196
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+I C ++KAL + + GI P+ VT + ++ ALC +G + LE + D
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL-D 255
Query: 255 VSPSNSTY-----TRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
S +N+ T LM + G A + EM + D V+ +N +I
Sbjct: 256 SSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV--------YNVII 307
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
GLCS + A G + M + G++PD +YNT++ C+ + +A +L M +
Sbjct: 308 RGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVA 367
Query: 370 LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
D+ +Y+ +++GL G++ + + M ++ LP+ + V I+G
Sbjct: 368 PDQISYKVIIQGLC-------------IHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDG 414
Query: 430 LNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVN 489
+ TS A +L M+S P+ + LI G VK G +
Sbjct: 415 YGRYGDTSSALSVLNLMLSYG--VKPNVYTNNALIH-----------GYVKG----GRLI 457
Query: 490 EAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
+A M + + PD YNLL+ C G++ A+++Y EM+ G P + + L+
Sbjct: 458 DAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELV 517
Query: 550 HALYY 554
L +
Sbjct: 518 RGLCW 522
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 160/347 (46%), Gaps = 12/347 (3%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETF--GLLRMEPYLVSFKGVIKELCEKE-RMEEAKE 71
V N+++ + V+ KK+ E P + ++ + C K + +A E
Sbjct: 227 VTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALE 286
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
V +EM++K + D YN +I G+C NM+ A M RG++P+ TY +LI LC
Sbjct: 287 VWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALC 346
Query: 132 T-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
D+A + M G P +Y I V +A +M + L P+++
Sbjct: 347 KEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVL 406
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+N VI + + G+ AL + + G+ P+ T +ALI G L +A+ + EM
Sbjct: 407 LWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM 466
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIH 310
+ P +TY L+ A C +G +AF L+DEM RG PD ++T+ L+
Sbjct: 467 RSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPD--------IITYTELVR 518
Query: 311 GLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
GLC R+ +A +L + G++ D V + + + +++ +AY
Sbjct: 519 GLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAY 565
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 160/365 (43%), Gaps = 40/365 (10%)
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+S++++ LCLQG L A L +M+ V P T+ L+ C G A L EMR
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
G P SP+ V++N LI GLCS+ VD+AL + M + G+ P+ V+ N ++
Sbjct: 184 EMG--P------SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHA 235
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK 406
CQ + ++K+ L+E S D V + L++ F GN+ + +
Sbjct: 236 LCQKGVIGNN-------NKKL--LEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALE 286
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
+ +EM++ DSV V I GL A G + M+ P Y+TLI
Sbjct: 287 VWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG--VNPDVFTYNTLISA 344
Query: 467 -CSYVEFKSAVGL-------------------VKDFSTRGLVNEAAIAHERMHNMSVKPD 506
C +F A L ++ G VN A M S+ P+
Sbjct: 345 LCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPE 404
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIR 566
++N++I + R G+ + A + M+ YG P++++ +LIH Y W ++
Sbjct: 405 VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG-YVKGGRLIDAWWVK 463
Query: 567 NTLRS 571
N +RS
Sbjct: 464 NEMRS 468
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 207/477 (43%), Gaps = 53/477 (11%)
Query: 84 DC-ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKV 141
DC +++++ +C + A+ L +M G+ P T+ L++ LC +++KA +
Sbjct: 119 DCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGL 178
Query: 142 FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
EM G P+ +YN I S V++AL +F+ M + G+ P+ V+ N ++ CQ
Sbjct: 179 VREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQ 238
Query: 202 DGEL----EKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
G + +K LE ++ + D V + L+ + G++ +A +++ EM + +V
Sbjct: 239 KGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPA 298
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
+ Y ++ C G A+ +M RG PD + T+N LI LC +
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD--------VFTYNTLISALCKEGK 350
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM------DEKIIW-- 369
DEA + M G++PD +SY ++ G C ++ +A E + M E ++W
Sbjct: 351 FDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNV 410
Query: 370 -LDEYT-YESLMEGLS------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
+D Y Y LS + T ++L++ Y G + + ++ EM
Sbjct: 411 VIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTK 470
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSA 475
PD+ T + + A ++ LR+ ++ +YD ++ + +
Sbjct: 471 IHPDTTTYNLLLG-----AACTLGH---LRL---------AFQLYDEMLRRGCQPDIITY 513
Query: 476 VGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
LV+ +G + +A R+ + D + +L + R +AY +YK+
Sbjct: 514 TELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLVYKK 570
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 116/265 (43%), Gaps = 30/265 (11%)
Query: 298 FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
+ L ++++ LC ++D AL + + M G+ P +++N +L G C+ ++KA
Sbjct: 117 YDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKAD 176
Query: 358 ELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
L EM E M + V+Y++L+ + N+ K L M + G
Sbjct: 177 GLVREMRE-------------MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIR 223
Query: 418 PDSVTLGVFINGLNKKATTSIAKGILLRMI--SSQCLTMPSYIIYDTLIENCSYVEFKSA 475
P+ VT + ++ L +K LL I SSQ +I L+++C FK+
Sbjct: 224 PNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSC----FKN- 278
Query: 476 VGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVH 535
G V +A + M +V D VYN++I C GN+ AY +MV
Sbjct: 279 ----------GNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK 328
Query: 536 YGFFPHMFSVLSLIHALYYDRKNSE 560
G P +F+ +LI AL + K E
Sbjct: 329 RGVNPDVFTYNTLISALCKEGKFDE 353
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 25/264 (9%)
Query: 14 MVRMNVMIRGFATESVMS--CKEKKVGET---FGLLR---MEPYLVSFKGVIKELCEKER 65
MV+ V F +++S CKE K E G ++ + P +S+K +I+ LC
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGD 385
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
+ A E + M + L P+ +N +I G + + A+ + + M G+ PN T +
Sbjct: 386 VNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNA 445
Query: 126 LID-------LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
LI L+ WW V NEM ++ P TYN + A + + A ++
Sbjct: 446 LIHGYVKGGRLIDAWW------VKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYD 499
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
M RG PD+++Y ++ C G L+KA + + GI D V + L +
Sbjct: 500 EMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQ 559
Query: 239 SLPEAFDLFLEML----RGDVSPS 258
EA+ ++ + L RG PS
Sbjct: 560 RPGEAYLVYKKWLATRNRGVSCPS 583
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 169/379 (44%), Gaps = 48/379 (12%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L +P L++F +I LC+K +++A E++ EM R G P+ T+ ALI G+CK
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 104 AVELYDQM-RVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFI 161
A L+ ++ R PN TY S+I C L++A +F+ M G P+V TY I
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
+ + +A + + M + G P++ +YNA I C+ +A E+ + G+
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE 460
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEM----LRGDVS--------------------- 256
D VTY+ LIQ C Q + +A F M D+
Sbjct: 461 ADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERL 520
Query: 257 ----------PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
P+ TYT ++ YC G+ +A M+ G +PD T+
Sbjct: 521 FQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS--------FTYG 572
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
+LI GLC VDEA + M + GLSP V+ T+ + +C+ + A L +D+K
Sbjct: 573 SLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
Query: 367 IIWLDEYTYESLMEGLSDE 385
+W+ T +L+ L E
Sbjct: 633 -LWIR--TVRTLVRKLCSE 648
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 208/452 (46%), Gaps = 22/452 (4%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
++ LCE + A R+M G P+ + +LI G+CK ++ A E+ ++M G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 116 LSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASG-FLPSVATYNKFITAYLSSERVEQA 173
PN T+ +LID LC W +KA+++F +++ S + P+V TY I Y +++ +A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA 233
+FS M E+GL P++ +Y +I+ C+ G +A E+ ++G +P+ TY+A I +
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 234 LCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
LC + PEA++L + + TYT L+ C + + A M GF D
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEAD 497
Query: 294 FVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
+ N LI C +++ E+ + + + +GL P +Y +++ +C+ ++
Sbjct: 498 MRLN--------NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549
Query: 354 KKAYELKVEMDEKIIWLDEYTYESLMEGLS-----DEVT--YSSLLNDYFAQGNMQKVFK 406
A + M D +TY SL+ GL DE Y ++++ + + +V
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
RN DS + + L+KK + ++ ++ S + + + + + + L+E
Sbjct: 610 AYEYCKRN----DSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAA-LFFQKLLEK 664
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERM 498
S + + S G N ER+
Sbjct: 665 DSSADRVTLAAFTTACSESGKNNLVTDLTERI 696
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 219/485 (45%), Gaps = 48/485 (9%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFIT 162
AV + M+ +GL+P+ T ++++ L + A VF+EM G +P ++Y +
Sbjct: 166 AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVI 225
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
++++A + M +RG PD + +++ C++G + +A+ + ++ G P
Sbjct: 226 GCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKP 285
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ + +++LI LC +GS+ +AF++ EM+R P+ T+T L+ C G AF L
Sbjct: 286 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
++ + P++ T+ ++I G C ++++ A + M E GL P+ +Y T
Sbjct: 346 LKLVRSD-------TYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTT 398
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL-------------------- 382
++ G C+ +AYEL M ++ + YTY + ++ L
Sbjct: 399 LINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCG 458
Query: 383 --SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAK 440
+D VTY+ L+ + Q ++ + M + G+ D + I ++ ++
Sbjct: 459 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 518
Query: 441 GILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHN 500
L +++ S L +P+ Y ++I +C + G ++ A M
Sbjct: 519 R-LFQLVVSLGL-IPTKETYTSMI-SC--------------YCKEGDIDLALKYFHNMKR 561
Query: 501 MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSE 560
PD Y LI C++ V++A ++Y+ M+ G P + ++L + Y R +S
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYE-YCKRNDSA 620
Query: 561 MGWVI 565
++
Sbjct: 621 NAMIL 625
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 105/261 (40%), Gaps = 39/261 (14%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK+ + E + LL +E V++ +I+E C++ + +A MN+ G D
Sbjct: 439 CKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADM 498
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNE 144
N LI C+ + M + L+ + GL P + TY S+I C +D A K F+
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV-------------- 190
M G +P TY I+ V++A ++ AM +RGLSP V
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 618
Query: 191 SYNAVI------------------SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
S NA+I K C + ++ A + +EK D VT +A
Sbjct: 619 SANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTT 678
Query: 233 ALCLQGSLPEAFDLFLEMLRG 253
A G DL + RG
Sbjct: 679 ACSESGKNNLVTDLTERISRG 699
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRME------PYLVSFKGVIKELCEKERMEEAKE 71
N++I F C++KK+ E+ L ++ P ++ +I C++ ++ A +
Sbjct: 502 NILIAAF-------CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALK 554
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
M R G PD TY +LI G+CK + A +LY+ M RGLSP E T ++L C
Sbjct: 555 YFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 614
Query: 132 TWWLDKAYKVFNEMIASGFLPS---VATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
K N MI L + T + S ++V A F + E+ S D
Sbjct: 615 -----KRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSAD 669
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGI 220
V+ A + + G+ ++ E + +G+
Sbjct: 670 RVTLAAFTTACSESGKNNLVTDL-TERISRGV 700
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 129/520 (24%), Positives = 225/520 (43%), Gaps = 56/520 (10%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETY--NALICGMCKVRNMLCAV 105
P ++F +I EK M+ A EV+ M K + + + +A+I G CK+ A+
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 106 ELYDQMRVRG-LSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
++ G L PN TY +L+ LC +D+ + + GF Y+ +I
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
Y + AL M E+G++ D+VSY+ +I ++G +E+AL + + +++G+ P+
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+TY+A+I+ LC G L EAF LF +L + Y L+ C G + AF +
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLG 371
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
+M RG PS++T+N +I+GLC RV EA + +G+ D ++Y+T+
Sbjct: 372 DMEQRG--------IQPSILTYNTVINGLCMAGRVSEADEVSKGVV-----GDVITYSTL 418
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQK 403
L + +++ + E++ E I + D V + LL + G +
Sbjct: 419 LDSYIKVQNIDAVLEIRRRFLEAKIPM-------------DLVMCNILLKAFLLMGAYGE 465
Query: 404 VFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTL 463
L R M PD+ T I G K A + + S ++ + + Y+ +
Sbjct: 466 ADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS---SVSAAVCYNRI 522
Query: 464 IEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD-----GAVYNL----- 512
I+ C +A ++ + +GL + + +H++ G VY L
Sbjct: 523 IDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNS 582
Query: 513 ---------LIFDHCRRGNVNKAYEMYKEMVHYGF---FP 540
I C+RG+ A E+Y M G FP
Sbjct: 583 DVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFP 622
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 145/637 (22%), Positives = 254/637 (39%), Gaps = 129/637 (20%)
Query: 12 RHMVRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKER 65
R +V +++I G + KE V E GLL +EP L+++ +I+ LC+ +
Sbjct: 275 RDVVSYSILIDGLS-------KEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
+EEA + + G+ D Y LI G+C+ N+ A + M RG+ P+ TY +
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 126 LIDLLCTWWLDKAYKVFN-EMIASGFLPSVATYNKFITAYLSSERVEQALGI-------- 176
+I+ LC A +V + ++ G + V TY+ + +Y+ + ++ L I
Sbjct: 388 VINGLCM-----AGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK 442
Query: 177 ---------------------------FSAMAERGLSPDLVSYNAVISKFCQDGELEKAL 209
+ AM E L+PD +Y +I +C+ G++E+AL
Sbjct: 443 IPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEAL 502
Query: 210 EIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA- 268
E+ E + K + V Y+ +I ALC +G L A ++ +E+ + T L+++
Sbjct: 503 EMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSI 561
Query: 269 ----------------------------------YCLVGEFSMAFHLHDEMRHRGFLPDF 294
C G F A ++ MR +G F
Sbjct: 562 HANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTF 621
Query: 295 VIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELK 354
PS + L+ L SL D L ++ S D + Y ++ G C+ L
Sbjct: 622 -----PSTI-LKTLVDNLRSL---DAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLV 672
Query: 355 KAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
KA L + + L+ TY SL+ GL QG + + +L +
Sbjct: 673 KALNLCSFAKSRGVTLNTITYNSLINGLCQ-------------QGCLVEALRLFDSLENI 719
Query: 415 GYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKS 474
G +P VT G+ I+ L K+ A+ +L M+S +P+ IIY+++++
Sbjct: 720 GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKG--LVPNIIIYNSIVDG-------- 769
Query: 475 AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
+ G +A R V PD + +I +C++G++ +A ++ E
Sbjct: 770 -------YCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFK 822
Query: 535 HYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRS 571
F L LI + E ++R L S
Sbjct: 823 DKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 224/510 (43%), Gaps = 74/510 (14%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-- 135
+ G +P + + + + +++ C ++ Y Q+ + ++ N R Y + +W
Sbjct: 19 KSGFSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYS-----IVSWAFLN 73
Query: 136 ----DKAYKVFNEMIA-SGFLPSVATYNKFITAYLSSERVEQALGIF---SAMAERGLSP 187
+ A K N I+ + P + I + S R + + G+ + G P
Sbjct: 74 LNRYEDAEKFINIHISKASIFPRTHMLDSLIHGF-SITRDDPSKGLLILRDCLRNHGAFP 132
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGI-LP-DDVTYSALIQALCLQGSLPEAFD 245
+++ ++I +F + GE++ A+E+ K + P D+ SA+I C G A
Sbjct: 133 SSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALG 192
Query: 246 LFLEML-RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF-------------- 290
F + G + P+ TYT L+ A C +G+ L + GF
Sbjct: 193 FFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGY 252
Query: 291 -----LPDFVIQ--------FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
L D ++Q + +V+++ LI GL V+EALG+L M + G+ P+
Sbjct: 253 FKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNL 312
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFA 397
++Y ++ G C++ +L++A+ L + I +DE+ Y +L++G+
Sbjct: 313 ITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGIC-------------R 359
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTS----IAKGILLRMISSQCLT 453
+GN+ + F + +M + G P +T INGL S ++KG++ +I+ L
Sbjct: 360 KGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTL- 418
Query: 454 MPSYIIY---DTLIE-NCSYVEFKSAVGLV------KDFSTRGLVNEAAIAHERMHNMSV 503
+ SYI D ++E ++E K + LV K F G EA + M M +
Sbjct: 419 LDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDL 478
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
PD A Y +I +C+ G + +A EM+ E+
Sbjct: 479 TPDTATYATMIKGYCKTGQIEEALEMFNEL 508
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 157/305 (51%), Gaps = 12/305 (3%)
Query: 46 MEPYLVSFKGVIKELCEKERME--EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
+ P LV++ VI + C K ME + + EM R G+ PD T+N+L+ +
Sbjct: 299 LRPNLVTYNAVI-DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A L+D+M R + + +Y +L+D +C +D A+++ +M +P+V +Y+ I
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ + R ++AL +F M G++ D VSYN ++S + + G E+AL+I E GI
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK 477
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
D VTY+AL+ QG E +F EM R V P+ TY+ L+ Y G + A +
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
E + G D V+ ++ALI LC V A+ ++ M + G+SP+ V+YN+
Sbjct: 538 REFKSAGLRADVVL--------YSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 343 VLFGF 347
++ F
Sbjct: 590 IIDAF 594
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 189/417 (45%), Gaps = 76/417 (18%)
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A ++F A G+ +V ++ I+AY S E+A+ +F++M E GL P+LV+YNAVI
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 198 KFCQDG-ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF-DLFLEMLRGDV 255
+ G E ++ + E G+ PD +T+++L+ A+C +G L EA +LF EM +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRI 370
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
+Y L+ A C G+ +AF + +M V + P++V+++ +I G
Sbjct: 371 EQDVFSYNTLLDAICKGGQMDLAFEILAQMP--------VKRIMPNVVSYSTVIDGFAKA 422
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
R DEAL + M +G++ D VSYNT+L + ++ ++A ++ EM I
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGI------- 475
Query: 376 ESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT 435
D VTY++LL Y QG +V K+ EM R LP+ +T I+G +K
Sbjct: 476 ------KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 436 TSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
+K A+ + ++F + GL
Sbjct: 530 ------------------------------------YKEAMEIFREFKSAGL-------- 545
Query: 496 ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
+ D +Y+ LI C+ G V A + EM G P++ + S+I A
Sbjct: 546 --------RADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 118/226 (52%), Gaps = 1/226 (0%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R+E + S+ ++ +C+ +M+ A E++ +M K + P+ +Y+ +I G K A
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+ L+ +MR G++ + +Y +L+ + ++A + EM + G V TYN +
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
Y + ++ +F+ M + P+L++Y+ +I + + G ++A+EI E G+ D
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAY 269
V YSALI ALC G + A L EM + +SP+ TY ++ A+
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 7/221 (3%)
Query: 32 CKEKKVGETFGLL------RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK ++ F +L R+ P +VS+ VI + R +EA + EM G+A D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNE 144
+YN L+ KV A+++ +M G+ + TY +L+ D+ KVF E
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M LP++ TY+ I Y ++A+ IF GL D+V Y+A+I C++G
Sbjct: 505 MKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
+ A+ + E ++GI P+ VTY+++I A ++ + D
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
+V++ ++ ++ + +E K+V EM R+ + P+ TY+ LI G K A+E++
Sbjct: 479 VVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
+ + GL + Y +LID LC L A + +EM G P+V TYN I A+ S
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Query: 169 RVEQALGI-------FSAMAERGLSPD------------LVSYNAVISKFCQDG--ELEK 207
++++ FS+ A L+ N +K C++G EL
Sbjct: 599 TMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSC 658
Query: 208 ALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
LE+ + + I P+ VT+SA++ A S +A + LE LR
Sbjct: 659 ILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDA-SMLLEELR 702
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 179/386 (46%), Gaps = 22/386 (5%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P + ++ +LC+ R+++A V+ M G+ PD Y L+ +CK N+ A++
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQ 162
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
L ++M G N TY +L+ LC L+++ + ++ G P+ TY+ + A
Sbjct: 163 LVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAY 222
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
++A+ + + +G P+LVSYN +++ FC++G + A+ + E KG + V
Sbjct: 223 KERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVV 282
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
+Y+ L++ LC G EA L EM GD +PS TY L+ + G A + EM
Sbjct: 283 SYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM 342
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
QF + ++N +I LC +VD + L M P+ +YN +
Sbjct: 343 SKGNH------QFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI-G 395
Query: 346 GFCQIR-ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
C+ ++++A+ + + K Y+S++ L +GN
Sbjct: 396 SLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLC-------------RKGNTFAA 442
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGL 430
F+L EMTR G+ PD+ T I GL
Sbjct: 443 FQLLYEMTRCGFDPDAHTYSALIRGL 468
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 186/421 (44%), Gaps = 42/421 (9%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
L ++ ++ G P+VA + + + R+++A+ + M G+ PD +Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
++++ C+ G + A+++ + + G + VTY+AL++ LC+ GSL ++ +++
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
++P+ TY+ L+ A A L DE+ +G P+LV++N L+ G C
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKG--------GEPNLVSYNVLLTGFCK 258
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
R D+A+ + R +P G + VSYN +L C ++A L EMD
Sbjct: 259 EGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG-------- 310
Query: 375 YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG--YLPDSVTLGVFINGLNK 432
+ VTY+ L+N G ++ ++ +EM++ + + + I L K
Sbjct: 311 -----DRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK 365
Query: 433 KATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSY-VEFKSAVGLVKDFSTRGLVNEA 491
+ + L MI +C P+ Y+ + C + + + A +++ S + +
Sbjct: 366 EGKVDLVVKCLDEMIYRRC--KPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNK----QK 419
Query: 492 AIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
H+ Y +I CR+GN A+++ EM GF P + +LI
Sbjct: 420 CCTHD------------FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRG 467
Query: 552 L 552
L
Sbjct: 468 L 468
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 160/334 (47%), Gaps = 17/334 (5%)
Query: 59 ELCEKER-MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLS 117
E KER +EA +++ E+ KG P+ +YN L+ G CK A+ L+ ++ +G
Sbjct: 219 EAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFK 278
Query: 118 PNERTYMSLIDLLCT--WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
N +Y L+ LC W ++A + EM PSV TYN I + R EQAL
Sbjct: 279 ANVVSYNILLRCLCCDGRW-EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQ 337
Query: 176 IFSAMAE--RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA 233
+ M++ SYN VI++ C++G+++ ++ E + + P++ TY+A I +
Sbjct: 338 VLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGS 396
Query: 234 LCLQGS-LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
LC S + EAF + + ++ Y ++ + C G AF L EM GF P
Sbjct: 397 LCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDP 456
Query: 293 DFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM-GLSPDAVSYNTVLFGFCQIR 351
D T++ALI GLC A+ +L M E P ++N ++ G C+IR
Sbjct: 457 D--------AHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIR 508
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE 385
A E+ M EK +E TY L+EG++ E
Sbjct: 509 RTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHE 542
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 169/411 (41%), Gaps = 86/411 (20%)
Query: 32 CKEKKVGETFGLL-RMEPY-----LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK VG L+ +ME + V++ +++ LC + ++ + V + +KGLAP+
Sbjct: 152 CKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNA 211
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNE 144
TY+ L+ K R AV+L D++ V+G PN +Y L+ C D A +F E
Sbjct: 212 FTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE 271
Query: 145 MIASGF-----------------------------------LPSVATYNKFITAYLSSER 169
+ A GF PSV TYN I + R
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 331
Query: 170 VEQALGIFSAMAE--RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
EQAL + M++ SYN VI++ C++G+++ ++ E + + P++ TY
Sbjct: 332 TEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Query: 228 SAL-----------------------------------IQALCLQGSLPEAFDLFLEMLR 252
+A+ I +LC +G+ AF L EM R
Sbjct: 392 NAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR 451
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
P TY+ L+ CL G F+ A + M P++ FNA+I GL
Sbjct: 452 CGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESE-------NCKPTVDNFNAMILGL 504
Query: 313 CSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
C + R D A+ + M E P+ +Y ++ G EL+ A E+ E+
Sbjct: 505 CKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 133/326 (40%), Gaps = 62/326 (19%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPY------LVSFKGVIKELCEKERM 66
++V NV++ GF CKE + + L R P +VS+ +++ LC R
Sbjct: 245 NLVSYNVLLTGF-------CKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM-------RVRGLSPN 119
EEA ++ EM+ AP TYN LI + A+++ +M RV S
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS-- 355
Query: 120 ERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
Y +I LC +D K +EMI P+ TYN + + +V++A I
Sbjct: 356 ---YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQ 412
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
+++ + Y +VI+ C+ G A ++ E G PD TYSALI+ LCL+G
Sbjct: 413 SLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEG 472
Query: 239 ---------SLPE---------------------------AFDLFLEMLRGDVSPSNSTY 262
S+ E A ++F M+ P+ +TY
Sbjct: 473 MFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTY 532
Query: 263 TRLMYAYCLVGEFSMAFHLHDEMRHR 288
L+ E +A + DE+R R
Sbjct: 533 AILVEGIAHEDELELAKEVLDELRLR 558
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 150/359 (41%), Gaps = 57/359 (15%)
Query: 237 QGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD--- 293
+ +L ++F ++ G P+ + T+L+Y C A + + M G +PD
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 294 ---------------FVIQ---------FSPSLVTFNALIHGLCSLERVDEALGILRGMP 329
+ +Q + + VT+NAL+ GLC L ++++L + +
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 330 EMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYS 389
+ GL+P+A +Y+ + L+ AY+ + DE + LDE + G + V+Y+
Sbjct: 204 QKGLAPNAFTYSFL---------LEAAYKER-GTDEAVKLLDEIIVKG---GEPNLVSYN 250
Query: 390 SLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISS 449
LL + +G L RE+ G+ + V+ + + L A +L M
Sbjct: 251 VLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGG 310
Query: 450 QCLTMPSYIIYDTLIENCSY-VEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGA 508
PS + Y+ LI + ++ + A+ ++K+ S +G N +
Sbjct: 311 D--RAPSVVTYNILINSLAFHGRTEQALQVLKEMS-KG-------------NHQFRVTAT 354
Query: 509 VYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRN 567
YN +I C+ G V+ + EM++ P+ + ++ ++ K E ++I++
Sbjct: 355 SYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 228/552 (41%), Gaps = 104/552 (18%)
Query: 20 MIRGFATESVMSCKEKKVGETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEV-VRE 75
+IRGF ++ K+V L+ ++P L F ++ L KE ++ A+E R+
Sbjct: 118 IIRGFGRARLI----KRVISVVDLVSKFGIKPSLKVFNSILDVLV-KEDIDIAREFFTRK 172
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWW 134
M G+ D TY L+ G+ + +L M+ G++PN Y +L+ LC
Sbjct: 173 MMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+ +A + +EM P+ T+N I+AY + +++ Q++ + G PD+V+
Sbjct: 233 VGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTK 288
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
V+ C +G + +ALE+ KG D V + L++ C G + A F+EM R
Sbjct: 289 VMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKG 348
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P+ TY L+ YC VG A ++M+ +F TFN LI GL
Sbjct: 349 YLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNF--------ATFNTLIRGLSI 400
Query: 315 LERVDEALGILRGMPEMGLSPDAV------SYNTVLFGFCQIRELKKAYELKVEMDE--- 365
R D+ L IL EM D V YN V++GF + + A E ++M++
Sbjct: 401 GGRTDDGLKIL----EMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFP 456
Query: 366 -------KIIWLDE--------YTYESLM--EGLSDEVTYSSLLNDYFAQGNMQKVFKLE 408
K+I L E Y+ ++ G+ + L++ Y G +++ +L
Sbjct: 457 RAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELI 516
Query: 409 REMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCS 468
+M GYLP S T I G K+ D ++
Sbjct: 517 NDMVTRGYLPRSSTFNAVIIGFCKQ---------------------------DKVMNGIK 549
Query: 469 YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYE 528
+VE D + RG V PD YN L+ + C +G++ KA+
Sbjct: 550 FVE---------DMAERGCV----------------PDTESYNPLLEELCVKGDIQKAWL 584
Query: 529 MYKEMVHYGFFP 540
++ MV P
Sbjct: 585 LFSRMVEKSIVP 596
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 168/380 (44%), Gaps = 26/380 (6%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEE 68
V N++I + C E+K+ ++ LL P +V+ V++ LC + R+ E
Sbjct: 249 VTFNILISAY-------CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSE 301
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A EV+ + KG D N L+ G C + M A + +M +G PN TY LI
Sbjct: 302 ALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIA 361
Query: 129 LLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL-- 185
C LD A FN+M + AT+N I R + L I M +
Sbjct: 362 GYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVH 421
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
+ YN VI F ++ E ALE + +EK + P V S + +LC +G + +
Sbjct: 422 GARIDPYNCVIYGFYKENRWEDALEFLLK-MEK-LFPRAVDRSFKLISLCEKGGMDDLKT 479
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
+ +M+ PS L++ Y G+ + L ++M RG+LP TF
Sbjct: 480 AYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLP--------RSSTF 531
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
NA+I G C ++V + + M E G PD SYN +L C +++KA+ L M E
Sbjct: 532 NAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVE 591
Query: 366 KIIWLDEYTYESLMEGLSDE 385
K I D + SLM LS +
Sbjct: 592 KSIVPDPSMWSSLMFCLSQK 611
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 8/232 (3%)
Query: 4 LRATLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEK 63
+R +F ++R + I G + + + + +T R++PY G KE
Sbjct: 384 IRWNFATFNTLIR-GLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKE---- 438
Query: 64 ERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY 123
R E+A E + +M + L P + + +C+ M YDQM G P+
Sbjct: 439 NRWEDALEFLLKMEK--LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVS 496
Query: 124 MSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
LI ++++ ++ N+M+ G+LP +T+N I + ++V + MAE
Sbjct: 497 HCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAE 556
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
RG PD SYN ++ + C G+++KA + + VEK I+PD +S+L+ L
Sbjct: 557 RGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCL 608
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/386 (19%), Positives = 146/386 (37%), Gaps = 78/386 (20%)
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEK 207
GF+ S +TY R + + M + GL PD + +I F + +++
Sbjct: 71 GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKR 130
Query: 208 ALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
+ + + GI P +++++ L ++ D+ + +TR M
Sbjct: 131 VISVVDLVSKFGIKPSLKVFNSILDVL----------------VKEDIDIAREFFTRKMM 174
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
A + G+ + T+ L+ GL R+ + +L+
Sbjct: 175 ASGIHGD---------------------------VYTYGILMKGLSLTNRIGDGFKLLQI 207
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVT 387
M G++P+AV YNT+L C+ ++ +A L EM E ++VT
Sbjct: 208 MKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE-----------------PNDVT 250
Query: 388 YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMI 447
++ L++ Y + + + L + G++PD VT+ + L + S A +L R+
Sbjct: 251 FNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVE 310
Query: 448 SSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDG 507
S V+ + LVK + G + A M P+
Sbjct: 311 SKG-----------------GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNV 353
Query: 508 AVYNLLIFDHCRRGNVNKAYEMYKEM 533
YNLLI +C G ++ A + + +M
Sbjct: 354 ETYNLLIAGYCDVGMLDSALDTFNDM 379
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 123/308 (39%), Gaps = 56/308 (18%)
Query: 298 FSPSLVTFNALIHGLCSLERVDEALGILRGMPE-MGLSPDAVSYNTVLFGFCQIRELKKA 356
F S T+ AL H LC R D +L MP+ +GL PD + T++ GF + R +K+
Sbjct: 72 FIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRV 131
Query: 357 YELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
+ + + I + S+++ L E + ++F R+M +G
Sbjct: 132 ISVVDLVSKFGIKPSLKVFNSILDVLVKEDI--DIAREFFT-----------RKMMASGI 178
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAV 476
D T G+ + GL+ T I G L I P+ ++Y+TL+
Sbjct: 179 HGDVYTYGILMKGLS--LTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH----------- 225
Query: 477 GLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHY 536
L K+ + A M M +P+ +N+LI +C + ++ + ++
Sbjct: 226 ALCKN-------GKVGRARSLMSEMK-EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSL 277
Query: 537 GFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLND-SELHQVLNEIEVKKCKIDA 595
GF P + +V ++ L CN SE +VL +E K K+D
Sbjct: 278 GFVPDVVTVTKVMEVL-------------------CNEGRVSEALEVLERVESKGGKVDV 318
Query: 596 L-LNALAK 602
+ N L K
Sbjct: 319 VACNTLVK 326
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 171/378 (45%), Gaps = 24/378 (6%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLL-------RMEPYLVSFKGVIKELCEKERME 67
+ N +I G CK ++ E LL R P V++ +I C ++E
Sbjct: 371 IHFNTLIDGL-------CKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLE 423
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
AKEVV M + P+ T N ++ GMC+ + AV + M G+ N TYM+LI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 128 DLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
C+ ++KA + +M+ +G P Y I+ R A+ + + E G S
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
DL++YN +I FC EK E+ + ++G PD +TY+ LI E+ +
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF-ESVER 602
Query: 247 FLEMLRGD-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
+E +R D + P+ +TY ++ AYC VGE A L +M + +P+ V +
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS-------KVNPNTVIY 655
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
N LI+ L +AL + M + P+ +YN + + + + +L EM E
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Query: 366 KIIWLDEYTYESLMEGLS 383
+ ++ T E LME LS
Sbjct: 716 QSCEPNQITMEILMERLS 733
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 189/435 (43%), Gaps = 71/435 (16%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRK--------------------GL-- 81
+++ P +V+ +I LC+ R++EA EV +M K GL
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 82 --------------------APDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
AP+ TYN LI G C+ + A E+ +M+ + PN
Sbjct: 383 VGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 122 TYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
T +++ +C L+ A F +M G +V TY I A S VE+A+ + M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
E G SPD Y A+IS CQ A+ + + E G D + Y+ LI C + +
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNT 562
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+ +++ +M + P + TY L+ + +F + ++MR G P
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG--------LDP 614
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGL----SPDAVSYNTVLFGFCQIRELKKA 356
++ T+ A+I CS+ +DEAL + + +MGL +P+ V YN ++ F ++ +A
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 357 YELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
LK EM K++ + TY +L + L+++ +LL KL EM
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL-------------KLMDEMVEQSC 718
Query: 417 LPDSVTLGVFINGLN 431
P+ +T+ + + L+
Sbjct: 719 EPNQITMEILMERLS 733
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 211/500 (42%), Gaps = 92/500 (18%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA--- 104
P V I LC+ R A +++ ++ + + +NAL+ C RNM +
Sbjct: 257 PNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMN 314
Query: 105 --VELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEM----IASGFLPSVAT- 156
V D++++R P+ T LI+ LC + +D+A +VF +M G + +
Sbjct: 315 DLVLKMDEVKIR---PDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSI 371
Query: 157 -YNKFITAYLSSERVEQALGIFSAMA-ERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
+N I R+++A + M E +P+ V+YN +I +C+ G+LE A E+ +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
E I P+ VT + ++ +C L A F++M + V + TY L++A C V
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 275 FSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS 334
A + +++M G PD I + ALI GLC + R +A+ ++ + E G S
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYY--------ALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 335 PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLN 393
D ++YN ++ FC +K YE+ +M++ EG D +TY++L++
Sbjct: 544 LDLLAYNMLIGLFCDKNNTEKVYEMLTDMEK--------------EGKKPDSITYNTLIS 589
Query: 394 DYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
+ + + V ++ +M +G P T G I+
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY----------------------- 626
Query: 454 MPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLL 513
CS E A+ L KD VN P+ +YN+L
Sbjct: 627 -------------CSVGELDEALKLFKDMGLHSKVN---------------PNTVIYNIL 658
Query: 514 IFDHCRRGNVNKAYEMYKEM 533
I + GN +A + +EM
Sbjct: 659 INAFSKLGNFGQALSLKEEM 678
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 177/427 (41%), Gaps = 39/427 (9%)
Query: 129 LLCTWWLDKAYKVFNEMIA--SGFLPSVATYNKFITAYLSSERV--EQALGIFSAMAERG 184
LL +D A+KV +EM+ S F P+ T + + + E+ + + S + G
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHG 254
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
+SP+ V IS C++ A +I ++ ++ + ++AL+ L +
Sbjct: 255 VSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMN 314
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
DL L+M + P T L+ C A + ++MR + VI+ +
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADS--IH 372
Query: 305 FNALIHGLCSLERVDEALGILRGMP-EMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
FN LI GLC + R+ EA +L M E +P+AV+YN ++ G+C+ +L+ A E+ M
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 364 DEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
E I + T +++ G+ + L NM VF ++ M + G + VT
Sbjct: 433 KEDEIKPNVVTVNTIVGGM---CRHHGL--------NMAVVFFMD--MEKEGVKGNVVTY 479
Query: 424 GVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDF 482
I+ + A +M+ + C P IY LI C A+ +V
Sbjct: 480 MTLIHACCSVSNVEKAMYWYEKMLEAGC--SPDAKIYYALISGLCQVRRDHDAIRVV--- 534
Query: 483 STRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHM 542
E++ D YN+LI C + N K YEM +M G P
Sbjct: 535 -------------EKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDS 581
Query: 543 FSVLSLI 549
+ +LI
Sbjct: 582 ITYNTLI 588
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 37/195 (18%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
L+++ +I C+K E+ E++ +M ++G PD TYN LI K ++ + +
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEM---------------IASGF--- 150
QMR GL P TY ++ID C+ LD+A K+F +M + + F
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 151 ------------------LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
P+V TYN + E L + M E+ P+ ++
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
Query: 193 NAVISKFCQDGELEK 207
++ + EL K
Sbjct: 726 EILMERLSGSDELVK 740
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 160/395 (40%), Gaps = 57/395 (14%)
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
++ L ++ E+ + +V+ N +I F + G + +++ + E ++ + V + +
Sbjct: 134 DKLLRLYEIAKEKNIPLTVVATNLLIRWFGRMGMVNQSVLV-YERLDSNMKNSQVR-NVV 191
Query: 231 IQALCLQGSLPEAFDLFLEMLRGD-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
+ L G + +AF + EML+ + V P N ++ LH+ + R
Sbjct: 192 VDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIV--------------LHEVWKGRL 237
Query: 290 FLPDFVIQF---------SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSY 340
+ +I SP+ V I LC R + A IL + + +A +
Sbjct: 238 LTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPF 297
Query: 341 NTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGN 400
N +L + ++ + +L ++MDE I D T L+ L L
Sbjct: 298 NALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL-------- 349
Query: 401 MQKVF-KLEREMTRNGYL--PDSVTLGVFINGLNKKATTSIAKGILLRM-ISSQCLTMPS 456
+VF K+ + T +G + DS+ I+GL K A+ +L+RM + +C P+
Sbjct: 350 --EVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC--APN 405
Query: 457 YIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFD 516
+ Y+ LI+ + G + A RM +KP+ N ++
Sbjct: 406 AVTYNCLIDG---------------YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 517 HCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
CR +N A + +M G ++ + ++LIHA
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 171/378 (45%), Gaps = 24/378 (6%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLL-------RMEPYLVSFKGVIKELCEKERME 67
+ N +I G CK ++ E LL R P V++ +I C ++E
Sbjct: 371 IHFNTLIDGL-------CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
AKEVV M + P+ T N ++ GMC+ + AV + M G+ N TYM+LI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 128 DLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
C+ ++KA + +M+ +G P Y I+ R A+ + + E G S
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
DL++YN +I FC EK E+ + ++G PD +TY+ LI E+ +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF-ESVER 602
Query: 247 FLEMLRGD-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
+E +R D + P+ +TY ++ AYC VGE A L +M + +P+ V +
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS-------KVNPNTVIY 655
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
N LI+ L +AL + M + P+ +YN + + + + +L EM E
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Query: 366 KIIWLDEYTYESLMEGLS 383
+ ++ T E LME LS
Sbjct: 716 QSCEPNQITMEILMERLS 733
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 210/500 (42%), Gaps = 92/500 (18%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA--- 104
P V I LC+ R A +++ ++ + + +NAL+ C RNM +
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMN 314
Query: 105 --VELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEM----IASGFLPSVAT- 156
V D++++R P+ T LI+ LC + +D+A +VF +M G + +
Sbjct: 315 DLVLKMDEVKIR---PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 157 -YNKFITAYLSSERVEQALGIFSAMA-ERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
+N I R+++A + M E P+ V+YN +I +C+ G+LE A E+ +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
E I P+ VT + ++ +C L A F++M + V + TY L++A C V
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 275 FSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS 334
A + +++M G PD I + ALI GLC + R +A+ ++ + E G S
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYY--------ALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 335 PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLN 393
D ++YN ++ FC +K YE+ +M++ EG D +TY++L++
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK--------------EGKKPDSITYNTLIS 589
Query: 394 DYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
+ + + V ++ +M +G P T G I+
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY----------------------- 626
Query: 454 MPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLL 513
CS E A+ L KD VN P+ +YN+L
Sbjct: 627 -------------CSVGELDEALKLFKDMGLHSKVN---------------PNTVIYNIL 658
Query: 514 IFDHCRRGNVNKAYEMYKEM 533
I + GN +A + +EM
Sbjct: 659 INAFSKLGNFGQALSLKEEM 678
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 188/435 (43%), Gaps = 71/435 (16%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRK--------------------GL-- 81
+++ P +V+ +I LC+ R++EA EV +M K GL
Sbjct: 323 VKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 82 --------------------APDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
P+ TYN LI G C+ + A E+ +M+ + PN
Sbjct: 383 VGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 122 TYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
T +++ +C L+ A F +M G +V TY I A S VE+A+ + M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
E G SPD Y A+IS CQ A+ + + E G D + Y+ LI C + +
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNA 562
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+ +++ +M + P + TY L+ + +F + ++MR G P
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG--------LDP 614
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGL----SPDAVSYNTVLFGFCQIRELKKA 356
++ T+ A+I CS+ +DEAL + + +MGL +P+ V YN ++ F ++ +A
Sbjct: 615 TVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 357 YELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
LK EM K++ + TY +L + L+++ +LL KL EM
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL-------------KLMDEMVEQSC 718
Query: 417 LPDSVTLGVFINGLN 431
P+ +T+ + + L+
Sbjct: 719 EPNQITMEILMERLS 733
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 179/428 (41%), Gaps = 41/428 (9%)
Query: 129 LLCTWWLDKAYKVFNEMIA--SGFLPSVATYNKFITAYLSSERV---EQALGIFSAMAER 183
LL +D A+KV +EM+ S F P+ T + + + ER+ E+ + + S +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITAD-IVLHEVWKERLLTEEKIIALISRFSSH 253
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
G+SP+ V IS C++ A +I ++ ++ + ++AL+ L +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
DL L+M + P T L+ C A + ++MR + VI+ +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADS--I 371
Query: 304 TFNALIHGLCSLERVDEALGILRGMP-EMGLSPDAVSYNTVLFGFCQIRELKKAYELKVE 362
FN LI GLC + R+ EA +L M E P+AV+YN ++ G+C+ +L+ A E+
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 363 MDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
M E I + T +++ G+ + L NM VF ++ M + G + VT
Sbjct: 432 MKEDEIKPNVVTVNTIVGGM---CRHHGL--------NMAVVFFMD--MEKEGVKGNVVT 478
Query: 423 LGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKD 481
I+ + A +M+ + C P IY LI C A+ +V
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGC--SPDAKIYYALISGLCQVRRDHDAIRVV-- 534
Query: 482 FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPH 541
E++ D YN+LI C + N K YEM +M G P
Sbjct: 535 --------------EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Query: 542 MFSVLSLI 549
+ +LI
Sbjct: 581 SITYNTLI 588
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 37/195 (18%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
L+++ +I C+K E+ E++ +M ++G PD TYN LI K ++ + +
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEM---------------IASGF--- 150
QMR GL P TY ++ID C+ LD+A K+F +M + + F
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 151 ------------------LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
P+V TYN + E L + M E+ P+ ++
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITM 725
Query: 193 NAVISKFCQDGELEK 207
++ + EL K
Sbjct: 726 EILMERLSGSDELVK 740
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 131/335 (39%), Gaps = 49/335 (14%)
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGD-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+ ++ L G + +AF + EML+ + V P N ++ LH+ +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIV--------------LHEVWK 234
Query: 287 HRGFLPDFVIQF---------SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
R + +I SP+ V I LC R + A IL + + +A
Sbjct: 235 ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEA 294
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFA 397
+N +L + ++ + +L ++MDE I D T L+ L L + F
Sbjct: 295 PPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL-EVFE 353
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM-ISSQCLTMPS 456
Q + +R N DS+ I+GL K A+ +L+RM + +C+ P+
Sbjct: 354 Q------MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV--PN 405
Query: 457 YIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFD 516
+ Y+ LI+ + G + A RM +KP+ N ++
Sbjct: 406 AVTYNCLIDG---------------YCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 517 HCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
CR +N A + +M G ++ + ++LIHA
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 155/310 (50%), Gaps = 10/310 (3%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
+F +I+ LC + E+A E++ M+ G PD TYN LI G CK + A E++ +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 112 RVRGL-SPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
+ + SP+ TY S+I C + +A + ++M+ G P+ T+N + Y +
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
+ A I M G PD+V++ ++I +C+ G++ + + E +G+ P+ TYS
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
LI ALC + L +A +L ++ D+ P Y ++ +C G+ + A + +EM +
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 290 FLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
PD +TF LI G C R+ EA+ I M +G SPD ++ +++L +
Sbjct: 448 CKPD--------KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 350 IRELKKAYEL 359
K+AY L
Sbjct: 500 AGMAKEAYHL 509
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 171/403 (42%), Gaps = 65/403 (16%)
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER------------------------- 121
TYN L +CK A ++++ M+ G+SPN R
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 122 --------TYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQ 172
SL++ L ++ A K+F+E + T+N I + E+
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL-PDDVTYSALI 231
AL + M+ G PD+V+YN +I FC+ EL KA E+ + + PD VTY+++I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
C G + EA L +MLR + P+N T+ L+ Y GE A + +M G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
PD +VTF +LI G C + +V + + M G+ P+A +Y+ ++ C
Sbjct: 345 PD--------VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGL----------------------SDEVTYS 389
L KA EL ++ K I + Y +++G D++T++
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 390 SLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNK 432
L+ + +G M + + +M G PD +T+ ++ L K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 184/424 (43%), Gaps = 52/424 (12%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
S TYN + + + A +F M G+SP+ ++S F + G+L A +
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 213 AETVE-KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
++ E +G + ++L+ L + +A LF E LR T+ L+ C
Sbjct: 162 LQSFEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 272 VGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM 331
VG+ A L M G PD +VT+N LI G C +++A + + +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPD--------IVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 332 GL-SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG--------- 381
+ SPD V+Y +++ G+C+ ++++A L +M I+ T+ L++G
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 382 -------------LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFIN 428
D VT++SL++ Y G + + F+L EM G P++ T + IN
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 429 GLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLV 488
L + A+ +L ++ S + P +Y+ +I+ F G V
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQP--FMYNPVIDG---------------FCKAGKV 433
Query: 489 NEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSL 548
NEA + E M KPD + +LI HC +G + +A ++ +MV G P +V SL
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 549 IHAL 552
+ L
Sbjct: 494 LSCL 497
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 175/370 (47%), Gaps = 21/370 (5%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
++ L + +R+E+A ++ E R D +T+N LI G+C V A+EL M G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 116 LSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFL--PSVATYNKFITAYLSSERVEQ 172
P+ TY +LI C + L+KA ++F + + SG + P V TY I+ Y + ++ +
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
A + M G+ P V++N ++ + + GE+ A EI+ + + G PD VT+++LI
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
C G + + F L+ EM + P+ TY+ L+ A C A L ++ + +P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 293 DFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
+ +N +I G C +V+EA I+ M + PD +++ ++ G C
Sbjct: 416 QPFM--------YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Query: 353 LKKAYELKVEMDEKIIWLDEYTYESLME-----GLSDEVTYSSLLNDYFAQGNMQKVFKL 407
+ +A + +M D+ T SL+ G++ E + LN +G V L
Sbjct: 468 MFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH---LNQIARKGQSNNVVPL 524
Query: 408 EREMTRNGYL 417
E + T N L
Sbjct: 525 ETK-TANATL 533
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 9/278 (3%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLR----MEPYLVSFKGVIKELCEKERMEEA 69
+V N +I+GF + ++ K E F ++ P +V++ +I C+ +M EA
Sbjct: 241 IVTYNTLIQGFCKSNELN----KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 70 KEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL 129
++ +M R G+ P T+N L+ G K ML A E+ +M G P+ T+ SLID
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 130 LC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
C + + ++++ EM A G P+ TY+ I A + R+ +A + +A + + P
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
YN VI FC+ G++ +A I E +K PD +T++ LI C++G + EA +F
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+M+ SP T + L+ G A+HL+ R
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 9/281 (3%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEVVR 74
N++IRG K +K E G++ EP +V++ +I+ C+ + +A E+ +
Sbjct: 210 NILIRGLCGVG----KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 75 EMNRKGL-APDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-T 132
++ + +PD TY ++I G CK M A L D M G+ P T+ L+D
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 133 WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
+ A ++ +MI+ G P V T+ I Y +V Q ++ M RG+ P+ +Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
+ +I+ C + L KA E+ + K I+P Y+ +I C G + EA + EM +
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
P T+T L+ +C+ G A + +M G PD
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P++ + VI C+ ++ EA +V EM +K PD T+ LI G C M AV
Sbjct: 416 QPFM--YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASG 149
++ +M G SP++ T SL+ L + K N++ G
Sbjct: 474 IFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG 516
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 155/310 (50%), Gaps = 10/310 (3%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
+F +I+ LC + E+A E++ M+ G PD TYN LI G CK + A E++ +
Sbjct: 208 TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV 267
Query: 112 RVRGL-SPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
+ + SP+ TY S+I C + +A + ++M+ G P+ T+N + Y +
Sbjct: 268 KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGE 327
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
+ A I M G PD+V++ ++I +C+ G++ + + E +G+ P+ TYS
Sbjct: 328 MLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSI 387
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
LI ALC + L +A +L ++ D+ P Y ++ +C G+ + A + +EM +
Sbjct: 388 LINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKK 447
Query: 290 FLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
PD +TF LI G C R+ EA+ I M +G SPD ++ +++L +
Sbjct: 448 CKPD--------KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Query: 350 IRELKKAYEL 359
K+AY L
Sbjct: 500 AGMAKEAYHL 509
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 171/403 (42%), Gaps = 65/403 (16%)
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER------------------------- 121
TYN L +CK A ++++ M+ G+SPN R
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 122 --------TYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQ 172
SL++ L ++ A K+F+E + T+N I + E+
Sbjct: 165 FEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEK 224
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL-PDDVTYSALI 231
AL + M+ G PD+V+YN +I FC+ EL KA E+ + + PD VTY+++I
Sbjct: 225 ALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI 284
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
C G + EA L +MLR + P+N T+ L+ Y GE A + +M G
Sbjct: 285 SGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
PD +VTF +LI G C + +V + + M G+ P+A +Y+ ++ C
Sbjct: 345 PD--------VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGL----------------------SDEVTYS 389
L KA EL ++ K I + Y +++G D++T++
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 390 SLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNK 432
L+ + +G M + + +M G PD +T+ ++ L K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 184/424 (43%), Gaps = 52/424 (12%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
S TYN + + + A +F M G+SP+ ++S F + G+L A +
Sbjct: 102 SFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL 161
Query: 213 AETVE-KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
++ E +G + ++L+ L + +A LF E LR T+ L+ C
Sbjct: 162 LQSFEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCG 218
Query: 272 VGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM 331
VG+ A L M G PD +VT+N LI G C +++A + + +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPD--------IVTYNTLIQGFCKSNELNKASEMFKDVKSG 270
Query: 332 GL-SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG--------- 381
+ SPD V+Y +++ G+C+ ++++A L +M I+ T+ L++G
Sbjct: 271 SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLT 330
Query: 382 -------------LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFIN 428
D VT++SL++ Y G + + F+L EM G P++ T + IN
Sbjct: 331 AEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILIN 390
Query: 429 GLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLV 488
L + A+ +L ++ S + P +Y+ +I+ F G V
Sbjct: 391 ALCNENRLLKARELLGQLASKDIIPQP--FMYNPVIDG---------------FCKAGKV 433
Query: 489 NEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSL 548
NEA + E M KPD + +LI HC +G + +A ++ +MV G P +V SL
Sbjct: 434 NEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSL 493
Query: 549 IHAL 552
+ L
Sbjct: 494 LSCL 497
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 175/370 (47%), Gaps = 21/370 (5%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
++ L + +R+E+A ++ E R D +T+N LI G+C V A+EL M G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 116 LSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFL--PSVATYNKFITAYLSSERVEQ 172
P+ TY +LI C + L+KA ++F + + SG + P V TY I+ Y + ++ +
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
A + M G+ P V++N ++ + + GE+ A EI+ + + G PD VT+++LI
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
C G + + F L+ EM + P+ TY+ L+ A C A L ++ + +P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 293 DFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
+ +N +I G C +V+EA I+ M + PD +++ ++ G C
Sbjct: 416 QPFM--------YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGR 467
Query: 353 LKKAYELKVEMDEKIIWLDEYTYESLME-----GLSDEVTYSSLLNDYFAQGNMQKVFKL 407
+ +A + +M D+ T SL+ G++ E + LN +G V L
Sbjct: 468 MFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH---LNQIARKGQSNNVVPL 524
Query: 408 EREMTRNGYL 417
E + T N L
Sbjct: 525 ETK-TANATL 533
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 9/278 (3%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLR----MEPYLVSFKGVIKELCEKERMEEA 69
+V N +I+GF + ++ K E F ++ P +V++ +I C+ +M EA
Sbjct: 241 IVTYNTLIQGFCKSNELN----KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREA 296
Query: 70 KEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL 129
++ +M R G+ P T+N L+ G K ML A E+ +M G P+ T+ SLID
Sbjct: 297 SSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDG 356
Query: 130 LC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
C + + ++++ EM A G P+ TY+ I A + R+ +A + +A + + P
Sbjct: 357 YCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQ 416
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
YN VI FC+ G++ +A I E +K PD +T++ LI C++G + EA +F
Sbjct: 417 PFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFH 476
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+M+ SP T + L+ G A+HL+ R
Sbjct: 477 KMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 9/281 (3%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEVVR 74
N++IRG K +K E G++ EP +V++ +I+ C+ + +A E+ +
Sbjct: 210 NILIRGLCGVG----KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 75 EMNRKGL-APDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-T 132
++ + +PD TY ++I G CK M A L D M G+ P T+ L+D
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 133 WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
+ A ++ +MI+ G P V T+ I Y +V Q ++ M RG+ P+ +Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
+ +I+ C + L KA E+ + K I+P Y+ +I C G + EA + EM +
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
P T+T L+ +C+ G A + +M G PD
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPD 486
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P++ + VI C+ ++ EA +V EM +K PD T+ LI G C M AV
Sbjct: 416 QPFM--YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS 473
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASG 149
++ +M G SP++ T SL+ L + K N++ G
Sbjct: 474 IFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIARKG 516
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 162/319 (50%), Gaps = 4/319 (1%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA-V 105
+P ++ V+ L E+ ++ A + + M GL P + N LI +C+ + A +
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+++ +M RG P+ TY +LI LC + +D+A K+F EM+ P+V TY I
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S+ V++A+ M +G+ P++ +Y++++ C+DG +A+E+ + +G P+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+ LI LC + + EA +L M + P Y +++ +C + +F A + DE
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M G P+ + ++ + T N ++ GLC+ A + M G+S + + +++
Sbjct: 358 MILGGITPNR-LTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLV 415
Query: 345 FGFCQIRELKKAYELKVEM 363
C+ E +KA +L E+
Sbjct: 416 KCLCKKGEFQKAVQLVDEI 434
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 47/276 (17%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P ++ +I LC R++EAK++ EM K AP TY +LI G+C +N+ A+
Sbjct: 189 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIASGFLPSVATYNKFITAYL 165
++M+ +G+ PN TY SL+D LC +A ++F M+A G P++ TY IT
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+++++A+ + M +GL PD Y VIS FC + +A E + GI P+ +
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 226 TYS-----------------------------------------ALIQALCLQGSLPEAF 244
T++ +L++ LC +G +A
Sbjct: 369 TWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAV 428
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCL----VGEFS 276
L E++ PS T+ +L+ + L VGE S
Sbjct: 429 QLVDEIVTDGCIPSKGTW-KLLIGHTLDKTIVGEAS 463
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 169/398 (42%), Gaps = 52/398 (13%)
Query: 156 TYNKFITAYLSSERVEQALGIF-SAMAE--RGLSPDLVSYNAVISKFCQDGELEKALEIK 212
T ++ I + + VE+++ +F SA AE G D S+ ++ + + + A ++
Sbjct: 15 TPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLI 74
Query: 213 AE-TVEKGILPDDVTYSALIQALCLQ-GSLPEAFD---LFLEMLRGDVSPSNSTYTRLMY 267
+E ++ +D+ S +C G + FD +F +M D PS Y ++
Sbjct: 75 VRMKIENCVVSEDILLS-----ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE-RVDEALGILR 326
+ ++AF + MR G LP P++ + N LI LC + VD L I
Sbjct: 130 ILVEENQLNLAFKFYKNMREIG-LP-------PTVASLNVLIKALCRNDGTVDAGLKIFL 181
Query: 327 GMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV 386
MP+ G PD+ +Y T++ G C+ + +A +L EM EK + V
Sbjct: 182 EMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK-------------DCAPTVV 228
Query: 387 TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
TY+SL+N N+ + + EM G P+ T ++GL K + A + M
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM 288
Query: 447 ISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
++ C P+ + Y TLI GL K+ + EA +RM+ +KPD
Sbjct: 289 MARGC--RPNMVTYTTLI-----------TGLCKEQK----IQEAVELLDRMNLQGLKPD 331
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFS 544
+Y +I C +A EM+ G P+ +
Sbjct: 332 AGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLT 369
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 13/233 (5%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C K V E L +EP + ++ ++ LC+ R +A E+ M +G P+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNE 144
TY LI G+CK + + AVEL D+M ++GL P+ Y +I C +A +E
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 145 MIASGFLPSVATYNKFITAY------LSSERVEQALGIFSAMAERGLSPDLVSYNAVISK 198
MI G P+ T+N + L + +A ++ +M RG+S ++ + +++
Sbjct: 358 MILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKC 417
Query: 199 FCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
C+ GE +KA+++ E V G +P T+ LI + + EA D L L
Sbjct: 418 LCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTLLRDL 470
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 152/401 (37%), Gaps = 77/401 (19%)
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
Y R +L +F M + P +Y V++ ++ +L A + E G+ P
Sbjct: 95 GYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPP 154
Query: 223 DDVTYSALIQALCLQ-GSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
+ + LI+ALC G++ +FLEM +
Sbjct: 155 TVASLNVLIKALCRNDGTVDAGLKIFLEMPK----------------------------- 185
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
RG PD T+ LI GLC R+DEA + M E +P V+Y
Sbjct: 186 ------RGCDPDSY--------TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYT 231
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE---------------- 385
+++ G C + + +A EM K I + +TY SLM+GL +
Sbjct: 232 SLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMAR 291
Query: 386 ------VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIA 439
VTY++L+ + +Q+ +L M G PD+ G I+G + A
Sbjct: 292 GCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREA 351
Query: 440 KGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMH 499
L MI P+ + ++ ++ + V GL ++ +R A + M
Sbjct: 352 ANFLDEMILGG--ITPNRLTWNIHVKTSNEV----VRGLCANYPSR-----AFTLYLSMR 400
Query: 500 NMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
+ + + L+ C++G KA ++ E+V G P
Sbjct: 401 SRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIP 441
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 106/254 (41%), Gaps = 29/254 (11%)
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
++ G + R ++L + M + P +Y TVL + +L A++ M E
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI 150
Query: 367 IIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVF 426
+ + L++ L ND G + K+ EM + G PDS T G
Sbjct: 151 GLPPTVASLNVLIKALCR--------ND----GTVDAGLKIFLEMPKRGCDPDSYTYGTL 198
Query: 427 INGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRG 486
I+GL + AK + M+ C P+ + Y +LI GL +
Sbjct: 199 ISGLCRFGRIDEAKKLFTEMVEKDC--APTVVTYTSLIN-----------GLCGSKN--- 242
Query: 487 LVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVL 546
V+EA E M + ++P+ Y+ L+ C+ G +A E+++ M+ G P+M +
Sbjct: 243 -VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYT 301
Query: 547 SLIHALYYDRKNSE 560
+LI L ++K E
Sbjct: 302 TLITGLCKEQKIQE 315
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 184/445 (41%), Gaps = 57/445 (12%)
Query: 122 TYMSLIDLLCTWWL-DKAYKVFNEMIASGFLP-SVATYNKFITAYLSSERVEQALGIFSA 179
TYM+LI L L + Y+ E++ + ++ S A ++ + A ++ V +AL +F
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG-ILPDDVTYSALIQALCLQG 238
R P +YN+VI Q+G+ EK E+ E +G PD +TYSALI + G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
A LF EM + P+ YT L+ Y VG+ A L +EM+ G
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG--------C 299
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN---TVLFGFCQIREL-- 353
SP++ T+ LI GL RVDEA G + M GL+PD V N +L ++ EL
Sbjct: 300 SPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTN 359
Query: 354 ---------------------KKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL 392
K +E K + E W D+ +S+ E TYS L+
Sbjct: 360 VFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS---PSEFTYSILI 416
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
+ Y ++K L EM G+ P IN L K A
Sbjct: 417 DGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE----------- 465
Query: 453 TMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNL 512
++ L EN V + ++K F G ++EA M N PD YN
Sbjct: 466 ------LFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNA 519
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYG 537
L+ + G +N+A + ++M G
Sbjct: 520 LMSGMVKAGMINEANSLLRKMEENG 544
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 175/369 (47%), Gaps = 25/369 (6%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
++E+A ++ EM R G +P TY LI G+ K + A Y M GL+P+
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 125 SLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE-RVEQALGIFSAMAE 182
+L+++L +++ VF+EM P+V +YN I A S+ V + F M
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE 242
+SP +Y+ +I +C+ +EKAL + E EKG P Y +LI AL
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 243 AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSL 302
A +LF E+ + S+ Y ++ + G+ S A L +EM+++G PD +
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPD--------V 514
Query: 303 VTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVE 362
+NAL+ G+ ++EA +LR M E G D S+N +L GF + ++A +E
Sbjct: 515 YAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRA----IE 570
Query: 363 MDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
M E I G+ D VTY++LL + G ++ ++ REM G+ D++
Sbjct: 571 MFETI----------KHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAI 620
Query: 422 TLGVFINGL 430
T ++ +
Sbjct: 621 TYSSILDAV 629
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 208/473 (43%), Gaps = 41/473 (8%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLA-PDCETYNALICGMCKVRNMLC 103
+ +P ++ VI L ++ + E+ EV EM +G PD TY+ALI K+
Sbjct: 192 KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDS 251
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDL-LCTWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A+ L+D+M+ + P E+ Y +L+ + ++KA +F EM +G P+V TY + I
Sbjct: 252 AIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIK 311
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ RV++A G + M GL+PD+V N +++ + G +E+ + +E P
Sbjct: 312 GLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTP 371
Query: 223 DDVTYSALIQALC-LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
V+Y+ +I+AL + + E F +M VSPS TY+ L+ YC A L
Sbjct: 372 TVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLL 431
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+EM +G F P + +LI+ L +R + A + + + E + + Y
Sbjct: 432 LEEMDEKG--------FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM 401
++ F + +L +A +L EM + D Y Y +LM G+ G +
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM-------------VKAGMI 530
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
+ L R+M NG D + + +NG + T + I + P + Y+
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFAR--TGVPRRAIEMFETIKHSGIKPDGVTYN 588
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
TL+ C F+ G+ EAA M + + D Y+ ++
Sbjct: 589 TLL-GC--------------FAHAGMFEEAARMMREMKDKGFEYDAITYSSIL 626
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 115/488 (23%), Positives = 201/488 (41%), Gaps = 52/488 (10%)
Query: 91 LICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASG 149
L+ + + + + A+ ++ Q + R P TY S+I +L +K ++V+ EM G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 150 -FLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
P TY+ I++Y R + A+ +F M + + P Y ++ + + G++EKA
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
L++ E G P TY+ LI+ L G + EA+ + +MLR ++P LM
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC-SLERVDEALGILRG 327
VG ++ EM + + +P++V++N +I L S V E
Sbjct: 348 LGKVGRVEELTNVFSEMG--------MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDK 399
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVT 387
M +SP +Y+ ++ G+C+ ++KA L EMDEK Y SL+ L
Sbjct: 400 MKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR 459
Query: 388 YSSLLNDYFAQ-----------------------GNMQKVFKLEREMTRNGYLPDSVTLG 424
Y + N+ F + G + + L EM G PD
Sbjct: 460 YEA-ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFST 484
++G+ K + A +L +M + C + S ++ F+
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGC-----------------RADINSHNIILNGFAR 561
Query: 485 RGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFS 544
G+ A E + + +KPDG YN L+ G +A M +EM GF +
Sbjct: 562 TGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAIT 621
Query: 545 VLSLIHAL 552
S++ A+
Sbjct: 622 YSSILDAV 629
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 123/271 (45%), Gaps = 3/271 (1%)
Query: 42 GLLRMEPYLVSFKGVIKELCE-KERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRN 100
G+ R P +VS+ VIK L E K + E +M ++P TY+ LI G CK
Sbjct: 365 GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 101 MLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNK 159
+ A+ L ++M +G P Y SLI+ L + A ++F E+ + S Y
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV 484
Query: 160 FITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
I + ++ +A+ +F+ M +G PD+ +YNA++S + G + +A + + E G
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENG 544
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
D +++ ++ G A ++F + + P TY L+ + G F A
Sbjct: 545 CRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAA 604
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIH 310
+ EM+ +GF D I +S L + H
Sbjct: 605 RMMREMKDKGFEYD-AITYSSILDAVGNVDH 634
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 153/319 (47%), Gaps = 23/319 (7%)
Query: 115 GLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQA 173
G++PN T L+ LC ++ AYKV +E+ + G +P++ TY + Y++ +E A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA 233
+ M +RG PD +Y ++ +C+ G +A + + + I P++VTY +I+A
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 234 LCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
LC + EA ++F EML P +S +++ A C + A L +M +PD
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 294 FVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
+ + LIH LC RV EA + E G P ++YNT++ G C+ EL
Sbjct: 366 NAL--------LSTLIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGEL 416
Query: 354 KKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
+A L +M E+ + +TY L+EGLS GN+++ ++ EM
Sbjct: 417 TEAGRLWDDMYERKCKPNAFTYNVLIEGLS-------------KNGNVKEGVRVLEEMLE 463
Query: 414 NGYLPDSVTLGVFINGLNK 432
G P+ T + GL K
Sbjct: 464 IGCFPNKTTFLILFEGLQK 482
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 156/326 (47%), Gaps = 13/326 (3%)
Query: 35 KKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICG 94
K E+FG+ P + + ++K LC+K +E A +V+ E+ GL P+ TY ++ G
Sbjct: 179 KNSKESFGI---TPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGG 235
Query: 95 MCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPS 153
+M A + ++M RG P+ TY L+D C +A V ++M + P+
Sbjct: 236 YVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPN 295
Query: 154 VATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKA 213
TY I A ++ +A +F M ER PD VI C+D ++++A +
Sbjct: 296 EVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWR 355
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
+ ++ +PD+ S LI LC +G + EA LF E +G + PS TY L+ C G
Sbjct: 356 KMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKG 414
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
E + A L D+M R + P+ T+N LI GL V E + +L M E+G
Sbjct: 415 ELTEAGRLWDDMYER--------KCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGC 466
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYEL 359
P+ ++ + G ++ + + A ++
Sbjct: 467 FPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 148/330 (44%), Gaps = 23/330 (6%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P LV++ ++ + ME AK V+ EM +G PD TY L+ G CK+ A +
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 283
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIASGFLPSVATYNKFITAYLS 166
D M + PNE TY +I LC +A +F+EM+ F+P + K I A
Sbjct: 284 MDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCE 343
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+V++A G++ M + PD + +I C++G + +A ++ E EKG +P +T
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLT 402
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y+ LI +C +G L EA L+ +M P+ TY L+ G + +EM
Sbjct: 403 YNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEML 462
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
G P+ TF L GL L + ++A+ I+ M M D S+ L
Sbjct: 463 EIGCFPN--------KTTFLILFEGLQKLGKEEDAMKIV-SMAVMNGKVDKESWELFLKK 513
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
F E+D+ ++ L E +E
Sbjct: 514 FAG------------ELDKGVLPLKELLHE 531
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 196/453 (43%), Gaps = 49/453 (10%)
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIA---SGFLPSVATYNKFIT- 162
LY G + N TY S++ L +A+ ++A + + P N FI
Sbjct: 70 LYAGKSHPGFTHNYDTYHSILFKLSR---ARAFDPVESLMADLRNSYPPIKCGENLFIDL 126
Query: 163 --AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEK-G 219
Y + R E ++ IF + + G+ + S N +++ Q+ + + + E G
Sbjct: 127 LRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFG 186
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
I P+ T + L++ALC + + A+ + E+ + P+ TYT ++ Y G+ A
Sbjct: 187 ITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAK 246
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
+ +EM RG+ PD T+ L+ G C L R EA ++ M + + P+ V+
Sbjct: 247 RVLEEMLDRGWYPD--------ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVT 298
Query: 340 YNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQG 399
Y ++ C+ ++ +A + EM E+ D +++ L ++
Sbjct: 299 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCED-------------H 345
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
+ + L R+M +N +PD+ L I+ L K+ + A+ + ++PS +
Sbjct: 346 KVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKG---SIPSLLT 402
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
Y+TLI G+ + +G + EA + M+ KP+ YN+LI +
Sbjct: 403 YNTLI-----------AGMCE----KGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSK 447
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
GNV + + +EM+ G FP+ + L L L
Sbjct: 448 NGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGL 480
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 157/406 (38%), Gaps = 86/406 (21%)
Query: 187 PDLVSYNAVISKFCQDGELEKALEI--KAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
P + ++S Q ++ AL+I A G + TY +++ L S AF
Sbjct: 44 PQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKL----SRARAF 99
Query: 245 DL---FLEMLRGDVSP---SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
D + LR P + + L+ Y L G + + MR +PDF ++
Sbjct: 100 DPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESS------MRIFLRIPDFGVK- 152
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPE-MGLSPDAVSYNTVLFGFCQIRELKKAY 357
S+ + N L++ L +R D + + E G++P+ + N ++ C+ +++ AY
Sbjct: 153 -RSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAY 211
Query: 358 ELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
++ LDE L+ L VTY+++L Y A+G+M+ ++ EM G+
Sbjct: 212 KV----------LDEIPSMGLVPNL---VTYTTILGGYVARGDMESAKRVLEEMLDRGWY 258
Query: 418 PDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVG 477
PD ATT Y L++
Sbjct: 259 PD--------------ATT-----------------------YTVLMDG----------- 270
Query: 478 LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYG 537
+ G +EAA + M ++P+ Y ++I C+ +A M+ EM+
Sbjct: 271 ----YCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERS 326
Query: 538 FFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVL 583
F P +I AL D K E + R L++ + D+ L L
Sbjct: 327 FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 177/395 (44%), Gaps = 37/395 (9%)
Query: 127 IDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
++ LC + L++A + + I G LP V TYN I Y +++A + M E G+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
PD+ +YN++IS ++ L + L++ E + G+ PD +Y+ L+ G EAF
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 246 LFLEMLR-GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+ E + + P TY L+ A C G A L ++ R P L+T
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR---------VKPELMT 190
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+N LI+GLC RV ++R + + G +P+AV+Y T+L + + + ++K +L ++M
Sbjct: 191 YNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK 250
Query: 365 EKIIWLD-----------------EYTYESLMEGL------SDEVTYSSLLNDYFAQGNM 401
++ D E YE + E + D V+Y++LLN YF GN+
Sbjct: 251 KEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
V L E+ G PD T + +NGL T A+ L + + PS + +
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACI--GEMGMQPSVVTCN 368
Query: 462 TLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
LI+ C A+ L R ++ H
Sbjct: 369 CLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVH 403
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 176/395 (44%), Gaps = 58/395 (14%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++++ +IK ++EA V R M G+ PD TYN+LI G K + ++L
Sbjct: 46 PDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQL 105
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLDK---AYKVFNEMIA-SGFLPSVATYNKFITA 163
+D+M GLSP+ +Y +L+ C + L + A+K+ +E I +G +P + TYN + A
Sbjct: 106 FDEMLHSGLSPDMWSYNTLMS--CYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDA 163
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
S + A+ +F + R + P+L++YN +I+ C+ + + E + G P+
Sbjct: 164 LCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPN 222
Query: 224 DVTYS-----------------------------------ALIQALCLQGSLPEAFDLFL 248
VTY+ A++ AL G EA++
Sbjct: 223 AVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMH 282
Query: 249 EMLR-GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
E++R G S +Y L+ Y G L +E+ +G PD T
Sbjct: 283 ELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDD--------YTHTI 334
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
+++GL ++ A L + EMG+ P V+ N ++ G C+ + +A L M+ +
Sbjct: 335 IVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR- 393
Query: 368 IWLDEYTYESLMEGLSDE---VTYSSLLNDYFAQG 399
DE+TY S++ L + V S LL + +G
Sbjct: 394 ---DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 170/379 (44%), Gaps = 25/379 (6%)
Query: 57 IKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGL 116
+ LC+ +E A+ ++ + R G+ PD TYN LI G + + A + +MR G+
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 117 SPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
P+ TY SLI L++ ++F+EM+ SG P + +YN ++ Y R +A
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 176 IFSA-MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
I + GL P + +YN ++ C+ G + A+E+ + ++ + P+ +TY+ LI L
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL-FKHLKSRVKPELMTYNILINGL 198
Query: 235 CLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDF 294
C + + E+ + +P+ TYT ++ Y L +M+ G+ D
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 295 VIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL-SPDAVSYNTVLFGFCQIREL 353
A++ L R +EA + + G S D VSYNT+L + + L
Sbjct: 259 FANC--------AVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNL 310
Query: 354 KKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
+L E++ K + D+YT+ ++ G LLN G +K EM
Sbjct: 311 DAVDDLLEEIEMKGLKPDDYTHTIIVNG---------LLN-IGNTGGAEKHLACIGEM-- 358
Query: 414 NGYLPDSVTLGVFINGLNK 432
G P VT I+GL K
Sbjct: 359 -GMQPSVVTCNCLIDGLCK 376
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R++P L+++ +I LC+ R+ ++RE+ + G P+ TY ++ K + +
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 105 VELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPS-VATYNKFIT 162
++L+ +M+ G + + +++ L+ T ++AY+ +E++ SG + +YN +
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
Y ++ + + +GL PD ++ +++ G A + A E G+ P
Sbjct: 303 LYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQP 362
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
VT + LI LC G + A LF M D TYT +++ C G A L
Sbjct: 363 SVVTCNCLIDGLCKAGHVDRAMRLFASMEVRD----EFTYTSVVHNLCKDGRLVCASKL 417
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 35/266 (13%)
Query: 300 PSLVT--FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
P + T N ++ LC ++ A +L +G+ PD ++YNT++ G+ + + +AY
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 358 ELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
+ M E I D TY SL+ G + + + +V +L EM +G
Sbjct: 69 AVTRRMREAGIEPDVTTYNSLISGAAKNLM-------------LNRVLQLFDEMLHSGLS 115
Query: 418 PDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAV 476
PD + ++ K A IL I L +P Y+ L++ C +A+
Sbjct: 116 PDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGL-VPGIDTYNILLDALCKSGHTDNAI 174
Query: 477 GLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHY 536
L K +R VKP+ YN+LI C+ V M +E+
Sbjct: 175 ELFKHLKSR-----------------VKPELMTYNILINGLCKSRRVGSVDWMMRELKKS 217
Query: 537 GFFPHMFSVLSLIHALYYDRKNSEMG 562
G+ P+ + +++ +Y+ K E G
Sbjct: 218 GYTPNAVTYTTML-KMYFKTKRIEKG 242
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 224/521 (42%), Gaps = 68/521 (13%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
+++A+ + EM + PD ETY+ALI + A+ L D M ++P+ TY +
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 126 LIDLLCT---WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
LI+ + W +A +V +M +G P + T+N ++AY S + +AL F M
Sbjct: 219 LINACGSSGNW--REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI--LPDDVTYSALIQALCLQGSL 240
+ PD ++N +I + G+ +AL++ EK PD VT+++++ ++G +
Sbjct: 277 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI---- 296
+F M+ + P+ +Y LM AY + G A + +++ G +PD V
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 297 -----------------------QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
+ P++VT+NALI S + EA+ I R M + G+
Sbjct: 397 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLL 392
P+ VS T+L + +K + +D + G++ + Y+S +
Sbjct: 457 KPNVVSVCTLLAACSR--------------SKKKVNVDTVLSAAQSRGINLNTAAYNSAI 502
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
Y ++K L + M + DSVT + I+G + + A L M + L
Sbjct: 503 GSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM---EDL 559
Query: 453 TMP-SYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
++P + +Y +++ C+Y S +G V EA +M +PD Y
Sbjct: 560 SIPLTKEVYSSVL--CAY-------------SKQGQVTEAESIFNQMKMAGCEPDVIAYT 604
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
++ + KA E++ EM G P + +L+ A
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 201/487 (41%), Gaps = 53/487 (10%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P ++ +I EA EV ++M G+ PD T+N ++ R A+
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIA--SGFLPSVATYNKFIT 162
++ M+ + P+ T+ +I L +A +FN M + P V T+ +
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
Y +E +F AM GL P++VSYNA++ + G AL + + + GI+P
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
D V+Y+ L+ + +A ++FL M + P+ TY L+ AY G + A +
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 448
Query: 283 DEMRHRGFLP---------------------DFVIQFSPS------LVTFNALIHGLCSL 315
+M G P D V+ + S +N+ I +
Sbjct: 449 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 508
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
+++A+ + + M + + D+V++ ++ G C++ + +A EM++ I L + Y
Sbjct: 509 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 568
Query: 376 ESLMEGLS----------------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
S++ S D + Y+S+L+ Y A K +L EM
Sbjct: 569 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 628
Query: 414 NGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFK 473
NG PDS+ + NK S +L+ ++ + + + ++ + E+K
Sbjct: 629 NGIEPDSIACSALMRAFNKGGQPSNV-FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 474 SAVGLVK 480
A+ L++
Sbjct: 688 RAIDLIQ 694
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 204/479 (42%), Gaps = 88/479 (18%)
Query: 134 WLDKAYKVF-----------------------------------NEMIASGFLPSVATYN 158
W+D+A +F ++M+ + PS +TYN
Sbjct: 158 WVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYN 217
Query: 159 KFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEK 218
I A SS +AL + M + G+ PDLV++N V+S + + KAL
Sbjct: 218 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 277
Query: 219 GILPDDVTYSALIQALCLQGSLPEAFDLFLEML--RGDVSPSNSTYTRLMYAYCLVGEFS 276
+ PD T++ +I L G +A DLF M R + P T+T +M+ Y + GE
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 337
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNAL-----IHGLCSLERVDEALGILRGMPEM 331
+ + M G P++V++NAL +HG+ AL +L + +
Sbjct: 338 NCRAVFEAMVAEG--------LKPNIVSYNALMGAYAVHGMSGT-----ALSVLGDIKQN 384
Query: 332 GLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSL 391
G+ PD VSY +L + + R+ KA E+ + M ++ + VTY++L
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE-------------RRKPNVVTYNAL 431
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC 451
++ Y + G + + ++ R+M ++G P+ V++ + + ++ + +L S+
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS-RSKKKVNVDTVLSAAQSRG 490
Query: 452 LTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEA------------------AI 493
+ + + + + E + A+ L + + + ++ AI
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 494 AH-ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
++ + M ++S+ VY+ ++ + ++G V +A ++ +M G P + + S++HA
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 609
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 178/434 (41%), Gaps = 68/434 (15%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P +VS+ ++ A V+ ++ + G+ PD +Y L+ + R A
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E++ MR PN TY +LID + +L +A ++F +M G P+V + + A
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S++ + SA RG++ + +YN+ I + ELEKA+ + +K + D
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VT++ LI C PEA EM + + Y+ ++ AY G+ + A + ++
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M+ G PD ++ + +++H + E+ +A + M G+ PD+++ + ++
Sbjct: 591 MKMAGCEPD--------VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 642
Query: 345 FGFCQIRELKKAYELKVEMDEKII-------------------W---------LDEYTYE 376
F + + + L M EK I W +D Y
Sbjct: 643 RAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY-LP 701
Query: 377 SLMEGLSDEV------------------------------TYSSLLNDYFAQGNMQKVFK 406
SL GL++++ TY+ LL A GN +K +
Sbjct: 702 SLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIE 761
Query: 407 LEREMTRNGYLPDS 420
+ M+ G P +
Sbjct: 762 VLEWMSGAGIQPSN 775
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 166/408 (40%), Gaps = 47/408 (11%)
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN +I + +++A + E + PD TY ALI A G A +L +ML
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
R ++PS STY L+ A G + A + +M G PD LVT N ++
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD--------LVTHNIVLSA 257
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
S + +AL M + PD ++N +++ ++ + +A +L M EK
Sbjct: 258 YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK----- 312
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
E D VT++S+++ Y +G ++ + M G P+ V+ +
Sbjct: 313 ------RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA 366
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEA 491
+ A +L + Q +P + Y L+ ++ G +
Sbjct: 367 VHGMSGTALSVLGDI--KQNGIIPDVVSYTCLL------------------NSYGRSRQP 406
Query: 492 AIAHE---RMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSL 548
A E M KP+ YN LI + G + +A E++++M G P++ SV +L
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 549 IHALYYDRKNSEMGWVIRNTL-RSCNLN----DSELHQVLNEIEVKKC 591
+ A +K + V+ R NLN +S + +N E++K
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKA 514
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/521 (23%), Positives = 224/521 (42%), Gaps = 68/521 (13%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
+++A+ + EM + PD ETY+ALI + A+ L D M ++P+ TY +
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 126 LIDLLCT---WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
LI+ + W +A +V +M +G P + T+N ++AY S + +AL F M
Sbjct: 87 LINACGSSGNW--REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 144
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI--LPDDVTYSALIQALCLQGSL 240
+ PD ++N +I + G+ +AL++ EK PD VT+++++ ++G +
Sbjct: 145 AKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEI 204
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI---- 296
+F M+ + P+ +Y LM AY + G A + +++ G +PD V
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 297 -----------------------QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
+ P++VT+NALI S + EA+ I R M + G+
Sbjct: 265 LNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLL 392
P+ VS T+L + +K + +D + G++ + Y+S +
Sbjct: 325 KPNVVSVCTLLAACSR--------------SKKKVNVDTVLSAAQSRGINLNTAAYNSAI 370
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
Y ++K L + M + DSVT + I+G + + A L M + L
Sbjct: 371 GSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM---EDL 427
Query: 453 TMP-SYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
++P + +Y +++ C+Y S +G V EA +M +PD Y
Sbjct: 428 SIPLTKEVYSSVL--CAY-------------SKQGQVTEAESIFNQMKMAGCEPDVIAYT 472
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
++ + KA E++ EM G P + +L+ A
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 513
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 201/487 (41%), Gaps = 53/487 (10%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P ++ +I EA EV ++M G+ PD T+N ++ R A+
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIA--SGFLPSVATYNKFIT 162
++ M+ + P+ T+ +I L +A +FN M + P V T+ +
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
Y +E +F AM GL P++VSYNA++ + G AL + + + GI+P
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
D V+Y+ L+ + +A ++FL M + P+ TY L+ AY G + A +
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 283 DEMRHRGFLP---------------------DFVIQFSPS------LVTFNALIHGLCSL 315
+M G P D V+ + S +N+ I +
Sbjct: 317 RQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINA 376
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
+++A+ + + M + + D+V++ ++ G C++ + +A EM++ I L + Y
Sbjct: 377 AELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVY 436
Query: 376 ESLMEGLS----------------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
S++ S D + Y+S+L+ Y A K +L EM
Sbjct: 437 SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEA 496
Query: 414 NGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFK 473
NG PDS+ + NK S +L+ ++ + + + ++ + E+K
Sbjct: 497 NGIEPDSIACSALMRAFNKGGQPSNV-FVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 555
Query: 474 SAVGLVK 480
A+ L++
Sbjct: 556 RAIDLIQ 562
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 201/474 (42%), Gaps = 78/474 (16%)
Query: 134 WLDKAYKVF-----------------------------------NEMIASGFLPSVATYN 158
W+D+A +F ++M+ + PS +TYN
Sbjct: 26 WVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYN 85
Query: 159 KFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEK 218
I A SS +AL + M + G+ PDLV++N V+S + + KAL
Sbjct: 86 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 145
Query: 219 GILPDDVTYSALIQALCLQGSLPEAFDLFLEML--RGDVSPSNSTYTRLMYAYCLVGEFS 276
+ PD T++ +I L G +A DLF M R + P T+T +M+ Y + GE
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIE 205
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
+ + M G P++V++NAL+ AL +L + + G+ PD
Sbjct: 206 NCRAVFEAMVAEG--------LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPD 257
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
VSY +L + + R+ KA E+ + M ++ + VTY++L++ Y
Sbjct: 258 VVSYTCLLNSYGRSRQPGKAKEVFLMMRKE-------------RRKPNVVTYNALIDAYG 304
Query: 397 AQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPS 456
+ G + + ++ R+M ++G P+ V++ + + ++ + +L S+ + + +
Sbjct: 305 SNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS-RSKKKVNVDTVLSAAQSRGINLNT 363
Query: 457 YIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEA------------------AIAH-ER 497
+ + E + A+ L + + + ++ AI++ +
Sbjct: 364 AAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKE 423
Query: 498 MHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
M ++S+ VY+ ++ + ++G V +A ++ +M G P + + S++HA
Sbjct: 424 MEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 178/434 (41%), Gaps = 68/434 (15%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P +VS+ ++ A V+ ++ + G+ PD +Y L+ + R A
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 278
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E++ MR PN TY +LID + +L +A ++F +M G P+V + + A
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S++ + SA RG++ + +YN+ I + ELEKA+ + +K + D
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VT++ LI C PEA EM + + Y+ ++ AY G+ + A + ++
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 458
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M+ G PD ++ + +++H + E+ +A + M G+ PD+++ + ++
Sbjct: 459 MKMAGCEPD--------VIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
Query: 345 FGFCQIRELKKAYELKVEMDEKII-------------------W---------LDEYTYE 376
F + + + L M EK I W +D Y
Sbjct: 511 RAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY-LP 569
Query: 377 SLMEGLSDEV------------------------------TYSSLLNDYFAQGNMQKVFK 406
SL GL++++ TY+ LL A GN +K +
Sbjct: 570 SLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIE 629
Query: 407 LEREMTRNGYLPDS 420
+ M+ G P +
Sbjct: 630 VLEWMSGAGIQPSN 643
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 145/352 (41%), Gaps = 40/352 (11%)
Query: 157 YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
YN I + V+QA G+F M + PD +Y+A+I+ + G+ A+ + + +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
I P TY+ LI A G+ EA ++ +M V P T+ ++ AY ++S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS-- 334
A + M+ PD TFN +I+ L L + +AL + M E
Sbjct: 134 KALSYFELMKGAKVRPD--------TTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECR 185
Query: 335 PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLND 394
PD V++ +++ Y +K E++ + E L + V+Y++L+
Sbjct: 186 PDVVTFTSIMH----------LYSVKGEIENCRAVFEAMVAEGLKPNI---VSYNALMGA 232
Query: 395 YFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTM 454
Y G + ++ +NG +PD V+ +N + AK + L M +
Sbjct: 233 YAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKER--RK 290
Query: 455 PSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
P+ + Y+ LI+ + + G + EA +M +KP+
Sbjct: 291 PNVVTYNALID---------------AYGSNGFLAEAVEIFRQMEQDGIKPN 327
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 166/407 (40%), Gaps = 47/407 (11%)
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN +I + +++A + E + PD TY ALI A G A +L +ML
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
R ++PS STY L+ A G + A + +M G PD LVT N ++
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPD--------LVTHNIVLSA 125
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
S + +AL M + PD ++N +++ ++ + +A +L M EK
Sbjct: 126 YKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK----- 180
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
E D VT++S+++ Y +G ++ + M G P+ V+ +
Sbjct: 181 ------RAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA 234
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEA 491
+ A +L + Q +P + Y L+ ++ G +
Sbjct: 235 VHGMSGTALSVLGDI--KQNGIIPDVVSYTCLL------------------NSYGRSRQP 274
Query: 492 AIAHE---RMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSL 548
A E M KP+ YN LI + G + +A E++++M G P++ SV +L
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 334
Query: 549 IHALYYDRKNSEMGWVIRNTL-RSCNLN----DSELHQVLNEIEVKK 590
+ A +K + V+ R NLN +S + +N E++K
Sbjct: 335 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEK 381
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 148/307 (48%), Gaps = 13/307 (4%)
Query: 32 CKEKKVGETFGL-LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNA 90
C+ + G++F + ++ P + ++ L +EE K + EM ++PD T+N
Sbjct: 103 CRTMRKGDSFEIKYKLTPK--CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNT 160
Query: 91 LICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASG 149
L+ G CK+ ++ A + + G P+ TY S I C +D A+KVF EM +G
Sbjct: 161 LVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNG 220
Query: 150 FLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKAL 209
+ +Y + I ++++++AL + M + P++ +Y +I C G+ +A+
Sbjct: 221 CHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAM 280
Query: 210 EIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAY 269
+ + E GI PDD Y+ LIQ+ C +L EA L ML + P+ TY L+ +
Sbjct: 281 NLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF 340
Query: 270 CLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMP 329
C A L +M + +PD L+T+N LI G CS +D A +L M
Sbjct: 341 C-KKNVHKAMGLLSKMLEQNLVPD--------LITYNTLIAGQCSSGNLDSAYRLLSLME 391
Query: 330 EMGLSPD 336
E GL P+
Sbjct: 392 ESGLVPN 398
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 115/216 (53%), Gaps = 2/216 (0%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P ++ I C ++ ++ A +V +EM + G + +Y LI G+ + + + A+
Sbjct: 187 DPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALS 246
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
L +M+ PN RTY LID LC + +A +F +M SG P Y I ++
Sbjct: 247 LLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFC 306
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
S + +++A G+ M E GL P++++YNA+I FC+ + KA+ + ++ +E+ ++PD +
Sbjct: 307 SGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLI 365
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
TY+ LI C G+L A+ L M + P+ T
Sbjct: 366 TYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 14/205 (6%)
Query: 32 CKEKKVGETF---------GLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLA 82
C+ K+V F G R E VS+ +I L E ++++EA ++ +M
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNE---VSYTQLIYGLFEAKKIDEALSLLVKMKDDNCC 257
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKV 141
P+ TY LI +C A+ L+ QM G+ P++ Y LI C+ LD+A +
Sbjct: 258 PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGL 317
Query: 142 FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
M+ +G +P+V TYN I + + V +A+G+ S M E+ L PDL++YN +I+ C
Sbjct: 318 LEHMLENGLMPNVITYNALIKGF-CKKNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCS 376
Query: 202 DGELEKALEIKAETVEKGILPDDVT 226
G L+ A + + E G++P+ T
Sbjct: 377 SGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 122/291 (41%), Gaps = 45/291 (15%)
Query: 279 FHLHDEMR--HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
F L +EM+ + L D V SP + TFN L++G C L V EA + + + G PD
Sbjct: 133 FGLVEEMKRLYTEMLEDLV---SPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPD 189
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL-----SDEV----- 386
+Y + + G C+ +E+ A+++ EM + +E +Y L+ GL DE
Sbjct: 190 YFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLV 249
Query: 387 ------------TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
TY+ L++ G + L ++M+ +G PD V I
Sbjct: 250 KMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
Query: 435 TTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIA 494
T A G+L M+ + MP+ I Y+ LI+ A+GL+ + LV
Sbjct: 310 TLDEASGLLEHMLENG--LMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNLV------ 361
Query: 495 HERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSV 545
PD YN LI C GN++ AY + M G P+ +V
Sbjct: 362 ----------PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 32/270 (11%)
Query: 294 FVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
F I++ + +N L+ L V+E + M E +SPD ++NT++ G+C++ +
Sbjct: 112 FEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYV 171
Query: 354 KKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
VE + + WL + + D TY+S + + + + FK+ +EMT+
Sbjct: 172 -------VEAKQYVTWLIQAGCD------PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQ 218
Query: 414 NGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEF 472
NG + V+ I GL + A +L++M C P+ Y LI+ C +
Sbjct: 219 NGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCC--PNVRTYTVLIDALCGSGQK 276
Query: 473 KSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
A+ L K S G +KPD +Y +LI C +++A + +
Sbjct: 277 SEAMNLFKQMSESG----------------IKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 533 MVHYGFFPHMFSVLSLIHALYYDRKNSEMG 562
M+ G P++ + +LI + MG
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKNVHKAMG 350
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 169/348 (48%), Gaps = 17/348 (4%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMN-RKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
+ F +I LC+ R++EA+E++ M + P+ TYN LI G C+ + A E+
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
+M+ + PN T +++ +C L+ A F +M G +V TY I A S
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
VE+A+ + M E G SPD Y A+IS CQ A+ + + E G D + Y+
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
LI C + + + +++ +M + P + TY L+ + +F + ++MR
Sbjct: 551 MLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRED 610
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL----SPDAVSYNTVL 344
G P++ T+ A+I CS+ +DEAL + + +MGL +P+ V YN ++
Sbjct: 611 GL--------DPTVTTYGAVIDAYCSVGELDEALKLFK---DMGLHSKVNPNTVIYNILI 659
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL 392
F ++ +A LK EM K++ + TY +L + L+++ +LL
Sbjct: 660 NAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLL 707
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 153/338 (45%), Gaps = 24/338 (7%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLL-------RMEPYLVSFKGVIKELCEKERME 67
+ N +I G CK ++ E LL R P V++ +I C ++E
Sbjct: 371 IHFNTLIDGL-------CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLE 423
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
AKEVV M + P+ T N ++ GMC+ + AV + M G+ N TYM+LI
Sbjct: 424 TAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLI 483
Query: 128 DLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
C+ ++KA + +M+ +G P Y I+ R A+ + + E G S
Sbjct: 484 HACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
DL++YN +I FC EK E+ + ++G PD +TY+ LI E+ +
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDF-ESVER 602
Query: 247 FLEMLRGD-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
+E +R D + P+ +TY ++ AYC VGE A L +M + +P+ V +
Sbjct: 603 MMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHS-------KVNPNTVIY 655
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
N LI+ L +AL + M + P+ +YN +
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 210/500 (42%), Gaps = 92/500 (18%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA--- 104
P V I LC+ R A +++ ++ + + +NAL+ C RNM +
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLS--CLGRNMDISRMN 314
Query: 105 --VELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEM----IASGFLPSVAT- 156
V D++++R P+ T LI+ LC + +D+A +VF +M G + +
Sbjct: 315 DLVLKMDEVKIR---PDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSI 371
Query: 157 -YNKFITAYLSSERVEQALGIFSAMA-ERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
+N I R+++A + M E P+ V+YN +I +C+ G+LE A E+ +
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
E I P+ VT + ++ +C L A F++M + V + TY L++A C V
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 275 FSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS 334
A + +++M G PD I + ALI GLC + R +A+ ++ + E G S
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYY--------ALISGLCQVRRDHDAIRVVEKLKEGGFS 543
Query: 335 PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLN 393
D ++YN ++ FC +K YE+ +M++ EG D +TY++L++
Sbjct: 544 LDLLAYNMLIGLFCDKNNAEKVYEMLTDMEK--------------EGKKPDSITYNTLIS 589
Query: 394 DYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
+ + + V ++ +M +G P T G I+
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY----------------------- 626
Query: 454 MPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLL 513
CS E A+ L KD VN P+ +YN+L
Sbjct: 627 -------------CSVGELDEALKLFKDMGLHSKVN---------------PNTVIYNIL 658
Query: 514 IFDHCRRGNVNKAYEMYKEM 533
I + GN +A + +EM
Sbjct: 659 INAFSKLGNFGQALSLKEEM 678
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 179/428 (41%), Gaps = 41/428 (9%)
Query: 129 LLCTWWLDKAYKVFNEMIA--SGFLPSVATYNKFITAYLSSERV---EQALGIFSAMAER 183
LL +D A+KV +EM+ S F P+ T + + + ER+ E+ + + S +
Sbjct: 195 LLRNGLVDDAFKVLDEMLQKESVFPPNRITAD-IVLHEVWKERLLTEEKIIALISRFSSH 253
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
G+SP+ V IS C++ A +I ++ ++ + ++AL+ L +
Sbjct: 254 GVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRM 313
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
DL L+M + P T L+ C A + ++MR + VI+ +
Sbjct: 314 NDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADS--I 371
Query: 304 TFNALIHGLCSLERVDEALGILRGMP-EMGLSPDAVSYNTVLFGFCQIRELKKAYELKVE 362
FN LI GLC + R+ EA +L M E P+AV+YN ++ G+C+ +L+ A E+
Sbjct: 372 HFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 363 MDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
M E I + T +++ G+ + L NM VF ++ M + G + VT
Sbjct: 432 MKEDEIKPNVVTVNTIVGGM---CRHHGL--------NMAVVFFMD--MEKEGVKGNVVT 478
Query: 423 LGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKD 481
I+ + A +M+ + C P IY LI C A+ +V
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGC--SPDAKIYYALISGLCQVRRDHDAIRVV-- 534
Query: 482 FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPH 541
E++ D YN+LI C + N K YEM +M G P
Sbjct: 535 --------------EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Query: 542 MFSVLSLI 549
+ +LI
Sbjct: 581 SITYNTLI 588
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 87/170 (51%), Gaps = 2/170 (1%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
L+++ +I C+K E+ E++ +M ++G PD TYN LI K ++ + +
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEM-IASGFLPSVATYNKFITAYLSS 167
QMR GL P TY ++ID C+ LD+A K+F +M + S P+ YN I A+
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKL 665
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
QAL + M + + P++ +YNA+ + + E L++ E VE
Sbjct: 666 GNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 134/336 (39%), Gaps = 51/336 (15%)
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGD-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+ ++ L G + +AF + EML+ + V P N ++ LH+ +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIV--------------LHEVWK 234
Query: 287 HRGFLPDFVIQF---------SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
R + +I SP+ V I LC R + A IL + + +A
Sbjct: 235 ERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEA 294
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFA 397
+N +L + ++ + +L ++MDE I D T L+ L L + F
Sbjct: 295 PPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEAL-EVFE 353
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM-ISSQCLTMPS 456
Q + +R N DS+ I+GL K A+ +L+RM + +C+ P+
Sbjct: 354 Q------MRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCV--PN 405
Query: 457 YIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIF 515
+ Y+ LI+ C + ++A +V RM +KP+ N ++
Sbjct: 406 AVTYNCLIDGYCRAGKLETAKEVVS----------------RMKEDEIKPNVVTVNTIVG 449
Query: 516 DHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
CR +N A + +M G ++ + ++LIHA
Sbjct: 450 GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/520 (23%), Positives = 223/520 (42%), Gaps = 58/520 (11%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F +++ + + A EV+ + +G N + + V + ++Y +M
Sbjct: 151 FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMD 210
Query: 113 VRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
G N T+ +I C L +A VF M+ G P+V ++N I + +
Sbjct: 211 SLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 172 ---QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
Q LG M+ +SP+ V+YN+VI+ FC+ G L+ A I+ + V+ G+ ++ TY
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
AL+ A GS EA L EM + + Y ++Y + G+ A + +M +
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
D +F+ ++V + GLC V EA+ R + E L D V +NT++ F
Sbjct: 391 NMQID---RFTQAIV-----VRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKL 407
+ D+K+ D+ L++GLS D +++ +L++ Y +G +++ ++
Sbjct: 443 R--------------DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEI 488
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENC 467
M + + V +NGL+K+ A+ ++ + + + Y+TL+
Sbjct: 489 YDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVV------NAMEIKDIVTYNTLLNE- 541
Query: 468 SYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDG------AVYNLLIFDHCRRG 521
K+ G V EA +M K DG +N++I C+ G
Sbjct: 542 ---SLKT-----------GNVEEADDILSKMQ----KQDGEKSVSLVTFNIMINHLCKFG 583
Query: 522 NVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEM 561
+ KA E+ K MV G P + +LI + R ++
Sbjct: 584 SYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKV 623
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 212/460 (46%), Gaps = 37/460 (8%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
+F VI C++ ++ EA V M + G+ P+ ++N +I G CK +M A++L +M
Sbjct: 220 TFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKM 279
Query: 112 RVRG---LSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
+ +SPN TY S+I+ C LD A ++ +M+ SG + TY + AY +
Sbjct: 280 GMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRA 339
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
++AL + M +GL + V YN+++ +G++E A+ + + K + D T
Sbjct: 340 GSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQ 399
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+ +++ LC G + EA + ++ + + LM+ + + + A + M
Sbjct: 400 AIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLV 459
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
+G D ++F LI G +++ AL I GM +M + + V YN+++ G
Sbjct: 460 QGLSLD--------AISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGL 511
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKL 407
+ R + A E V E + D VTY++LLN+ GN+++ +
Sbjct: 512 SK-RGMAGAAEAVVNAME----------------IKDIVTYNTLLNESLKTGNVEEADDI 554
Query: 408 EREMTR-NGYLPDS-VTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
+M + +G S VT + IN L K + AK +L M+ +P I Y TLI
Sbjct: 555 LSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERG--VVPDSITYGTLIT 612
Query: 466 NCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKP 505
+ S + V + D+ L+ + HE ++ V+P
Sbjct: 613 SFSKHRSQEKVVELHDY----LILQGVTPHEHIYLSIVRP 648
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 181/416 (43%), Gaps = 60/416 (14%)
Query: 13 HMVRMNVMIRGFATESVMSCKEKKVGETFGLLR---MEPYLVSFKGVIKELCEKERMEEA 69
++V N+MI G M + +G+ G++ + P V++ VI C+ R++ A
Sbjct: 252 NVVSFNMMIDGACKTGDMRFALQLLGK-MGMMSGNFVSPNAVTYNSVINGFCKAGRLDLA 310
Query: 70 KEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL 129
+ + +M + G+ + TY AL+ + + A+ L D+M +GL N Y S++
Sbjct: 311 ERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIV-- 368
Query: 130 LCTWWL------DKAYKVFNEMIASG---------------------------------- 149
+WL + A V +M +
Sbjct: 369 ---YWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEK 425
Query: 150 -FLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
+ + +N + ++ +++ A I +M +GLS D +S+ +I + ++G+LE+A
Sbjct: 426 KLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERA 485
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
LEI ++ + V Y++++ L +G A + M D+ TY L+
Sbjct: 486 LEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDI----VTYNTLLNE 541
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
G A + +M+ + + S SLVTFN +I+ LC ++A +L+ M
Sbjct: 542 SLKTGNVEEADDILSKMQKQDG------EKSVSLVTFNIMINHLCKFGSYEKAKEVLKFM 595
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD 384
E G+ PD+++Y T++ F + R +K EL + + + E+ Y S++ L D
Sbjct: 596 VERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLLD 651
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/543 (22%), Positives = 210/543 (38%), Gaps = 114/543 (20%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P L ++ ++ +LC R+ +A ++V +M +G PD T+ LI G C++R + A ++
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 108 YDQMRVRGLSPNERT----------------------------------------YMSLI 127
+D+MRV G+ PN T + +L+
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 128 DLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
D +C + + +++ M + Y I + R A I M +GL
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC----------- 235
P SYNA+I C+DG +A ++ E E P + TY L+++LC
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 236 -------------------LQG-----SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
L+G + E ++ + ML+GD P T ++ C
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCK 459
Query: 272 VGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL-RGMPE 330
+G A + D+M F +P VT N ++ GL + R +EAL +L R MPE
Sbjct: 460 MGRVDDAMKVLDDMMTGKFC-------APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPE 512
Query: 331 MGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSS 390
+ P V+YN V+ G ++ + +A + ++++ + D TY +++GL
Sbjct: 513 NKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLC------- 565
Query: 391 LLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQ 450
+ K ++ D+ F+ GL + S A L + S
Sbjct: 566 ------VTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSG 619
Query: 451 CLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVY 510
+P+ + Y+T+I C S GL EA E M PD +
Sbjct: 620 --AIPNVVCYNTVIAEC---------------SRSGLKREAYQILEEMRKNGQAPDAVTW 662
Query: 511 NLL 513
+L
Sbjct: 663 RIL 665
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 206/530 (38%), Gaps = 61/530 (11%)
Query: 57 IKELCEKERM-EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
I +C R +EA ++ + +G PD +++I +C A + G
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 116 LSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIA--SGFLPSVATYNKFITAYLSSERVEQ 172
P+ERT +I LL + V + +I F+PS+ YN+ + + RV
Sbjct: 121 FIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVID 180
Query: 173 ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
A + M RG PD+V++ +I +C+ ELE A ++ E GI P+ +T S LI
Sbjct: 181 AHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIG 240
Query: 233 ALCLQGSLPEAFDLFLEML-----RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+ L E+ D S + + L+ + C G F+ F + + M
Sbjct: 241 GFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENM-- 298
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
++F+ + +I LC R A I+ M GL P SYN ++ G
Sbjct: 299 -SLCESVNVEFA-----YGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGL 352
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV--------------------- 386
C+ +AY+L E E + EYTY+ LME L E+
Sbjct: 353 CKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRT 412
Query: 387 -TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR 445
Y+ L N ++ + M + PD TL INGL K A +L
Sbjct: 413 RIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDD 472
Query: 446 MISSQCLTMPSYIIYDTL---------------IENCSYVEFKSAVGLVK-DFSTRGLV- 488
M++ + P + +T+ + N E K G+V + RGL
Sbjct: 473 MMTGK-FCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFK 531
Query: 489 ----NEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
+EA ++ SV D Y ++I C V+ A + + +++
Sbjct: 532 LHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVI 581
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 165/397 (41%), Gaps = 48/397 (12%)
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ-DGELEKALEIKAETVEKGILPD 223
L S+ VE A R D + I C ++AL I +G PD
Sbjct: 30 LKSDDVEGEDDAIEAEDRRRSVTDRAYWRRRIHSICAVRRNPDEALRILDGLCLRGYRPD 89
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST----YTRLMYAYCLVGEFSMAF 279
+ S++I +LC G EA FL L P T RL+Y+ V +
Sbjct: 90 SLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVI- 148
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
HR L F +F PSL +N L++ LC++ RV +A ++ M G PD V+
Sbjct: 149 -------HR--LIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVT 199
Query: 340 YNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQG 399
+ T++ G+C+IREL+ A+++ EM ++ + + +T S L+ +
Sbjct: 200 FTTLIGGYCEIRELEVAHKVFDEM--RVCGIR-----------PNSLTLSVLIGGFLKMR 246
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
+++ KL +E+ + + TS+ ++ S C I
Sbjct: 247 DVETGRKLMKELWEY---------------MKNETDTSMKAAAFANLVDSMCREGYFNDI 291
Query: 460 YDTLIEN---CSYVEFKSAVGLVKDFSTRGLVNE-AAIAHERMHNMSVKPDGAVYNLLIF 515
++ + EN C V + A G + D R N AA M + +KP YN +I
Sbjct: 292 FE-IAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIH 350
Query: 516 DHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
C+ G +AY++ +E + FFP ++ L+ +L
Sbjct: 351 GLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESL 387
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 198/423 (46%), Gaps = 32/423 (7%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P+ S +++ L +++++A ++R M G PD TYN +I +CK ++ A+ L
Sbjct: 137 PHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVL 196
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYN---KFITA 163
+ M + G P+ TY ++I + + ++A + + + + +G P + TY + +
Sbjct: 197 LEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCR 256
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
Y S R A+ + MA G PD+V+YN++++ C+ G LE+ + + G+ +
Sbjct: 257 YCGSAR---AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELN 313
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
VTY+ L+ +LC E ++ M + P+ TY L+ C S A
Sbjct: 314 TVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFY 373
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
+M + LPD +VT+N ++ + VD+A+ +L + P ++YN+V
Sbjct: 374 QMLEQKCLPD--------IVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSV 425
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM-Q 402
+ G + +KKA EL +M + I+ D+ T SL+ G F + N+ +
Sbjct: 426 IDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYG--------------FCRANLVE 471
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
+ ++ +E + G T + I GL KK +A ++ M++ C P IY
Sbjct: 472 EAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGC--KPDETIYTA 529
Query: 463 LIE 465
+++
Sbjct: 530 IVK 532
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 169/389 (43%), Gaps = 22/389 (5%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
++ LC ++ +A ++V M R P + + L+ G+ ++ + A+ + M + G
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 116 LSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
P+ TY +I LC + A + +M SG P V TYN I EQA+
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
+ + G P +++Y ++ C+ +A+E+ + +G PD VTY++L+
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 235 CLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDF 294
C +G+L E + +L + + TY L+++ C + + + M +
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM--------Y 341
Query: 295 VIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELK 354
+ P+++T+N LI+GLC + A+ M E PD V+YNTVL + +
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 355 KAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
A EL + TY S+++GL+ +G M+K +L +M
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLA-------------KKGLMKKALELYHQMLDA 448
Query: 415 GYLPDSVTLGVFINGLNKKATTSIAKGIL 443
G PD +T I G + A +L
Sbjct: 449 GIFPDDITRRSLIYGFCRANLVEEAGQVL 477
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/476 (23%), Positives = 195/476 (40%), Gaps = 46/476 (9%)
Query: 73 VREMNRKGLAPDC-------ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
V+ M + GL+ D ET N ++ +C + A +L + M P+ + +
Sbjct: 85 VKPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSN 144
Query: 126 LIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
L+ L LDKA + M+ SG +P TYN I + AL + M+ G
Sbjct: 145 LVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSG 204
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
PD+++YN VI G E+A+ + ++ G P +TY+ L++ +C A
Sbjct: 205 SPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAI 264
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
++ +M P TY L+ C G + + G + VT
Sbjct: 265 EVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGL--------ELNTVT 316
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+N L+H LCS E DE IL M + P ++YN ++ G C+ R L +A + +M
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 365 EKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
E+ + L D VTY+++L +G + +L + P +T
Sbjct: 377 EQ-------------KCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYN 423
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFST 484
I+GL KK G++ + + +Y +++ + + + L+ F
Sbjct: 424 SVIDGLAKK-------GLMKKALE----------LYHQMLDAGIFPDDITRRSLIYGFCR 466
Query: 485 RGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
LV EA + N G+ Y L+I C++ + A E+ + M+ G P
Sbjct: 467 ANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKP 522
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 171/417 (41%), Gaps = 46/417 (11%)
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
T N+ + S+ ++ A + MA P S + ++ + +L+KA+ I
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYT---RLMYAYCLV 272
V G +PD +TY+ +I LC +G + A L +M P TY R M+ Y
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY--- 222
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
G A + G P ++T+ L+ +C A+ +L M G
Sbjct: 223 GNAEQAIRFWKDQLQNG--------CPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEG 274
Query: 333 LSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSL 391
PD V+YN+++ C+ L++ + + L GL + VTY++L
Sbjct: 275 CYPDIVTYNSLVNYNCRRGNLEEVASVIQHI--------------LSHGLELNTVTYNTL 320
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC 451
L+ + +V ++ M + Y P +T + INGL K S A +M+ +C
Sbjct: 321 LHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKC 380
Query: 452 LTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
L P + Y+T++ S G+V++A + N P YN
Sbjct: 381 L--PDIVTYNTVL---------------GAMSKEGMVDDAIELLGLLKNTCCPPGLITYN 423
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNT 568
+I ++G + KA E+Y +M+ G FP + SLI+ E G V++ T
Sbjct: 424 SVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKET 480
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 125/292 (42%), Gaps = 25/292 (8%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +V++ ++ C + +EE V++ + GL + TYN L+ +C E+
Sbjct: 277 PDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEI 336
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+ M P TY LI+ LC L +A F +M+ LP + TYN + A
Sbjct: 337 LNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSK 396
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
V+ A+ + + P L++YN+VI + G ++KALE+ + ++ GI PDD+T
Sbjct: 397 EGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDIT 456
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+LI C + EA + E STY ++ C E MA + + M
Sbjct: 457 RRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIML 516
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAV 338
G PD I + I++G+ EMG+ +AV
Sbjct: 517 TGGCKPDETIYTA------------------------IVKGVEEMGMGSEAV 544
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 167/375 (44%), Gaps = 47/375 (12%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P + F +I E +++A ++ +M G P T+N LI G K+ + +
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 106 ELYDQM-RVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKF--- 160
L D M R L PN+RT L+ C +++A+ + +M + G P V T+N
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKA 504
Query: 161 ---------------------------------ITAYLSSERVEQALGIFSAMAERGLSP 187
+ Y ++E+AL F M E G+ P
Sbjct: 505 YARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHP 564
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
+L +N++I F +++ E+ E G+ PD VT+S L+ A G + +++
Sbjct: 565 NLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIY 624
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
+ML G + P ++ L Y GE A + ++MR G P+ VI +
Sbjct: 625 TDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVI--------YTQ 676
Query: 308 LIHGLCSLERVDEALGILRGMPEM-GLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
+I G CS + +A+ + + M + GLSP+ +Y T+++GF + ++ KA EL +M+ K
Sbjct: 677 IISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGK 736
Query: 367 IIWLDEYTYESLMEG 381
+ T + + +G
Sbjct: 737 NVVPTRKTMQLIADG 751
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 191/434 (44%), Gaps = 60/434 (13%)
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A+ +FN +I G PS+ TY +TA + L + S + + GL PD + +NA+I
Sbjct: 337 EAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAII 396
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD-V 255
+ + G L++A++I + E G P T++ LI+ G L E+ L MLR + +
Sbjct: 397 NASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEML 456
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI------------------- 296
P++ T L+ A+C + A+++ +M+ G PD V
Sbjct: 457 QPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAED 516
Query: 297 ---------QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
+ P++ T +++G C +++EAL M E+G+ P+ +N+++ GF
Sbjct: 517 MIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGF 576
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKL 407
I ++ E+ + ++E+ + D VT+S+L+N + + G+M++ ++
Sbjct: 577 LNINDMDGVGEV-------VDLMEEFGVK------PDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN- 466
+M G PD + G + A+ IL +M + P+ +IY +I
Sbjct: 624 YTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQM--RKFGVRPNVVIYTQIISGW 681
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
CS E K A+ + K G+V + P+ Y LI+ KA
Sbjct: 682 CSAGEMKKAMQVYKKMC--GIV-------------GLSPNLTTYETLIWGFGEAKQPWKA 726
Query: 527 YEMYKEMVHYGFFP 540
E+ K+M P
Sbjct: 727 EELLKDMEGKNVVP 740
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 185/408 (45%), Gaps = 25/408 (6%)
Query: 60 LCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPN 119
L E+ R +EA + + +G P TY L+ + + ++ + L ++ GL P+
Sbjct: 329 LIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPD 388
Query: 120 ERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
+ ++I+ + LD+A K+F +M SG P+ +T+N I Y ++E++ +
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 179 AM-AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQ 237
M + L P+ + N ++ +C ++E+A I + G+ PD VT++ L +A
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 238 GSLPEAFDLFL-EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI 296
GS A D+ + ML V P+ T ++ YC G+ A M+ G
Sbjct: 509 GSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELG------- 561
Query: 297 QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
P+L FN+LI G ++ +D ++ M E G+ PD V+++T++ + + ++K+
Sbjct: 562 -VHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 357 YELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
E+ +M E I D + + L +G Y G +K ++ +M + G
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKG-------------YARAGEPEKAEQILNQMRKFGV 667
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
P+ V I+G A + +M L+ P+ Y+TLI
Sbjct: 668 RPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLS-PNLTTYETLI 714
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 112/231 (48%), Gaps = 2/231 (0%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
+++P + + ++ CE+ +MEEA M G+ P+ +N+LI G + +M
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
E+ D M G+ P+ T+ +L++ + + + +++ +M+ G P + ++
Sbjct: 586 GEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKG 645
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI-KAETVEKGILP 222
Y + E+A I + M + G+ P++V Y +IS +C GE++KA+++ K G+ P
Sbjct: 646 YARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSP 705
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
+ TY LI +A +L +M +V P+ T + + +G
Sbjct: 706 NLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 8/199 (4%)
Query: 32 CKEKKVGETFGL------LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C+E K+ E L + P L F +IK M+ EVV M G+ PD
Sbjct: 542 CEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDV 601
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNE 144
T++ L+ V +M E+Y M G+ P+ + L +KA ++ N+
Sbjct: 602 VTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE-RGLSPDLVSYNAVISKFCQDG 203
M G P+V Y + I+ + S+ +++A+ ++ M GLSP+L +Y +I F +
Sbjct: 662 MRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAK 721
Query: 204 ELEKALEIKAETVEKGILP 222
+ KA E+ + K ++P
Sbjct: 722 QPWKAEELLKDMEGKNVVP 740
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 132/518 (25%), Positives = 212/518 (40%), Gaps = 79/518 (15%)
Query: 17 MNVMIRGFATESVMSCKEKKVGET----FGLLRMEPYLVSFKGVIKELCEKERMEEAKEV 72
+ +++RGF E M E + E FGL + + VI C+ + EA
Sbjct: 286 LGMVVRGFCNEMKMKAAESVIIEMEEIGFGL-----DVYACLAVIDRYCKNMNLPEALGF 340
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT 132
+ +M KGL +C + ++ CK+ L A+E + + R + + Y D L
Sbjct: 341 LDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSK 400
Query: 133 WW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+++A+++ EM G +P V Y I Y +V AL + M G+SPDL++
Sbjct: 401 LGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLIT 460
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM- 250
YN ++S ++G E+ LEI +G P+ VT S +I+ LC + EA D F +
Sbjct: 461 YNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE 520
Query: 251 ---------------------------LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+R + S Y +L ++ C+ G A HD
Sbjct: 521 QKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKA---HD 577
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
++ + P +I C L V EA + M E GL PD +Y +
Sbjct: 578 VLKKMS-----AYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIM 632
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF------- 396
+ +C++ EL+KA L +M ++ I D VTY+ LL+ Y
Sbjct: 633 IHTYCRLNELQKAESLFEDMKQRGIK-------------PDVVTYTVLLDRYLKLDPEHH 679
Query: 397 ----AQGNM--QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQ 450
QG + +K ++ RE + G D V V I+ K A + RMI S
Sbjct: 680 ETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSG 739
Query: 451 CLTMPSYIIYDTLIENC---SYVEFKSAVGLVKDFSTR 485
P + Y TLI + Y++ AV LV + S +
Sbjct: 740 --LEPDMVAYTTLISSYFRKGYIDM--AVTLVTELSKK 773
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 180/393 (45%), Gaps = 57/393 (14%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
R+EEA E+++EM +G+ PD Y LI G C ++ A++L D+M G+SP+ TY
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYN 462
Query: 125 SLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
L+ L ++ +++ M A G P+ T + I + +V++A FS++ ++
Sbjct: 463 VLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALE--IKAE-TVEKGILPDDVTYSALIQALCLQGSL 240
P+ + + + +C+ G +KA + ++ E + K + Y L +LC++G L
Sbjct: 523 --CPE--NKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSV------YIKLFFSLCIEGYL 572
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+A D+ +M V P S +++ A+C + A L D M RG +PD
Sbjct: 573 EKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD------- 625
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF----------CQI 350
L T+ +IH C L + +A + M + G+ PD V+Y +L + C +
Sbjct: 626 -LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSV 684
Query: 351 RE---LKKAYELKVEMDEKIIWLDEYTYESLME---------------------GLS-DE 385
+ +KA E+ E I LD Y L++ GL D
Sbjct: 685 QGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDM 744
Query: 386 VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLP 418
V Y++L++ YF +G + L E+++ +P
Sbjct: 745 VAYTTLISSYFRKGYIDMAVTLVTELSKKYNIP 777
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 132/550 (24%), Positives = 209/550 (38%), Gaps = 68/550 (12%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV----ELYDQM 111
V+K LC K +EEA ++ E N Y I G+C AV EL D+
Sbjct: 222 VVKALCRKGNLEEAAMLLIE-NESVFG-----YKTFINGLCVTGETEKAVALILELIDRK 275
Query: 112 RVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
+ G M + + A V EM GF V I Y + +
Sbjct: 276 YLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLP 335
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
+ALG M +GL + V + ++ +C+ +ALE E + I D V Y+
Sbjct: 336 EALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAF 395
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
AL G + EAF+L EM + P YT L+ YCL G+ A L DEM G
Sbjct: 396 DALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGM- 454
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
SP L+T+N L+ GL +E L I M G P+AV+ + ++ G C R
Sbjct: 455 -------SPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFAR 507
Query: 352 ELKKAYELKVEMDEKI-------------IWLDEYTYESL--MEGLSDEVTYSSLLNDYF 396
++K+A + +++K L + Y++ +E + Y L
Sbjct: 508 KVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLC 567
Query: 397 AQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPS 456
+G ++K + ++M+ P G I K A+ + M+ + P
Sbjct: 568 IEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLI--PD 625
Query: 457 YIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAI---------------------- 493
Y +I C E + A L +D RG+ +
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQ 685
Query: 494 -------AHERMHNMS---VKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMF 543
A E + S + D Y +LI C+ N+ +A E++ M+ G P M
Sbjct: 686 GEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMV 745
Query: 544 SVLSLIHALY 553
+ +LI + +
Sbjct: 746 AYTTLISSYF 755
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 120/528 (22%), Positives = 219/528 (41%), Gaps = 67/528 (12%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
+EA +V+ + R D + N L+ M + + + L+ Q++ GL NE TY +
Sbjct: 163 DEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIV 222
Query: 127 IDLLC------------------------------TWWLDKAYKVFNEMIASGFLPS--- 153
+ LC T +KA + E+I +L
Sbjct: 223 VKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDL 282
Query: 154 VATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKA 213
A + + + +++ A + M E G D+ + AVI ++C++ L +AL
Sbjct: 283 RAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLD 342
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
+ + KG+ + V S ++Q C EA + F E ++ Y A +G
Sbjct: 343 KMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLG 402
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
AF L EM+ RG +PD ++ + LI G C +V +AL ++ M G+
Sbjct: 403 RVEEAFELLQEMKDRGIVPD--------VINYTTLIDGYCLQGKVVDALDLIDEMIGNGM 454
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL--SDEVTYSSL 391
SPD ++YN ++ G + ++ E+ M + + T ++EGL + +V +
Sbjct: 455 SPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAE- 513
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTS-------IAKGILL 444
D+F+ LE++ N S G GL+KKA + + K + +
Sbjct: 514 --DFFSS--------LEQKCPEN---KASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYI 560
Query: 445 RMISSQCLTMPSYIIYDTLIENCSY-VE-FKSAVG-LVKDFSTRGLVNEAAIAHERMHNM 501
++ S C+ +D L + +Y VE +S G ++ F V EA + + M
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER 620
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
+ PD Y ++I +CR + KA ++++M G P + + L+
Sbjct: 621 GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 60 LCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPN 119
LC + +E+A +V+++M+ + P +I CK+ N+ A L+D M RGL P+
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPD 625
Query: 120 ERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYL------------- 165
TY +I C L KA +F +M G P V TY + YL
Sbjct: 626 LFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQ 685
Query: 166 ---SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ + L FSA G+ D+V Y +I + C+ LE+A E+ ++ G+ P
Sbjct: 686 GEVGKRKASEVLREFSAA---GIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEP 742
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
D V Y+ LI + +G + A L E+ + PS S
Sbjct: 743 DMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSES 780
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 197/484 (40%), Gaps = 72/484 (14%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIAS---GF--------- 150
A+ Q++ G+SPN Y +L+ +L TW LD K V E+I + GF
Sbjct: 73 ALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVMDLIEVI 132
Query: 151 ----------LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC 200
+ + AY+S ++A + D+ + N ++++
Sbjct: 133 GEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMT 192
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
+ G++ + + + + G+ ++ TY+ +++ALC +G+L EA L +E + S
Sbjct: 193 EFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NESVF 246
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
Y + C+ GE A L E+ R +L ++ ++ G C+ ++
Sbjct: 247 GYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLR-----AVLGMVVRGFCNEMKMKA 301
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
A ++ M E+G D + V+ +C+ + + E + +LD+ L +
Sbjct: 302 AESVIIEMEEIGFGLDVYACLAVIDRYCK----------NMNLPEALGFLDKM----LGK 347
Query: 381 GLSDEVTYSSLLNDYFAQGNM----QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATT 436
GL SL+ + + +M + FK R+M N +L D V V + L+K
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDM--NIFL-DRVCYNVAFDALSKLGRV 404
Query: 437 SIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHE 496
A +L M +P I Y TLI+ + +G V +A +
Sbjct: 405 EEAFELLQEMKDRG--IVPDVINYTTLIDG---------------YCLQGKVVDALDLID 447
Query: 497 RMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDR 556
M + PD YN+L+ R G+ + E+Y+ M G P+ + +I L + R
Sbjct: 448 EMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFAR 507
Query: 557 KNSE 560
K E
Sbjct: 508 KVKE 511
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R+EP +I C+ + EA+ + M +GL PD TY +I C++ + A
Sbjct: 586 RVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKA 645
Query: 105 VELYDQMRVRGLSPNERTYMSLIDL----------LCTWWLD----KAYKVFNEMIASGF 150
L++ M+ RG+ P+ TY L+D C+ + KA +V E A+G
Sbjct: 646 ESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGI 705
Query: 151 LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE 210
V Y I +EQA +F M + GL PD+V+Y +IS + + G ++ A+
Sbjct: 706 GLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVT 765
Query: 211 IKAETVEKGILPDDVTYSALIQALCLQG 238
+ E +K +P + ++ A +++ L+
Sbjct: 766 LVTELSKKYNIPSE-SFEAAVKSAALKA 792
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 22/369 (5%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F + K ++ A + +M G P E+ NA + + + A+ Y +MR
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 113 VRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
+SPN T ++ C + LDK ++ +M GF + +YN I + +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
AL + + M + GL P++V++N +I FC+ +L++A ++ E + P+ VTY+ LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
QG AF + +M+ + TY L++ C + A E+ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
P+ TF+ALI G C + D + + M G P+ ++N ++ FC+
Sbjct: 411 PN--------SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
+ A ++ EM + I LD T + GL QG Q V KL +EM
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKH-------------QGKDQLVKKLLQEM 509
Query: 412 TRNGYLPDS 420
+L +S
Sbjct: 510 EGKKFLQES 518
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 167/366 (45%), Gaps = 23/366 (6%)
Query: 2 KLLRATLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELC 61
++ + K+F H+ + AT++ M K+ +G L P + S + L
Sbjct: 169 RVFDSLFKTFAHLKKFRN-----ATDTFMQMKD------YGFL---PTVESCNAYMSSLL 214
Query: 62 EKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
+ R++ A REM R ++P+ T N ++ G C+ + +EL M G +
Sbjct: 215 GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 122 TYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
+Y +LI C L A K+ N M SG P+V T+N I + + ++++A +F M
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
++P+ V+YN +I+ + Q G+ E A + V GI D +TY+ALI LC Q
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+A E+ + ++ P++ST++ L+ C+ F L+ M G P
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG--------CHP 446
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELK 360
+ TFN L+ C E D A +LR M + D+ + + V G + + +L
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLL 506
Query: 361 VEMDEK 366
EM+ K
Sbjct: 507 QEMEGK 512
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 167/364 (45%), Gaps = 30/364 (8%)
Query: 88 YNALICGMCKVRNMLCAVELYDQMRVRGLSPNERT---YMSLIDLLCTWWLDKAYKVFNE 144
+++L ++ A + + QM+ G P + YMS LL +D A + + E
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS--SLLGQGRVDIALRFYRE 228
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M P+ T N ++ Y S ++++ + + M G VSYN +I+ C+ G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L AL++K + G+ P+ VT++ LI C L EA +F EM +V+P+ TY
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ Y G+ MAF +++M G D ++T+NALI GLC + +A
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQF 400
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG--L 382
++ + + L P++ +++ ++ G C + + +EL Y+S++
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL---------------YKSMIRSGCH 445
Query: 383 SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGI 442
+E T++ L++ + + ++ REM R DS T+ NGL + + K +
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKL 505
Query: 443 LLRM 446
L M
Sbjct: 506 LQEM 509
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 164/397 (41%), Gaps = 74/397 (18%)
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
++++ F + A + + + G LP + +A + +L QG + A + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
R +SP+ T +M YC G+ L +M GF + V++N LI G
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF--------RATDVSYNTLIAG 282
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
C + AL + M + GL P+ V++NT++ GFC+ +L++A ++ EM K + +
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM--KAVNVA 340
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
T VTY++L+N Y QG+ + F+ +M NG D +T I GL
Sbjct: 341 PNT-----------VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEA 491
K+A T + A VK+ LV
Sbjct: 390 KQAKT------------------------------------RKAAQFVKELDKENLV--- 410
Query: 492 AIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
P+ + ++ LI C R N ++ +E+YK M+ G P+ + L+ A
Sbjct: 411 -------------PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 552 LYYDRKNSEMGWVIRNTL-RSCNLNDSELHQVLNEIE 587
+ V+R + RS L+ +HQV N ++
Sbjct: 458 FCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 494
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 158/376 (42%), Gaps = 30/376 (7%)
Query: 126 LIDLLCTWWLDKAYKVFNEMIAS----GFLPSVATYNKFITAYLSSERVEQALGIFSAMA 181
L D+L +D KVF+ ++ S P V ++ + ++ A F M
Sbjct: 138 LRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTFMQMK 195
Query: 182 ERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLP 241
+ G P + S NA +S G ++ AL E I P+ T + ++ C G L
Sbjct: 196 DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD 255
Query: 242 EAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
+ +L +M R ++ +Y L+ +C G S A L + M G P+
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL--------QPN 307
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
+VTFN LIHG C ++ EA + M + ++P+ V+YNT++ G+ Q + + A+
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
+M I D TY +L+ GL Q +K + +E+ + +P+S
Sbjct: 368 DMVCNGIQRDILTYNALIFGLC-------------KQAKTRKAAQFVKELDKENLVPNSS 414
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVK 480
T I G + + MI S C P+ ++ L+ C +F A +++
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGC--HPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 481 DFSTRGLVNEAAIAHE 496
+ R + ++ H+
Sbjct: 473 EMVRRSIPLDSRTVHQ 488
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 131/295 (44%), Gaps = 9/295 (3%)
Query: 8 LKSFRHMVRMNVMIRGFATESVMS--CKEKKVGETFGLLRMEPYL------VSFKGVIKE 59
L+ +R M R + + VMS C+ K+ + LL+ L VS+ +I
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 60 LCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPN 119
CEK + A ++ M + GL P+ T+N LI G C+ + A +++ +M+ ++PN
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 120 ERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
TY +LI+ + A++ + +M+ +G + TYN I + +A
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
+ + L P+ +++A+I C ++ E+ + G P++ T++ L+ A C
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
A + EM+R + + T ++ G+ + L EM + FL +
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 22/369 (5%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F + K ++ A + +M G P E+ NA + + + A+ Y +MR
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 113 VRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
+SPN T ++ C + LDK ++ +M GF + +YN I + +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
AL + + M + GL P++V++N +I FC+ +L++A ++ E + P+ VTY+ LI
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
QG AF + +M+ + TY L++ C + A E+ +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
P+ TF+ALI G C + D + + M G P+ ++N ++ FC+
Sbjct: 411 PN--------SSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
+ A ++ EM + I LD T + GL QG Q V KL +EM
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKH-------------QGKDQLVKKLLQEM 509
Query: 412 TRNGYLPDS 420
+L +S
Sbjct: 510 EGKKFLQES 518
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 167/366 (45%), Gaps = 23/366 (6%)
Query: 2 KLLRATLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELC 61
++ + K+F H+ + AT++ M K+ +G L P + S + L
Sbjct: 169 RVFDSLFKTFAHLKKFRN-----ATDTFMQMKD------YGFL---PTVESCNAYMSSLL 214
Query: 62 EKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
+ R++ A REM R ++P+ T N ++ G C+ + +EL M G +
Sbjct: 215 GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 122 TYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
+Y +LI C L A K+ N M SG P+V T+N I + + ++++A +F M
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
++P+ V+YN +I+ + Q G+ E A + V GI D +TY+ALI LC Q
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+A E+ + ++ P++ST++ L+ C+ F L+ M G P
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSG--------CHP 446
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELK 360
+ TFN L+ C E D A +LR M + D+ + + V G + + +L
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLL 506
Query: 361 VEMDEK 366
EM+ K
Sbjct: 507 QEMEGK 512
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 167/364 (45%), Gaps = 30/364 (8%)
Query: 88 YNALICGMCKVRNMLCAVELYDQMRVRGLSPNERT---YMSLIDLLCTWWLDKAYKVFNE 144
+++L ++ A + + QM+ G P + YMS LL +D A + + E
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS--SLLGQGRVDIALRFYRE 228
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M P+ T N ++ Y S ++++ + + M G VSYN +I+ C+ G
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
L AL++K + G+ P+ VT++ LI C L EA +F EM +V+P+ TY
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNT 348
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ Y G+ MAF +++M G D ++T+NALI GLC + +A
Sbjct: 349 LINGYSQQGDHEMAFRFYEDMVCNGIQRD--------ILTYNALIFGLCKQAKTRKAAQF 400
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG--L 382
++ + + L P++ +++ ++ G C + + +EL Y+S++
Sbjct: 401 VKELDKENLVPNSSTFSALIMGQCVRKNADRGFEL---------------YKSMIRSGCH 445
Query: 383 SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGI 442
+E T++ L++ + + ++ REM R DS T+ NGL + + K +
Sbjct: 446 PNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKL 505
Query: 443 LLRM 446
L M
Sbjct: 506 LQEM 509
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 164/397 (41%), Gaps = 74/397 (18%)
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
++++ F + A + + + G LP + +A + +L QG + A + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
R +SP+ T +M YC G+ L +M GF + V++N LI G
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF--------RATDVSYNTLIAG 282
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
C + AL + M + GL P+ V++NT++ GFC+ +L++A ++ EM K + +
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM--KAVNVA 340
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
T VTY++L+N Y QG+ + F+ +M NG D +T I GL
Sbjct: 341 PNT-----------VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEA 491
K+A T + A VK+ LV
Sbjct: 390 KQAKT------------------------------------RKAAQFVKELDKENLV--- 410
Query: 492 AIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
P+ + ++ LI C R N ++ +E+YK M+ G P+ + L+ A
Sbjct: 411 -------------PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSA 457
Query: 552 LYYDRKNSEMGWVIRNTL-RSCNLNDSELHQVLNEIE 587
+ V+R + RS L+ +HQV N ++
Sbjct: 458 FCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLK 494
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 158/376 (42%), Gaps = 30/376 (7%)
Query: 126 LIDLLCTWWLDKAYKVFNEMIAS----GFLPSVATYNKFITAYLSSERVEQALGIFSAMA 181
L D+L +D KVF+ ++ S P V ++ + ++ A F M
Sbjct: 138 LRDVLVNGGVDLPAKVFDALLYSYRECDSTPRV--FDSLFKTFAHLKKFRNATDTFMQMK 195
Query: 182 ERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLP 241
+ G P + S NA +S G ++ AL E I P+ T + ++ C G L
Sbjct: 196 DYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLD 255
Query: 242 EAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
+ +L +M R ++ +Y L+ +C G S A L + M G P+
Sbjct: 256 KGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL--------QPN 307
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
+VTFN LIHG C ++ EA + M + ++P+ V+YNT++ G+ Q + + A+
Sbjct: 308 VVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYE 367
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
+M I D TY +L+ GL Q +K + +E+ + +P+S
Sbjct: 368 DMVCNGIQRDILTYNALIFGLC-------------KQAKTRKAAQFVKELDKENLVPNSS 414
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVK 480
T I G + + MI S C P+ ++ L+ C +F A +++
Sbjct: 415 TFSALIMGQCVRKNADRGFELYKSMIRSGC--HPNEQTFNMLVSAFCRNEDFDGASQVLR 472
Query: 481 DFSTRGLVNEAAIAHE 496
+ R + ++ H+
Sbjct: 473 EMVRRSIPLDSRTVHQ 488
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 131/295 (44%), Gaps = 9/295 (3%)
Query: 8 LKSFRHMVRMNVMIRGFATESVMS--CKEKKVGETFGLLRMEPYL------VSFKGVIKE 59
L+ +R M R + + VMS C+ K+ + LL+ L VS+ +I
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAG 282
Query: 60 LCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPN 119
CEK + A ++ M + GL P+ T+N LI G C+ + A +++ +M+ ++PN
Sbjct: 283 HCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPN 342
Query: 120 ERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
TY +LI+ + A++ + +M+ +G + TYN I + +A
Sbjct: 343 TVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVK 402
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
+ + L P+ +++A+I C ++ E+ + G P++ T++ L+ A C
Sbjct: 403 ELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
A + EM+R + + T ++ G+ + L EM + FL +
Sbjct: 463 DFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQE 517
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 11/257 (4%)
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC--TW 133
M + + D A++ +CK N + A L+ +M +G+ PN TY +ID C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 134 WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
W D A ++ MI P + T++ I A++ +V +A I+ M + P ++YN
Sbjct: 61 WSD-ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
++I FC+ ++ A + KG PD VT+S LI C + ++F EM R
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
+ + TYT L++ +C VG+ A L +EM G PD+ +TF+ ++ GLC
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY--------ITFHCMLAGLC 231
Query: 314 SLERVDEALGILRGMPE 330
S + + +A IL + +
Sbjct: 232 SKKELRKAFAILEDLQK 248
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 114/222 (51%), Gaps = 8/222 (3%)
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A +F EM G P+V TYN I ++ S R A + M E+ ++PD+V+++A+I+
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
F ++ ++ +A EI E + I P +TY+++I C Q + +A + M SP
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
T++ L+ YC + EM RG + + VT+ LIHG C +
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN--------TVTYTTLIHGFCQVGD 200
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
+D A +L M G++PD ++++ +L G C +EL+KA+ +
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 130/271 (47%), Gaps = 21/271 (7%)
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS 239
M + + D+V A++ + C+DG A + E EKGI P+ +TY+ +I + C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
+A L M+ ++P T++ L+ A+ + S A ++ EM P
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFP------- 113
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
+ +T+N++I G C +RVD+A +L M G SPD V+++T++ G+C+ + + E+
Sbjct: 114 -TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 172
Query: 360 KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
EM + I +++ VTY++L++ + G++ L EM G PD
Sbjct: 173 FCEMHRRGI-------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 219
Query: 420 SVTLGVFINGLNKKATTSIAKGILLRMISSQ 450
+T + GL K A IL + S+
Sbjct: 220 YITFHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 111/208 (53%), Gaps = 1/208 (0%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++++ +I C R +A +++R M K + PD T++ALI K R + A E+
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 102
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
Y +M + P TY S+ID C +D A ++ + M + G P V T++ I Y
Sbjct: 103 YKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK 162
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
++RV+ + IF M RG+ + V+Y +I FCQ G+L+ A ++ E + G+ PD +T
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGD 254
+ ++ LC + L +AF + ++ + +
Sbjct: 223 FHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 125/246 (50%), Gaps = 1/246 (0%)
Query: 42 GLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNM 101
G ++ +V ++ LC+ A+ + EM+ KG+ P+ TYN +I C
Sbjct: 2 GQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRW 61
Query: 102 LCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKF 160
A +L M + ++P+ T+ +LI+ + +A +++ EM+ P+ TYN
Sbjct: 62 SDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 161 ITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI 220
I + +RV+ A + +MA +G SPD+V+++ +I+ +C+ ++ +EI E +GI
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 221 LPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFH 280
+ + VTY+ LI C G L A DL EM+ V+P T+ ++ C E AF
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA 241
Query: 281 LHDEMR 286
+ ++++
Sbjct: 242 ILEDLQ 247
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 11 FRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKE 64
F +++ N MI F C + + LLR + P +V+F +I ++
Sbjct: 42 FPNVLTYNCMIDSF-------CHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKER 94
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
++ EA+E+ +EM R + P TYN++I G CK + A + D M +G SP+ T+
Sbjct: 95 KVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFS 154
Query: 125 SLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
+LI+ C +D ++F EM G + + TY I + ++ A + + M
Sbjct: 155 TLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 214
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEI 211
G++PD ++++ +++ C EL KA I
Sbjct: 215 GVAPDYITFHCMLAGLCSKKELRKAFAI 242
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 30/244 (12%)
Query: 297 QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
+V A++ LC A + M E G+ P+ ++YN ++ FC A
Sbjct: 5 HIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDA 64
Query: 357 YELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
+L M EK I D VT+S+L+N + + + + ++ +EM R
Sbjct: 65 DQLLRHMIEKQI-------------NPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSI 111
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAV 476
P ++T I+G K+ AK +L M S C P + + TLI Y + K
Sbjct: 112 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC--SPDVVTFSTLIN--GYCKAKRVD 167
Query: 477 GLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHY 536
++ F MH + + Y LI C+ G+++ A ++ EM+
Sbjct: 168 NGMEIFC-------------EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISC 214
Query: 537 GFFP 540
G P
Sbjct: 215 GVAP 218
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 30/225 (13%)
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVT 387
M + + D V ++ C+ A L EM EK I+ + +T
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIF-------------PNVLT 47
Query: 388 YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMI 447
Y+ +++ + G +L R M PD VT IN K+ S A+ I M+
Sbjct: 48 YNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEML 107
Query: 448 SSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDG 507
P+ I Y+++I+ F + V++A + M + PD
Sbjct: 108 RWS--IFPTTITYNSMIDG---------------FCKQDRVDDAKRMLDSMASKGCSPDV 150
Query: 508 AVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
++ LI +C+ V+ E++ EM G + + +LIH
Sbjct: 151 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 195
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 147/304 (48%), Gaps = 10/304 (3%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
LR+ P +F V + + ++A ++ M+ G D ++N ++ +CK + +
Sbjct: 120 LRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEK 179
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A EL+ +R R S + TY +++ C KA +V EM+ G P++ TYN +
Sbjct: 180 AYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLK 238
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ + ++ A F M +R D+V+Y V+ F GE+++A + E + +G+LP
Sbjct: 239 GFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLP 298
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
TY+A+IQ LC + ++ A +F EM+R P+ +TY L+ GEFS L
Sbjct: 299 SVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELM 358
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
M + G P+F T+N +I V++ALG+ M P+ +YN
Sbjct: 359 QRMENEGCEPNF--------QTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNI 410
Query: 343 VLFG 346
++ G
Sbjct: 411 LISG 414
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 149/343 (43%), Gaps = 41/343 (11%)
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
I P T++ + + G +A LFL M +++ ++ C A+
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
L +R R FS VT+N +++G C ++R +AL +L+ M E G++P+ +
Sbjct: 182 ELFRALRGR---------FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 340 YNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQG 399
YNT+L GF + +++ A+E +EM ++ +D VTY+++++ + G
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV-------------VTYTTVVHGFGVAG 279
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
+++ + EM R G LP T I L KK A + M+ P+
Sbjct: 280 EIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRG--YEPNVTT 337
Query: 460 YDTLIENCSYV-EFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHC 518
Y+ LI + EF L+ +RM N +P+ YN++I +
Sbjct: 338 YNVLIRGLFHAGEFSRGEELM----------------QRMENEGCEPNFQTYNMMIRYYS 381
Query: 519 RRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEM 561
V KA ++++M P++ + LI ++ +++ +M
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDM 424
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 105/244 (43%), Gaps = 41/244 (16%)
Query: 32 CKEKKVGETFGLLR-----MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCE 86
CK K+V + + L R V++ ++ C +R +A EV++EM +G+ P+
Sbjct: 172 CKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVR-------------------------------- 114
TYN ++ G + + A E + +M+ R
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 115 ---GLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
G+ P+ TY ++I +LC ++ A +F EM+ G+ P+V TYN I +
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
+ + M G P+ +YN +I + + E+EKAL + + LP+ TY+ L
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 231 IQAL 234
I +
Sbjct: 412 ISGM 415
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 105/260 (40%), Gaps = 33/260 (12%)
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
++ PS TF + S + D+A+ + M E G D S+NT+L C+ + ++K
Sbjct: 120 LRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEK 179
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
AYEL + +L S D VTY+ +LN + K ++ +EM
Sbjct: 180 AYEL---------------FRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER 224
Query: 415 GYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKS 474
G P+ T + G + A L M C + Y T++
Sbjct: 225 GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI--DVVTYTTVVHG-------- 274
Query: 475 AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
F G + A + M V P A YN +I C++ NV A M++EMV
Sbjct: 275 -------FGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 535 HYGFFPHMFSVLSLIHALYY 554
G+ P++ + LI L++
Sbjct: 328 RRGYEPNVTTYNVLIRGLFH 347
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + ++ +I+ LC+K+ +E A + EM R+G P+ TYN LI G+ EL
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEEL 357
Query: 108 YDQMRVRGLSPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+M G PN +TY +I C+ ++KA +F +M + LP++ TYN I+
Sbjct: 358 MQRMENEGCEPNFQTYNMMIRYYSECSE-VEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 166 SSERVE 171
+R E
Sbjct: 417 VRKRSE 422
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 52/328 (15%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
+F V+++ ++++EA M + L P+ +N L+ +CK +N+ A E+++ M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 112 RVRGLSPNERTYMSLIDLLCTWW----LDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
R R +P+ +TY L++ W L KA +VF EMI +G P + TY+ + +
Sbjct: 230 RDR-FTPDSKTYSILLE---GWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 168 ERVEQALGI-----------------------------------FSAMAERGLSPDLVSY 192
RV++ALGI F M G+ D+ +
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
N++I FC+ ++ + E KG+ P+ + + +++ L +G EAFD+F +M++
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK 405
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
P TYT ++ +C E A + MR +G PS+ TF+ LI+GL
Sbjct: 406 V-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVF--------PSMHTFSVLINGL 456
Query: 313 CSLERVDEALGILRGMPEMGLSPDAVSY 340
C +A +L M EMG+ P V++
Sbjct: 457 CEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 129/315 (40%), Gaps = 40/315 (12%)
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
S Y ++ + + ++ + + L + MR + L ++ TF ++ ++
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKML---------NVETFCIVMRKYARAQK 183
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
VDEA+ M + L P+ V++N +L C+ + ++KA E+ M D +T
Sbjct: 184 VDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR------DRFT--- 234
Query: 378 LMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTS 437
D TYS LL + + N+ K ++ REM G PD VT + ++ L K
Sbjct: 235 -----PDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 438 IAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHER 497
A GI+ M S C P+ IY L+ + T + EA
Sbjct: 290 EALGIVRSMDPSIC--KPTTFIYSVLVHT---------------YGTENRLEEAVDTFLE 332
Query: 498 MHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
M +K D AV+N LI C+ + Y + KEM G P+ S ++ L +
Sbjct: 333 MERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGE 392
Query: 558 NSEMGWVIRNTLRSC 572
E V R ++ C
Sbjct: 393 KDEAFDVFRKMIKVC 407
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 5/111 (4%)
Query: 39 ETFGLLRM-----EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALIC 93
E F + R EP ++ VIK CEK+ ME A +V + M +KG+ P T++ LI
Sbjct: 395 EAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLIN 454
Query: 94 GMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNE 144
G+C+ R A L ++M G+ P+ T+ L LL + K NE
Sbjct: 455 GLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNE 505
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 142/597 (23%), Positives = 246/597 (41%), Gaps = 99/597 (16%)
Query: 7 TLKSFRHMVRMN-VMIRGFATESVMS------CKEKKVGETFGLLRM----------EPY 49
T KS R + N ++ RG+ E + + CK +V + F L+ M + Y
Sbjct: 227 TGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTY 286
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
V G +KE R+++A ++ +M R G+ D Y+ LI G+CK +++ A+ LY
Sbjct: 287 CVLIHGFVKE----SRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYL 342
Query: 110 QMRVRGLSPN------------ERTYMSLIDLLCTWWLDKA-----YK-VFNEMIASGFL 151
+++ G+ P+ E + +S I + +DK YK +F I + +
Sbjct: 343 EIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLV 402
Query: 152 PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI 211
++ + + S+ V + + + + + PD S + VI+ + +++ A+ +
Sbjct: 403 HEAYSFIQNLMGNYESDGVSEIVKLLKD-HNKAILPDSDSLSIVINCLVKANKVDMAVTL 461
Query: 212 KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
+ V+ G++P + Y+ +I+ +C +G E+ L EM V PS T +
Sbjct: 462 LHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAE 521
Query: 272 VGEFSMAFHLHDEMRHRGFLP-----DFVIQ----------------------FSPSLVT 304
+F A L +MR GF P F+++ F +V
Sbjct: 522 RCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVA 581
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
A I GL E VD L + R + G PD ++Y+ ++ C+ +A L EM
Sbjct: 582 STAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMV 641
Query: 365 EKIIWLDEYTYESLMEGLSDEV-TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
K GL V TY+S+++ + +G + + M + PD +T
Sbjct: 642 SK--------------GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITY 687
Query: 424 GVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFS 483
I+GL S A M C P+ I + LI+ GL K
Sbjct: 688 TSLIHGLCASGRPSEAIFRWNEMKGKDC--YPNRITFMALIQ-----------GLCK--- 731
Query: 484 TRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
G EA + M ++PD AVY L+ N+N + +++EMVH G FP
Sbjct: 732 -CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 142/333 (42%), Gaps = 44/333 (13%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + + +I+ +C++ R EE+ +++ EM G+ P T N + + + + + A++L
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC------------------------------------ 131
+MR G P + L+ LC
Sbjct: 532 LKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIK 591
Query: 132 TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+D+ ++F ++ A+G P V Y+ I A + R +A +F+ M +GL P + +
Sbjct: 592 NEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVAT 651
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN++I +C++GE+++ L E PD +TY++LI LC G EA + EM
Sbjct: 652 YNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMK 711
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
D P+ T+ L+ C G A EM + PD + + +L+
Sbjct: 712 GKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAV--------YLSLVSS 763
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
S E ++ GI R M G P +V N +L
Sbjct: 764 FLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 195/429 (45%), Gaps = 42/429 (9%)
Query: 135 LDKAYKVFNEMIASGF-LPSVATYNKFITAYL--SSERVEQALGIFSAMAERGLSPDLVS 191
+D+A VF+ + G +P+ TYN + A +S VE M + G D +
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFT 216
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
V+ +C G+ E+AL + E + +G L + ++ + L+ + C G + +AF+L +
Sbjct: 217 LTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLE 275
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
D+ + TY L++ + AF L ++MR G D + ++ LI G
Sbjct: 276 ERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIAL--------YDVLIGG 327
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV-EMDEKIIWL 370
LC + ++ AL + + G+ PD +L F + EL + E+ + ++D+K + L
Sbjct: 328 LCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVML 387
Query: 371 DEYTYESLMEGL--SDEV--TYS---SLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
Y+SL EG +D V YS +L+ +Y + G + ++ KL ++ + LPDS +L
Sbjct: 388 ---LYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDG-VSEIVKLLKDHNK-AILPDSDSL 442
Query: 424 GVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFS 483
+ IN L K +A +L ++ + +P ++Y+ +IE G+ K+
Sbjct: 443 SIVINCLVKANKVDMAVTLLHDIVQNG--LIPGPMMYNNIIE-----------GMCKE-- 487
Query: 484 TRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMF 543
G E+ M + V+P N + R + A ++ K+M YGF P +
Sbjct: 488 --GRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIK 545
Query: 544 SVLSLIHAL 552
L+ L
Sbjct: 546 HTTFLVKKL 554
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 116/591 (19%), Positives = 231/591 (39%), Gaps = 94/591 (15%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGL-APDCETYNALICGMCKVRNMLCAVELYD- 109
+F I+ L ++EA V + GL P+ TYN L+ + K + +VEL +
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNS--SSVELVEA 200
Query: 110 ---QMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPS-VATYNKFITAY 164
+MR G ++ T ++ + C T ++A VFNE+++ G+L ++T + ++
Sbjct: 201 RLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTI--LVVSF 258
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+V++A + + ER + + +Y +I F ++ ++KA ++ + G+ D
Sbjct: 259 CKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADI 318
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFH---- 280
Y LI LC L A L+LE+ R + P +L+ ++ E S
Sbjct: 319 ALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIG 378
Query: 281 ------------------LHDEMRHRGF---------------------LPDFVIQFSPS 301
+ +++ H + L D P
Sbjct: 379 DIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPD 438
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
+ + +I+ L +VD A+ +L + + GL P + YN ++ G C+ +++ +L
Sbjct: 439 SDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLG 498
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLN------DYFAQGNMQKVFKLEREMTRNG 415
EM + + ++T + L++ + L+ Y + ++ L +++ NG
Sbjct: 499 EMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENG 558
Query: 416 -------YLPDSVTLGVF---------INGL------------------NKKATTSIAKG 441
YL D G I+GL N IA
Sbjct: 559 RAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYH 618
Query: 442 ILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM 501
+L++ + C TM + I+++ ++ + ++ + G ++ RM+
Sbjct: 619 VLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYED 678
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
PD Y LI C G ++A + EM +P+ + ++LI L
Sbjct: 679 EKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGL 729
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV----RNMLC 103
P ++++ +IK LC+ R EA + EM KGL P TYN++I G CK R + C
Sbjct: 612 PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSC 671
Query: 104 AVELY-------------------------------DQMRVRGLSPNERTYMSLIDLLCT 132
V +Y ++M+ + PN T+M+LI LC
Sbjct: 672 IVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Query: 133 -WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
W +A F EM P A Y ++++LSSE + GIF M +G P V
Sbjct: 732 CGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVD 791
Query: 192 YN-----AVISKFCQD 202
N V SKF +D
Sbjct: 792 RNYMLAVNVTSKFVED 807
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 179/427 (41%), Gaps = 44/427 (10%)
Query: 89 NALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIA 147
NALI K+ + + ++ +M+ G+ P TY L++ L+ ++D A +VF M +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 148 SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEK 207
P + TYN I Y + + ++A+ M RG D ++Y +I D +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 208 ALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
+ + E EKGI +S +I LC +G L E + +F M+R P+ + YT L+
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
Y G A L M GF PD +VT++ +++GLC RV+EAL
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPD--------VVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS---- 383
GL+ +++ Y++++ G + + +A L EM EK D Y Y +L++ +
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 384 -DEV------------------TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
DE TY+ LL+ F + ++ KL M G P +
Sbjct: 483 VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFR 542
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-----CSYVEFKSAVGLV 479
GL + A IL + P +I D E+ C K A L
Sbjct: 543 ALSTGLCLSGKVARACKILDEL-------APMGVILDAACEDMINTLCKAGRIKEACKLA 595
Query: 480 KDFSTRG 486
+ RG
Sbjct: 596 DGITERG 602
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 183/461 (39%), Gaps = 60/461 (13%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+EP L ++ ++ L ++ A+ V M + PD TYN +I G CK A+
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 106 ELYDQMRVRGLSPNERTYMSLIDL-----------------------------------L 130
E M RG ++ TYM++I L
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL 337
Query: 131 CT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
C L++ Y VF MI G P+VA Y I Y S VE A+ + M + G PD+
Sbjct: 338 CKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 397
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
V+Y+ V++ C++G +E+AL+ G+ + + YS+LI L G + EA LF E
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
M + + Y L+ A+ + A L M ++ T+ L+
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE-------GCDQTVYTYTILL 510
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
G+ R +EAL + M + G++P A + + G C ++ +A ++ E+ +
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Query: 370 LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
LD ++N G +++ KL +T G V IN
Sbjct: 571 LD--------------AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINA 616
Query: 430 LNKKATTSIAKGILLRMISSQCLTMPSY---IIYDTLIENC 467
L K +A ++ I M S + + TL+E C
Sbjct: 617 LRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLETC 657
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 98/256 (38%), Gaps = 30/256 (11%)
Query: 297 QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
+F ++ NALI L V+E L + R M E G+ P +YN ++ G + A
Sbjct: 182 EFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSA 241
Query: 357 YELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
+ M+ I D TY ++++G Y G QK + R+M G+
Sbjct: 242 ERVFEVMESGRIKPDIVTYNTMIKG-------------YCKAGQTQKAMEKLRDMETRGH 288
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAV 476
D +T I A + + L Y + E V +
Sbjct: 289 EADKITYMTMIQACY--ADSDFGSCVAL---------------YQEMDEKGIQVPPHAFS 331
Query: 477 GLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHY 536
++ G +NE E M KP+ A+Y +LI + + G+V A + M+
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Query: 537 GFFPHMFSVLSLIHAL 552
GF P + + +++ L
Sbjct: 392 GFKPDVVTYSVVVNGL 407
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 166/341 (48%), Gaps = 9/341 (2%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
L +EP +V+ ++ C +++A V +M + G+ D LI +CK R ++
Sbjct: 7 LGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVP 66
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A+E+ +M+ RG+SPN TY SLI LC + L A + +EM + P+V T++ I
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
AY ++ + ++ M + + P++ +Y+++I C +++A+++ + KG P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ VTYS L + + L +M + V+ + + L+ Y G+ +A +
Sbjct: 187 NVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVF 246
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
M G +P+ + ++N ++ GL + V++AL M + D ++Y
Sbjct: 247 GYMTSNGLIPN--------IRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS 383
++ G C+ +K+AY+L ++ K + D Y ++ L+
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELN 339
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 143/309 (46%), Gaps = 9/309 (2%)
Query: 75 EMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW 134
+M + G+ PD T ++L+ G C ++ AV + QM G+ + LID LC
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 135 L-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
L A +V M G P+V TY+ IT S R+ A M + ++P++++++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
A+I + + G+L K + ++ I P+ TYS+LI LC+ + EA + M+
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
+P+ TY+ L + L D+M RG + + V+ N LI G
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG--------VAANTVSCNTLIKGYF 234
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
++D ALG+ M GL P+ SYN VL G E++KA M + LD
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 294
Query: 374 TYESLMEGL 382
TY ++ G+
Sbjct: 295 TYTIMIHGM 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 126/311 (40%), Gaps = 51/311 (16%)
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
L+M++ + P T + L+ +CL A ++ +M G D V+
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVD--------T 52
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
LI LC V AL +L+ M + G+SP+ V+Y++++ G C+ L A EMD K
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
Query: 367 IIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVF 426
I + +T+S+L++ Y +G + KV + + M + P+ T
Sbjct: 113 KIN-------------PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 159
Query: 427 INGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSA-----VGLVKD 481
I GL A +L MIS C P+ + Y TL FKS+ + L+ D
Sbjct: 160 IYGLCMHNRVDEAIKMLDLMISKGC--TPNVVTYSTLANGF----FKSSRVDDGIKLLDD 213
Query: 482 FSTRGL-------------------VNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
RG+ ++ A M + + P+ YN+++ G
Sbjct: 214 MPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE 273
Query: 523 VNKAYEMYKEM 533
V KA ++ M
Sbjct: 274 VEKALSRFEHM 284
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 99/227 (43%), Gaps = 32/227 (14%)
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVT 387
M ++G+ PD V+ ++++ GFC +K A + +M++ G+ +V
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKM--------------GIKRDVV 49
Query: 388 YSSLLNDYFAQGNMQ-KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
++L D + + ++ + M G P+ VT I GL K + A+ L M
Sbjct: 50 VDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 109
Query: 447 ISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
S + P+ I + LI+ ++ RG +++ ++ M MS+ P+
Sbjct: 110 DSKK--INPNVITFSALIDA---------------YAKRGKLSKVDSVYKMMIQMSIDPN 152
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALY 553
Y+ LI+ C V++A +M M+ G P++ + +L + +
Sbjct: 153 VFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFF 199
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 156/346 (45%), Gaps = 23/346 (6%)
Query: 88 YNALICGMCKVRNMLCAVELYDQM-RVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEM 145
+ + I C+ R M A+ +D M R+ PN Y ++++ + + +DKA + + M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGEL 205
P V T+N I Y S + + AL +F M E+G P++VS+N +I F G++
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKI 279
Query: 206 EKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRL 265
E+ +++ E +E G + T L+ LC +G + +A L L++L V PS Y L
Sbjct: 280 EEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSL 339
Query: 266 MYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL 325
+ C + A + +E+ +G P F + L+ GL R ++A G +
Sbjct: 340 VEKLCGENKAVRAMEMMEELWKKGQTPCF--------IACTTLVEGLRKSGRTEKASGFM 391
Query: 326 RGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE 385
M G+ PD+V++N +L C A L++ K DE TY L+ G + E
Sbjct: 392 EKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKE 451
Query: 386 VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
G ++ L EM LPD T ++GL+
Sbjct: 452 -------------GRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLS 484
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 146/341 (42%), Gaps = 42/341 (12%)
Query: 43 LLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNML 102
L+ +P + + V+ + M++A + M ++ PD T+N LI G C+
Sbjct: 186 LIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFD 245
Query: 103 CAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A++L+ +M+ +G PN V ++N I
Sbjct: 246 LALDLFREMKEKGCEPN----------------------------------VVSFNTLIR 271
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+LSS ++E+ + + M E G + ++ C++G ++ A + + + K +LP
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP 331
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+ Y +L++ LC + A ++ E+ + +P T L+ G A
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
++M + G LPD VTFN L+ LCS + +A + G PD +Y+
Sbjct: 392 EKMMNAGILPDS--------VTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS 383
++ GF + K+ L EM +K + D +TY LM+GLS
Sbjct: 444 LVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLS 484
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 152/352 (43%), Gaps = 27/352 (7%)
Query: 120 ERTYMSLIDLLC-TWWLDKAYKVFNEM--IASGFLPSVATYNKFITAYLSSERVEQALGI 176
E + S ID C +D A F+ M + G P+V YN + Y+ S +++AL
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRF 215
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCL 236
+ M + PD+ ++N +I+ +C+ + + AL++ E EKG P+ V+++ LI+
Sbjct: 216 YQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLS 275
Query: 237 QGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI 296
G + E + EM+ S +T L+ C G A L ++ ++ LP
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP---- 331
Query: 297 QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
S + +L+ LC + A+ ++ + + G +P ++ T++ G + +KA
Sbjct: 332 ----SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKA 387
Query: 357 YELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
+M I L D VT++ LL D + + +L + GY
Sbjct: 388 SGFMEKMMNAGI-------------LPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGY 434
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCS 468
PD T V ++G K+ + ++ M+ L P Y+ L++ S
Sbjct: 435 EPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDML--PDIFTYNRLMDGLS 484
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 110/266 (41%), Gaps = 14/266 (5%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKE 71
N++I G+ C+ K L R EP +VSF +I+ ++EE +
Sbjct: 232 NILINGY-------CRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVK 284
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
+ EM G T L+ G+C+ + A L + + + P+E Y SL++ LC
Sbjct: 285 MAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLC 344
Query: 132 TW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
+A ++ E+ G P + S R E+A G M G+ PD V
Sbjct: 345 GENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSV 404
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
++N ++ C A ++ KG PD+ TY L+ +G E L EM
Sbjct: 405 TFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEM 464
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFS 276
L D+ P TY RLM G+FS
Sbjct: 465 LDKDMLPDIFTYNRLMDGLSCTGKFS 490
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 10/296 (3%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N ++ G+ M K + + G R +P + +F +I C + + A ++ REM
Sbjct: 197 NTVVNGYVKSGDMD-KALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLD 136
KG P+ ++N LI G + V++ +M G +E T L+D LC +D
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A + +++ LPS Y + + +A+ + + ++G +P ++ ++
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ G EKA + + GILPD VT++ L++ LC +A L L
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
P +TY L+ + G L +EM + LPD + T+N L+ GL
Sbjct: 436 PDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPD--------IFTYNRLMDGL 483
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 131/333 (39%), Gaps = 51/333 (15%)
Query: 243 AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSL 302
AFD ++ G P+ Y ++ Y G+ A + M PD +
Sbjct: 179 AFDTMKRLIDG--KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPD--------V 228
Query: 303 VTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVE 362
TFN LI+G C + D AL + R M E G P+ VS+NT++ GF ++++ ++ E
Sbjct: 229 CTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYE 288
Query: 363 MDEKIIWLDEYTYESLMEGL----------------------SDEVTYSSLLNDYFAQGN 400
M E E T E L++GL E Y SL+ +
Sbjct: 289 MIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENK 348
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIY 460
+ ++ E+ + G P + + GL K T A G + +M+++ L P + +
Sbjct: 349 AVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGIL--PDSVTF 406
Query: 461 DTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
+ L+ + CS A L S++G +PD Y++L+ +
Sbjct: 407 NLLLRDLCSSDHSTDANRLRLLASSKG----------------YEPDETTYHVLVSGFTK 450
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
G + + EM+ P +F+ L+ L
Sbjct: 451 EGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 132/322 (40%), Gaps = 43/322 (13%)
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
AYC + A D M+ +I P++ +N +++G +D+AL +
Sbjct: 166 AYCRARKMDYALLAFDTMKR-------LIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQR 218
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVT 387
M + PD ++N ++ G+C+ + A +L EM EK + V+
Sbjct: 219 MGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCE-------------PNVVS 265
Query: 388 YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMI 447
+++L+ + + G +++ K+ EM G T + ++GL ++ A G++L ++
Sbjct: 266 FNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLL 325
Query: 448 SSQCLTMPSYIIYDTLIEN-CSYVE-------------------FKSAVGLVKDFSTRGL 487
+ + L PS Y +L+E C + F + LV+ G
Sbjct: 326 NKRVL--PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGR 383
Query: 488 VNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLS 547
+A+ E+M N + PD +NLL+ D C + A + G+ P +
Sbjct: 384 TEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHV 443
Query: 548 LIHALYYDRKNSEMGWVIRNTL 569
L+ + + E G V+ N +
Sbjct: 444 LVSGFTKEGRRKE-GEVLVNEM 464
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 83/183 (45%), Gaps = 7/183 (3%)
Query: 32 CKEKKVGETFGLL------RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C+E +V + GL+ R+ P + ++++LC + + A E++ E+ +KG P
Sbjct: 309 CREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCF 368
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEM 145
L+ G+ K A ++M G+ P+ T+ L+ LC+ +
Sbjct: 369 IACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLL 428
Query: 146 IAS-GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
+S G+ P TY+ ++ + R ++ + + M ++ + PD+ +YN ++ G+
Sbjct: 429 ASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGK 488
Query: 205 LEK 207
+
Sbjct: 489 FSR 491
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 128/246 (52%), Gaps = 2/246 (0%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+EP V+ ++ LCE R++EAK++++E+ K PD TYN L+ +CK +++
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 106 ELYDQMRVR-GLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
E D+MR + P+ ++ LID +C + L +A + +++ +GF P YN +
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + + +A+G++ M E G+ PD ++YN +I + G +E+A V+ G PD
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
TY++L+ +C +G A L EM +P++ TY L++ C L++
Sbjct: 335 TATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
Query: 284 EMRHRG 289
M+ G
Sbjct: 395 MMKSSG 400
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 190/435 (43%), Gaps = 42/435 (9%)
Query: 135 LDKAYKVFNEMIASGFLP-SVATYNKFITAYLSSERVEQALGIFSAM--AERGLSPDLVS 191
L A +FN + A+ +P + +N + +Y S V + +F + ++ P +
Sbjct: 65 LSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRST 124
Query: 192 YNAVISKFCQ--DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
+ ++S C+ D + + V G+ PD VT +++LC G + EA DL E
Sbjct: 125 FLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
+ P TY L+ C + + + DEMR DF ++ P LV+F LI
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD-----DFDVK--PDLVSFTILI 237
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
+C+ + + EA+ ++ + G PD YNT++ GFC + + +A + +M E+ +
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 370 LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
D+ TY +L+ GLS G +++ + M GY PD+ T +NG
Sbjct: 298 PDQITYNTLIFGLS-------------KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNG 344
Query: 430 LNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVN 489
+ +K + A +L M + C P+ Y+TL+ GL K L++
Sbjct: 345 MCRKGESLGALSLLEEMEARGC--APNDCTYNTLLH-----------GLCK----ARLMD 387
Query: 490 EAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
+ +E M + VK + Y L+ + G V +AYE++ V + +L
Sbjct: 388 KGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLE 447
Query: 550 HALYYDRKNSEMGWV 564
L + +K E G V
Sbjct: 448 TTLKWLKKAKEQGLV 462
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 23/322 (7%)
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
V+ M GL PD T + + +C+ + A +L ++ + P+ TY L+ LC
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 132 TWW-LDKAYKVFNEMIAS-GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
L Y+ +EM P + ++ I +S+ + +A+ + S + G PD
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
YN ++ FC + +A+ + + E+G+ PD +TY+ LI L G + EA
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
M+ P +TYT LM C GE A L +EM RG +P+ T+N L+
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG--------CAPNDCTYNTLL 377
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
HGLC +D+ + + M G+ ++ Y T++ + ++ +AYE+
Sbjct: 378 HGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEV---------- 427
Query: 370 LDEYTYESLMEGLSDEVTYSSL 391
+ Y + LSD YS+L
Sbjct: 428 ---FDYAVDSKSLSDASAYSTL 446
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 179/435 (41%), Gaps = 50/435 (11%)
Query: 17 MNVMIRGFATESVMSCKEKKVG--ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVR 74
+N +I GFA S + +G + GL LVS +I L + R EA+ +
Sbjct: 272 VNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVS---IISALADSGRTLEAEALFE 328
Query: 75 EMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT-- 132
E+ + G+ P YNAL+ G K + A + +M RG+SP+E TY LID
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 133 -WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
W + A V EM A P+ +++ + + ++ + M G+ PD
Sbjct: 389 RW--ESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
YN VI F + L+ A+ + +GI PD VT++ LI C G A ++F M
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 506
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV---------------- 295
R P +TY ++ +Y + L +M+ +G LP+ V
Sbjct: 507 RRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFN 566
Query: 296 -----------IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
+ PS +NALI+ ++A+ R M GL P ++ N+++
Sbjct: 567 DAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLI 626
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
F + R +A+ + M E + D VTY++L+ QKV
Sbjct: 627 NAFGEDRRDAEAFAVLQYMKENGV-------------KPDVVTYTTLMKALIRVDKFQKV 673
Query: 405 FKLEREMTRNGYLPD 419
+ EM +G PD
Sbjct: 674 PVVYEEMIMSGCKPD 688
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 114/513 (22%), Positives = 208/513 (40%), Gaps = 76/513 (14%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNM--LCAVELY 108
+++ +I +E+A ++ +M + G D Y+ +I + + + + + LY
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 109 DQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
++ L + + +I + KA ++ A+G AT I+A S
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
R +A +F + + G+ P +YNA++ + + G L+ A + +E ++G+ PD+ TY
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
S LI A G A + EM GDV P++ ++RL+ + GE+ F + EM+
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
G PD QF +N +I +D A+ M G+ PD V++NT++
Sbjct: 438 IGVKPDR--QF------YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKL 407
C+ A E+ M+ + L TY+ ++N Y Q + +L
Sbjct: 490 CKHGRHIVAEEMFEAMERRGC-------------LPCATTYNIMINSYGDQERWDDMKRL 536
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENC 467
+M G LP+ VT ++ K
Sbjct: 537 LGKMKSQGILPNVVTHTTLVDVYGKSG--------------------------------- 563
Query: 468 SYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAY 527
F A+ +++ + GL KP +YN LI + +RG +A
Sbjct: 564 ---RFNDAIECLEEMKSVGL----------------KPSSTMYNALINAYAQRGLSEQAV 604
Query: 528 EMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSE 560
++ M G P + ++ SLI+A DR+++E
Sbjct: 605 NAFRVMTSDGLKPSLLALNSLINAFGEDRRDAE 637
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 1/224 (0%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+EP V++ +I C+ R A+E+ M R+G P TYN +I
Sbjct: 475 IEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMK 534
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
L +M+ +G+ PN T+ +L+D+ + + A + EM + G PS YN I AY
Sbjct: 535 RLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 594
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
EQA+ F M GL P L++ N++I+ F +D +A + E G+ PD
Sbjct: 595 AQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDV 654
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
VTY+ L++AL + ++ EM+ P + L A
Sbjct: 655 VTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSA 698
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++ +I ++ER ++ K ++ +M +G+ P+ T+ L+ K A+E
Sbjct: 512 PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIEC 571
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
++M+ GL P+ Y +LI+ L ++A F M + G PS+ N I A+
Sbjct: 572 LEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGE 631
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
R +A + M E G+ PD+V+Y ++ + + +K + E + G PD
Sbjct: 632 DRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKA 691
Query: 227 YSALIQAL 234
S L AL
Sbjct: 692 RSMLRSAL 699
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 153/324 (47%), Gaps = 13/324 (4%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
++ +P + +F ++ LC+ ++E + ++R M R + PD T+N L G C+VR+
Sbjct: 228 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKK 286
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFL---PSVATYNK 159
A++L ++M G P TY + ID C +D+A +F+ MI G P+ T+
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFAL 346
Query: 160 FITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
I A +++ E+ + M G PD+ +Y VI C ++++A + E KG
Sbjct: 347 MIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKG 406
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
PD VTY+ ++ LC EA L+ M+ +PS TY L+ + + + AF
Sbjct: 407 YPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAF 466
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
+ EM R + D + T+ A+I+GL R EA +L + GL
Sbjct: 467 NTWTEMDKRDCVQD--------VETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRV 518
Query: 340 YNTVLFGFCQIRELKKAYELKVEM 363
+++ L ++ LK +++ M
Sbjct: 519 FDSFLMRLSEVGNLKAIHKVSEHM 542
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 125/278 (44%), Gaps = 12/278 (4%)
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
++RV+ P + L+D LC L K + + P T+N +
Sbjct: 225 RIRVKT-QPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRD 283
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL---PDDVT 226
++A+ + M E G P+ +Y A I FCQ G +++A ++ + KG P T
Sbjct: 284 PKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKT 343
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
++ +I AL E F+L M+ P STY ++ C+ + A+ DEM
Sbjct: 344 FALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
++G+ PD +VT+N + LC + DEAL + M E +P +YN ++
Sbjct: 404 NKGYPPD--------IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISM 455
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD 384
F ++ + A+ EMD++ D TY +++ GL D
Sbjct: 456 FFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFD 493
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 27/273 (9%)
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
++ K+C+ K + + P+ ++ L+ ALC G + E + L +R
Sbjct: 205 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEG-EALLRRMRHR 263
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
V P +T+ L + +C V + A L +EM G P T+ A I C
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGH--------KPENFTYCAAIDTFCQ 315
Query: 315 LERVDEALGILRGMPEMGLS---PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
VDEA + M G + P A ++ ++ + + ++ +EL M D
Sbjct: 316 AGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPD 375
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
TY+ ++EG+ + + +K EM+ GY PD VT F+ L
Sbjct: 376 VSTYKDVIEGMC-------------MAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLC 422
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
+ T A + RM+ S+C PS Y+ LI
Sbjct: 423 ENRKTDEALKLYGRMVESRC--APSVQTYNMLI 453
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 106/263 (40%), Gaps = 38/263 (14%)
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
++ P + FN L+ LC V E +LR M + PDA ++N + FG+C++R+ KK
Sbjct: 228 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKK 286
Query: 356 AYELKVEMDEKIIWLDEYTYESLME-----GLSDEVTYSSLLNDYFAQGNMQKVFKLERE 410
A +L EM E + +TY + ++ G+ DE + L + +G+
Sbjct: 287 AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEA--ADLFDFMITKGSAVSA------ 338
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYV 470
P + T + I L K ++ RMIS+ CL P Y +IE
Sbjct: 339 -------PTAKTFALMIVALAKNDKAEECFELIGRMISTGCL--PDVSTYKDVIEGMCMA 389
Query: 471 EFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMY 530
E V+EA + M N PD YN + C ++A ++Y
Sbjct: 390 E---------------KVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLY 434
Query: 531 KEMVHYGFFPHMFSVLSLIHALY 553
MV P + + LI +
Sbjct: 435 GRMVESRCAPSVQTYNMLISMFF 457
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 157/338 (46%), Gaps = 9/338 (2%)
Query: 57 IKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGL 116
+ +L E E EEA + + G D +Y++LI + K RN ++ +R R +
Sbjct: 53 LTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNV 112
Query: 117 SPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
E +M LI +DKA VF+++ + + ++ + N I + + +E+A
Sbjct: 113 RCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKS 172
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
F + L P+ VS+N +I F + E A ++ E +E + P VTY++LI LC
Sbjct: 173 FFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC 232
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
+ +A L +M++ + P+ T+ LM C GE++ A L +M +RG
Sbjct: 233 RNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRG------ 286
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
P LV + L+ L R+DEA +L M + + PD V YN ++ C + +
Sbjct: 287 --CKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPE 344
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLN 393
AY + EM K + TY +++G + S LN
Sbjct: 345 AYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLN 382
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 132/298 (44%), Gaps = 9/298 (3%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
S +I L + +E+AK L P+ ++N LI G + A +++D+M
Sbjct: 153 SLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEM 212
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
+ P+ TY SLI LC + KA + +MI P+ T+ +
Sbjct: 213 LEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEY 272
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
+A + M RG P LV+Y ++S + G +++A + E ++ I PD V Y+ L
Sbjct: 273 NEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNIL 332
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
+ LC + +PEA+ + EM P+ +TY ++ +C + +F ++ + M
Sbjct: 333 VNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM----- 387
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
+ P+ TF ++ GL +D A +L M + LS + ++ +L C
Sbjct: 388 ---LASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
+R+ P VSF +IK +K E A +V EM + P TYN+LI +C+ +M
Sbjct: 180 MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGK 239
Query: 104 AVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A L + M + + PN T+ L+ L C ++A K+ +M G P + Y ++
Sbjct: 240 AKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMS 299
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
R+++A + M +R + PD+V YN +++ C + + +A + E KG P
Sbjct: 300 DLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYT 263
+ TY +I C ++ ML P+ +T+
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFV 400
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 154/393 (39%), Gaps = 38/393 (9%)
Query: 160 FITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
F+T E E+AL +F E G D SY+++I K + + +I +
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
+ + + LIQ GS+ +A D+F ++ D + + L+ GE A
Sbjct: 112 VRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
D + ++ P+ V+FN LI G + A + M EM + P V+
Sbjct: 172 SFFDGAKD--------MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVT 223
Query: 340 YNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQG 399
YN+++ C+ ++ KA L +M +K I + T+ LM+GL +G
Sbjct: 224 YNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLC-------------CKG 270
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
+ KL +M G P V G+ ++ L K+ AK +L M + P +I
Sbjct: 271 EYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRR--IKPDVVI 328
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
Y+ L+ + T V EA M KP+ A Y ++I CR
Sbjct: 329 YNILVNH---------------LCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCR 373
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
+ + + M+ P + + ++ L
Sbjct: 374 IEDFDSGLNVLNAMLASRHCPTPATFVCMVAGL 406
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 117/261 (44%), Gaps = 8/261 (3%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFG-LLRME--PYLVSFKGVIKELCEKERMEEAKE 71
V N++I+GF + C + + F +L ME P +V++ +I LC + M +AK
Sbjct: 187 VSFNILIKGFLDK----CDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLL 130
++ +M +K + P+ T+ L+ G+C A +L M RG P Y L+ DL
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 131 CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
+D+A + EM P V YN + + RV +A + + M +G P+
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+Y +I FC+ + + L + + P T+ ++ L G+L A + M
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Query: 251 LRGDVSPSNSTYTRLMYAYCL 271
+ ++S + + L+ C+
Sbjct: 423 GKKNLSFGSGAWQNLLSDLCI 443
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 9/241 (3%)
Query: 6 ATLKSFRHMVRMNVMIRGFATESVMS--CKEKKVGETFGLL------RMEPYLVSFKGVI 57
A K F M+ M V S++ C+ +G+ LL R+ P V+F ++
Sbjct: 204 AACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLM 263
Query: 58 KELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLS 117
K LC K EAK+++ +M +G P Y L+ + K + A L +M+ R +
Sbjct: 264 KGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIK 323
Query: 118 PNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGI 176
P+ Y L++ LCT + +AY+V EM G P+ ATY I + E + L +
Sbjct: 324 PDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNV 383
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCL 236
+AM P ++ +++ + G L+ A + +K + + L+ LC+
Sbjct: 384 LNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCI 443
Query: 237 Q 237
+
Sbjct: 444 K 444
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P LV++ ++ +L ++ R++EAK ++ EM ++ + PD YN L+ +C + A
Sbjct: 288 KPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+ +M+++G PN TY +ID C D V N M+AS P+ AT+ + +
Sbjct: 348 VLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLI 407
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC-QDG 203
++ A + M ++ LS ++ ++S C +DG
Sbjct: 408 KGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDG 446
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 173/362 (47%), Gaps = 18/362 (4%)
Query: 7 TLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERM 66
++++F ++R V G A+E+V C + E +G + P ++F VI L K R
Sbjct: 185 SIETFTILIRRYVRA-GLASEAV-HCFNRM--EDYGCV---PDKIAFSIVISNLSRKRRA 237
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
EA+ + + PD Y L+ G C+ + A +++ +M++ G+ PN TY +
Sbjct: 238 SEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIV 296
Query: 127 IDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
ID LC + +A+ VF +M+ SG P+ T+N + ++ + R E+ L +++ M + G
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
PD ++YN +I C+D LE A+++ ++K + T++ + + + + + A
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHR 416
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
++ +M+ P+ TY LM + M + EM + + P++ T+
Sbjct: 417 MYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDK--------EVEPNVNTY 468
Query: 306 NALIHGLCSLERVDEALGILRGM-PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
L+ C + + A + + M E L+P Y VL + +LKK EL +M
Sbjct: 469 RLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMI 528
Query: 365 EK 366
+K
Sbjct: 529 QK 530
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 177/405 (43%), Gaps = 29/405 (7%)
Query: 88 YNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMI 146
YN +I KVR A L D M+ R + + T+ LI L +A FN M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE 206
G +P ++ I+ R +A F ++ +R PD++ Y ++ +C+ GE+
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 207 KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLM 266
+A ++ E GI P+ TYS +I ALC G + A D+F +ML +P+ T+ LM
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 267 YAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILR 326
+ G ++++M+ G PD +T+N LI C E ++ A+ +L
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPD--------TITYNFLIEAHCRDENLENAVKVLN 384
Query: 327 GMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL--SD 384
M + +A ++NT+ + R++ A+ + Y +ME +
Sbjct: 385 TMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRM---------------YSKMMEAKCEPN 429
Query: 385 EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILL 444
VTY+ L+ + + V K+++EM P+ T + + + A +
Sbjct: 430 TVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFK 489
Query: 445 RMISSQCLTMPSYIIYDTLIENCSYV-EFKSAVGLVKDFSTRGLV 488
M+ +CLT PS +Y+ ++ + K LV+ +GLV
Sbjct: 490 EMVEEKCLT-PSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLV 533
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 162/382 (42%), Gaps = 39/382 (10%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
S YN+ I + + A + M R + + ++ +I ++ + G +A+
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
+ G +PD + +S +I L + EA F + L+ P YT L+ +C
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEA-QSFFDSLKDRFEPDVIVYTNLVRGWCRA 268
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
GE S A + EM+ G P++ T++ +I LC ++ A + M + G
Sbjct: 269 GEISEAEKVFKEMKLAGI--------EPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG 320
Query: 333 LSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL 392
+P+A+++N ++ +K EK++ + Y + D +TY+ L+
Sbjct: 321 CAPNAITFNNLM-----------RVHVKAGRTEKVLQV--YNQMKKLGCEPDTITYNFLI 367
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
+ N++ K+ M + ++ T + KK + A + +M+ ++C
Sbjct: 368 EAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC- 426
Query: 453 TMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNL 512
P+ + Y+ L+ +V KS ++K + M + V+P+ Y L
Sbjct: 427 -EPNTVTYNILMR--MFVGSKSTDMVLK-------------MKKEMDDKEVEPNVNTYRL 470
Query: 513 LIFDHCRRGNVNKAYEMYKEMV 534
L+ C G+ N AY+++KEMV
Sbjct: 471 LVTMFCGMGHWNNAYKLFKEMV 492
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 212/463 (45%), Gaps = 47/463 (10%)
Query: 33 KEKKVGETFGLL----RMEPYLVS---FKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
K ++ G +GL+ + P L+ F +++ +++A EV+ EM + GL PD
Sbjct: 143 KMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDE 202
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNE 144
+ L+ +CK ++ A ++++ MR + PN R + SL+ C L +A +V +
Sbjct: 203 YVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQ 261
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ-DG 203
M +G P + + ++ Y + ++ A + + M +RG P++ Y +I C+ +
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEK 321
Query: 204 ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYT 263
+++A+ + E G D VTY+ALI C G + + + + +M + V PS TY
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 264 RLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALG 323
++M A+ +F L ++M+ RG PD +I +N +I C L V EA+
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI--------YNVVIRLACKLGEVKEAVR 433
Query: 324 ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW-LDEY-TYESLMEG 381
+ M GLSP ++ ++ GF L +A EM + I+ +Y T +SL+
Sbjct: 434 LWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNN 493
Query: 382 L---------------------SDEVTYSS---LLNDYFAQGNMQKVFKLEREMTRNGYL 417
L S E+ S+ ++ +A+G++++ +M +
Sbjct: 494 LVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLM 553
Query: 418 PDSVTLGVFINGLNKKATTSIAKGI---LLRMISSQCLTMPSY 457
P T + GLNK +IA I +++M S + ++ Y
Sbjct: 554 PQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKMY 596
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 161/349 (46%), Gaps = 24/349 (6%)
Query: 32 CKEKKVGETFGLL------RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
C+E K+ E +L +EP +V F ++ +M +A +++ +M ++G P+
Sbjct: 247 CREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNV 306
Query: 86 ETYNALICGMCKV-RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFN 143
Y LI +C+ + M A+ ++ +M G + TY +LI C W +DK Y V +
Sbjct: 307 NCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLD 366
Query: 144 EMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
+M G +PS TY + + A+ E+ E+ L + M RG PDL+ YN VI C+ G
Sbjct: 367 DMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLG 426
Query: 204 ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML-RGDVS-PSNST 261
E+++A+ + E G+ P T+ +I QG L EA + F EM+ RG S P T
Sbjct: 427 EVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGT 486
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA 321
L+ + MA + + ++ + ++ + IH L + V EA
Sbjct: 487 LKSLLNNLVRDDKLEMAKDVWSCISNKTSSCEL------NVSAWTIWIHALYAKGHVKEA 540
Query: 322 LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE--LKVEMDEKII 368
M EM L P +Y ++ G L K Y + E+ EK++
Sbjct: 541 CSYCLDMMEMDLMPQPNTYAKLMKG------LNKLYNRTIAAEITEKVV 583
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 172/405 (42%), Gaps = 50/405 (12%)
Query: 183 RGLSPDLVS---YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS 239
R +P+L+ + ++ +F ++KA+E+ E + G+ PD+ + L+ ALC GS
Sbjct: 158 RKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGS 217
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
+ EA +F +M R P+ +T L+Y +C G+ A + +M+ G PD V+
Sbjct: 218 VKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVV--- 273
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI-RELKKAYE 358
F L+ G ++ +A ++ M + G P+ Y ++ C+ + + +A
Sbjct: 274 -----FTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMR 328
Query: 359 LKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLP 418
+ VEM+ D TY +L+ G + G + K + + +M + G +P
Sbjct: 329 VFVEMERYGCEADIVTYTALISG-------------FCKWGMIDKGYSVLDDMRKKGVMP 375
Query: 419 DSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE-NCSYVEFKSAVG 477
VT + KK ++ +M C P +IY+ +I C E K AV
Sbjct: 376 SQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC--HPDLLIYNVVIRLACKLGEVKEAVR 433
Query: 478 LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYG 537
L + GL P + ++I +G + +A +KEMV G
Sbjct: 434 LWNEMEANGL----------------SPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477
Query: 538 FF--PHMFSVLSLIHALYYDRK---NSEMGWVIRNTLRSCNLNDS 577
F P ++ SL++ L D K ++ I N SC LN S
Sbjct: 478 IFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVS 522
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 140/292 (47%), Gaps = 10/292 (3%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P + ++ LC+K+ + A+E + G+ P +TY+ L+ G ++R+ A
Sbjct: 169 IKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGAR 228
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+++D+M R + Y +L+D LC + +D YK+F EM G P ++ FI AY
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ V A + M L P++ ++N +I C++ +++ A + E ++KG PD
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
TY++++ C + A L M R P TY ++ +G F A + +
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE-RVDEALGILRGMPEMGLSP 335
M R +F P++ T+ +IHGL + +++EA M + G+ P
Sbjct: 409 MSER--------KFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 135/297 (45%), Gaps = 21/297 (7%)
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A + FN M+ G P V ++ + + + V A F G+ P +Y+ ++
Sbjct: 156 EACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILV 215
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ + + A ++ E +E+ + D + Y+AL+ ALC G + + +F EM +
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P ++ ++AYC G+ A+ + D M+ +P+ + TFN +I LC E
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPN--------VYTFNHIIKTLCKNE 327
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
+VD+A +L M + G +PD +YN+++ C E+ +A +L MD
Sbjct: 328 KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR----------- 376
Query: 377 SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
+ L D TY+ +L G + ++ M+ + P T V I+GL +K
Sbjct: 377 --TKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRK 431
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 125/293 (42%), Gaps = 20/293 (6%)
Query: 65 RMEEAKEVVREMNRK---GLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
R E R NR G+ P + + L+ +C +++ A E + + + G+ P+ +
Sbjct: 150 RANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAK 209
Query: 122 TYMSLIDLLCTWW-----LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGI 176
TY +L W A KVF+EM+ + + YN + A S V+ +
Sbjct: 210 TY----SILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCL 236
F M GL PD S+ I +C G++ A ++ ++P+ T++ +I+ LC
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK 325
Query: 237 QGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI 296
+ +A+ L EM++ +P TY +M +C E + A L M LPD
Sbjct: 326 NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD--- 382
Query: 297 QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
T+N ++ L + R D A I GM E P +Y ++ G +
Sbjct: 383 -----RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVR 430
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 148/352 (42%), Gaps = 26/352 (7%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A +++M G+ P L+ LC ++ A + F + G +PS TY+ +
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ A +F M ER DL++YNA++ C+ G+++ ++ E G+ P
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKP 276
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
D +++ I A C G + A+ + M R D+ P+ T+ ++ C + A+ L
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
DEM +G PD T+N+++ C V+ A +L M PD +YN
Sbjct: 337 DEMIQKGANPD--------TWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNM 388
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
VL +I +A E+ M E+ + TY ++ GL + +G ++
Sbjct: 389 VLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRK------------KGKLE 436
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFIN---GLNKKATTSIAKGILLRMISSQC 451
+ + M G P S T+ + N G + + G + R SS C
Sbjct: 437 EACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMER--SSSC 486
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 10/242 (4%)
Query: 9 KSFRHMVRMNVMIRGFATESVMS--CKEKKVG------ETFGLLRMEPYLVSFKGVIKEL 60
K F M+ N ++ A +++ CK V + G L ++P SF I
Sbjct: 229 KVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAY 288
Query: 61 CEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNE 120
C+ + A +V+ M R L P+ T+N +I +CK + A L D+M +G +P+
Sbjct: 289 CDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDT 348
Query: 121 RTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSA 179
TY S++ C +++A K+ + M + LP TYN + + R ++A I+
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 180 MAERGLSPDLVSYNAVISKFC-QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
M+ER P + +Y +I + G+LE+A +++GI P T L L G
Sbjct: 409 MSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWG 468
Query: 239 SL 240
+
Sbjct: 469 QM 470
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 31/271 (11%)
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
P + + L+H LC + V+ A G+ P A +Y+ ++ G+ +IR+ A ++
Sbjct: 171 PCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKV 230
Query: 360 KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
EM E+ +D Y +L++ L G++ +K+ +EM G PD
Sbjct: 231 FDEMLERNCVVDLLAYNALLDALC-------------KSGDVDGGYKMFQEMGNLGLKPD 277
Query: 420 SVTLGVFINGLNKKATTSIAKGILLRM---------------ISSQCLTMP---SYIIYD 461
+ + +FI+ A +L RM I + C +Y++ D
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD 337
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
+I+ + + + ++ VN A RM PD YN+++ R G
Sbjct: 338 EMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIG 397
Query: 522 NVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
++A E+++ M F+P + + +IH L
Sbjct: 398 RFDRATEIWEGMSERKFYPTVATYTVMIHGL 428
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 195/443 (44%), Gaps = 33/443 (7%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +++ VI + + +EA ++ M G P+ TYNA++ + K +++
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLS 166
M+ G SPN T+ +++ L +DK +VF EM + GF P T+N I+AY
Sbjct: 444 LCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGR 503
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
A ++ M G + + +YNA+++ + G+ + ++ KG P + +
Sbjct: 504 CGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETS 563
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA----YCLVGEFSMAFHLH 282
YS ++Q G+ + + G + PS L+ A L G AF L
Sbjct: 564 YSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGS-ERAFTL- 621
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
+ G+ PD VI FN+++ D+A GIL + E GLSPD V+YN+
Sbjct: 622 --FKKHGYKPDMVI--------FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ + + E KA E+ +++ + D V+Y++++ + +G MQ
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQL-------------KPDLVSYNTVIKGFCRRGLMQ 718
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
+ ++ EMT G P T F++G + + ++ M + C P+ + +
Sbjct: 719 EAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC--RPNELTFKM 776
Query: 463 LIEN-CSYVEFKSAVGLVKDFST 484
+++ C ++ A+ V T
Sbjct: 777 VVDGYCRAGKYSEAMDFVSKIKT 799
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 122/550 (22%), Positives = 223/550 (40%), Gaps = 92/550 (16%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKV-RNMLCAVELYDQMRVRGLSPNERTY 123
+ E+A ++ M G +P TYN ++ K+ R+ + + D+MR +GL +E T
Sbjct: 225 KYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTC 284
Query: 124 MSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
+++ L +A + F E+ + G+ P TYN + + + +AL + M E
Sbjct: 285 STVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE 242
D V+YN +++ + + G ++A + +KG++P+ +TY+ +I A G E
Sbjct: 345 NSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE 404
Query: 243 AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD---EMRHRGFLPDFVIQFS 299
A LF M P+ TY ++ L+G+ S + + +M+ G S
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVL---SLLGKKSRSNEMIKMLCDMKSNGC--------S 453
Query: 300 PSLVTFNALIHGLCSLERVDEALG-ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
P+ T+N ++ LC + +D+ + + R M G PD ++NT++ + + A +
Sbjct: 454 PNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASK 512
Query: 359 LKVEMDEKIIWLDEYTYESLMEGLS----------------------DEVTYSSLLNDYF 396
+ EM TY +L+ L+ E +YS +L Y
Sbjct: 513 MYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 397 AQGNMQKVFKLEREMT-----------------------------------RNGYLPDSV 421
GN + ++E + ++GY PD V
Sbjct: 573 KGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMV 632
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKD 481
++ + A+GIL I L+ P + Y++L++ YV
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGIL-ESIREDGLS-PDLVTYNSLMD--MYVR---------- 678
Query: 482 FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPH 541
RG +A + + +KPD YN +I CRRG + +A M EM G P
Sbjct: 679 ---RGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC 735
Query: 542 MFSVLSLIHA 551
+F+ + +
Sbjct: 736 IFTYNTFVSG 745
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 171/416 (41%), Gaps = 74/416 (17%)
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A K+ +++ +L V Y + AY + + E+A+ +F M E G SP LV+YN ++
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 198 KFCQDGE-LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
F + G K L + E KG+ D+ T S ++ A +G L EA + F E+
Sbjct: 254 VFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL------ 307
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
C + P VT+NAL+
Sbjct: 308 -----------KSC--------------------------GYEPGTVTYNALLQVFGKAG 330
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
EAL +L+ M E D+V+YN ++ + + K+A + M +K +
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV-------- 382
Query: 377 SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATT 436
+ + +TY+++++ Y G + KL M G +P++ T ++ L KK+ +
Sbjct: 383 -----MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 437 SIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHE 496
+ +L M S+ C P+ ++T++ C +G+
Sbjct: 438 NEMIKMLCDMKSNGC--SPNRATWNTMLALCG---------------NKGMDKFVNRVFR 480
Query: 497 RMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
M + +PD +N LI + R G+ A +MY EM GF + + +L++AL
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVE-LYDQMRVRGLSPNERTYMSLIDLLCT---- 132
+ G PD +N+++ + NM E + + +R GLSP+ TY SL+D+
Sbjct: 624 KHGYKPDMVIFNSMLSIFTR-NNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGEC 682
Query: 133 WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
W KA ++ + S P + +YN I + +++A+ + S M ERG+ P + +Y
Sbjct: 683 W---KAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTY 739
Query: 193 NAVISKFCQDG---ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
N +S + G E+E +E A+ P+++T+ ++ C G EA D +
Sbjct: 740 NTFVSGYTAMGMFAEIEDVIECMAKN---DCRPNELTFKMVVDGYCRAGKYSEAMDFVSK 796
Query: 250 MLRGDVSPSNSTYTRL 265
+ D + + RL
Sbjct: 797 IKTFDPCFDDQSIQRL 812
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 20/341 (5%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F G++K C++ EEA + EM +KG+ + YN L+ K ++ L+ +MR
Sbjct: 347 FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 113 VRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV- 170
+GL P+ TY L+D D + EM G P+V +Y I+AY ++++
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMS 466
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
+ A F M + GL P SY A+I + G EKA E ++GI P TY+++
Sbjct: 467 DMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSV 526
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
+ A G + +++ MLR + + TY L+ + G L+ E R
Sbjct: 527 LDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG-------LYIEAR---- 575
Query: 291 LPDFVIQFS-----PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
D V +FS PS++T+N L++ + + +L+ M + L PD+++Y+T+++
Sbjct: 576 --DVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIY 633
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV 386
F ++R+ K+A+ M + D +YE L L D+
Sbjct: 634 AFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKA 674
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 167/418 (39%), Gaps = 78/418 (18%)
Query: 84 DCETYNALICGMCKVR--------------------NMLCAV----------------EL 107
D YNA I G+ + N+ CA+ E+
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+++M +G+ ++ + L+ C L ++A + EM G + YN + AY
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
S +E+ G+F+ M ++GL P +YN ++ + + + + + E + G+ P+ +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 227 YSALIQALCLQGSLPE-AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y+ LI A + + A D FL M + + PS+ +YT L++AY + G A+ +EM
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 286 RHRGFLPDFVI---------------------------QFSPSLVTFNALIHGLCSLERV 318
G P + + +T+N L+ G
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
EA ++ +MGL P ++YN ++ + + + K +L EM +
Sbjct: 572 IEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEM-------------AA 618
Query: 379 MEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATT 436
+ D +TYS+++ + + ++ F + M ++G +PD + L KA T
Sbjct: 619 LNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKT 676
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 186/458 (40%), Gaps = 43/458 (9%)
Query: 154 VATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKAL-EIK 212
V YN I+ +S+R + A ++ AM + + PD V+ +I+ + G K + EI
Sbjct: 273 VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIF 332
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
+ EKG+ + L+++ C +G EA + EM + + + Y LM AY
Sbjct: 333 EKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKS 392
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
L EMR +G PS T+N L+ + D +LR M ++G
Sbjct: 393 NHIEEVEGLFTEMRDKGL--------KPSAATYNILMDAYARRMQPDIVETLLREMEDLG 444
Query: 333 LSPDAVSYNTVLFGFCQIRELKK-AYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSL 391
L P+ SY ++ + + +++ A + + M K + L ++ +Y++L
Sbjct: 445 LEPNVKSYTCLISAYGRTKKMSDMAADAFLRM--KKVGLKPSSH-----------SYTAL 491
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC 451
++ Y G +K + EM + G P T ++ + T I M+ +
Sbjct: 492 IHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKI 551
Query: 452 LTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
+ I Y+TL++ F+ +GL EA M ++P YN
Sbjct: 552 KG--TRITYNTLLDG---------------FAKQGLYIEARDVVSEFSKMGLQPSVMTYN 594
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRS 571
+L+ + R G K ++ KEM P + ++I+A R + + ++S
Sbjct: 595 MLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKS 654
Query: 572 CNLNDSELHQVLNEIEVKKCKIDALLNALAKIAVDGML 609
+ D ++ L I K K N K A+ G++
Sbjct: 655 GQVPDPRSYEKLRAILEDKAKTK---NRKDKTAILGII 689
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 182/439 (41%), Gaps = 56/439 (12%)
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
V LY+ + GLS ++R D A++V+ M P T IT
Sbjct: 273 VRLYNAA-ISGLSASQR-------------YDDAWEVYEAMDKINVYPDNVTCAILITTL 318
Query: 165 LSSER-VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ R ++ IF M+E+G+ + ++ FC +G E+AL I+ E +KGI +
Sbjct: 319 RKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSN 378
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+ Y+ L+ A + E LF EM + PS +TY LM AY + + L
Sbjct: 379 TIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLR 438
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERV-DEALGILRGMPEMGLSPDAVSYNT 342
EM G P++ ++ LI +++ D A M ++GL P + SY
Sbjct: 439 EMEDLG--------LEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTA 490
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV-TYSSLLNDYFAQGNM 401
++ + +KAY EM EG+ V TY+S+L+ + G+
Sbjct: 491 LIHAYSVSGWHEKAYASFEEM--------------CKEGIKPSVETYTSVLDAFRRSGDT 536
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
K+ ++ + M R +T ++G K+ A+ ++ S+ PS + Y+
Sbjct: 537 GKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEF--SKMGLQPSVMTYN 594
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
L+ +Y L + L+ E M +++KPD Y+ +I+ R
Sbjct: 595 MLMN--AYARGGQDAKLPQ------LLKE-------MAALNLKPDSITYSTMIYAFVRVR 639
Query: 522 NVNKAYEMYKEMVHYGFFP 540
+ +A+ +K MV G P
Sbjct: 640 DFKRAFFYHKMMVKSGQVP 658
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 166/379 (43%), Gaps = 44/379 (11%)
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
KA K F + +GF P +++ VE+A+ +++ + + G+S +V+ N+V+
Sbjct: 130 KAAKSF--LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVL 187
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ +L++ E+ E VE D LI+ALC G + E ++L + L+ +
Sbjct: 188 LGCLKARKLDRFWELHKEMVESEF--DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLD 245
Query: 257 PSNSTYTRLMYAYCLVGEFS-MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
P Y +L+ +C +G ++ M+ LH + F PS+ + +I GLC
Sbjct: 246 PGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF---------PSMYIYQKIIKGLCMN 296
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
++ EA I + + + G +PD V Y T++ GFC+ L A +L EM +K + +E+ Y
Sbjct: 297 KKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAY 356
Query: 376 ESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT 435
++ G +F +G + V EM RNGY ++ I G
Sbjct: 357 NVMIHG-------------HFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGK 403
Query: 436 TSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
+ A I M S+ P+ I Y+ LI K F V + +
Sbjct: 404 SDEAFEIFKNM--SETGVTPNAITYNALI---------------KGFCKENKVEKGLKLY 446
Query: 496 ERMHNMSVKPDGAVYNLLI 514
+ + + +KP G Y L+
Sbjct: 447 KELKALGLKPSGMAYAALV 465
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 52/315 (16%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
+I+ LC+ + E E++++ ++GL P Y LI G C++ N C E
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSE--------- 269
Query: 116 LSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
V + MIA PS+ Y K I +++ +A
Sbjct: 270 -------------------------VLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYC 304
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
IF + ++G +PD V Y +I FC+ G L A ++ E ++KG+ P++ Y+ +I
Sbjct: 305 IFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHF 364
Query: 236 LQG--SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
+G SL EAF + EMLR + + ++ +C G+ AF + M G
Sbjct: 365 KRGEISLVEAF--YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETG---- 418
Query: 294 FVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
+P+ +T+NALI G C +V++ L + + + +GL P ++Y + +R L
Sbjct: 419 ----VTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL------VRNL 468
Query: 354 KKAYELKVEMDEKII 368
K + + ++ +I+
Sbjct: 469 KMSDSVATSLNLEIV 483
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 14/258 (5%)
Query: 16 RMNVMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEA 69
R+ +IR C V E + LL+ ++P + +I CE
Sbjct: 215 RIRCLIRAL-------CDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACM 267
Query: 70 KEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL 129
EV+ M P Y +I G+C + L A ++ ++ +G +P+ Y ++I
Sbjct: 268 SEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRG 327
Query: 130 LC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
C WL A K++ EMI G P+ YN I + + ++ M G
Sbjct: 328 FCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGT 387
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
++S N +I FC G+ ++A EI E G+ P+ +TY+ALI+ C + + + L+
Sbjct: 388 MLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYK 447
Query: 249 EMLRGDVSPSNSTYTRLM 266
E+ + PS Y L+
Sbjct: 448 ELKALGLKPSGMAYAALV 465
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 114/290 (39%), Gaps = 37/290 (12%)
Query: 298 FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
F P + L V+EA+ + + +MG+S V+ N+VL G + R+L + +
Sbjct: 141 FKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFW 200
Query: 358 ELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
EL EM E D L+ L D G++ + ++L ++ + G
Sbjct: 201 ELHKEMVESE--FDSERIRCLIRALCD-------------GGDVSEGYELLKQGLKQGLD 245
Query: 418 PDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENC--------SY 469
P I+G + + +L MI+ PS IY +I+ +Y
Sbjct: 246 PGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN--HFPSMYIYQKIIKGLCMNKKQLEAY 303
Query: 470 VEFKSA------------VGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDH 517
FK+ +++ F +G + A M ++P+ YN++I H
Sbjct: 304 CIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGH 363
Query: 518 CRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRN 567
+RG ++ Y EM+ G+ M S ++I K+ E + +N
Sbjct: 364 FKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKN 413
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 141/298 (47%), Gaps = 10/298 (3%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
++ ++ L ++ E +++ EM R G P+ TYN LI + + A+ +++QM
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
+ G P+ TY +LID+ +LD A ++ M +G P TY+ I + +
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
A +F M +G +P+LV++N +I+ + E AL++ + G PD VTYS +
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
++ L G L EA +F EM R + P Y L+ + G A+ + M G
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
P+ + T N+L+ + R+ EA +L+ M +GL P +Y T+L C
Sbjct: 601 RPN--------VPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTY-TLLLSCC 649
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 130/278 (46%), Gaps = 10/278 (3%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P V++ +I ++EA V +M G PD TY LI K + A++
Sbjct: 391 KPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+Y +M+ GLSP+ TY +I+ L L A+++F EM+ G P++ T+N I +
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHA 510
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ E AL ++ M G PD V+Y+ V+ G LE+A + AE K +PD+
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEP 570
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y L+ G++ +A+ + ML+ + P+ T L+ + V S A++L M
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALG 323
+ PSL T+ L+ C+ R + +G
Sbjct: 631 --------LALGLHPSLQTYTLLL-SCCTDARSNFDMG 659
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 28/280 (10%)
Query: 112 RVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
R G + TY +++ +L + K+ +EM+ G P+ TYN+ I +Y + +
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
++A+ +F+ M E G PD V+Y +I + G L+ A+++ E G+ PD TYS +
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
I L G LP A LF EM+ +P+ T+ ++ + + A L+ +M++ GF
Sbjct: 471 INCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGF 530
Query: 291 LPDFVI---------------------------QFSPSLVTFNALIHGLCSLERVDEALG 323
PD V + P + L+ VD+A
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 324 ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+ M + GL P+ + N++L F ++ + +AY L M
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 27/322 (8%)
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
GF TY + +++ + + M G P+ V+YN +I + + L++A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
+ + + E G PD VTY LI G L A D++ M +SP TY+ ++
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
G A L EM +G +P+LVTFN +I + AL + R M
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQG--------CTPNLVTFNIMIALHAKARNYETALKLYRDM 525
Query: 329 PEMGLSPDAVSYNTVL--FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV 386
G PD V+Y+ V+ G C L++A + EM K W + DE
Sbjct: 526 QNAGFQPDKVTYSIVMEVLGHCGF--LEEAEGVFAEMQRK-NW------------VPDEP 570
Query: 387 TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
Y L++ + GN+ K ++ + M + G P+ T ++ + S A +L M
Sbjct: 571 VYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Query: 447 ISSQCLTMPSYIIYDTLIENCS 468
++ PS Y L+ C+
Sbjct: 631 LA--LGLHPSLQTYTLLLSCCT 650
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 144/349 (41%), Gaps = 42/349 (12%)
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
+ G D TY+ ++ L E L EM+R P+ TY RL+++Y
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A ++ ++M+ G PD VT+ LI +D A+ + + M E GLSPD
Sbjct: 412 EAMNVFNQMQEAGCEPD--------RVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPD 463
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE-VTYSSLLNDY 395
+Y+ ++ + L A+ L EM + +G + VT++ ++ +
Sbjct: 464 TFTYSVIINCLGKAGHLPAAHRLFCEM--------------VGQGCTPNLVTFNIMIALH 509
Query: 396 FAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP 455
N + KL R+M G+ PD VT + + L A+G+ M
Sbjct: 510 AKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM--------- 560
Query: 456 SYIIYDTLIENCSYVEFKSAVGLVKD-FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
+ ++V + GL+ D + G V++A ++ M ++P+ N L+
Sbjct: 561 ---------QRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLL 611
Query: 515 FDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGW 563
R +++AY + + M+ G P + + L+ R N +MG+
Sbjct: 612 STFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFDMGF 660
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 3/188 (1%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P ++ +I L + + A + EM +G P+ T+N +I K RN A+
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+LY M+ G P++ TY ++++L C +L++A VF EM ++P Y +
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCG-FLEEAEGVFAEMQRKNWVPDEPVYGLLVDL 578
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + V++A + AM + GL P++ + N+++S F + + +A + + G+ P
Sbjct: 579 WGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPS 638
Query: 224 DVTYSALI 231
TY+ L+
Sbjct: 639 LQTYTLLL 646
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 189/434 (43%), Gaps = 36/434 (8%)
Query: 23 GFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLA 82
G ESV K+ + L +E + S+ + K + + R AK +M +G+
Sbjct: 199 GIVQESV------KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVE 252
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKV 141
P TYN ++ G + A+ ++ M+ RG+SP++ T+ ++I+ C + +D+A K+
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 142 FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
F EM + PSV +Y I YL+ +RV+ L IF M G+ P+ +Y+ ++ C
Sbjct: 313 FVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCD 372
Query: 202 DGELEKALEIKAETVEKGILP-DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
G++ +A I + K I P D+ + L+ + G + A ++ M +V
Sbjct: 373 AGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAG 432
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDE-------MRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
Y L+ C ++ A L D +RH+ L + PS +N +I LC
Sbjct: 433 HYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTL-----EMEPS--AYNPIIEYLC 485
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
+ + +A + R + + G+ D + N ++ G + +YE+ M + + +
Sbjct: 486 NNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESN 544
Query: 374 TYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKK 433
YE L++ Y ++G M +G++PDS I L +
Sbjct: 545 AYELLIKS-------------YMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFED 591
Query: 434 ATTSIAKGILLRMI 447
A +++ MI
Sbjct: 592 GRVQTASRVMMIMI 605
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 185/447 (41%), Gaps = 54/447 (12%)
Query: 104 AVELYDQMRVRGLSPNER-TYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFI 161
A++ + GL ++R T+M +I +L L+ A + +M G + I
Sbjct: 133 ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLI 192
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
+Y + V++++ IF M + G+ + SYN++ + G A + V +G+
Sbjct: 193 ESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVE 252
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
P TY+ ++ L L A F +M +SP ++T+ ++ +C + A L
Sbjct: 253 PTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL 312
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
EM+ + PS+V++ +I G +++RVD+ L I M G+ P+A +Y+
Sbjct: 313 FVEMKGN--------KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYS 364
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM 401
T+L G C ++ +A + M K I D + LL G+M
Sbjct: 365 TLLPGLCDAGKMVEAKNILKNMMAKHI------------APKDNSIFLKLLVSQSKAGDM 412
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT---------TSIAKGILLRMISSQCL 452
++ + M ++ GV I K + T I K I+LR L
Sbjct: 413 AAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILR--HQDTL 470
Query: 453 TM-PSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVY 510
M PS Y+ +IE C+ + A L + RG+ ++ A+
Sbjct: 471 EMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDAL----------------- 511
Query: 511 NLLIFDHCRRGNVNKAYEMYKEMVHYG 537
N LI H + GN + +YE+ K M G
Sbjct: 512 NNLIRGHAKEGNPDSSYEILKIMSRRG 538
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 113/506 (22%), Positives = 204/506 (40%), Gaps = 25/506 (4%)
Query: 64 ERMEEAKEVVREMNRKGL-APDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERT 122
+++E A + R R GL D +T+ +I + +V + A + M +G+ +E
Sbjct: 128 KKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDM 187
Query: 123 YMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMA 181
++ LI+ + ++ K+F +M G ++ +YN L R A F+ M
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 182 ERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLP 241
G+ P +YN ++ F LE AL + +GI PDD T++ +I C +
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 242 EAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
EA LF+EM + PS +YT ++ Y V + +EMR G P+
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGI--------EPN 359
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSP-DAVSYNTVLFGFCQIRELKKAYELK 360
T++ L+ GLC ++ EA IL+ M ++P D + +L + ++ A E+
Sbjct: 360 ATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVL 419
Query: 361 VEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLN--DYFAQGNMQKVFKLEREMTRNGYLP 418
M + + Y L+E Y+ + D + + + EM + Y P
Sbjct: 420 KAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNP 479
Query: 419 ---------DSVTLGVFINGLNKKATTSI-AKGILLRMISSQCLTMPSYIIYDTLIENCS 468
+ V L K+ A L+R + + SY I +
Sbjct: 480 IIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGV 539
Query: 469 YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYE 528
E + L+K + ++G +A A + M PD +++ +I G V A
Sbjct: 540 PRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASR 599
Query: 529 MYKEMV--HYGFFPHMFSVLSLIHAL 552
+ M+ + G +M + ++ AL
Sbjct: 600 VMMIMIDKNVGIEDNMDLIAKILEAL 625
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 94/477 (19%), Positives = 197/477 (41%), Gaps = 53/477 (11%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P +F +I C ++M+EA+++ EM + P +Y +I G V + +
Sbjct: 286 ISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGL 345
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLP-SVATYNKFITA 163
++++MR G+ PN TY +L+ LC + +A + M+A P + + K + +
Sbjct: 346 RIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVS 405
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL-- 221
+ + A + AMA + + Y +I C+ +A+++ +EK I+
Sbjct: 406 QSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILR 465
Query: 222 ------PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
+ Y+ +I+ LC G +A LF ++++ V ++ L+ + G
Sbjct: 466 HQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDA-LNNLIRGHAKEGNP 524
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
++ + M RG V + S + + LI S +A L M E G P
Sbjct: 525 DSSYEILKIMSRRG-----VPRESNA---YELLIKSYMSKGEPGDAKTALDSMVEDGHVP 576
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTY-SSLLND 394
D+ + +V+ + ++ A + + M +K + G+ D + + +L
Sbjct: 577 DSSLFRSVIESLFEDGRVQTASRVMMIMIDKNV------------GIEDNMDLIAKILEA 624
Query: 395 YFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL----------- 443
+G++++ + +NG+ D L ++ L++K T A +L
Sbjct: 625 LLMRGHVEEALGRIDLLNQNGHTAD---LDSLLSVLSEKGKTIAALKLLDFGLERDLSLE 681
Query: 444 -------LRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAI 493
L + T+ +Y + ++E S ++KS+ L+K + G +A +
Sbjct: 682 FSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQADV 738
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 153/323 (47%), Gaps = 17/323 (5%)
Query: 33 KEKKVGETFGLL----RMEPYLVS---FKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
K ++ G +GL+ + P L+ F +++ + +++A EV+ EM + G PD
Sbjct: 159 KMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDE 218
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNE 144
+ L+ +CK ++ A +L++ MR+R N R + SL+ C + +A V +
Sbjct: 219 YVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQ 277
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M +GF P + Y ++ Y ++ ++ A + M RG P+ Y +I C+
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDR 337
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+E+A+++ E D VTY+AL+ C G + + + + +M++ + PS TY
Sbjct: 338 MEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMH 397
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
+M A+ F L ++MR I++ P + +N +I C L V EA+ +
Sbjct: 398 IMVAHEKKESFEECLELMEKMRQ--------IEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 325 LRGMPEMGLSPDAVSYNTVLFGF 347
M E GLSP ++ ++ G
Sbjct: 450 WNEMEENGLSPGVDTFVIMINGL 472
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 182/431 (42%), Gaps = 50/431 (11%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS---YNAVISKFCQDGELEKAL 209
S+ Y + + G+ M R +P L+ + ++ +F ++KA+
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEM--RKENPQLIEPELFVVLVQRFASADMVKKAI 203
Query: 210 EIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAY 269
E+ E + G PD+ + L+ ALC GS+ +A LF +M R + +T L+Y +
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGW 262
Query: 270 CLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMP 329
C VG+ A ++ +M GF PD +V + L+ G + ++ +A +LR M
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPD--------IVDYTNLLSGYANAGKMADAYDLLRDMR 314
Query: 330 EMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYS 389
G P+A Y ++ C++ +++A ++ VEM+ E +D VTY+
Sbjct: 315 RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMER-------------YECEADVVTYT 361
Query: 390 SLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISS 449
+L++ + G + K + + +M + G +P +T + KK + ++ +M
Sbjct: 362 ALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM--R 419
Query: 450 QCLTMPSYIIYDTLIE-NCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGA 508
Q P IY+ +I C E K AV L + GL P
Sbjct: 420 QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGL----------------SPGVD 463
Query: 509 VYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP-HMFSVLSLIHALYYDRKNSEMG---WV 564
+ ++I +G + +A + +KEMV G F + L L+ K EM W
Sbjct: 464 TFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWS 523
Query: 565 IRNTLRSCNLN 575
+ +C LN
Sbjct: 524 CITSKGACELN 534
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 11/316 (3%)
Query: 19 VMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNR 78
V+++ FA+ ++ K +V + EP F ++ LC+ +++A ++ +M R
Sbjct: 188 VLVQRFASADMVK-KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-R 245
Query: 79 KGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDK 137
+ + +L+ G C+V M+ A + QM G P+ Y +L+ +
Sbjct: 246 MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 305
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
AY + +M GF P+ Y I A +R+E+A+ +F M D+V+Y A++S
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
FC+ G+++K + + ++KG++P ++TY ++ A + S E +L +M + + P
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 425
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
Y ++ C +GE A L +EM G SP + TF +I+GL S
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENG--------LSPGVDTFVIMINGLASQGC 477
Query: 318 VDEALGILRGMPEMGL 333
+ EA + M GL
Sbjct: 478 LLEASDHFKEMVTRGL 493
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 9/271 (3%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLD 136
++ P+ TY L+ G C+VRN++ A +++ M GL P+ + +++ LL +
Sbjct: 290 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 349
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A K+F+ M + G P+V +Y I + +E A+ F M + GL PD Y +I
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 409
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ F +L+ E+ E EKG PD TY+ALI+ + Q ++ +M++ ++
Sbjct: 410 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 469
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
PS T+ +M +Y + + M + DEM +G PD ++ LI GL S
Sbjct: 470 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD--------DNSYTVLIRGLISEG 521
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
+ EA L M + G+ + YN F
Sbjct: 522 KSREACRYLEEMLDKGMKTPLIDYNKFAADF 552
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 154/355 (43%), Gaps = 26/355 (7%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK 137
R+G A D TYN+++ + K R V + ++M +GL E +++ K
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 246
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A +F M F V T N + + ++ ++A +F + ER +P++++Y +++
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLN 305
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
+C+ L +A I + ++ G+ PD V ++ +++ L +A LF M P
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
+ +YT ++ +C A D+M G PD + + LI G + ++
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV--------YTCLITGFGTQKK 417
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
+D +L+ M E G PD +YN + +K+ ++K+ Y
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNAL---------------IKLMANQKMPEHGTRIYNK 462
Query: 378 LMEGLSDEV--TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL 430
+++ + T++ ++ YF N + + EM + G PD + V I GL
Sbjct: 463 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 517
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 163/419 (38%), Gaps = 47/419 (11%)
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
GF TYN ++ + + E + + M +GL + ++ + F E +KA
Sbjct: 189 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 247
Query: 209 LEIKAETVEKGILPDDV-TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
+ I E ++K V T + L+ +L + L + + + L+ +P+ TYT L+
Sbjct: 248 VGI-FELMKKYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 305
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
+C V A + ++M G PD +V N ++ GL + +A+ +
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPD--------IVAHNVMLEGLLRSMKKSDAIKLFHV 357
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVT 387
M G P+ SY ++ FC+ ++ A E + D+ L D
Sbjct: 358 MKSKGPCPNVRSYTIMIRDFCKQSSMETAIE----------YFDDMVDSGLQ---PDAAV 404
Query: 388 YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMI 447
Y+ L+ + Q + V++L +EM G+ PD T I + + I +MI
Sbjct: 405 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 464
Query: 448 SSQC--------LTMPSYI----------IYDTLIENCSYVEFKSAVGLVKDFSTRGLVN 489
++ + M SY ++D +I+ + S L++ + G
Sbjct: 465 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 524
Query: 490 EAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSL 548
EA E M + +K YN D R G E+++E+ F F+ +
Sbjct: 525 EACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSGKFAAAEI 579
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 124/319 (38%), Gaps = 43/319 (13%)
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
R + + TY +M +F + +EM +G L ++ TF +
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL---------TMETFTIAMKA 237
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
+ + +A+GI M + + N +L + + K+A L ++ E+
Sbjct: 238 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--- 294
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
+ +TY+ LLN + N+ + ++ +M +G PD V V + GL
Sbjct: 295 -----------PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 343
Query: 432 KKATTSIAKGILLRMIS-SQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNE 490
+ S A + M S C + SY I +++DF + +
Sbjct: 344 RSMKKSDAIKLFHVMKSKGPCPNVRSYTI------------------MIRDFCKQSSMET 385
Query: 491 AAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIH 550
A + M + ++PD AVY LI + ++ YE+ KEM G P + +LI
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 551 ALYYDRKNSEMGWVIRNTL 569
L ++K E G I N +
Sbjct: 446 -LMANQKMPEHGTRIYNKM 463
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 9/271 (3%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLD 136
++ P+ TY L+ G C+VRN++ A +++ M GL P+ + +++ LL +
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKS 350
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A K+F+ M + G P+V +Y I + +E A+ F M + GL PD Y +I
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ F +L+ E+ E EKG PD TY+ALI+ + Q ++ +M++ ++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 470
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
PS T+ +M +Y + + M + DEM +G PD ++ LI GL S
Sbjct: 471 PSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPD--------DNSYTVLIRGLISEG 522
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
+ EA L M + G+ + YN F
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 153/355 (43%), Gaps = 26/355 (7%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK 137
R+G A TYN+++ + K R V + ++M +GL E +++ K
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A +F M F V T N + + ++ ++A +F + ER +P++++Y +++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLN 306
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
+C+ L +A I + ++ G+ PD V ++ +++ L +A LF M P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 366
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
+ +YT ++ +C A D+M G PD + + LI G + ++
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV--------YTCLITGFGTQKK 418
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
+D +L+ M E G PD +YN + +K+ ++K+ Y
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNAL---------------IKLMANQKMPEHGTRIYNK 463
Query: 378 LMEGLSDEV--TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL 430
+++ + T++ ++ YF N + + EM + G PD + V I GL
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGL 518
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 147/334 (44%), Gaps = 9/334 (2%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
++ ++ L + + E V+ EM KGL ET+ + + AV +++ M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFELM 255
Query: 112 RVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
+ T L+D L L K +V + + F P++ TY + + +
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLI 315
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
+A I++ M + GL PD+V++N ++ + + A+++ KG P+ +Y+ +I
Sbjct: 316 EAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMI 375
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
+ C Q S+ A + F +M+ + P + YT L+ + + + L EM+ +G
Sbjct: 376 RDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHP 435
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
PD T+NALI + + + + I M + + P ++N ++ + R
Sbjct: 436 PDGK--------TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 487
Query: 352 ELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE 385
+ + EM +K I D+ +Y L+ GL E
Sbjct: 488 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISE 521
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 164/419 (39%), Gaps = 47/419 (11%)
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
GF + TYN ++ + + E + + M +GL + ++ + F E +KA
Sbjct: 190 GFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKA 248
Query: 209 LEIKAETVEKGILPDDV-TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
+ I E ++K V T + L+ +L + L + + + L+ +P+ TYT L+
Sbjct: 249 VGI-FELMKKYKFKIGVETINCLLDSLG-RAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 306
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
+C V A + ++M G PD +V N ++ GL + +A+ +
Sbjct: 307 GWCRVRNLIEAARIWNDMIDHGLKPD--------IVAHNVMLEGLLRSMKKSDAIKLFHV 358
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVT 387
M G P+ SY ++ FC+ + M+ I + D+ L D
Sbjct: 359 MKSKGPCPNVRSYTIMIRDFCK----------QSSMETAIEYFDDMVDSGLQ---PDAAV 405
Query: 388 YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMI 447
Y+ L+ + Q + V++L +EM G+ PD T I + + I +MI
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMI 465
Query: 448 SSQC--------LTMPSYI----------IYDTLIENCSYVEFKSAVGLVKDFSTRGLVN 489
++ + M SY ++D +I+ + S L++ + G
Sbjct: 466 QNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSR 525
Query: 490 EAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSL 548
EA E M + +K YN D R G E+++E+ F F+ +
Sbjct: 526 EACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSGKFAAAEI 580
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 125/319 (39%), Gaps = 43/319 (13%)
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
R + ++ TY +M +F + +EM +G L ++ TF +
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL---------TMETFTIAMKA 238
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
+ + +A+GI M + + N +L + + K+A L ++ E+
Sbjct: 239 FAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFT--- 295
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
+ +TY+ LLN + N+ + ++ +M +G PD V V + GL
Sbjct: 296 -----------PNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 344
Query: 432 KKATTSIAKGILLRMIS-SQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNE 490
+ S A + M S C + SY I +++DF + +
Sbjct: 345 RSMKKSDAIKLFHVMKSKGPCPNVRSYTI------------------MIRDFCKQSSMET 386
Query: 491 AAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIH 550
A + M + ++PD AVY LI + ++ YE+ KEM G P + +LI
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 551 ALYYDRKNSEMGWVIRNTL 569
L ++K E G I N +
Sbjct: 447 -LMANQKMPEHGTRIYNKM 464
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 131/572 (22%), Positives = 247/572 (43%), Gaps = 61/572 (10%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + ++ V++ + ++ + A + EM ++ LAPD TY+ LI K A+
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 108 YDQMRVRGLSPNERTYMSLIDL---LCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+M +S + Y +LI+L LC + KA +F+ + SG P + YN I Y
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDY--SKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
++ +A + M E G+ P+ VSY+ ++S + ++ + +AL + AE E D
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
T + +I + EA LF + + D+ P+ +Y ++ Y F A HL
Sbjct: 331 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 390
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
M+ + ++VT+N +I ++A +++ M G+ P+A++Y+T++
Sbjct: 391 MQRKD--------IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTII 442
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
+ + +L +A L ++ + +D+ Y++++ V Y + G M
Sbjct: 443 SIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI------VAYERV-------GLMGHA 489
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
+L E+ LPD++ I L K T A + + S + D +
Sbjct: 490 KRLLHELK----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGE-------VKDISV 538
Query: 465 ENCS---YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
C Y + V +++ F E+M PD V +++ + ++
Sbjct: 539 FGCMINLYSRNQRYVNVIEVF-------------EKMRTAGYFPDSNVIAMVLNAYGKQR 585
Query: 522 NVNKAYEMYKEMVHYG-FFPH--MFSVLSLIHALYYDRKNSEMGWVIRNTLRS-CNLNDS 577
KA +Y+EM G FP F +LS LY +K+ EM + L S N+N
Sbjct: 586 EFEKADTVYREMQEEGCVFPDEVHFQMLS----LYSSKKDFEMVESLFQRLESDPNVNSK 641
Query: 578 ELHQVLNEIEVKKCKIDALLNALAKIAVDGML 609
ELH V+ + + K++ + ++ G+L
Sbjct: 642 ELHLVVAALYERADKLNDASRVMNRMRERGIL 673
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/442 (21%), Positives = 174/442 (39%), Gaps = 53/442 (11%)
Query: 159 KFITAYLSSER-VEQALGIFSAMAERG-LSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
+F+ + LS E +++L + + E +P + +YN V+ + + + A + E
Sbjct: 123 RFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMR 182
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
++ + PD TYS LI + +G A +M + VS Y+ L+ + ++S
Sbjct: 183 QRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYS 242
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A + ++ G PD LV +N++I+ + EA +++ M E G+ P+
Sbjct: 243 KAISIFSRLKRSGITPD--------LVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 294
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT-------YESL----------- 378
VSY+T+L + + + +A + EM E LD T Y L
Sbjct: 295 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 354
Query: 379 ----MEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
M+ + V+Y+++L Y + L R M R + VT I K
Sbjct: 355 SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 414
Query: 435 TTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIA 494
A ++ M S P+ I Y T+I + G ++ AA
Sbjct: 415 EHEKATNLVQEMQSRGI--EPNAITYSTII---------------SIWGKAGKLDRAATL 457
Query: 495 HERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYY 554
+++ + V+ D +Y +I + R G + A K ++H P + I L
Sbjct: 458 FQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA----KRLLHELKLPDNIPRETAITILAK 513
Query: 555 DRKNSEMGWVIRNTLRSCNLND 576
+ E WV R S + D
Sbjct: 514 AGRTEEATWVFRQAFESGEVKD 535
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 17/270 (6%)
Query: 35 KKVGETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNAL 91
K+ F LR +EP +VS+ +++ E E EA + R M RK + + TYN +
Sbjct: 347 KEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTM 406
Query: 92 ICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-----LDKAYKVFNEMI 146
I K A L +M+ RG+ PN TY ++I + W LD+A +F ++
Sbjct: 407 IKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISI----WGKAGKLDRAATLFQKLR 462
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE 206
+SG Y I AY ERV +G + PD + I+ + G E
Sbjct: 463 SSGVEIDQVLYQTMIVAY---ERV-GLMGHAKRLLHELKLPDNIPRETAITILAKAGRTE 518
Query: 207 KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLM 266
+A + + E G + D + +I ++F +M P ++ ++
Sbjct: 519 EATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVL 578
Query: 267 YAYCLVGEFSMAFHLHDEMRHRG-FLPDFV 295
AY EF A ++ EM+ G PD V
Sbjct: 579 NAYGKQREFEKADTVYREMQEEGCVFPDEV 608
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 122/300 (40%), Gaps = 48/300 (16%)
Query: 38 GETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNAL 91
GE L R+ E +V++ +IK + E+A +V+EM +G+ P+ TY+ +
Sbjct: 382 GEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTI 441
Query: 92 ICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI-------------DLLCTWWL--- 135
I K + A L+ ++R G+ ++ Y ++I LL L
Sbjct: 442 ISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDN 501
Query: 136 ----------------DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSA 179
++A VF + SG + ++ + I Y ++R + +F
Sbjct: 502 IPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEK 561
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG-ILPDDVTYSALIQALCLQG 238
M G PD V++ + + E EKA + E E+G + PD+V + Q L L
Sbjct: 562 MRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF----QMLSLYS 617
Query: 239 SLP--EAFDLFLEMLRGDVSPSNSTYTRLMYA--YCLVGEFSMAFHLHDEMRHRGFLPDF 294
S E + + L D + NS L+ A Y + + A + + MR RG L F
Sbjct: 618 SKKDFEMVESLFQRLESDPN-VNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPF 676
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/505 (23%), Positives = 223/505 (44%), Gaps = 106/505 (20%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + + +I ELC+ ++ EA+++ + + D T+ +I G K+ +M A EL
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREAREL 99
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
+D++ R +V T+ ++ YL S
Sbjct: 100 FDRVDSR-------------------------------------KNVVTWTAMVSGYLRS 122
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
+++ A +F M ER ++VS+N +I + Q G ++KALE+ E E+ I V++
Sbjct: 123 KQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSW 174
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+++++AL +G + EA +LF M R DV ++T ++ G+ A L D M
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPE 230
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
R +++++NA+I G R+DEA + + MPE D S+NT++ GF
Sbjct: 231 R------------NIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGF 274
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKL 407
+ RE+ KA L M EK + +++++++ Y ++ +
Sbjct: 275 IRNREMNKACGLFDRMPEKNV-----------------ISWTTMITGYVENKENEEALNV 317
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKAT-TSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
+M R+G + +V G +++ L+ + + +G + + S+ + + I+ L+
Sbjct: 318 FSKMLRDGSVKPNV--GTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN- 374
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
Y + + K F GLV + D +N +I + G+ +A
Sbjct: 375 -MYSKSGELIAARKMFDN-GLV--------------CQRDLISWNSMIAVYAHHGHGKEA 418
Query: 527 YEMYKEMVHYGFFPHMFSVLSLIHA 551
EMY +M +GF P + L+L+ A
Sbjct: 419 IEMYNQMRKHGFKPSAVTYLNLLFA 443
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 169/397 (42%), Gaps = 73/397 (18%)
Query: 12 RHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEP--YLVSFKGVIKELCEKERMEEA 69
R +V M+ G A K KV E L P ++S+ +I + R++EA
Sbjct: 200 RDVVSWTAMVDGLA-------KNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEA 252
Query: 70 KEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL 129
++ + M + A ++N +I G + R M A L+D+M E+ +S +
Sbjct: 253 DQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRM-------PEKNVISWTTM 301
Query: 130 LCTWWLDK----AYKVFNEMIASGFL-PSVATYNKFITA--------------YLSSERV 170
+ + +K A VF++M+ G + P+V TY ++A L S+ V
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 171 EQALGIFSA-----------------MAERGL--SPDLVSYNAVISKFCQDGELEKALEI 211
Q I ++ M + GL DL+S+N++I+ + G ++A+E+
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEM 421
Query: 212 KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
+ + G P VTY L+ A G + + + F +++R + P R + CL
Sbjct: 422 YNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP-----LREEHYTCL 476
Query: 272 VGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV-TFNALIHGLCSLE-RVDEALGILRGMP 329
V A L D + +F+ L +F I C++ V A +++ +
Sbjct: 477 VDLCGRAGRLKD-------VTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVL 529
Query: 330 EMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
E G S DA +Y + + + ++A E++++M EK
Sbjct: 530 ETG-SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEK 565
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 183/458 (39%), Gaps = 82/458 (17%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
+V + K + + R +A +F +AE G P L+SY +++ + I
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
+E + G D + ++A+I A G++ +A L+M ++P+ STY L+ Y +
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
G+ + L D M G + P++ TFN L+ C ++V+EA +++ M E G
Sbjct: 164 GKPERSSELLDLMLEEGN-----VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Query: 333 LSPDAVSYNT-------------------------------------VLFGFCQIRELKK 355
+ PD V+YNT V+ G+C+ ++
Sbjct: 219 VRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRD 278
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGL----------------------SDEVTYSSLLN 393
M E + + + SL+ G +D +TYS+++N
Sbjct: 279 GLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMN 338
Query: 394 DYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
+ + G M+K ++ +EM + G PD+ + G + A+ +L +I +
Sbjct: 339 AWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE---S 395
Query: 454 MPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLL 513
P+ +I+ T+I + + G +++A +M V P+ + L
Sbjct: 396 RPNVVIFTTVISG---------------WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 440
Query: 514 IFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
++ + KA E+ + M G P + L L A
Sbjct: 441 MWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 478
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 180/414 (43%), Gaps = 80/414 (19%)
Query: 17 MNVMI-RGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVRE 75
MNV+I RG E+ + V +T P L+S+ ++ + +++ +V E
Sbjct: 52 MNVLIERGRPHEA------QTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSE 105
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWW 134
+ + G D +NA+I + NM AV+ +M+ GL+P TY +LI
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 135 LDKAYKVFNEMIASGFL---PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+++ ++ + M+ G + P++ T+N + A+ ++VE+A + M E G+ PD V+
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGIL-----PDDVTYSALIQALCLQGSLPEAFDL 246
YN + + + Q GE +A ++E VEK ++ P+ T ++ C +G + +
Sbjct: 226 YNTIATCYVQKGETVRA---ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 247 ----------------------FLEMLRGD-------------VSPSNSTYTRLMYAYCL 271
F+E++ D V TY+ +M A+
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSS 342
Query: 272 VGEFSMAFHLHDEMRHRGFLPD--------------------------FVIQFSPSLVTF 305
G A + EM G PD +++ P++V F
Sbjct: 343 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIF 402
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
+I G CS +D+A+ + M + G+SP+ ++ T+++G+ ++++ KA E+
Sbjct: 403 TTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 456
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 155/332 (46%), Gaps = 22/332 (6%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRME------PYLVSFKGVIKELCEKERMEEAKE 71
N +I+G+ ++ K ++ E L+ E P + +F +++ C+K+++EEA E
Sbjct: 154 NTLIKGYG----IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWE 209
Query: 72 VVREMNRKGLAPDCETYNAL-ICGMCKVRNMLCAVELYDQMRVR-GLSPNERTYMSLIDL 129
VV++M G+ PD TYN + C + K + E+ ++M ++ PN RT ++
Sbjct: 210 VVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGG 269
Query: 130 LC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
C + + M ++ +N I ++ + + + M E + D
Sbjct: 270 YCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKAD 329
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
+++Y+ V++ + G +EKA ++ E V+ G+ PD YS L + ++ P+ + L
Sbjct: 330 VITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY-VRAKEPKKAEELL 388
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNAL 308
E L + P+ +T ++ +C G A + ++M G SP++ TF L
Sbjct: 389 ETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG--------VSPNIKTFETL 440
Query: 309 IHGLCSLERVDEALGILRGMPEMGLSPDAVSY 340
+ G +++ +A +L+ M G+ P+ ++
Sbjct: 441 MWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 170/394 (43%), Gaps = 33/394 (8%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
ME+ +V M R G+ P+ T+N L C N + ++M G P+ TY +
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 126 LIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
L+ C L +A+ ++ M +P + TY I RV +A F M +RG
Sbjct: 277 LVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRG 336
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
+ PD +SYN +I +C++G ++++ ++ E + ++PD T +++ +G L A
Sbjct: 337 IKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAV 396
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE-MRHRGFLPDFVIQFSPSLV 303
+ +E+ R V L+ + C G+ A HL D + G + P
Sbjct: 397 NFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGH------EAKPE-- 448
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
T+N LI L + ++EAL + + DA +Y ++ C+I ++A L EM
Sbjct: 449 TYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Query: 364 DEKIIWLDEYTYESLMEGLSDEV----------------------TYSSLLNDYFAQG-N 400
+ + D + +L+ G E+ +Y+SL+ G
Sbjct: 509 FDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCG 568
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
+K +L+ M R G++P+ +T I L + +
Sbjct: 569 YKKALELQERMQRLGFVPNRLTCKYLIQVLEQPS 602
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/489 (23%), Positives = 200/489 (40%), Gaps = 57/489 (11%)
Query: 95 MCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWL-----DKAYKVFNEMIAS 148
+C++ + E D RV + +E + ++ D+L +L ++ ++VF E++ S
Sbjct: 136 LCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDS 195
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
GF SV T N + L + +E ++S M G+ P+ ++N + + FC D +
Sbjct: 196 GFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREV 255
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
+ + E+G PD VTY+ L+ + C +G L EAF L+ M R V P TYT L+
Sbjct: 256 DDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKG 315
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
C G A M RG PD +++N LI+ C + ++ +L M
Sbjct: 316 LCKDGRVREAHQTFHRMVDRGIKPD--------CMSYNTLIYAYCKEGMMQQSKKLLHEM 367
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM------------DEKIIWL----DE 372
+ PD + ++ GF + L A VE+ D I+ L
Sbjct: 368 LGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKP 427
Query: 373 YTYESLMEGLSDE-------VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGV 425
+ + L++ + +E TY++L+ +++ L+ ++ + D+ T
Sbjct: 428 FAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRA 487
Query: 426 FINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFST 484
I L + A+ ++ M S+ P I L+ C ++F A L+ F+
Sbjct: 488 LIGCLCRIGRNREAESLMAEMFDSE--VKPDSFICGALVYGYCKELDFDKAERLLSLFAM 545
Query: 485 RGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG-NVNKAYEMYKEMVHYGFFPHMF 543
+ D YN L+ C G KA E+ + M GF P+
Sbjct: 546 EFRIF----------------DPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRL 589
Query: 544 SVLSLIHAL 552
+ LI L
Sbjct: 590 TCKYLIQVL 598
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 142/333 (42%), Gaps = 50/333 (15%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP LV++ ++ C + R++EA + + M R+ + PD TY +LI G+CK + A +
Sbjct: 268 EPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQ 327
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+ +M RG+ P+ +Y +LI C + ++ K+ +EM+ + +P T + ++
Sbjct: 328 TFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFV 387
Query: 166 SSERVEQALGI-----------------------------FSA-------MAERGLSPDL 189
R+ A+ F+A + E G
Sbjct: 388 REGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKP 447
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
+YN +I + +E+AL +K + + + D TY ALI LC G EA L E
Sbjct: 448 ETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAE 507
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD--EMRHRGFLPDFVIQFSPSLVTFNA 307
M +V P + L+Y YC +F A L M R F P+ ++N+
Sbjct: 508 MFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPE----------SYNS 557
Query: 308 LIHGLCSLE-RVDEALGILRGMPEMGLSPDAVS 339
L+ +C +AL + M +G P+ ++
Sbjct: 558 LVKAVCETGCGYKKALELQERMQRLGFVPNRLT 590
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 113/274 (41%), Gaps = 15/274 (5%)
Query: 32 CKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK+ +V E ++P +S+ +I C++ M+++K+++ EM + PD
Sbjct: 317 CKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDR 376
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEM 145
T ++ G + +L AV ++R + LI LC A K +
Sbjct: 377 FTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDR 436
Query: 146 I--ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
I G TYN I + + +E+AL + + + D +Y A+I C+ G
Sbjct: 437 IIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIG 496
Query: 204 ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA---FDLFLEMLRGDVSPSNS 260
+A + AE + + PD AL+ C + +A LF R P
Sbjct: 497 RNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRI-FDP--E 553
Query: 261 TYTRLMYAYCLVG-EFSMAFHLHDEMRHRGFLPD 293
+Y L+ A C G + A L + M+ GF+P+
Sbjct: 554 SYNSLVKAVCETGCGYKKALELQERMQRLGFVPN 587
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 9/271 (3%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLD 136
++ P+ TY L+ G C+VRN++ A +++ M +GL P+ + +++ LL +
Sbjct: 291 KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKS 350
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A K+F+ M + G P+V +Y I + +E A+ F M + GL PD Y +I
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLI 410
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ F +L+ E+ E EKG PD TY+ALI+ + Q A ++ +M++ ++
Sbjct: 411 TGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 470
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
PS T+ +M +Y + + M + +EM +G PD ++ LI GL
Sbjct: 471 PSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPD--------DNSYTVLIRGLIGEG 522
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
+ EA L M + G+ + YN F
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYNKFAADF 553
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 155/355 (43%), Gaps = 26/355 (7%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK 137
R+G A D TYN+++ + K R V + ++M +GL E +++ K
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKK 247
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A +F M F V T N + + ++ ++A +F + ER +P++++Y +++
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLN 306
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
+C+ L +A I + +++G+ PD V ++ +++ L +A LF M P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
+ +YT ++ +C A D+M G PD + + LI G + ++
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV--------YTCLITGFGTQKK 418
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
+D +L+ M E G PD +YN + +K+ ++K+ Y
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNAL---------------IKLMANQKMPEHATRIYNK 463
Query: 378 LMEGLSDEV--TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL 430
+++ + T++ ++ YF N + + EM + G PD + V I GL
Sbjct: 464 MIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGL 518
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 166/417 (39%), Gaps = 55/417 (13%)
Query: 173 ALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
A F AER G + D +YN+++S + + E + + E KG+L + T++ +
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAM 236
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
+A +A +F M + T L+ + A L D+++ R
Sbjct: 237 KAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--- 293
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
F+P+++T+ L++G C + + EA I M + GL PD V++N +L G + R
Sbjct: 294 ------FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSR 347
Query: 352 ELKKAYELKVEMDEK---------IIWLDEYTYESLME------------GLS-DEVTYS 389
+ A +L M K I + ++ +S ME GL D Y+
Sbjct: 348 KKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYT 407
Query: 390 SLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISS 449
L+ + Q + V++L +EM G+ PD T I + + A I +MI +
Sbjct: 408 CLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN 467
Query: 450 QC--------LTMPSYI----------IYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEA 491
+ + M SY +++ +I+ + S L++ G EA
Sbjct: 468 EIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
Query: 492 AIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSL 548
E M + +K YN D R G E+++E+ F F+ +
Sbjct: 528 CRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRAKFSGKFAAAEI 580
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 13/320 (4%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLA-PDCETYNALI-CGMCKVRNM 101
L ++P F ++K C+ + A VV EM R G++ P+ TY+ L+ C R+
Sbjct: 190 LGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSK 249
Query: 102 LCAVELYDQMRVR-GLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNK 159
AVEL++ M + G+SP+ T+ +I+ C +++A K+ + M +G P+V Y+
Sbjct: 250 E-AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSA 308
Query: 160 FITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
+ + ++++A F + + GL D V Y +++ FC++GE ++A+++ E
Sbjct: 309 LMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASR 368
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
D +TY+ +++ L +G EA + + V + +Y ++ A C GE A
Sbjct: 369 CRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAV 428
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
M RG P T+N L+ LC + + +L G +GL P S
Sbjct: 429 KFLSVMSERGIWPHH--------ATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKS 480
Query: 340 YNTVLFGFCQIRELKKAYEL 359
+ V+ C+ R+L +EL
Sbjct: 481 WGAVVESICKERKLVHVFEL 500
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 167/394 (42%), Gaps = 35/394 (8%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-D 136
+KG + TY+ L+ + + + L + QM+ E +++L+ L D
Sbjct: 82 QKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHD 141
Query: 137 KAYKVFNEM-IASGFLPSVATYNKFITAYLSSERVEQALG-IFSAMAERGLSPDLVSYNA 194
K ++FN + + + PS+ + + + S V + + A GL P+ +N
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNI 201
Query: 195 VISKFCQDGELEKALEIKAETVEKGI-LPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
++ C++G++ A + E GI P+ +TYS L+ L EA +LF +M+
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK 261
Query: 254 D-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
+ +SP T+ ++ +C GE A + D M+ G +P++ ++AL++G
Sbjct: 262 EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNG--------CNPNVYNYSALMNGF 313
Query: 313 CSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDE 372
C + ++ EA + + GL D V Y T++ FC+ E +A +L EM D
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Query: 373 YTYESLMEGLSDE----------------------VTYSSLLNDYFAQGNMQKVFKLERE 410
TY ++ GLS E +Y +LN G ++K K
Sbjct: 374 LTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSV 433
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILL 444
M+ G P T + L + T I +L+
Sbjct: 434 MSERGIWPHHATWNELVVRLCESGYTEIGVRVLI 467
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 115/241 (47%), Gaps = 1/241 (0%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P V+F +I C +E AK+++ M + G P+ Y+AL+ G CKV + A
Sbjct: 264 ISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+ +D+++ GL + Y +L++ C D+A K+ EM AS TYN +
Sbjct: 324 QTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGL 383
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S R E+AL + G+ + SY +++ C +GELEKA++ + E+GI P
Sbjct: 384 SSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHH 443
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
T++ L+ LC G + + LR + P ++ ++ + C + F L D
Sbjct: 444 ATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDS 503
Query: 285 M 285
+
Sbjct: 504 L 504
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 199/485 (41%), Gaps = 79/485 (16%)
Query: 104 AVELYDQMRVRGL-SPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFI 161
A+E+++ + +R SPN R +++ +L W + A ++F + V YN +
Sbjct: 174 ALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPT-VGDRVQVYNAMM 232
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEK--ALEIKAETVEKG 219
Y S + +A + AM +RG PDL+S+N +I+ + G L A+E+ G
Sbjct: 233 GVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSG 292
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
+ PD +TY+ L+ A +L A +F +M P TY ++ Y G + A
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
L E+ +GF PD VT+N+L++ ++ + + M +MG D ++
Sbjct: 353 RLFMELELKGFFPD--------AVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 340 YNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQG 399
YNT++ + + +L A +L + M+GLS
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKD----------------MKGLS---------------- 432
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
G PD++T V I+ L K T A ++ M+ P+
Sbjct: 433 ---------------GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG--IKPTLQT 475
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
Y LI C Y + G EA M KPD Y++++ D
Sbjct: 476 YSALI--CGYAK-------------AGKREEAEDTFSCMLRSGTKPDNLAYSVML-DVLL 519
Query: 520 RGN-VNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSE 578
RGN KA+ +Y++M+ G P +I L + ++ ++ IR+ C +N E
Sbjct: 520 RGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLE 579
Query: 579 LHQVL 583
+ VL
Sbjct: 580 ISSVL 584
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/543 (21%), Positives = 228/543 (41%), Gaps = 62/543 (11%)
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL-LCTWWL--DKAYKVF 142
+ YNA++ + A EL D MR RG P+ ++ +LI+ L + L + A ++
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 143 NEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQD 202
+ + SG P TYN ++A ++ A+ +F M PDL +YNA+IS + +
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 203 GELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTY 262
G +A + E KG PD VTY++L+ A + + + +++ +M + TY
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 263 TRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEAL 322
+++ Y G+ +A L+ +M+ + +P +T+ LI L R EA
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKG-------LSGRNPDAITYTVLIDSLGKANRTVEAA 458
Query: 323 GILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL 382
++ M ++G+ P +Y+ ++ G+ + + ++A E T+ ++
Sbjct: 459 ALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA---------------EDTFSCMLRSG 503
Query: 383 S--DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAK 440
+ D + YS +L+ +K + L R+M +G+ P + I GL K+ + +
Sbjct: 504 TKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQ 563
Query: 441 GILLRM---------------ISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTR 485
+ M + +C + + + I N +E + + ++ +S+
Sbjct: 564 KTIRDMEELCGMNPLEISSVLVKGECFDLAARQL-KVAITNGYELENDTLLSILGSYSSS 622
Query: 486 GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMY--KEMVHYGFFPHMF 543
G +EA E + + + LI HC+ N++ A + Y VH F
Sbjct: 623 GRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSST 682
Query: 544 SVLSLIHALYYDRKNSEMGWVIRN-TLRSCNLNDS----------------ELHQVLNEI 586
+L+H + +E V + L C ++S HQV+N+
Sbjct: 683 MYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQA 742
Query: 587 EVK 589
E K
Sbjct: 743 ETK 745
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 137/304 (45%), Gaps = 12/304 (3%)
Query: 48 PYLVSFKGVIKELCEKERMEE--AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
P L+SF +I + + A E++ + GL PD TYN L+ + N+ AV
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAY 164
++++ M P+ TY ++I + L +A ++F E+ GF P TYN + A+
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI-KAETVEKGILPD 223
E+ ++ M + G D ++YN +I + + G+L+ AL++ K G PD
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+TY+ LI +L EA L EML + P+ TY+ L+ Y G+ A
Sbjct: 438 AITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
M G PD + +S V + L+ G +A G+ R M G +P Y +
Sbjct: 498 CMLRSGTKPDN-LAYS---VMLDVLLRG----NETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 344 LFGF 347
+ G
Sbjct: 550 ILGL 553
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 148/332 (44%), Gaps = 33/332 (9%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALI-----CGMCKVRN 100
+ P +++ ++ ++ A +V +M PD TYNA+I CG+
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAE-- 350
Query: 101 MLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNK 159
A L+ ++ ++G P+ TY SL+ +K +V+ +M GF TYN
Sbjct: 351 ---AERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 160 FITAYLSSERVEQALGIFSAMAERGLS---PDLVSYNAVISKFCQDGELEKALEIKAETV 216
I Y +++ AL ++ M +GLS PD ++Y +I + +A + +E +
Sbjct: 408 IIHMYGKQGQLDLALQLYKDM--KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
+ GI P TYSALI G EA D F MLR P N Y+ ++ E
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM-GLSP 335
A+ L+ +M G P + + + +I GL R D+ +R M E+ G++P
Sbjct: 526 KAWGLYRDMISDGHTPSYTL--------YELMILGLMKENRSDDIQKTIRDMEELCGMNP 577
Query: 336 DAVSYNTVLFGFC---QIRELKKA----YELK 360
+S + ++ G C R+LK A YEL+
Sbjct: 578 LEIS-SVLVKGECFDLAARQLKVAITNGYELE 608
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 2/229 (0%)
Query: 36 KVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGM 95
KV E R +P L ++ +I EA+ + E+ KG PD TYN+L+
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Query: 96 CKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIA-SGFLPS 153
+ RN E+Y QM+ G +E TY ++I + LD A +++ +M SG P
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437
Query: 154 VATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKA 213
TY I + + R +A + S M + G+ P L +Y+A+I + + G+ E+A + +
Sbjct: 438 AITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFS 497
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTY 262
+ G PD++ YS ++ L +A+ L+ +M+ +PS + Y
Sbjct: 498 CMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLY 546
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 171/419 (40%), Gaps = 53/419 (12%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGF-LPSVATYNKFI 161
A +++ +R+ G +E S++ + C + + A++V N+ GF Y I
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDII 759
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
AY + ++A + + + G +PDL ++N+++S + Q G E+A I + G
Sbjct: 760 EAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPS 819
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
P + + L+ ALC+ G L E + + E+ S S+ ++ A+ G +
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 282 HDEMRHRGFLPDFVI---------------------------QFSPSLVTFNALIHGLCS 314
+ M+ G+LP + F L +N+++ +
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM----------- 363
+E + + + + + E GL PD +YNT++ +C+ R ++ Y L +M
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 364 ---------DEKIIWLDEYTYESLM-EGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
+K + E +E L+ +GL D Y +++ G+ K KL + M
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGIL--LRMISSQCLTMPSYIIYDTLIENCSY 469
G P T+ + + + A+ +L L+ + T+P + D + + Y
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDY 1118
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 132/296 (44%), Gaps = 10/296 (3%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + ++ +I+ LC+ +R+ +A+ +V EM + +N+++ + + V++
Sbjct: 890 PTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
Y +++ GL P+E TY +LI + C ++ Y + +M G P + TY I+A+
Sbjct: 950 YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGK 1009
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+ +EQA +F + +GL D Y+ ++ G KA ++ GI P T
Sbjct: 1010 QKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLAT 1069
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
L+ + G+ EA + + +V + Y+ ++ AY +++ EM+
Sbjct: 1070 MHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMK 1129
Query: 287 HRGFLPDFVI--------QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS 334
G PD I FS + L+ L + D + +L G PE+ +S
Sbjct: 1130 KEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIG-FDLPIRLLAGRPELLVS 1184
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 160/406 (39%), Gaps = 39/406 (9%)
Query: 35 KKVGETFGLLRME---PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNAL 91
+K G LR P L ++ ++ + E A+ + M R G +P E+ N L
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 92 ICGMC---KVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIA 147
+ +C ++ + VE M G ++ + + ++D + + K+++ M A
Sbjct: 829 LHALCVDGRLEELYVVVEELQDM---GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKA 885
Query: 148 SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEK 207
+G+LP++ Y I +RV A + S M E +L +N+++ + + +K
Sbjct: 886 AGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKK 945
Query: 208 ALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
+++ E G+ PD+ TY+ LI C E + L +M + P TY L+
Sbjct: 946 TVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER----VDEALG 323
A+ A L +E+ +G D + H + + R +A
Sbjct: 1006 AFGKQKCLEQAEQLFEELLSKGLKLD------------RSFYHTMMKISRDSGSDSKAEK 1053
Query: 324 ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS 383
+L+ M G+ P + + ++ + ++A ++ + + + L
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVEL------------- 1100
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
+ YSS+++ Y + + EM + G PD F+
Sbjct: 1101 TTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRA 1146
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/593 (20%), Positives = 226/593 (38%), Gaps = 97/593 (16%)
Query: 42 GLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNM 101
GL P +++ +I L + R EA ++ EM G+ P +TY+ALICG K
Sbjct: 430 GLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKR 489
Query: 102 LCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKF 160
A + + M G P+ Y ++D+L KA+ ++ +MI+ G PS Y
Sbjct: 490 EEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELM 549
Query: 161 ITAYLSSERVEQALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
I + R + M E G++P +S + ++ C D A ++K + G
Sbjct: 550 ILGLMKENRSDDIQKTIRDMEELCGMNPLEIS-SVLVKGECFD---LAARQLKV-AITNG 604
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR-LMYAYCLVGEFSMA 278
++ T +++ + G EAF+L LE L+ S S T L+ +C V S A
Sbjct: 605 YELENDTLLSILGSYSSSGRHSEAFEL-LEFLKEHASGSKRLITEALIVLHCKVNNLSAA 663
Query: 279 FHLHDEMRHRGFLPDFVIQ---FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
DE + D + F S + + L+H + E EA + + G
Sbjct: 664 L---DE-----YFADPCVHGWCFGSSTM-YETLLHCCVANEHYAEASQVFSDLRLSGCEA 714
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW----------LDEYTYESLMEGLSDE 385
+++ +C++ + A+++ + + K ++ Y + L +
Sbjct: 715 SESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESV 774
Query: 386 V-------------TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN- 431
V T++SL++ Y G ++ + M R+G P ++ + ++ L
Sbjct: 775 VGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCV 834
Query: 432 --------------KKATTSIAKGILLRMISSQCLT------------------MPSYII 459
+ I+K +L M+ + +P+ +
Sbjct: 835 DGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRL 894
Query: 460 YDTLIE-NCSYVEFKSAVGLVKDFSTRGLVNEAAI-------------------AHERMH 499
Y +IE C + A +V + E AI ++R+
Sbjct: 895 YRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIK 954
Query: 500 NMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
++PD YN LI +CR + Y + ++M + G P + + SLI A
Sbjct: 955 ETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 10/298 (3%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
++ ++ L ++ +++ EM R G P+ TYN LI + + A+ +++QM
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
+ G P+ TY +LID+ +LD A ++ M A G P TY+ I + +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
A +F M ++G +P+LV+YN ++ + + AL++ + G PD VTYS +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
++ L G L EA +F EM + + P Y L+ + G A+ + M H G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
P+ + T N+L+ + ++ EA +L+ M +GL P +Y T+L C
Sbjct: 606 RPN--------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCC 654
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 9/264 (3%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P V++ +I + EA V +M G PD TY LI K + A++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+Y +M+ GLSP+ TY +I+ L L A+K+F EM+ G P++ TYN + +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ + AL ++ M G PD V+Y+ V+ G LE+A + E +K +PD+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y L+ G++ +A+ + ML + P+ T L+ + V + + A+ L M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 286 RHRGFLPDFVIQFSPSLVTFNALI 309
+ PSL T+ L+
Sbjct: 636 --------LALGLRPSLQTYTLLL 651
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 27/251 (10%)
Query: 140 KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
K+ +EM+ G P+ TYN+ I +Y + + +A+ +F+ M E G PD V+Y +I
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 200 CQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
+ G L+ A+++ G+ PD TYS +I L G LP A LF EM+ +P+
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI----------------------- 296
TY +M + + A L+ +M++ GF PD V
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 297 ----QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
+ P + L+ V++A + M GL P+ + N++L F ++ +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 353 LKKAYELKVEM 363
+ +AYEL M
Sbjct: 625 IAEAYELLQNM 635
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 38/347 (10%)
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
+ G D TY+ ++ L L EM+R P+ TY RL+++Y +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A ++ ++M+ G PD VT+ LI +D A+ + + M GLSPD
Sbjct: 417 EAMNVFNQMQEAGCKPD--------RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
+Y+ ++ + L A++L EM +D+ +L VTY+ +++ +
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEM------VDQGCTPNL-------VTYNIMMDLHA 515
Query: 397 AQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPS 456
N Q KL R+M G+ PD VT + + L A+ + M Q +P
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM--QQKNWIPD 573
Query: 457 YIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFD 516
+Y L++ + G V +A ++ M + ++P+ N L+
Sbjct: 574 EPVYGLLVD---------------LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 517 HCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGW 563
R + +AYE+ + M+ G P + + L+ R +MG+
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 129/314 (41%), Gaps = 48/314 (15%)
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
TYT ++ +F L DEM G P+ VT+N LIH ++E
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGC--------QPNTVTYNRLIHSYGRANYLNE 417
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
A+ + M E G PD V+Y T+ I KA L + MD Y+ +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTL------IDIHAKAGFLDIAMD---------MYQRMQA 462
Query: 381 G--LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
G D TYS ++N G++ KL EM G P+ VT + ++ L+ KA
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNYQ 521
Query: 439 AKGILLRMISSQCLTMPSYIIYDTLIE---NCSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
L R + + P + Y ++E +C Y+E EA
Sbjct: 522 NALKLYRDMQNAGFE-PDKVTYSIVMEVLGHCGYLE------------------EAEAVF 562
Query: 496 ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
M + PD VY LL+ + GNV KA++ Y+ M+H G P++ + SL+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 556 RKNSEMGWVIRNTL 569
K +E +++N L
Sbjct: 623 NKIAEAYELLQNML 636
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P ++ +I L + + A ++ EM +G P+ TYN ++ K RN A+
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+LY M+ G P++ TY ++++L C +L++A VF EM ++P Y +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCG-YLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + VE+A + AM GL P++ + N+++S F + ++ +A E+ + G+ P
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Query: 224 DVTYSALIQALCLQG 238
TY+ L+ + C G
Sbjct: 644 LQTYTLLL-SCCTDG 657
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 136/337 (40%), Gaps = 39/337 (11%)
Query: 161 ITAYLSSERVEQ------ALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALEIKA 213
I AY +++ ++Q ALG F + + G D +Y ++ + + ++
Sbjct: 329 IDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLD 388
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
E V G P+ VTY+ LI + L EA ++F +M P TY L+ + G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
+A ++ M+ G PD T++ +I+ L + A + M + G
Sbjct: 449 FLDIAMDMYQRMQAGGLSPD--------TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS---------- 383
+P+ V+YN ++ + R + A +L +M D+ TY +ME L
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 384 ------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
DE Y L++ + GN++K ++ + M G P+ T ++
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCS 468
+ + A +L M++ PS Y L+ C+
Sbjct: 621 RVNKIAEAYELLQNMLA--LGLRPSLQTYTLLLSCCT 655
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 10/298 (3%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
++ ++ L ++ +++ EM R G P+ TYN LI + + A+ +++QM
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
+ G P+ TY +LID+ +LD A ++ M A G P TY+ I + +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
A +F M ++G +P+LV+YN ++ + + AL++ + G PD VTYS +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
++ L G L EA +F EM + + P Y L+ + G A+ + M H G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
P+ + T N+L+ + ++ EA +L+ M +GL P +Y T+L C
Sbjct: 606 RPN--------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCC 654
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 9/264 (3%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P V++ +I + EA V +M G PD TY LI K + A++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+Y +M+ GLSP+ TY +I+ L L A+K+F EM+ G P++ TYN + +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ + AL ++ M G PD V+Y+ V+ G LE+A + E +K +PD+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y L+ G++ +A+ + ML + P+ T L+ + V + + A+ L M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 286 RHRGFLPDFVIQFSPSLVTFNALI 309
+ PSL T+ L+
Sbjct: 636 --------LALGLRPSLQTYTLLL 651
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 27/251 (10%)
Query: 140 KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
K+ +EM+ G P+ TYN+ I +Y + + +A+ +F+ M E G PD V+Y +I
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 200 CQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
+ G L+ A+++ G+ PD TYS +I L G LP A LF EM+ +P+
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI----------------------- 296
TY +M + + A L+ +M++ GF PD V
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 297 ----QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
+ P + L+ V++A + M GL P+ + N++L F ++ +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 353 LKKAYELKVEM 363
+ +AYEL M
Sbjct: 625 IAEAYELLQNM 635
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 38/347 (10%)
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
+ G D TY+ ++ L L EM+R P+ TY RL+++Y +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A ++ ++M+ G PD VT+ LI +D A+ + + M GLSPD
Sbjct: 417 EAMNVFNQMQEAGCKPD--------RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
+Y+ ++ + L A++L EM +D+ +L VTY+ +++ +
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEM------VDQGCTPNL-------VTYNIMMDLHA 515
Query: 397 AQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPS 456
N Q KL R+M G+ PD VT + + L A+ + M Q +P
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM--QQKNWIPD 573
Query: 457 YIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFD 516
+Y L++ + G V +A ++ M + ++P+ N L+
Sbjct: 574 EPVYGLLVD---------------LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 517 HCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGW 563
R + +AYE+ + M+ G P + + L+ R +MG+
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 129/314 (41%), Gaps = 48/314 (15%)
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
TYT ++ +F L DEM G P+ VT+N LIH ++E
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGC--------QPNTVTYNRLIHSYGRANYLNE 417
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
A+ + M E G PD V+Y T+ I KA L + MD Y+ +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTL------IDIHAKAGFLDIAMD---------MYQRMQA 462
Query: 381 G--LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
G D TYS ++N G++ KL EM G P+ VT + ++ L+ KA
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNYQ 521
Query: 439 AKGILLRMISSQCLTMPSYIIYDTLIE---NCSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
L R + + P + Y ++E +C Y+E EA
Sbjct: 522 NALKLYRDMQNAGFE-PDKVTYSIVMEVLGHCGYLE------------------EAEAVF 562
Query: 496 ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
M + PD VY LL+ + GNV KA++ Y+ M+H G P++ + SL+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 556 RKNSEMGWVIRNTL 569
K +E +++N L
Sbjct: 623 NKIAEAYELLQNML 636
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P ++ +I L + + A ++ EM +G P+ TYN ++ K RN A+
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+LY M+ G P++ TY ++++L C +L++A VF EM ++P Y +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCG-YLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + VE+A + AM GL P++ + N+++S F + ++ +A E+ + G+ P
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Query: 224 DVTYSALIQALCLQG 238
TY+ L+ + C G
Sbjct: 644 LQTYTLLL-SCCTDG 657
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 136/337 (40%), Gaps = 39/337 (11%)
Query: 161 ITAYLSSERVEQ------ALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALEIKA 213
I AY +++ ++Q ALG F + + G D +Y ++ + + ++
Sbjct: 329 IDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLD 388
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
E V G P+ VTY+ LI + L EA ++F +M P TY L+ + G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
+A ++ M+ G PD T++ +I+ L + A + M + G
Sbjct: 449 FLDIAMDMYQRMQAGGLSPD--------TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS---------- 383
+P+ V+YN ++ + R + A +L +M D+ TY +ME L
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 384 ------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
DE Y L++ + GN++K ++ + M G P+ T ++
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCS 468
+ + A +L M++ PS Y L+ C+
Sbjct: 621 RVNKIAEAYELLQNMLA--LGLRPSLQTYTLLLSCCT 655
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 141/298 (47%), Gaps = 10/298 (3%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
++ ++ L ++ +++ EM R G P+ TYN LI + + A+ +++QM
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
+ G P+ TY +LID+ +LD A ++ M A G P TY+ I + +
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
A +F M ++G +P+LV+YN ++ + + AL++ + G PD VTYS +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
++ L G L EA +F EM + + P Y L+ + G A+ + M H G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
P+ + T N+L+ + ++ EA +L+ M +GL P +Y T+L C
Sbjct: 606 RPN--------VPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY-TLLLSCC 654
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 9/264 (3%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P V++ +I + EA V +M G PD TY LI K + A++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+Y +M+ GLSP+ TY +I+ L L A+K+F EM+ G P++ TYN + +
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ + AL ++ M G PD V+Y+ V+ G LE+A + E +K +PD+
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEP 575
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y L+ G++ +A+ + ML + P+ T L+ + V + + A+ L M
Sbjct: 576 VYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Query: 286 RHRGFLPDFVIQFSPSLVTFNALI 309
+ PSL T+ L+
Sbjct: 636 --------LALGLRPSLQTYTLLL 651
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 113/251 (45%), Gaps = 27/251 (10%)
Query: 140 KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
K+ +EM+ G P+ TYN+ I +Y + + +A+ +F+ M E G PD V+Y +I
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 200 CQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
+ G L+ A+++ G+ PD TYS +I L G LP A LF EM+ +P+
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNL 504
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI----------------------- 296
TY +M + + A L+ +M++ GF PD V
Sbjct: 505 VTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTE 564
Query: 297 ----QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
+ P + L+ V++A + M GL P+ + N++L F ++ +
Sbjct: 565 MQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 353 LKKAYELKVEM 363
+ +AYEL M
Sbjct: 625 IAEAYELLQNM 635
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 143/347 (41%), Gaps = 38/347 (10%)
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
+ G D TY+ ++ L L EM+R P+ TY RL+++Y +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A ++ ++M+ G PD VT+ LI +D A+ + + M GLSPD
Sbjct: 417 EAMNVFNQMQEAGCKPD--------RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPD 468
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
+Y+ ++ + L A++L EM +D+ +L VTY+ +++ +
Sbjct: 469 TFTYSVIINCLGKAGHLPAAHKLFCEM------VDQGCTPNL-------VTYNIMMDLHA 515
Query: 397 AQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPS 456
N Q KL R+M G+ PD VT + + L A+ + M Q +P
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM--QQKNWIPD 573
Query: 457 YIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFD 516
+Y L++ + G V +A ++ M + ++P+ N L+
Sbjct: 574 EPVYGLLVD---------------LWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 517 HCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGW 563
R + +AYE+ + M+ G P + + L+ R +MG+
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGF 665
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 129/314 (41%), Gaps = 48/314 (15%)
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
TYT ++ +F L DEM G P+ VT+N LIH ++E
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGC--------QPNTVTYNRLIHSYGRANYLNE 417
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
A+ + M E G PD V+Y T+ I KA L + MD Y+ +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTL------IDIHAKAGFLDIAMD---------MYQRMQA 462
Query: 381 G--LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
G D TYS ++N G++ KL EM G P+ VT + ++ L+ KA
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD-LHAKARNYQ 521
Query: 439 AKGILLRMISSQCLTMPSYIIYDTLIE---NCSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
L R + + P + Y ++E +C Y+E EA
Sbjct: 522 NALKLYRDMQNAGFE-PDKVTYSIVMEVLGHCGYLE------------------EAEAVF 562
Query: 496 ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
M + PD VY LL+ + GNV KA++ Y+ M+H G P++ + SL+
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 556 RKNSEMGWVIRNTL 569
K +E +++N L
Sbjct: 623 NKIAEAYELLQNML 636
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P ++ +I L + + A ++ EM +G P+ TYN ++ K RN A+
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+LY M+ G P++ TY ++++L C +L++A VF EM ++P Y +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCG-YLEEAEAVFTEMQQKNWIPDEPVYGLLVDL 583
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + VE+A + AM GL P++ + N+++S F + ++ +A E+ + G+ P
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPS 643
Query: 224 DVTYSALIQALCLQG 238
TY+ L+ + C G
Sbjct: 644 LQTYTLLL-SCCTDG 657
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 151/377 (40%), Gaps = 44/377 (11%)
Query: 161 ITAYLSSERVEQ------ALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALEIKA 213
I AY +++ ++Q ALG F + + G D +Y ++ + + ++
Sbjct: 329 IDAYQANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLD 388
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
E V G P+ VTY+ LI + L EA ++F +M P TY L+ + G
Sbjct: 389 EMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAG 448
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
+A ++ M+ G PD T++ +I+ L + A + M + G
Sbjct: 449 FLDIAMDMYQRMQAGGLSPD--------TFTYSVIINCLGKAGHLPAAHKLFCEMVDQGC 500
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS---------- 383
+P+ V+YN ++ + R + A +L +M D+ TY +ME L
Sbjct: 501 TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEA 560
Query: 384 ------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
DE Y L++ + GN++K ++ + M G P+ T ++
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEA 491
+ + A +L M++ PS Y L+ C+ K +G F + + +
Sbjct: 621 RVNKIAEAYELLQNMLA--LGLRPSLQTYTLLLSCCTDGRSKLDMG----FCGQLMASTG 674
Query: 492 AIAHERMHNM-SVKPDG 507
AH + M + PDG
Sbjct: 675 HPAHMFLLKMPAAGPDG 691
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/512 (22%), Positives = 209/512 (40%), Gaps = 67/512 (13%)
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLD- 136
+KG D YNA + + + A +L + M +G P+E+ + LI +
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+ Y V+ +M GF P V YN+ + A + + + AL ++ E GL + ++ ++
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
C+ G +E+ LEI E PD Y+A+I+ L +G+L + ++ EM R ++
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR--------------GFLPDFVIQ----- 297
P Y L+ C G + L EM+ + GF+ D ++
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNL 390
Query: 298 --------FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
+ + +NA+I GLCS+ +VD+A + + E L PD + + ++ +
Sbjct: 391 WEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVV 450
Query: 350 IRE-------LKKAYELKVEMDE------KIIWLDEYT--------YESLMEGLSDEVTY 388
+ L++ EL + + K++ DE Y +G Y
Sbjct: 451 MNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVY 510
Query: 389 SSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMIS 448
+ L+ + G++QK L EM + G+ PDS + + I +K A ++I
Sbjct: 511 NILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIE 570
Query: 449 SQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDG 507
C+ PS Y +L + C E + + LV+ E + N+ P
Sbjct: 571 MSCV--PSIAAYLSLTKGLCQIGEIDAVMLLVR---------------ECLGNVESGPME 613
Query: 508 AVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFF 539
Y L + C+ N K ++ EM G F
Sbjct: 614 FKYALTVCHVCKGSNAEKVMKVVDEMNQEGVF 645
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/506 (20%), Positives = 205/506 (40%), Gaps = 57/506 (11%)
Query: 9 KSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEE 68
K F ++RM+ R + K KK G +P + + ++ L + +
Sbjct: 194 KQFEILIRMHADNRRGLRVYYVYEKMKKFG-------FKPRVFLYNRIMDALVKNGYFDL 246
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A V + GL + T+ L+ G+CK + +E+ +MR P+ Y ++I
Sbjct: 247 ALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK 306
Query: 129 LLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
L + LD + +V++EM P V Y + RVE+ +F M + +
Sbjct: 307 TLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D Y +I F DG++ A + + V+ G + D Y+A+I+ LC + +A+ LF
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLF 426
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF-LPDFVIQF-------- 298
+ ++ P T + +M AY ++ S ++ + + G+ + D++ QF
Sbjct: 427 QVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADE 486
Query: 299 -----------------SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
S+ +N L+ L + + ++L + M ++G PD+ SY+
Sbjct: 487 EKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYS 546
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD----------------- 384
+ F + ++K A ++ E Y SL +GL
Sbjct: 547 IAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGN 606
Query: 385 ------EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
E Y+ + N +KV K+ EM + G + V I+G++K T +
Sbjct: 607 VESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKV 666
Query: 439 AKGILLRMISSQCLTMPSYIIYDTLI 464
A+ + + + +T ++Y+ ++
Sbjct: 667 AREVFTELKKRKVMTEADMVVYEEML 692
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 164/413 (39%), Gaps = 73/413 (17%)
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M + G PS + I + + R + ++ M + G P + YN ++ ++G
Sbjct: 184 MDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGY 243
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
+ AL + + E G++ + T+ L++ LC G + E LE+L+ R
Sbjct: 244 FDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEE----MLEILQ-----------R 288
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
+ C P + + A+I L S +D +L +
Sbjct: 289 MRENLC----------------------------KPDVFAYTAMIKTLVSEGNLDASLRV 320
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD 384
M + PD ++Y T++ G C+ +++ YEL +EM K I +D Y L+EG
Sbjct: 321 WDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEG--- 377
Query: 385 EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILL 444
+ A G ++ L ++ +GY+ D I GL A +
Sbjct: 378 ----------FVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQ 427
Query: 445 RMISSQ--------CLTMPSYIIYDTLIENCSYVEFKSAVGL-VKDFSTRGLV------N 489
I + M +Y++ + L + + +E +G V D+ T+
Sbjct: 428 VAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEE 487
Query: 490 EAAIAHERMHNMSVKPDGAV--YNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
+ A+A + + + K G+V YN+L+ + G++ K+ ++ EM GF P
Sbjct: 488 KNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEP 540
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 133/375 (35%), Gaps = 74/375 (19%)
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
A ++G D +YNA ++G A ++ +G P + + LI+
Sbjct: 148 AGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNR 207
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
+ ++ +M + P Y R+M A G F +A ++++ + G + +
Sbjct: 208 RGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEEST--- 264
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
TF L+ GLC R++E L IL+ M E PD +
Sbjct: 265 -----TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFA------------------- 300
Query: 359 LKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLP 418
Y++++ ++GN+ ++ EM R+ P
Sbjct: 301 -----------------------------YTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 419 DSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGL 478
D + G + GL K + + M Q L IY LIE G
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI--DREIYRVLIE-----------GF 378
Query: 479 VKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
V D G V A E + + D +YN +I C V+KAY++++ +
Sbjct: 379 VAD----GKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEEL 434
Query: 539 FPHMFSVLSLIHALY 553
P F LS I Y
Sbjct: 435 EPD-FETLSPIMVAY 448
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 179/394 (45%), Gaps = 56/394 (14%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
E+A +V +M ++ D TY +I M ++ AV L+++M GL+ N Y +L
Sbjct: 252 EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTL 311
Query: 127 IDLLCTW-WLDKAYKVFNEMIASGFLPSVATYN--------------------------- 158
+ +L +DKA +VF+ M+ +G P+ TY+
Sbjct: 312 MQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMT 371
Query: 159 KFITAYLSSE-----RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKA 213
+ I +YL V +A +F M + + SY +++ C G+ +A+E+ +
Sbjct: 372 QGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLS 431
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
+ EKG++ D + Y+ + AL + DLF +M + SP TY L+ ++ VG
Sbjct: 432 KIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
E A ++ +E+ PD ++++N+LI+ L VDEA + M E GL
Sbjct: 492 EVDEAINIFEELERSDCKPD--------IISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE-VTYSSLL 392
+PD V+Y+T++ F + ++ AY L EM L++G VTY+ LL
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEM--------------LVKGCQPNIVTYNILL 589
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVF 426
+ G + L +M + G PDS+T V
Sbjct: 590 DCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 118/525 (22%), Positives = 212/525 (40%), Gaps = 93/525 (17%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
++K +++ +A +V E+ R G D YN L+ + K A ++++ M
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK---ACQVFEDM 261
Query: 112 RVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
+ R +E TY +I + D+A +FNEMI G +V YN + + V
Sbjct: 262 KKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGEL---EKALEIKAETVEKGILPDDVTY 227
++A+ +FS M E G P+ +Y+ +++ +G+L + +EI + +GI Y
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGI------Y 375
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
S L++ L G + EA LF +M V +Y ++ + C G+ A + ++
Sbjct: 376 SYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHE 435
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
+G + D ++ +N + L L+++ + M + G SPD +YN ++ F
Sbjct: 436 KGVVTDTMM--------YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKL 407
++ E+DE I +E D ++Y+SL+N G++ +
Sbjct: 488 GRVG----------EVDEAINIFEELERSDCK---PDIISYNSLINCLGKNGDVDEAHVR 534
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENC 467
+EM G PD VT Y TL+E C
Sbjct: 535 FKEMQEKGLNPDVVT-------------------------------------YSTLME-C 556
Query: 468 SYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAY 527
F V A E M +P+ YN+L+ + G +A
Sbjct: 557 --------------FGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAV 602
Query: 528 EMYKEMVHYGFFPH--MFSVLSLIHALYYD-----RKNSEMGWVI 565
++Y +M G P ++VL + ++ + RKN GWV+
Sbjct: 603 DLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIRRKNPITGWVV 647
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 200/494 (40%), Gaps = 78/494 (15%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
E+ + +R + + L + TY L+ + R+ A ++Y ++R G + Y L
Sbjct: 185 EDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNML 244
Query: 127 IDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
+D L +KA +VF +M TY I + ++A+G+F+ M GL+
Sbjct: 245 LDALAKD--EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLT 302
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
++V YN ++ + ++KA+++ + VE G P++ TYS L+ L +G L
Sbjct: 303 LNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVR---- 358
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
L G V S T+ +Y+Y LV S H+ + HR F + ++
Sbjct: 359 ----LDGVVEISKRYMTQGIYSY-LVRTLSKLGHVSEA--HRLFCDMWSFPVKGERDSYM 411
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
+++ LC + EA+ +L + E G+ D + YNTV +++++
Sbjct: 412 SMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQI------------- 458
Query: 367 IIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVF 426
S ++D F + M ++G PD T +
Sbjct: 459 -----------------------SHIHDLFEK------------MKKDGPSPDIFTYNIL 483
Query: 427 INGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRG 486
I + A I + S C P I Y++LI NC G
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDC--KPDIISYNSLI-NC--------------LGKNG 526
Query: 487 LVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVL 546
V+EA + + M + PD Y+ L+ + V AY +++EM+ G P++ +
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYN 586
Query: 547 SLIHALYYDRKNSE 560
L+ L + + +E
Sbjct: 587 ILLDCLEKNGRTAE 600
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P + ++ +I ++EA + E+ R PD +YN+LI + K ++ A
Sbjct: 475 PDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVR 534
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+ +M+ +GL+P+ TY +L++ T ++ AY +F EM+ G P++ TYN +
Sbjct: 535 FKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEK 594
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAV 195
+ R +A+ ++S M ++GL+PD ++Y +
Sbjct: 595 NGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 116/241 (48%), Gaps = 1/241 (0%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
+ ++ LC+ + A ++R M RKGL PD TY L+ G C M A E D+M
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 113 VRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
RG +P R LI+ LL +L+ A ++ ++M GF+P + T+N I A S VE
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
+ ++ + GL D+ +Y +I + G++++A + VE G P Y+ +I
Sbjct: 305 FCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPII 364
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
+ +C G +AF F +M P+ YT L+ G+F A + EM G +
Sbjct: 365 KGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLV 424
Query: 292 P 292
P
Sbjct: 425 P 425
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 132/294 (44%), Gaps = 10/294 (3%)
Query: 56 VIKELCEKERMEEAKEVVREMNRK-GLAPDCETYNALICGMCKVRNMLCAVELYDQMRVR 114
+I++ + +++A E+ + + G + YN+L+ +C V+ A L +M +
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 115 GLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQA 173
GL P++RTY L++ C+ + +A + +EM GF P + I L++ +E A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA 233
+ S M + G PD+ ++N +I + GE+E +E+ + G+ D TY LI A
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 234 LCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
+ G + EAF L + P S Y ++ C G F AF +M+
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMK------- 384
Query: 294 FVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
V P+ + LI + +A L M EMGL P + ++ V G
Sbjct: 385 -VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGL 437
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 97/233 (41%), Gaps = 9/233 (3%)
Query: 135 LDKAYKVFNEMIAS-GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
+D+A ++FN + + G +V YN + A + A + M +GL PD +Y
Sbjct: 162 VDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+++ +C G++++A E E +G P LI+ L G L A ++ +M +G
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
P T+ L+ A GE ++ G D + T+ LI +
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVD--------IDTYKTLIPAVS 333
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
+ ++DEA +L E G P Y ++ G C+ A+ +M K
Sbjct: 334 KIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVK 386
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 141/355 (39%), Gaps = 37/355 (10%)
Query: 150 FLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKAL 209
+ P+ Y + + S ++ E I M + L + +I ++ ++G +++A+
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 210 EIKAETVEK-GILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
E+ + G Y++L+ ALC A+ L M+R + P TY L+
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
+C G+ A DEM RGF +P + LI GL + ++ A ++ M
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGF--------NPPARGRDLLIEGLLNAGYLESAKEMVSKM 278
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV-T 387
+ G PD ++N ++ + E+ E +EM Y + GL ++ T
Sbjct: 279 TKGGFVPDIQTFNILIEAISKSGEV----EFCIEM----------YYTACKLGLCVDIDT 324
Query: 388 YSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM- 446
Y +L+ G + + F+L +G+ P I G+ + A M
Sbjct: 325 YKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMK 384
Query: 447 ISSQCLTMPSYIIYDTL-------IENCSYVEFKSAVGLVK-----DFSTRGLVN 489
+ + P Y + T+ ++ +Y+ + +GLV D T GL N
Sbjct: 385 VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKN 439
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 38/233 (16%)
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+N+L+H LC ++ A ++R M GL PD +Y ++ G+C ++K+A E EM
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 365 EKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
+ + L+EG LLN G ++ ++ +MT+ G++PD T
Sbjct: 245 RRGFNPPARGRDLLIEG---------LLN----AGYLESAKEMVSKMTKGGFVPDIQTFN 291
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFST 484
+ I ++K C+ M Y T + V+ + L+ S
Sbjct: 292 ILIEAISKSGEVEF------------CIEM-----YYTACKLGLCVDIDTYKTLIPAVSK 334
Query: 485 RGLVNEAAIAHERMHNMSV----KPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
G ++EA R+ N V KP ++Y +I CR G + A+ + +M
Sbjct: 335 IGKIDEAF----RLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDM 383
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 119/243 (48%), Gaps = 10/243 (4%)
Query: 116 LSPNERTYMSLIDLLCTW--WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQA 173
+P + ++D+L + +L KA+++F G +P+ +YN + A+ ++ + A
Sbjct: 150 FTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIA 209
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA 233
+F M ER + PD+ SY +I FC+ G++ A+E+ + + KG +PD ++Y+ L+ +
Sbjct: 210 YQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNS 269
Query: 234 LCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
LC + L EA+ L M +P Y ++ +C A + D+M G
Sbjct: 270 LCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNG---- 325
Query: 294 FVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
SP+ V++ LI GLC DE L M G SP N ++ GFC ++
Sbjct: 326 ----CSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKV 381
Query: 354 KKA 356
++A
Sbjct: 382 EEA 384
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 10/305 (3%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC-AVELYDQM 111
F +IK E + E+ +M P + N ++ + R L A EL+
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
R+ G+ PN R+Y L+ C L AY++F +M+ +P V +Y I + +V
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
A+ + M +G PD +SY +++ C+ +L +A ++ KG PD V Y+ +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
I C + +A + +ML SP++ +Y L+ C G F +EM +GF
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGF 361
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
P F + N L+ G CS +V+EA ++ + + G + + ++ V+ C
Sbjct: 362 SPHFSVS--------NCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE 413
Query: 351 RELKK 355
E +K
Sbjct: 414 DESEK 418
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 1/224 (0%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P S+ +++ C + + A ++ +M + + PD ++Y LI G C+ + A+EL
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMEL 247
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
D M +G P+ +Y +L++ LC L +AYK+ M G P + YN I +
Sbjct: 248 LDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCR 307
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+R A + M G SP+ VSY +I C G ++ + E + KG P
Sbjct: 308 EDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSV 367
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
+ L++ C G + EA D+ +++ + + T+ ++ C
Sbjct: 368 SNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 19 VMIRGFATESVMSCKEKKVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEV 72
++I+GF C++ +V LL P +S+ ++ LC K ++ EA ++
Sbjct: 230 ILIQGF-------CRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT 132
+ M KG PD YN +I G C+ + A ++ D M G SPN +Y +LI LC
Sbjct: 283 LCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCD 342
Query: 133 WWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+ D+ K EMI+ GF P + N + + S +VE+A + + + G + +
Sbjct: 343 QGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDT 402
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ VI C + E EK + V++ I D
Sbjct: 403 WEMVIPLICNEDESEKIKLFLEDAVKEEITGD 434
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 27/278 (9%)
Query: 206 EKALEIKAETVEKGILPDDVTYSALIQALCL-QGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
EK L + +E P + ++ L +G L +AF+LF V P+ +Y
Sbjct: 136 EKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNL 195
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
LM A+CL + S+A+ L +M R +PD + ++ LI G C +V+ A+ +
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPD--------VDSYKILIQGFCRKGQVNGAMEL 247
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS- 383
L M G PD +SY T+L C+ +L++AY+L M ++G +
Sbjct: 248 LDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK--------------LKGCNP 293
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL 443
D V Y++++ + + K+ +M NG P+SV+ I GL + K L
Sbjct: 294 DLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYL 353
Query: 444 LRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVK 480
MIS P + + + L++ CS+ + + A +V+
Sbjct: 354 EEMISKG--FSPHFSVSNCLVKGFCSFGKVEEACDVVE 389
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 109/250 (43%), Gaps = 32/250 (12%)
Query: 297 QFSPSLVTFNALIHGLCSLER-VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
F+P N ++ L S + +A + + G+ P+ SYN ++ FC +L
Sbjct: 149 NFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI 208
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
AY+L +M E+ + D +Y+ L++G + +G + +L +M G
Sbjct: 209 AYQLFGKMLERDVVPDVDSYKILIQG-------------FCRKGQVNGAMELLDDMLNKG 255
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSA 475
++PD ++ +N L +K A +L RM C P + Y+T+I
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC--NPDLVHYNTMI----------- 302
Query: 476 VGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVH 535
+G ++ R + +A + M + P+ Y LI C +G ++ + +EM+
Sbjct: 303 LGFCRE--DRAM--DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMIS 358
Query: 536 YGFFPHMFSV 545
GF PH FSV
Sbjct: 359 KGFSPH-FSV 367
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 162/336 (48%), Gaps = 11/336 (3%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P +V++ ++ + +EA+ V R MN G+ PD TY+ L+ K+R +
Sbjct: 243 IQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVC 302
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+L +M G P+ +Y L++ + + +A VF++M A+G P+ TY+ + +
Sbjct: 303 DLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
S R + +F M PD +YN +I F + G ++ + + + VE+ I PD
Sbjct: 363 GQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDM 422
Query: 225 VTYSALIQALCLQGSLPE-AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
TY +I A C +G L E A + M D+ PS+ YT ++ A+ + A +
Sbjct: 423 ETYEGIIFA-CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
M G +PS+ TF++L++ V E+ IL + + G+ + ++N
Sbjct: 482 TMHEVG--------SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQ 533
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
+ + Q + ++A + V+M++ DE T E+++
Sbjct: 534 IEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL 569
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 159/357 (44%), Gaps = 36/357 (10%)
Query: 75 EMNRKGLAPDCETYNALICGMCKVRNMLCAVEL-YDQMRVRGLSPNERTYMSLIDLLCTW 133
EM +G+ PD TYN L+ C +R + E+ + M G+ P+ TY L++
Sbjct: 237 EMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKL 295
Query: 134 W-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
L+K + EM + G LP + +YN + AY S +++A+G+F M G +P+ +Y
Sbjct: 296 RRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
+ +++ F Q G + ++ E PD TY+ LI+ G E LF +M+
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF------SPSLVTFN 306
++ P TY +++A C G LH++ R ++Q+ PS +
Sbjct: 416 ENIEPDMETYEGIIFA-CGKG------GLHEDARK-------ILQYMTANDIVPSSKAYT 461
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
+I +EAL M E+G +P +++++L+ F + +K++ + + +
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDS 521
Query: 367 IIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
I + T+ + +E Y G ++ K +M ++ PD TL
Sbjct: 522 GIPRNRDTFNAQIEA-------------YKQGGKFEEAVKTYVDMEKSRCDPDERTL 565
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 10/277 (3%)
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
EV EM +G++ +Y ALI + ++EL D+M+ +SP+ TY ++I+
Sbjct: 162 EVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 131 CTWWLD--KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
LD +F EM G P + TYN ++A ++A +F M + G+ PD
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
L +Y+ ++ F + LEK ++ E G LPD +Y+ L++A GS+ EA +F
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNAL 308
+M +P+ +TY+ L+ + G + L EM+ PD T+N L
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD--------AATYNIL 393
Query: 309 IHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
I E + + M E + PD +Y ++F
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 430
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 156/368 (42%), Gaps = 46/368 (12%)
Query: 189 LVSYNAVISKFCQDGELEKALEI-KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
L + V +F G+ +++L + K + P++ Y+ +I L +G L + ++F
Sbjct: 105 LNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
EM VS S +YT L+ AY G + + L D M++ + SPS++T+N
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE--------KISPSILTYNT 216
Query: 308 LIHGLCSLERVDEA--LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
+I+ C+ +D LG+ M G+ PD V+YNT+L C IR L E+
Sbjct: 217 VINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEM------ 268
Query: 366 KIIWLDEYTYESLMEG--LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
+ ++ +G + D TYS L+ + ++KV L EM G LPD +
Sbjct: 269 --------VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSY 320
Query: 424 GVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFS 483
V + K + A G+ +M ++ C P+ Y L+ F
Sbjct: 321 NVLLEAYAKSGSIKEAMGVFHQMQAAGC--TPNANTYSVLL---------------NLFG 363
Query: 484 TRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMF 543
G ++ M + + PD A YN+LI G + ++ +MV P M
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 544 SVLSLIHA 551
+ +I A
Sbjct: 424 TYEGIIFA 431
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 161/423 (38%), Gaps = 76/423 (17%)
Query: 152 PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI 211
P+ Y I+ +++ L +F M +G+S + SY A+I+ + ++G E +LE+
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 212 K------------------------------------AETVEKGILPDDVTYSALIQALC 235
AE +GI PD VTY+ L+ A
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
++G EA +F M G + P +TY+ L+ + + L EM G LPD
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD-- 316
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
+ ++N L+ + EA+G+ M G +P+A +Y+ +L F Q
Sbjct: 317 ------ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 370
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGN-MQKVFKLEREMTRN 414
+L +EM D TY L+E F +G ++V L +M
Sbjct: 371 VRQLFLEMKSSNTDPDAATYNILIE--------------VFGEGGYFKEVVTLFHDMVEE 416
Query: 415 GYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKS 474
PD T I K A+ IL M ++ + PS Y
Sbjct: 417 NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV--PSSKAY-------------- 460
Query: 475 AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
G+++ F L EA +A MH + P ++ L++ R G V ++ + +V
Sbjct: 461 -TGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLV 519
Query: 535 HYG 537
G
Sbjct: 520 DSG 522
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 15/325 (4%)
Query: 21 IRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKG 80
IRG E+ M + G G++ P L ++ +++ + R+E+ +++ EM G
Sbjct: 259 IRGLGDEAEMVFRTMNDG---GIV---PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 81 LAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAY 139
PD +YN L+ K ++ A+ ++ QM+ G +PN TY L++L + D
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372
Query: 140 KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
++F EM +S P ATYN I + ++ + +F M E + PD+ +Y +I
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 200 CQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
+ G E A +I I+P Y+ +I+A EA F M +PS
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVD 319
T+ L+Y++ G + + + G +P + TFNA I + +
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSG-IPR-------NRDTFNAQIEAYKQGGKFE 544
Query: 320 EALGILRGMPEMGLSPDAVSYNTVL 344
EA+ M + PD + VL
Sbjct: 545 EAVKTYVDMEKSRCDPDERTLEAVL 569
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 173/424 (40%), Gaps = 40/424 (9%)
Query: 6 ATLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRM------EPYLVSFKGVIKE 59
A+ S + NV++ +A K + E G+ P ++ ++
Sbjct: 309 ASGGSLPDITSYNVLLEAYA-------KSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
Query: 60 LCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPN 119
+ R ++ +++ EM PD TYN LI + V L+ M + P+
Sbjct: 362 FGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPD 421
Query: 120 ERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
TY +I L + A K+ M A+ +PS Y I A+ + E+AL F+
Sbjct: 422 METYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 179 AMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
M E G +P + ++++++ F + G ++++ I + V+ GI + T++A I+A G
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGG 541
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
EA +++M + P T ++ Y +EM+ L
Sbjct: 542 KFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDIL------- 594
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
PS++ + ++ ER D+ +L M LS + + V+
Sbjct: 595 -PSIMCYCMMLAVYGKTERWDDVNELLEEM----LSNRVSNIHQVI-----------GQM 638
Query: 359 LKVEMDEKIIW-LDEYTYESL-MEGLSDEVT-YSSLLNDYFAQGNMQKVFKLEREMTRNG 415
+K + D+ W + EY + L EG + Y++LL+ + G ++ ++ E T+ G
Sbjct: 639 IKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRG 698
Query: 416 YLPD 419
P+
Sbjct: 699 LFPE 702
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 175/394 (44%), Gaps = 32/394 (8%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
+V + K + + R +A +F +AE G P L+SY +++ + I
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIV 103
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
+E + G D + ++A+I A G++ +A L+M ++P+ STY L+ Y +
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
G+ + L D M G + P++ TFN L+ C ++V+EA +++ M E G
Sbjct: 164 GKPERSSELLDLMLEEGN-----VDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECG 218
Query: 333 LSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL 392
+ PD V+YNT+ + Q E +A + E+ EK++ ++ G+ ++
Sbjct: 219 VRPDTVTYNTIATCYVQKGETVRA---ESEVVEKMVMKEKAKPNGRTCGI--------VV 267
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING----LNKKATTSIAKGILL---- 444
Y +G ++ + R M + V ING +++ + +LL
Sbjct: 268 GGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFN 327
Query: 445 ---RMISSQCLTMPSYIIYDTLIENCSY-VEFKSAVGLVKDFSTRGLVNEAAIAHERMHN 500
++ +Q + + TL++ C+ + + ++ +S+ G + +AA + M
Sbjct: 328 EEVELVGNQKMKVQVL----TLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVK 383
Query: 501 MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
VKPD Y++L + R KA E+ + ++
Sbjct: 384 AGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI 417
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 193/459 (42%), Gaps = 62/459 (13%)
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A VF + +G PS+ +Y + A ++ I S + + G D + +NAVI
Sbjct: 63 EAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVI 122
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL---PEAFDLFLEMLRG 253
+ F + G +E A++ + E G+ P TY+ LI+ + G E DL LE
Sbjct: 123 NAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNV 182
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI----------------- 296
DV P+ T+ L+ A+C + A+ + +M G PD V
Sbjct: 183 DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRA 242
Query: 297 ------------QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
+ P+ T ++ G C RV + L +R M EM + + V +N+++
Sbjct: 243 ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLI 302
Query: 345 FGFCQIRELKKAYELKVEM-----DEKIIWLDEYTYE----SLMEGL---SDEVTYSSLL 392
GF ++ + E+ + + +E++ + + +LM+ +D +TYS+++
Sbjct: 303 NGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVM 362
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
N + + G M+K ++ +EM + G PD+ + G + A+ +L +I
Sbjct: 363 NAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVE--- 419
Query: 453 TMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNL 512
+ P+ +I+ T+I + + G +++A +M V P+ +
Sbjct: 420 SRPNVVIFTTVISG---------------WCSNGSMDDAMRVFNKMCKFGVSPNIKTFET 464
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
L++ + KA E+ + M G P + L L A
Sbjct: 465 LMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEA 503
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/441 (21%), Positives = 199/441 (45%), Gaps = 52/441 (11%)
Query: 17 MNVMI-RGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVRE 75
MNV+I RG E+ + V +T P L+S+ ++ + +++ +V E
Sbjct: 52 MNVLIERGRPHEA------QTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSE 105
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWW 134
+ + G D +NA+I + NM AV+ +M+ GL+P TY +LI
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 135 LDKAYKVFNEMIASGFL---PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+++ ++ + M+ G + P++ T+N + A+ ++VE+A + M E G+ PD V+
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGIL-----PDDVTYSALIQALCLQGSLPEAFDL 246
YN + + + Q GE +A ++E VEK ++ P+ T ++ C +G + +
Sbjct: 226 YNTIATCYVQKGETVRA---ESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRF 282
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGE-----------FSMAFHLHDEMRHRGFLPDFV 295
M V + + L+ + V + M+F+ E+ + V
Sbjct: 283 VRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQV 342
Query: 296 IQF------SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
+ ++T++ +++ S +++A + + M + G+ PDA +Y+ + G+ +
Sbjct: 343 LTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 402
Query: 350 IRELKKAYELKVEMDEKIIWLDEYTYESLM-EGLSDEVTYSSLLNDYFAQGNMQKVFKLE 408
+E KKA EL E+L+ E + V ++++++ + + G+M ++
Sbjct: 403 AKEPKKAEEL---------------LETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVF 447
Query: 409 REMTRNGYLPDSVTLGVFING 429
+M + G P+ T + G
Sbjct: 448 NKMCKFGVSPNIKTFETLMWG 468
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 162/355 (45%), Gaps = 40/355 (11%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRME------PYLVSFKGVIKELCEKERMEEAKE 71
N +I+G+ ++ K ++ E L+ E P + +F +++ C+K+++EEA E
Sbjct: 154 NTLIKGYG----IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWE 209
Query: 72 VVREMNRKGLAPDCETYNAL-ICGMCKVRNMLCAVELYDQMRVR-GLSPNERTYMSLIDL 129
VV++M G+ PD TYN + C + K + E+ ++M ++ PN RT ++
Sbjct: 210 VVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGG 269
Query: 130 LC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
C + + M ++ +N I G M G+ D
Sbjct: 270 YCREGRVRDGLRFVRRMKEMRVEANLVVFNSLIN------------GFVEVMDRDGI--D 315
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETV----EKGILPDDVTYSALIQALCLQGSLPEAF 244
V+ ++ F ++ EL ++K + + E + D +TYS ++ A G + +A
Sbjct: 316 EVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAA 375
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+F EM++ V P Y+ L Y E A L L +++ P++V
Sbjct: 376 QVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL---------LETLIVESRPNVVI 426
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
F +I G CS +D+A+ + M + G+SP+ ++ T+++G+ ++++ KA E+
Sbjct: 427 FTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 481
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 153/348 (43%), Gaps = 18/348 (5%)
Query: 24 FATESVMSCKEKKVGETFGLL-RMEPY-----LVSFKGVIKELCEKERMEEAKEVVREMN 77
FA S + +KV E G +ME + F ++ L + + +A++V +M
Sbjct: 165 FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMK 224
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLD 136
+K PD ++Y L+ G + N+L E+ +M+ G P+ Y +I+ C +
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A + FNEM PS + I S +++ AL F G + +YNA++
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+C +E A + E KG+ P+ TY ++ L EA++++ M
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCE 401
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P+ STY ++ +C MA + DEM+ +G L P + F++LI LC
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVL--------PGMHMFSSLITALCHEN 453
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
++DEA M ++G+ P ++ + K +L V+MD
Sbjct: 454 KLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 8/283 (2%)
Query: 77 NRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLD 136
N+KG YNALI + K++ L D M+ + L E + +
Sbjct: 120 NQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVK 179
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A F++M GF + +N+ + S V A +F M ++ PD+ SY ++
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ Q+ L + E+ E ++G PD V Y +I A C EA F EM + +
Sbjct: 240 EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCK 299
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
PS + L+ + + A + + GF + +P T+NAL+ C +
Sbjct: 300 PSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLE-----AP---TYNALVGAYCWSQ 351
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
R+++A + M G+ P+A +Y+ +L +++ K+AYE+
Sbjct: 352 RMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEV 394
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 151/338 (44%), Gaps = 18/338 (5%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
+F + + +++EA +M G + +N ++ + K RN+ A +++D+M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 112 RVRGLSPNERTYMSLIDLLCTWWLD----KAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
+ + P+ ++Y L++ W + + +V EM GF P V Y I A+ +
Sbjct: 224 KKKRFEPDIKSYTILLE---GWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 280
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
++ E+A+ F+ M +R P + ++I+ + +L ALE + G + TY
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTY 340
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+AL+ A C + +A+ EM V P+ TY +++ + A+ ++ M
Sbjct: 341 NALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM-- 398
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
P++ T+ ++ C+ ER+D A+ I M G+ P +++++
Sbjct: 399 ---------SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE 385
C +L +A E EM + I + + L + L DE
Sbjct: 450 CHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDE 487
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 10/228 (4%)
Query: 32 CKEKKVGETFGLL-RME-----PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK KK E ME P F +I L ++++ +A E G +
Sbjct: 278 CKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEA 337
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNE 144
TYNAL+ C + M A + D+MR++G+ PN RTY ++ L K AY+V+
Sbjct: 338 PTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQT 397
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M P+V+TY + + + ER++ A+ I+ M +G+ P + ++++I+ C + +
Sbjct: 398 MSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENK 454
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
L++A E E ++ GI P +S L Q L +G + DL ++M R
Sbjct: 455 LDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDR 502
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 132/357 (36%), Gaps = 80/357 (22%)
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
+ S Y L+ + + +F + + L D+M+ + L S TF + +
Sbjct: 127 TTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLL---------SKETFALISRRYARARK 177
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
V EA+G M E G ++ +N +L + R + A ++ +M +K D +Y
Sbjct: 178 VKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 378 LMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTS 437
L+EG E+ N+ +V ++ REM G+ PD V G+ IN K
Sbjct: 238 LLEGWGQEL-------------NLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 438 IAKGILLRMISSQCLTMPSYIIYDTLIEN------------------------------- 466
A M C PS I+ +LI
Sbjct: 285 EAIRFFNEMEQRNC--KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNA 342
Query: 467 -----CSYVEFKSAVGLVKDFSTRGL----------------VNEAAIAHERMHNMSVKP 505
C + A V + +G+ + + A+E MS +P
Sbjct: 343 LVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEP 402
Query: 506 DGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP--HMFSVLSLIHALYYDRKNSE 560
+ Y +++ C + ++ A +++ EM G P HMFS SLI AL ++ K E
Sbjct: 403 TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFS--SLITALCHENKLDE 457
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 13/253 (5%)
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL---DKAY 139
P +YNA++ + V+ +Y+QM G +P+ TY I + + L D+ Y
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYN--IVMFANFRLGKTDRLY 277
Query: 140 KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
++ +EM+ GF P + TYN + + + AL + + M E G+ P ++ + +I
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 200 CQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
+ G+LE ETV+ G PD V Y+ +I G L +A ++F EM P+
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVD 319
TY ++ +C+ G+F A L EM RG P+FV+ ++ L++ L + +V
Sbjct: 398 FTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVV--------YSTLVNNLKNAGKVL 449
Query: 320 EALGILRGMPEMG 332
EA +++ M E G
Sbjct: 450 EAHEVVKDMVEKG 462
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 137/300 (45%), Gaps = 17/300 (5%)
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
++ EM + G T+N LIC + VE + + + P + +Y +++ L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLL 233
Query: 132 TWWLDKAYK----VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
K YK V+ +M+ GF P V TYN + A + ++ + M + G SP
Sbjct: 234 GV---KQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSP 290
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
DL +YN ++ + AL + E G+ P + ++ LI L G L EA F
Sbjct: 291 DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKL-EACKYF 349
Query: 248 L-EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
+ E ++ +P YT ++ Y GE A + EM +G LP+ + T+N
Sbjct: 350 MDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPN--------VFTYN 401
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
++I G C + EA +L+ M G +P+ V Y+T++ ++ +A+E+ +M EK
Sbjct: 402 SMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
PY S+ ++ L ++ + V +M G PD TYN ++ ++ L
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEMIASGFLPSVATYNKFITAYLS 166
D+M G SP+ TY L+ L T A + N M G P V + I
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+ ++E + G +PD+V Y +I+ + GELEKA E+ E EKG LP+ T
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
Y+++I+ C+ G EA L EM +P+ Y+ L+ G+ A + +M
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Query: 287 HRG 289
+G
Sbjct: 460 EKG 462
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 159/407 (39%), Gaps = 108/407 (26%)
Query: 140 KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
++ +EMI G+ + T+N I E GL+ D V+ +F
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLI----------------CTCGEAGLARD------VVEQF 210
Query: 200 CQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSN 259
IK++T P +Y+A++ +L ++ +ML +P
Sbjct: 211 -----------IKSKTFN--YRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDV 257
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVD 319
TY +M+A +G+ + L DEM GF SP L T+N L+H L + +
Sbjct: 258 LTYNIVMFANFRLGKTDRLYRLLDEMVKDGF--------SPDLYTYNILLHHLATGNKPL 309
Query: 320 EALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
AL +L M E+G+ P + + T++ G + +L+ K MDE + +
Sbjct: 310 AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEAC---KYFMDETV----------KV 356
Query: 380 EGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIA 439
D V Y+ ++ Y + G ++K ++ +EMT G LP+ T I G
Sbjct: 357 GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGF--------- 407
Query: 440 KGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMH 499
C +FK A L+K+ +RG
Sbjct: 408 ---------------------------CMAGKFKEACALLKEMESRG------------- 427
Query: 500 NMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVL 546
P+ VY+ L+ + G V +A+E+ K+MV G + H+ S L
Sbjct: 428 ---CNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKL 471
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 135/323 (41%), Gaps = 43/323 (13%)
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
Y+ ++ F + GE + + E ++ G T++ LI G + + F++
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI--------------- 296
+ P +Y ++++ V ++ + ++++M GF PD +
Sbjct: 215 TFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTD 274
Query: 297 ------------QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
FSP L T+N L+H L + + AL +L M E+G+ P + + T++
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
G + +L+ K MDE + + D V Y+ ++ Y + G ++K
Sbjct: 335 DGLSRAGKLEAC---KYFMDETV----------KVGCTPDVVCYTVMITGYISGGELEKA 381
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
++ +EMT G LP+ T I G A +L M S C P++++Y TL+
Sbjct: 382 EEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGC--NPNFVVYSTLV 439
Query: 465 ENCSYV-EFKSAVGLVKDFSTRG 486
N + A +VKD +G
Sbjct: 440 NNLKNAGKVLEAHEVVKDMVEKG 462
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 124/320 (38%), Gaps = 49/320 (15%)
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA 321
Y LM + GE+ L DEM G+ + TFN LI C+ A
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGY--------PTTACTFNLLI---CTCGEAGLA 203
Query: 322 LGILRGM---PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
++ P SYN +L +++ K L ++ YE +
Sbjct: 204 RDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYK---------------LIDWVYEQM 248
Query: 379 ME-GLSDEV-TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATT 436
+E G + +V TY+ ++ F G ++++L EM ++G+ PD T + ++ L
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 437 SIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHE 496
A +L M + P I + TLI+ S A D + +
Sbjct: 309 LAALNLLNHM--REVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVK----------- 355
Query: 497 RMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDR 556
+ PD Y ++I + G + KA EM+KEM G P++F+ S+I
Sbjct: 356 ----VGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAG 411
Query: 557 KNSEMGWVIRN-TLRSCNLN 575
K E +++ R CN N
Sbjct: 412 KFKEACALLKEMESRGCNPN 431
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+EP ++ F +I L ++E K + E + G PD Y +I G + A
Sbjct: 323 VEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAE 382
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E++ +M +G PN TY S+I C +A + EM + G P+ Y+ +
Sbjct: 383 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVS 191
++ +V +A + M E+G L+S
Sbjct: 443 KNAGKVLEAHEVVKDMVEKGHYVHLIS 469
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 108/195 (55%), Gaps = 2/195 (1%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+EP V+ ++ LCE R++EAK++++E+ K PD TYN L+ +CK +++
Sbjct: 155 LEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVY 214
Query: 106 ELYDQMRVR-GLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
E D+MR + P+ ++ LID +C + L +A + +++ +GF P YN +
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + + +A+G++ M E G+ PD ++YN +I + G +E+A V+ G PD
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPD 334
Query: 224 DVTYSALIQALCLQG 238
TY++L+ +C +G
Sbjct: 335 TATYTSLMNGMCRKG 349
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 143/315 (45%), Gaps = 25/315 (7%)
Query: 125 SLIDLLCTWWLDKAYKVFNEMIASGFLP-SVATYNKFITAYLSSERVEQALGIFSAM--A 181
SL + + L A +FN + A+ +P + +N + +Y S V + +F + +
Sbjct: 55 SLRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKS 114
Query: 182 ERGLSPDLVSYNAVISKFCQ--DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS 239
+ P ++ ++S C+ D + + V G+ PD VT +++LC G
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGR 174
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
+ EA DL E+ P TY L+ C + + + DEMR DF ++
Sbjct: 175 VDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD-----DFDVK-- 227
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
P LV+F LI +C+ + + EA+ ++ + G PD YNT++ GFC + + +A +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 360 KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
+M E+ + D+ TY +L+ GLS G +++ + M GY PD
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLS-------------KAGRVEEARMYLKTMVDAGYEPD 334
Query: 420 SVTLGVFINGLNKKA 434
+ T +NG+ +K
Sbjct: 335 TATYTSLMNGMCRKG 349
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 43/300 (14%)
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRG--DVSPSNSTYTRLMYAYCLVGEFSMAFHLH-- 282
+++++Q+ + + LF +L+ + P ST+ L+ C + S++ ++H
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSIS-NVHRV 146
Query: 283 -DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+ M + G PD VT + + LC RVDEA +++ + E PD +YN
Sbjct: 147 LNLMVNNGLEPD--------QVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM 401
+L C+ ++L YE EM D++ + D V+++ L+++ N+
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEM------RDDFDVKP------DLVSFTILIDNVCNSKNL 246
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
++ L ++ G+ PD + G + S A G+ +M P I Y+
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG--VEPDQITYN 304
Query: 462 TLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
TLI GL K G V EA + + M + +PD A Y L+ CR+G
Sbjct: 305 TLI-----------FGLSK----AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 117/241 (48%), Gaps = 7/241 (2%)
Query: 7 TLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERM 66
T+KSF N ++ + + K E L + P LV++ +IK LC K M
Sbjct: 156 TVKSF------NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
++ + E+ + G PD ++N L+ + + ++D M+ + LSPN R+Y S
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 127 I-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
+ L A + + M G P V TYN ITAY +E+ + ++ M E+GL
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
+PD V+Y +I C+ G+L++A+E+ E ++ +L Y +++ L G + EA
Sbjct: 330 TPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQ 389
Query: 246 L 246
L
Sbjct: 390 L 390
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 112/211 (53%), Gaps = 2/211 (0%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRK-GLAPDCETYNALICGMCKVRNML 102
L E + SF ++ ++++EA + +E+ K G+ PD TYN +I +C+ +M
Sbjct: 151 LNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMD 210
Query: 103 CAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFI 161
+ +++++ G P+ ++ +L++ L + ++++ M + P++ +YN +
Sbjct: 211 DILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRV 270
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
+++ AL + M G+SPD+ +YNA+I+ + D LE+ ++ E EKG+
Sbjct: 271 RGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
PD VTY LI LC +G L A ++ E ++
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 12/264 (4%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVR-GLSPNERTYMS 125
E A ++ EM +++NAL+ + + A++ + ++ + G++P+ TY +
Sbjct: 139 EHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNT 198
Query: 126 LIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
+I LC +D +F E+ +GF P + ++N + + E + I+ M +
Sbjct: 199 MIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKN 258
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
LSP++ SYN+ + ++ + AL + +GI PD TY+ALI A + +L E
Sbjct: 259 LSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVM 318
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE-MRHRGFLPDFVIQFSPSLV 303
+ EM ++P TY L+ C G+ A + +E ++H+ + P++
Sbjct: 319 KCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHK-------LLSRPNM- 370
Query: 304 TFNALIHGLCSLERVDEALGILRG 327
+ ++ L ++DEA +++
Sbjct: 371 -YKPVVERLMGAGKIDEATQLVKN 393
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 39/254 (15%)
Query: 238 GSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQ 297
G A LF EM + + ++ L+ AY + A E+ + +
Sbjct: 136 GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEK-------LG 188
Query: 298 FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL---- 353
+P LVT+N +I LC +D+ L I + + G PD +S+NT+L F + REL
Sbjct: 189 ITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR-RELFVEG 247
Query: 354 KKAYELKVEMDEKIIWLDEYTYESLMEGLS----------------------DEVTYSSL 391
+ ++L M K + + +Y S + GL+ D TY++L
Sbjct: 248 DRIWDL---MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 304
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC 451
+ Y N+++V K EM G PD+VT + I L KK A + I +
Sbjct: 305 ITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Query: 452 LTMPSYIIYDTLIE 465
L+ P+ +Y ++E
Sbjct: 365 LSRPN--MYKPVVE 376
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 118/274 (43%), Gaps = 48/274 (17%)
Query: 293 DFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRE 352
DFVI+ L++G + + A + MPE+ S+N +L + ++
Sbjct: 123 DFVIRI--------MLLYGYSGM--AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKK 172
Query: 353 LKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREM 411
L +A + E+ EK+ G++ D VTY++++ +G+M + + E+
Sbjct: 173 LDEAMKTFKELPEKL-------------GITPDLVTYNTMIKALCRKGSMDDILSIFEEL 219
Query: 412 TRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSY-V 470
+NG+ PD ++ + ++ + + ++ S+ L+ P+ Y++ + +
Sbjct: 220 EKNGFEPDLISFNTLLEEFYRRELF-VEGDRIWDLMKSKNLS-PNIRSYNSRVRGLTRNK 277
Query: 471 EFKSAVGLVKDFSTRGL-------------------VNEAAIAHERMHNMSVKPDGAVYN 511
+F A+ L+ T G+ + E + M + PD Y
Sbjct: 278 KFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYC 337
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFF--PHMF 543
+LI C++G++++A E+ +E + + P+M+
Sbjct: 338 MLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 183/416 (43%), Gaps = 32/416 (7%)
Query: 32 CKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNAL 91
C E F E ++++ V+ C+ + EEA E+V+EM ++G++P T+N L
Sbjct: 229 CGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNIL 288
Query: 92 ICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGF 150
I G ++ A++L +M G++ + T+ ++I L+ +A +F +M +G
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 151 LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE 210
+P+ T ++A + + Q + S + G D++ N+++ + + G+LE A +
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARK 408
Query: 211 IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
+ K D T++++I C G +A++LF M ++ P+ T+ ++ Y
Sbjct: 409 VFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYI 464
Query: 271 LVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPE 330
G+ A L M G + + T+N +I G + DEAL + R M
Sbjct: 465 KNGDEGEAMDLFQRMEKDG-------KVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF 517
Query: 331 MGLSPDAVSYNTV------LFGFCQIRELKKAYELKVEMDE----KIIWLDEYTYESLME 380
P++V+ ++ L G +RE+ L+ +D K D Y +E
Sbjct: 518 SRFMPNSVTILSLLPACANLLGAKMVREIHGCV-LRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 381 -------GL--SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFI 427
G+ D +T++SL+ Y G+ L +M G P+ TL I
Sbjct: 577 YSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/556 (19%), Positives = 226/556 (40%), Gaps = 67/556 (12%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
E L ++ +I + R E ++ R M + G+ PD + ++ G ++
Sbjct: 143 ERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
++ + G+S R S++ + LD A K F M V +N + AY
Sbjct: 203 IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAYC 258
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ + E+A+ + M + G+SP LV++N +I + Q G+ + A+++ + GI D
Sbjct: 259 QNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVF 318
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
T++A+I L G +A D+F +M V P+ T + A + + +H
Sbjct: 319 TWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIA 378
Query: 286 RHRGFLPDFVIQFS-----------------------PSLVTFNALIHGLCSLERVDEAL 322
GF+ D ++ S + T+N++I G C +A
Sbjct: 379 VKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAY 438
Query: 323 GILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL--KVEMDEKIIWLDEYTYESLME 380
+ M + L P+ +++NT++ G+ + + +A +L ++E D K+
Sbjct: 439 ELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV------------- 485
Query: 381 GLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT----LGVFINGLNKKATT 436
+ T++ ++ Y G + +L R+M + ++P+SVT L N L K
Sbjct: 486 -QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVR 544
Query: 437 SIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAV-------------GLVKDFS 483
I +L R + + + + DT ++ +E+ + L+ +
Sbjct: 545 EIHGCVLRRNLDA--IHAVKNALTDTYAKSGD-IEYSRTIFLGMETKDIITWNSLIGGYV 601
Query: 484 TRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVH-YGFFPHM 542
G A +M + P+ + +I H GNV++ +++ + + Y P +
Sbjct: 602 LHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPAL 661
Query: 543 FSVLSLIHALYYDRKN 558
++++ Y R N
Sbjct: 662 EHCSAMVY--LYGRAN 675
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 193/470 (41%), Gaps = 40/470 (8%)
Query: 104 AVELYDQMRVRGLSP-NERTYMSLIDLL---CTWWLDKAYKVFNEMIASGFLPSVATYNK 159
AVE+++ + +G N Y ++ +L C W ++ +++EMI G P +TY
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQS--LWDEMIRKGIKPINSTYGT 227
Query: 160 FITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI------KA 213
I Y AL M++ G+ PD V+ V+ + + E +KA E
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 214 ETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
+ + TY+ +I G + EA + F ML + P+ T+ +++ Y G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
+ L M+ + +P T+N LI ++ A + M + GL
Sbjct: 348 QLGEVTSLMKTMK---------LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGL 398
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL----MEGLSDEVTYS 389
PD VSY T+L+ F +++A L EMD+ + +DEYT +L +E E ++
Sbjct: 399 KPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSW- 457
Query: 390 SLLNDYFAQGNMQK---VFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
S + GNM ++ R GYL ++ + + +NK+ I
Sbjct: 458 SWFKRFHVAGNMSSEGYSANIDAYGER-GYLSEAERVFICCQEVNKRTVIEYNVMIKAYG 516
Query: 447 ISSQCLT----MPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMS 502
IS C S + Y + C+Y LV+ ++ + ++ E+M
Sbjct: 517 ISKSCEKACELFESMMSYGVTPDKCTYNT------LVQILASADMPHKGRCYLEKMRETG 570
Query: 503 VKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
D Y +I + G +N A E+YKEMV Y P + LI+A
Sbjct: 571 YVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 118/496 (23%), Positives = 202/496 (40%), Gaps = 27/496 (5%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
+++EA E + M +G+ P T+N +I + L M++ +P+ RTY
Sbjct: 313 QIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAPDTRTYN 371
Query: 125 SLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
LI L +++A F EM G P +Y + A+ VE+A G+ + M +
Sbjct: 372 ILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDD 431
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
+ D + +A+ + + LEK+ G + + YSA I A +G L EA
Sbjct: 432 NVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE-GYSANIDAYGERGYLSEA 490
Query: 244 FDLFL---EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+F+ E+ + V Y ++ AY + A L + M G PD
Sbjct: 491 ERVFICCQEVNKRTVIE----YNVMIKAYGISKSCEKACELFESMMSYGVTPD------- 539
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELK 360
T+N L+ L S + + L M E G D + Y V+ F ++ +L A E+
Sbjct: 540 -KCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 598
Query: 361 VEMDEKIIWLDEYTYESLMEGLSDE------VTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
EM E I D Y L+ +D ++Y + + GN L + T+
Sbjct: 599 KEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKV 658
Query: 415 GYLPDSVTL-GVFINGLNKKATTSI-AKGILLRMISSQCLTMPSYIIYDTLIENCSYVEF 472
GYL ++ + + NK + ++ + S + + + I+D++ + EF
Sbjct: 659 GYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF 718
Query: 473 KSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
A+ L + G EA ++M M + D YN ++ G +A E +KE
Sbjct: 719 TFAMMLCM-YKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKE 777
Query: 533 MVHYGFFPHMFSVLSL 548
MV G P + SL
Sbjct: 778 MVSSGIQPDDSTFKSL 793
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 136/309 (44%), Gaps = 26/309 (8%)
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
+KA ++F M++ G P TYN + S++ + M E G D + Y AV
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
IS F + G+L A E+ E VE I PD V Y LI A G++ +A ++E ++
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMS-YVEAMKEAG 640
Query: 256 SPSNST-YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P NS Y L+ Y VG A E +R L P + T N +I+
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEA-----EAIYRKLLQSCNKTQYPDVYTSNCMINLYSE 695
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
V +A I M + G + ++ +L + + ++A ++ +M E
Sbjct: 696 RSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMRE--------- 745
Query: 375 YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT---LGVFIN--G 429
M+ L+D ++Y+S+L + G ++ + +EM +G PD T LG + G
Sbjct: 746 ----MKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801
Query: 430 LNKKATTSI 438
++KKA I
Sbjct: 802 MSKKAVRKI 810
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 134/317 (42%), Gaps = 43/317 (13%)
Query: 12 RHMVRMNVMIRGFATESVMSCKEK-KVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAK 70
R ++ NVMI+ + SC++ ++ E+ + P ++ +++ L + + +
Sbjct: 503 RTVIEYNVMIKAYGISK--SCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGR 560
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ-------------------- 110
+ +M G DC Y A+I K+ + A E+Y +
Sbjct: 561 CYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAF 620
Query: 111 ---------------MRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIAS---GFL 151
M+ G+ N Y SLI L +LD+A ++ +++ S
Sbjct: 621 ADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY 680
Query: 152 PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI 211
P V T N I Y V +A IF +M +RG + + ++ ++ + ++G E+A +I
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQI 739
Query: 212 KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
+ E IL D ++Y++++ L G EA + F EM+ + P +ST+ L
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 272 VGEFSMAFHLHDEMRHR 288
+G A +E+R +
Sbjct: 800 LGMSKKAVRKIEEIRKK 816
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 139/337 (41%), Gaps = 56/337 (16%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELY- 108
++ + +IK + E+A E+ M G+ PD TYN L+ + +M Y
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASA-DMPHKGRCYL 563
Query: 109 DQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
++MR G + Y ++I + L+ A +V+ EM+ P V Y I A+ +
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
V+QA+ AM E G+ + V YN++I + + G L++A + Y
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEA---------------EAIY 668
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS------MAFHL 281
L+Q+ C + P DV SN C++ +S A +
Sbjct: 669 RKLLQS-CNKTQYP------------DVYTSN----------CMINLYSERSMVRKAEAI 705
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
D M+ RG +F + N R +EA I + M EM + D +SYN
Sbjct: 706 FDSMKQRGEANEFTFAMMLCMYKKNG---------RFEEATQIAKQMREMKILTDPLSYN 756
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
+VL F K+A E EM I D+ T++SL
Sbjct: 757 SVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 142/315 (45%), Gaps = 14/315 (4%)
Query: 75 EMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW 134
EM R+G +T+ +I + A+ + +M+ GL P+ T+ LI +LC
Sbjct: 703 EMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762
Query: 135 ---LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+++A + F EMI SGF+P ++ + A ++ + G P V+
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVA 821
Query: 192 YNAVISKFCQDGELEKAL-EIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
Y+ I C+ G+LE+AL E+ + E+ +L D TY +++ L +G L +A D M
Sbjct: 822 YSIYIRALCRIGKLEEALSELASFEGERSLL-DQYTYGSIVHGLLQRGDLQKALDKVNSM 880
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIH 310
P YT L+ + + +M PS+VT+ A+I
Sbjct: 881 KEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESC--------EPSVVTYTAMIC 932
Query: 311 GLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWL 370
G SL +V+EA R M E G SPD +Y+ + CQ + + A +L EM +K I
Sbjct: 933 GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAP 992
Query: 371 DEYTYESLMEGLSDE 385
+ ++ GL+ E
Sbjct: 993 STINFRTVFYGLNRE 1007
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/511 (21%), Positives = 201/511 (39%), Gaps = 80/511 (15%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
+F ++K C +++EA E++RE+ K + D + + L+ G+C+ M+ A+E+ D M
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM 390
Query: 112 RVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
+ R L + + + L + KA + F + SG P V+TY + + ++ E
Sbjct: 391 KRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFE 450
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
+ +F+ M E G+ PD V+ AV++ + +A ++ + EKGI P +YS +
Sbjct: 451 KGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFV 510
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG-- 289
+ LC E +F +M + + ++ ++ + GE HL E++ R
Sbjct: 511 KELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGE-KEKIHLIKEIQKRSNS 569
Query: 290 ----FLPDFVIQFS-----------PSLVTFNALIHGLCSLERVD--EALGILRGMPEMG 332
+FS P LV +AL L +++++D E +L +
Sbjct: 570 YCDELNGSGKAEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWE 629
Query: 333 LSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL 392
+ +A+ +TV F EL VE +L
Sbjct: 630 RTQEALEKSTVQF----------TPELVVE----------------------------VL 651
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
QGN F RNGY +S + I + + M CL
Sbjct: 652 RHAKIQGNAVLRF-FSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCL 710
Query: 453 -TMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
T ++ I ++ + GL N A + M +M + P + +
Sbjct: 711 ITQDTWAI------------------MIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFK 752
Query: 512 LLIFDHCRRG--NVNKAYEMYKEMVHYGFFP 540
LI C + NV +A ++EM+ GF P
Sbjct: 753 CLITVLCEKKGRNVEEATRTFREMIRSGFVP 783
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 114/268 (42%), Gaps = 12/268 (4%)
Query: 48 PYLVSFKGVIKELCEKE--RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
P +FK +I LCEK+ +EEA REM R G PD E + +C+V N A
Sbjct: 746 PSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAK 805
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
D + G P Y I LC L++A L TY +
Sbjct: 806 SCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGL 864
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
L +++AL ++M E G P + Y ++I F ++ +LEK LE + + P
Sbjct: 865 LQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSV 924
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+A+I G + EA++ F M SP TY++ + C + A L E
Sbjct: 925 VTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSE 984
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGL 312
M +G +PS + F + +GL
Sbjct: 985 MLDKG--------IAPSTINFRTVFYGL 1004
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P V++ I+ LC ++EEA + + D TY +++ G+ + ++ A++
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDK 876
Query: 108 YDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+ M+ G P Y SLI L+K + +M PSV TY I Y+S
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMS 936
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+VE+A F M ERG SPD +Y+ I+ CQ + E AL++ +E ++KGI P +
Sbjct: 937 LGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTIN 996
Query: 227 YSALIQALCLQG 238
+ + L +G
Sbjct: 997 FRTVFYGLNREG 1008
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 120/279 (43%), Gaps = 10/279 (3%)
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
V +M + G D YN +I +C A+E Y +M +G++ RTY L+D +
Sbjct: 246 VFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIA 305
Query: 132 -TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
+ +D + ++M+ + + + ++ S ++++AL + + + + D
Sbjct: 306 KSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAK 365
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+ ++ C+ + ALEI + +++ L D Y +I Q + +A + F +
Sbjct: 366 YFEILVKGLCRANRMVDALEI-VDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVI 424
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIH 310
+ P STYT +M + +F +L +EM G PD V A++
Sbjct: 425 KKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDS--------VAITAVVA 476
Query: 311 GLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ 349
G RV EA + M E G+ P SY+ + C+
Sbjct: 477 GHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCR 515
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 147/344 (42%), Gaps = 11/344 (3%)
Query: 62 EKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
E ++ E+V EM + G D T+ LI K + + + ++++MR G +
Sbjct: 201 EARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDAT 260
Query: 122 TYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
Y +I LC D A + + EM+ G + TY + SE+V+ I M
Sbjct: 261 AYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDM 320
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
+ ++ ++ FC G++++ALE+ E K + D + L++ LC +
Sbjct: 321 VRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 380
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+A ++ M R + SN Y ++ Y + S A + ++ G P
Sbjct: 381 VDALEIVDIMKRRKLDDSN-VYGIIISGYLRQNDVSKALEQFEVIKKSGR--------PP 431
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELK 360
+ T+ ++ L L++ ++ + M E G+ PD+V+ V+ G + +A+++
Sbjct: 432 RVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF 491
Query: 361 VEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
M+EK I +Y ++ L Y ++ F Q + K+
Sbjct: 492 SSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIK-IFNQMHASKI 534
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 128/296 (43%), Gaps = 24/296 (8%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
LD ++ +EM +G + T+ I+ Y ++++ + L +F M + G D +YN
Sbjct: 205 LDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNI 264
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+I C G + ALE E +EKGI TY L+ + + + +M+R
Sbjct: 265 MIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRIC 324
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
+ + L+ ++C+ G+ A L E++++ D F L+ GLC
Sbjct: 325 EISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLD--------AKYFEILVKGLCR 376
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
R+ +AL I+ M L D+ Y ++ G+ + ++ KA E + E+ +K
Sbjct: 377 ANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALE-QFEVIKK-------- 426
Query: 375 YESLMEGLSDEV-TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
G V TY+ ++ F +K L EM NG PDSV + + G
Sbjct: 427 -----SGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAG 477
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 142/356 (39%), Gaps = 35/356 (9%)
Query: 115 GLSPNERTY-MSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQA 173
G N Y MS+ C + +F EM G L + T+ I Y + A
Sbjct: 673 GYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIA 732
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDG--ELEKALEIKAETVEKGILPDDVTYSALI 231
+ F M + GL P ++ +I+ C+ +E+A E + G +PD +
Sbjct: 733 IRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYL 792
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF-HLHDEMRHRGF 290
LC G+ +A L+ L P Y+ + A C +G+ A L R
Sbjct: 793 GCLCEVGNTKDAKSC-LDSLGKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSL 851
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
L + T+ +++HGL + +AL + M E+G P Y +++ F +
Sbjct: 852 LDQY---------TYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKE 902
Query: 351 RELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDE---VTYSSLLNDYFAQGNMQKVFKL 407
++L+K E +M EG S E VTY++++ Y + G +++ +
Sbjct: 903 KQLEKVLETCQKM----------------EGESCEPSVVTYTAMICGYMSLGKVEEAWNA 946
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTL 463
R M G PD T FIN L + + A +L M+ PS I + T+
Sbjct: 947 FRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKG--IAPSTINFRTV 1000
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 143/391 (36%), Gaps = 48/391 (12%)
Query: 174 LGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ 232
L FS + +R G + +YN I + ++ + E +G L T++ +I
Sbjct: 662 LRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIM 721
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL-----VGEFSMAFHLHDEMRH 287
G A F EM + PS+ST+ L+ C V E + F EM
Sbjct: 722 QYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR---EMIR 778
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
GF+PD + + LC + +A L + ++G P V+Y+ +
Sbjct: 779 SGFVPDREL--------VQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRAL 829
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKL 407
C+I +L++A + + LD+YTY S++ GL +G++QK
Sbjct: 830 CRIGKLEEALSELASFEGERSLLDQYTYGSIVHGL-------------LQRGDLQKALDK 876
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENC 467
M G P I K+ +M C PS + Y +I C
Sbjct: 877 VNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESC--EPSVVTYTAMI--C 932
Query: 468 SYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAY 527
Y+ G V EA A M PD Y+ I C+ A
Sbjct: 933 GYMSL-------------GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDAL 979
Query: 528 EMYKEMVHYGFFPHMFSVLSLIHALYYDRKN 558
++ EM+ G P + ++ + L + K+
Sbjct: 980 KLLSEMLDKGIAPSTINFRTVFYGLNREGKH 1010
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 199/463 (42%), Gaps = 64/463 (13%)
Query: 32 CKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNAL 91
C+ K G F L +IK L +M +A+ +R M GL+ + YN +
Sbjct: 785 CRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVM 844
Query: 92 ICGMCK---------------VRNMLCAVELYDQ-MRVRGLSPNERTYMSLIDLLC---- 131
G CK +N++C+V+ Y + +R L P + +SL + L
Sbjct: 845 FQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGES 904
Query: 132 -----------TWWLDKAY------KVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
+++ +A KV EM G LP T+N + Y SS +L
Sbjct: 905 NPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSL 964
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI-LPDDVTYSALIQA 233
SAM +G+ P+ S AV S C +G+++KAL++ KG L V + +++
Sbjct: 965 RYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVET 1024
Query: 234 LCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
L +G +P+A D + R + N Y ++ G +A HL + M
Sbjct: 1025 LISKGEIPKAEDFLTRVTRNGMMAPN--YDNIIKKLSDRGNLDIAVHLLNTMLKN----- 1077
Query: 294 FVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
Q P +++++I+GL ++D+A+ M E+GLSP +++ ++ FC+ ++
Sbjct: 1078 ---QSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQV 1134
Query: 354 KKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
++ L M L E S E+ + ++++ + + N K ++ M +
Sbjct: 1135 LESERLIKSM------------VGLGESPSQEM-FKTVIDRFRVEKNTVKASEMMEMMQK 1181
Query: 414 NGYLPDSVTLGVFINGLN---KKATTSIAKGILLRMISSQCLT 453
GY D T I+ ++ +K TT+ +G L R++S T
Sbjct: 1182 CGYEVDFETHWSLISNMSSSKEKKTTTAGEGFLSRLLSGNGFT 1224
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 189/479 (39%), Gaps = 57/479 (11%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A VV+ + +G + E YN LI G+C + A + D+M + P+ + + LI
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIP 782
Query: 129 LLCTWWLDKAYKVFN--EMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
LC +KA FN E I S ++ + I + ++ A M GLS
Sbjct: 783 RLCR--ANKAGTAFNLAEQIDSSYV-----HYALIKGLSLAGKMLDAENQLRIMLSNGLS 835
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
YN + +C+ K E+ V K I+ +Y ++ +CL+ A L
Sbjct: 836 SYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISL 895
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD-----EMRHRGFLPDFVIQFSPS 301
+L G+ +P ++ Y F HL EM+ RG LPD
Sbjct: 896 KEFLLLGESNPGGVIIYNMLIFYM----FRAKNHLEVNKVLLEMQGRGVLPD-------- 943
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
TFN L+HG S +L L M G+ P+ S V C ++KKA +L
Sbjct: 944 ETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQ 1003
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
M+ K W L V + ++ ++G + K +TRNG + +
Sbjct: 1004 VMESK-GW-----------NLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNY 1051
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKD 481
I L+ + IA +L M+ +Q ++P YD++I GL++
Sbjct: 1052 D--NIIKKLSDRGNLDIAVHLLNTMLKNQ--SIPGSSSYDSVIN-----------GLLR- 1095
Query: 482 FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
+++A H M + + P + ++ L+ C V ++ + K MV G P
Sbjct: 1096 ---YNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESP 1151
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/500 (21%), Positives = 188/500 (37%), Gaps = 72/500 (14%)
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVEL---YDQMRVRGLSPNERTYMSLIDLLCT 132
M RKGL P Y LI + +V A + + + R N + +I+LLC
Sbjct: 209 MRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLC- 267
Query: 133 WWLDK----AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
LD+ A + +++A G + + + Y+K Y + E L S + E PD
Sbjct: 268 --LDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLL---SFIGEVKYEPD 322
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
+ N ++ C+ E+A E G D+VT+ LI C +G + A
Sbjct: 323 VFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLS 382
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNAL 308
E++ P +Y ++ G + + DEM+ G + SL TF +
Sbjct: 383 EIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMM--------LSLSTFKIM 434
Query: 309 IHGLCSLERVDEALGILRGMPEMGL-----SPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+ G C + +EA I+ M GL D +S L GF + A LK +
Sbjct: 435 VTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPL-----AVRLKRDN 489
Query: 364 DEKI--------------IWLDEYTYESLMEGLSDEVT---YSSLLNDYFAQGNMQKVFK 406
D + D YE + + D ++SL+ G++Q +
Sbjct: 490 DSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALR 549
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
L EM R G K + S A +L+R S C + + +L+E
Sbjct: 550 LLDEMARWG---------------QKLSRRSFA--VLMR---SLCASRAHLRVSISLLEK 589
Query: 467 CSYVEFK----SAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGN 522
+ ++ + LV+++ +G + + +M M D Y LI C++
Sbjct: 590 WPKLAYQLDGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKET 649
Query: 523 VNKAYEMYKEMVHYGFFPHM 542
+N ++ + + P +
Sbjct: 650 LNDLLNVWGAAQNDNWLPDL 669
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 120/524 (22%), Positives = 201/524 (38%), Gaps = 67/524 (12%)
Query: 42 GLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNM 101
G ++ EP + ++ LC + E A + E+ G D T+ LI C ++
Sbjct: 315 GEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDI 374
Query: 102 LCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKF 160
AV ++ +G P+ +Y +++ L L + + +EM +G + S++T+
Sbjct: 375 KRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIM 434
Query: 161 ITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE---TVE 217
+T Y + + E+A I + M GL + + F G A+ +K + T
Sbjct: 435 VTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFS 494
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEM-LRGDVSPSNSTYTRLMYAYCLVGEFS 276
K DD L L L L +A++ + M L V P + L+ G+
Sbjct: 495 KAEFFDD-----LGNGLYLHTDL-DAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQ 545
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC-SLERVDEALGILRGMPEMGLSP 335
A L DEM G S +F L+ LC S + ++ +L P++
Sbjct: 546 TALRLLDEMARWG--------QKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQL 597
Query: 336 DAVSYNTVLFGFCQ---IRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL 392
D + N ++ +C+ R K + V+M I D TY SL+ + T + LL
Sbjct: 598 DGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPI---DNVTYTSLIRCFCKKETLNDLL 654
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
N + A N + +LPD G N L +K + R+ S L
Sbjct: 655 NVWGAAQN-------------DNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPL 701
Query: 453 TMPSYIIYDTLIENCS-YVEFKSAVGLVKDFSTRGLVNEAAIAH---ERMHNMSVKPDGA 508
+ E C +VE + +G + IAH +R+ +
Sbjct: 702 SQS---------EACRIFVEKLTVLGF------------SCIAHSVVKRLEGEGCIVEQE 740
Query: 509 VYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
VYN LI C + A+ + EM+ P + S L LI L
Sbjct: 741 VYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRL 784
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 128/292 (43%), Gaps = 21/292 (7%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKG---LAPDCETYNALICGMCKVRNMLCAVEL 107
SF ++ LCE + + EA+E+ N G + + +N ++ G K+ E
Sbjct: 152 TSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEY 211
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCT----WWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+ +M G++ + +Y +D++C W KA K++ EM + V YN I A
Sbjct: 212 WKKMDTEGVTKDLFSYSIYMDIMCKSGKPW---KAVKLYKEMKSRRMKLDVVAYNTVIRA 268
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+S+ VE + +F M ERG P++ ++N +I C+DG + A + E ++G PD
Sbjct: 269 IGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPD 328
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+TY L L E LF M+R V P TY LM + G ++
Sbjct: 329 SITYMCLFSRL---EKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWK 385
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
M+ G PD +NA+I L +D A M E GLSP
Sbjct: 386 TMKESGDTPD--------SAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 9/213 (4%)
Query: 11 FRHMVRMNVMIR-GFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEA 69
F + + M++M + G ++V KE K RM+ +V++ VI+ + + +E
Sbjct: 225 FSYSIYMDIMCKSGKPWKAVKLYKEMKS------RRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 70 KEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL 129
V REM +G P+ T+N +I +C+ M A + D+M RG P+ TYM L
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSR 338
Query: 130 LCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
L + +F MI SG P + TY + + ++ L ++ M E G +PD
Sbjct: 339 LEK--PSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDS 396
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+YNAVI Q G L+ A E + E +E+G+ P
Sbjct: 397 AAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 119/243 (48%), Gaps = 9/243 (3%)
Query: 18 NVMIRGFATESVMS-CKE-KKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVRE 75
N+++RG++ CKE K +T G+ + L S+ + +C+ + +A ++ +E
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKD---LFSYSIYMDIMCKSGKPWKAVKLYKE 249
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWW 134
M + + D YN +I + + + + ++ +MR RG PN T+ ++I LLC
Sbjct: 250 MKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 309
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+ AY++ +EM G P TY + + E+ + L +F M G+ P + +Y
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITY---MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVM 366
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
++ KF + G L+ L + E G PD Y+A+I AL +G L A + EM+
Sbjct: 367 LMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
Query: 255 VSP 257
+SP
Sbjct: 427 LSP 429
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 157/377 (41%), Gaps = 34/377 (9%)
Query: 96 CKVRNMLCAVELYDQM-RVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIA-SGFLP 152
C + A+E ++ + R G T+ +ID+L ++ + ++ + N MI + +P
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVP 115
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI- 211
+ T+ Y+++ V++A+ + + + L + YN ++ C+ + +A E+
Sbjct: 116 NHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELC 174
Query: 212 -KAETVEKGI-LPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAY 269
+ G + + ++ +++ G + + + +M V+ +Y+ M
Sbjct: 175 FGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIM 234
Query: 270 CLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMP 329
C G+ A L+ EM+ R D +V +N +I + + + V+ + + R M
Sbjct: 235 CKSGKPWKAVKLYKEMKSRRMKLD--------VVAYNTVIRAIGASQGVEFGIRVFREMR 286
Query: 330 EMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV--- 386
E G P+ ++NT++ C+ ++ AY + EM ++ D TY L L
Sbjct: 287 ERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEIL 346
Query: 387 ----------------TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL 430
TY L+ + G +Q V + + M +G PDS I+ L
Sbjct: 347 SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDAL 406
Query: 431 NKKATTSIAKGILLRMI 447
+K +A+ MI
Sbjct: 407 IQKGMLDMAREYEEEMI 423
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 134/296 (45%), Gaps = 12/296 (4%)
Query: 56 VIKELCEKERMEEAK---EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
++ LC++ + EA E + P +N L+ G + R + A +L+++M+
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 113 VRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
+ P TY +LI+ C + A +V EM + + +N I + R+
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
+ALG+ P +V+YN+++ FC+ G+L A +I + +G+ P TY+
Sbjct: 338 EALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFF 397
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
+ E +L+ +++ SP TY ++ C G+ S+A ++ EM++RG
Sbjct: 398 KYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGID 457
Query: 292 PDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
PD L+T LIH LC LE ++EA G+ P +++ + G
Sbjct: 458 PD--------LLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL 505
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 122/246 (49%), Gaps = 2/246 (0%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
N+++ G+ + EK + E + ++P +V++ +I+ C R++ A EV+ EM
Sbjct: 254 NILLNGWFRSRKLKQAEK-LWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMK 312
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LD 136
+ + +N +I G+ + + A+ + ++ V P TY SL+ C L
Sbjct: 313 MAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLP 372
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A K+ M+ G P+ TYN F + + E+ + ++ + E G SPD ++Y+ ++
Sbjct: 373 GASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLIL 432
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
C+DG+L A+++ E +GI PD +T + LI LC L EAF+ F +R +
Sbjct: 433 KMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGII 492
Query: 257 PSNSTY 262
P T+
Sbjct: 493 PQYITF 498
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 137/320 (42%), Gaps = 27/320 (8%)
Query: 126 LIDLLCTWWLDKAYKVFNEMIA----SGFLPSVATYNKFITAYLSSERVEQALGIFSAMA 181
L+D LC + ++ E I S ++PSV +N + + S +++QA ++ M
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 182 ERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLP 241
+ P +V+Y +I +C+ ++ A+E+ E + + + ++ +I L G L
Sbjct: 278 AMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLS 337
Query: 242 EAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
EA + + P+ TY L+ +C G+ A + M RG P+
Sbjct: 338 EALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGV--------DPT 389
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
T+N + +E + + + E G SPD ++Y+ +L C+ +L A ++
Sbjct: 390 TTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNK 449
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM-QKVFKLEREMTRNGYLPDS 420
EM + G+ ++ +++L + M ++ F+ R G +P
Sbjct: 450 EMKNR--------------GIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQY 495
Query: 421 VTLGVFINGLNKKATTSIAK 440
+T + NGL K + +AK
Sbjct: 496 ITFKMIDNGLRSKGMSDMAK 515
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 1/204 (0%)
Query: 36 KVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGM 95
+V E + ME + F +I L E R+ EA ++ P TYN+L+
Sbjct: 306 EVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNF 365
Query: 96 CKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSV 154
CK ++ A ++ M RG+ P TY ++ ++ ++I +G P
Sbjct: 366 CKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDR 425
Query: 155 ATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
TY+ + ++ A+ + M RG+ PDL++ +I C+ LE+A E
Sbjct: 426 LTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDN 485
Query: 215 TVEKGILPDDVTYSALIQALCLQG 238
V +GI+P +T+ + L +G
Sbjct: 486 AVRRGIIPQYITFKMIDNGLRSKG 509
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 166/423 (39%), Gaps = 52/423 (12%)
Query: 148 SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELE 206
+G PSV + SS + ++ ++ M LSP L +++V++ C+ E E
Sbjct: 95 TGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSL--FDSVVNSLCKAREFE 152
Query: 207 KALEI---KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYT 263
A + + + E L T+ LI+ G + +A F E R P + T
Sbjct: 153 IAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAF-EFARS-YEPVCKSAT 210
Query: 264 RLMYAYCLVGEFSMAFHLHDE---MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
L L+ H+ + + G D + PS+ FN L++G ++ +
Sbjct: 211 ELRLLEVLLDALCKEGHVREASMYLERIGGTMDS--NWVPSVRIFNILLNGWFRSRKLKQ 268
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
A + M M + P V+Y T++ G+C++R ++ A E+ EM + ++ + +++
Sbjct: 269 AEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID 328
Query: 381 GLSDE----------------------VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLP 418
GL + VTY+SL+ ++ G++ K+ + M G P
Sbjct: 329 GLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDP 388
Query: 419 DSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGL 478
+ T F +K T + ++I + P + Y ++
Sbjct: 389 TTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG--HSPDRLTYHLIL-------------- 432
Query: 479 VKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
K G ++ A ++ M N + PD +LI CR + +A+E + V G
Sbjct: 433 -KMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGI 491
Query: 539 FPH 541
P
Sbjct: 492 IPQ 494
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 165/419 (39%), Gaps = 48/419 (11%)
Query: 161 ITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI 220
I+ L + V + SA+ E G+ P + +A+ + L ++ K ++ G
Sbjct: 73 ISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSV-FKWAEMKPGF 131
Query: 221 LPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP---SNSTYTRLMYAYCLVGEFSM 277
+ +++ +LC A+ L + +R D S T+ L+ Y G
Sbjct: 132 TLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQ 191
Query: 278 AFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA---LGILRGMPEMGLS 334
A + R + P V + + L L+ LC V EA L + G +
Sbjct: 192 AIRAFEFAR--SYEP--VCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWV 247
Query: 335 PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLND 394
P +N +L G+ + R+LK+A +L EM M VTY +L+
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEM-------------KAMNVKPTVVTYGTLIEG 294
Query: 395 YFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTM 454
Y +Q ++ EM + + I+GL + S A G++ R C +
Sbjct: 295 YCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFV--CESG 352
Query: 455 PSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERM------HNMSVK--- 504
P+ + Y++L++N C + A ++K TRG V+ + HN + +
Sbjct: 353 PTIVTYNSLVKNFCKAGDLPGASKILKMMMTRG-VDPTTTTYNHFFKYFSKHNKTEEGMN 411
Query: 505 -----------PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHAL 552
PD Y+L++ C G ++ A ++ KEM + G P + + LIH L
Sbjct: 412 LYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 470
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 57/347 (16%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
AV ++D++ GL N + L+D LC + +V + S P+ T+N FI
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHG 233
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + RVE+AL M G P ++SY +I +CQ E K E+ +E G P+
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+TY+ ++ +L Q EA + M R P + Y
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY--------------------- 332
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILR-GMPEMGLSPDAVSYNT 342
N LIH L R++EA + R MPE+G+S + +YN+
Sbjct: 333 ----------------------NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNS 370
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ +C E KA EL EM ES D TY LL F +G++
Sbjct: 371 MIAMYCHHDEEDKAIELLKEM------------ESSNLCNPDVHTYQPLLRSCFKRGDVV 418
Query: 403 KVFKLEREMTRNGYLP-DSVTLGVFINGLNKKATTSIAKGILLRMIS 448
+V KL +EM +L D T I L + A + MIS
Sbjct: 419 EVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 9/270 (3%)
Query: 32 CKEKKVGETFGLL-----RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCE 86
CKEK+V + +L + P +F I C+ R+EEA ++EM G P
Sbjct: 201 CKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL-CTWWLDKAYKVFNEM 145
+Y +I C+ + E+ +M G PN TY +++ L ++A +V M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSA-MAERGLSPDLVSYNAVISKFCQDGE 204
SG P YN I + R+E+A +F M E G+S + +YN++I+ +C E
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 205 LEKALEIKAETVEKGIL-PDDVTYSALIQALCLQGSLPEAFDLFLEML-RGDVSPSNSTY 262
+KA+E+ E + PD TY L+++ +G + E L EM+ + +S STY
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 263 TRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
T L+ C A+ L +EM + P
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 17/309 (5%)
Query: 34 EKKVG--ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNAL 91
E+ VG + G +E S ++ LC+++R+E+A+ V+ ++ + + P+ T+N
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIF 230
Query: 92 ICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGF 150
I G CK + A+ +M+ G P +Y ++I C + K Y++ +EM A+G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 151 LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE 210
P+ TY +++ + + E+AL + + M G PD + YN +I + G LE+A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 211 I-KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV-SPSNSTYTRLMYA 268
+ + E E G+ + TY+++I C +A +L EM ++ +P TY L+ +
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS 410
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSL--VTFNALIHGLCSLERVDEALGILR 326
F D + L + V + SL T+ LI LC + A +
Sbjct: 411 ---------CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 327 GMPEMGLSP 335
M ++P
Sbjct: 462 EMISQDITP 470
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 126/300 (42%), Gaps = 11/300 (3%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
EEA + + GL + E+ N L+ +CK + + A + Q++ ++PN T+
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIF 230
Query: 127 IDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
I C +++A EM GF P V +Y I Y + + S M G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
P+ ++Y ++S E E+AL + G PD + Y+ LI L G L EA
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 246 LF-LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+F +EM VS + STY ++ YC E A L EM +P + T
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC-------NPDVHT 403
Query: 305 FNALIHGLCSLERVDEALGILRGM-PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+ L+ V E +L+ M + LS D +Y ++ C+ + AY L EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 138/352 (39%), Gaps = 64/352 (18%)
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM--------------------- 285
F+E +RGD + +T ++M + GE+ A + D +
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 286 -----RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSY 340
+ R L +P+ TFN IHG C RV+EAL ++ M G P +SY
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 341 NTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGN 400
T++ +CQ E K YE+ EM+ + +TY+++++ AQ
Sbjct: 263 TTIIRCYCQQFEFIKVYEMLSEMEAN-------------GSPPNSITYTTIMSSLNAQKE 309
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIY 460
++ ++ M R+G PDS+ I+ L + A+ + + +++ +
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 461 DTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERM---------------------- 498
+ C + E A+ L+K+ + L N ++ +
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 499 -HNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
H++S+ D + Y LI CR AY +++EM+ P + L L+
Sbjct: 430 KHHLSL--DESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 140/347 (40%), Gaps = 57/347 (16%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
AV ++D++ GL N + L+D LC + +V + S P+ T+N FI
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHG 233
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + RVE+AL M G P ++SY +I +CQ E K E+ +E G P+
Sbjct: 234 WCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+TY+ ++ +L Q EA + M R P + Y
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY--------------------- 332
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILR-GMPEMGLSPDAVSYNT 342
N LIH L R++EA + R MPE+G+S + +YN+
Sbjct: 333 ----------------------NCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNS 370
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ +C E KA EL EM ES D TY LL F +G++
Sbjct: 371 MIAMYCHHDEEDKAIELLKEM------------ESSNLCNPDVHTYQPLLRSCFKRGDVV 418
Query: 403 KVFKLEREMTRNGYLP-DSVTLGVFINGLNKKATTSIAKGILLRMIS 448
+V KL +EM +L D T I L + A + MIS
Sbjct: 419 EVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMIS 465
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 9/270 (3%)
Query: 32 CKEKKVGETFGLL-----RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCE 86
CKEK+V + +L + P +F I C+ R+EEA ++EM G P
Sbjct: 201 CKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL-CTWWLDKAYKVFNEM 145
+Y +I C+ + E+ +M G PN TY +++ L ++A +V M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSA-MAERGLSPDLVSYNAVISKFCQDGE 204
SG P YN I + R+E+A +F M E G+S + +YN++I+ +C E
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 205 LEKALEIKAETVEKGIL-PDDVTYSALIQALCLQGSLPEAFDLFLEML-RGDVSPSNSTY 262
+KA+E+ E + PD TY L+++ +G + E L EM+ + +S STY
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 263 TRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
T L+ C A+ L +EM + P
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITP 470
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 143/309 (46%), Gaps = 17/309 (5%)
Query: 34 EKKVG--ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNAL 91
E+ VG + G +E S ++ LC+++R+E+A+ V+ ++ + + P+ T+N
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIF 230
Query: 92 ICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGF 150
I G CK + A+ +M+ G P +Y ++I C + K Y++ +EM A+G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 151 LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE 210
P+ TY +++ + + E+AL + + M G PD + YN +I + G LE+A
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 211 I-KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV-SPSNSTYTRLMYA 268
+ + E E G+ + TY+++I C +A +L EM ++ +P TY L+ +
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRS 410
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSL--VTFNALIHGLCSLERVDEALGILR 326
F D + L + V + SL T+ LI LC + A +
Sbjct: 411 ---------CFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFE 461
Query: 327 GMPEMGLSP 335
M ++P
Sbjct: 462 EMISQDITP 470
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 126/300 (42%), Gaps = 11/300 (3%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
EEA + + GL + E+ N L+ +CK + + A + Q++ ++PN T+
Sbjct: 172 EEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIF 230
Query: 127 IDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
I C +++A EM GF P V +Y I Y + + S M G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
P+ ++Y ++S E E+AL + G PD + Y+ LI L G L EA
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 246 LF-LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+F +EM VS + STY ++ YC E A L EM +P + T
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLC-------NPDVHT 403
Query: 305 FNALIHGLCSLERVDEALGILRGM-PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+ L+ V E +L+ M + LS D +Y ++ C+ + AY L EM
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEM 463
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 138/352 (39%), Gaps = 64/352 (18%)
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM--------------------- 285
F+E +RGD + +T ++M + GE+ A + D +
Sbjct: 143 FVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCK 202
Query: 286 -----RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSY 340
+ R L +P+ TFN IHG C RV+EAL ++ M G P +SY
Sbjct: 203 EKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISY 262
Query: 341 NTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGN 400
T++ +CQ E K YE+ EM+ + +TY+++++ AQ
Sbjct: 263 TTIIRCYCQQFEFIKVYEMLSEMEAN-------------GSPPNSITYTTIMSSLNAQKE 309
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIY 460
++ ++ M R+G PDS+ I+ L + A+ + + +++ +
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 461 DTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERM---------------------- 498
+ C + E A+ L+K+ + L N ++ +
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 499 -HNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
H++S+ D + Y LI CR AY +++EM+ P + L L+
Sbjct: 430 KHHLSL--DESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLL 479
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 2/228 (0%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL-YDQMRVRGLSPNERTYMS 125
++A ++ EM +K + P T+ LI G+CK + A+++ +D ++V G+ P Y S
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 126 LIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
LI LC L A+K+ +E A Y+ I++ + + R + I M+E+G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
PD V+YN +I+ FC + + E A + E VEKG+ PD ++Y+ ++ EA
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEAT 348
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
LF +M R SP +Y + C +F A + DEM +G+ P
Sbjct: 349 YLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKP 396
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 144/316 (45%), Gaps = 26/316 (8%)
Query: 118 PNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGI 176
P E + ++I+ L +A +F+EM +V + N ++A L +E+
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCL 236
S++ E G PD +YN +I Q G + AL++ E V+K + P VT+ LI LC
Sbjct: 141 LSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 237 QGSLPEAFDLFLEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
+ EA + +ML+ V P+ Y L+ A C +GE S AF L DE D
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAA 259
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
I ++ LI L R +E IL M E G PD V+YN ++ GFC + +
Sbjct: 260 I--------YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSES 311
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
A + EM EK GL D ++Y+ +L +F ++ L +M R
Sbjct: 312 ANRVLDEMVEK--------------GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRR 357
Query: 415 GYLPDSVTLGVFINGL 430
G PD+++ + +GL
Sbjct: 358 GCSPDTLSYRIVFDGL 373
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 152 PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI 211
P TYN I S + AL +F M ++ + P V++ +I C+D +++AL++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 212 KAETVE-KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
K + ++ G+ P Y++LI+ALC G L AF L E G + + Y+ L+ +
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 271 LVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPE 330
G + + +EM +G PD VT+N LI+G C + A +L M E
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPD--------TVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 331 MGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSS 390
GL PD +SYN +L F +I++ ++A L +M + D +Y + +GL + + +
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 391 ---LLNDYFAQGNMQKVFKLE 408
+L++ +G + +LE
Sbjct: 382 AAVILDEMLFKGYKPRRDRLE 402
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 114/248 (45%), Gaps = 10/248 (4%)
Query: 118 PNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGI 176
P+ TY LI + D A K+F+EM+ P+ T+ I RV++AL +
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 177 FSAMAE-RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
M + G+ P + Y ++I CQ GEL A ++K E E I D YS LI +L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
G E + EM P TY L+ +C+ + A + DEM +G PD
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD-- 327
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
++++N ++ +++ +EA + MP G SPD +SY V G C+ + ++
Sbjct: 328 ------VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 356 AYELKVEM 363
A + EM
Sbjct: 382 AAVILDEM 389
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 3/251 (1%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNR-KGLAPDCETYNALICGMCKVRNMLC 103
+++P V+F +I LC+ R++EA ++ +M + G+ P Y +LI +C++ +
Sbjct: 182 KVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSF 241
Query: 104 AVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A +L D+ + + Y +LI L+ ++ + EM G P TYN I
Sbjct: 242 AFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLIN 301
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
+ E A + M E+GL PD++SYN ++ F + + E+A + + +G P
Sbjct: 302 GFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSP 361
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
D ++Y + LC EA + EML P + C G+ + +
Sbjct: 362 DTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVI 421
Query: 283 DEMRHRGFLPD 293
+ HRG D
Sbjct: 422 SSL-HRGIAGD 431
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 14/295 (4%)
Query: 62 EKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
E E+M+E + E + PD TYN LI G + A++L+D+M + + P
Sbjct: 133 ELEKMKERLSSIDEFGK----PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 122 TYMSLIDLLCT-WWLDKAYKVFNEMIAS-GFLPSVATYNKFITAYLSSERVEQALGIFSA 179
T+ +LI LC + +A K+ ++M+ G P+V Y I A + A +
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGS 239
E + D Y+ +IS + G + I E EKG PD VTY+ LI C++
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND 308
Query: 240 LPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFS 299
A + EM+ + P +Y ++ + + ++ A +L ++M RG S
Sbjct: 309 SESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGC--------S 360
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELK 354
P +++ + GLC + +EA IL M G P L C+ +L+
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE 415
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 147/364 (40%), Gaps = 47/364 (12%)
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P TY L++ G F A L DEM + + P+ VTF LIHGLC
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKK--------KVKPTGVTFGTLIHGLCKDS 201
Query: 317 RVDEALGILRGMPEM-GLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
RV EAL + M ++ G+ P Y +++ CQI EL A++LK E E I +D
Sbjct: 202 RVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA--- 258
Query: 376 ESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT 435
YS+L++ G +V + EM+ G PD+VT V ING +
Sbjct: 259 ----------AIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND 308
Query: 436 TSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
+ A +L M+ P I Y+ ++ V F+ +K + EA
Sbjct: 309 SESANRVLDEMVEKG--LKPDVISYNMILG----VFFR-----IKKW------EEATYLF 351
Query: 496 ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
E M PD Y ++ C +A + EM+ G+ P + + L
Sbjct: 352 EDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCES 411
Query: 556 RKNSEMGWVIRNTLRSCNLNDSELHQVLNEIEVKKC----KIDALLNALAKIAVDGMLLD 611
K + VI + R D+++ V+ K+ ID LLN + + DG L
Sbjct: 412 GKLEILSKVISSLHRGIA-GDADVWSVMIPTMCKEPVISDSIDLLLNTVKE---DGPLSA 467
Query: 612 RGKC 615
+C
Sbjct: 468 MPQC 471
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 105/244 (43%), Gaps = 10/244 (4%)
Query: 7 TLKSFRHMVRMNVMIRG--FATESVMSCKEKKVGETFGLLR-------MEPYLVSFKGVI 57
LK F MV+ V G F T CK+ +V E + + P + + +I
Sbjct: 171 ALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI 230
Query: 58 KELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLS 117
K LC+ + A ++ E + D Y+ LI + K + ++M +G
Sbjct: 231 KALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCK 290
Query: 118 PNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGI 176
P+ TY LI+ C + A +V +EM+ G P V +YN + + ++ E+A +
Sbjct: 291 PDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYL 350
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCL 236
F M RG SPD +SY V C+ + E+A I E + KG P +Q LC
Sbjct: 351 FEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCE 410
Query: 237 QGSL 240
G L
Sbjct: 411 SGKL 414
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 90/229 (39%), Gaps = 28/229 (12%)
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSV 421
+M E++ +DE+ G D TY+ L++ G KL EM + P V
Sbjct: 136 KMKERLSSIDEF-------GKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 422 TLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVK 480
T G I+GL K + A + M+ + P+ IY +LI+ C E A L
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVR-PTVHIYASLIKALCQIGELSFAFKLKD 247
Query: 481 D------------FST-------RGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRG 521
+ +ST G NE ++ E M KPD YN+LI C
Sbjct: 248 EAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEN 307
Query: 522 NVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLR 570
+ A + EMV G P + S ++ + +K E ++ + R
Sbjct: 308 DSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPR 356
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 118/574 (20%), Positives = 233/574 (40%), Gaps = 84/574 (14%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
V+F +I + EA+ ++++M KG++PD +TYN L+ ++ A+E Y +
Sbjct: 341 VTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRK 400
Query: 111 MRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
+R GL P+ T+ +++ +LC + + V EM + + + Y++
Sbjct: 401 IRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGL 460
Query: 170 VEQALGIF------------------SAMAERGL-----------------SPDLVSYNA 194
V QA +F AE+GL D++ YN
Sbjct: 461 VVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNV 520
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+I + + EKAL + +G PD+ TY++L Q L + EA + EML
Sbjct: 521 MIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG 580
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
P TY ++ +Y +G S A L++ M G P+ V+ + +LI+G
Sbjct: 581 CKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVV--------YGSLINGFAE 632
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI---RELKKAYE------------- 358
V+EA+ R M E G+ + + +++ + ++ E ++ Y+
Sbjct: 633 SGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAA 692
Query: 359 ----LKVEMDEKIIWLDEYTYESLME-GLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
L + D I+ E + +L E G D +++++++ Y G + + ++ EM
Sbjct: 693 SNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 414 NGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTL--------IE 465
+G L D + + S + M+ + L + + + TL +
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLL-DWGTFKTLFTLLKKGGVP 811
Query: 466 NCSYVEFKSAVGLVKD----------FSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIF 515
+ + + ++A K FS GL A + + + + + + YN +I+
Sbjct: 812 SEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIY 871
Query: 516 DHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
+ G+++ A + Y M G P + + L+
Sbjct: 872 TYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLV 905
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 180/440 (40%), Gaps = 50/440 (11%)
Query: 122 TYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
T+ +LIDL L+ A +F+EM+ SG T+N I + + +A + M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
E+G+SPD +YN ++S G++E ALE + + G+ PD VT+ A++ LC + +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
E + EM R + + +M Y G A L + F D V+
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFER-----FQLDCVL---- 477
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEM-GLSPDAVSYNTVLFGFCQIRELKKAYEL 359
S T A+I EA + G M G D + YN ++ + + + +KA L
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 360 KVEMDEKIIWLDEYTYESLMEGLS-----DEV-----------------TYSSLLNDYFA 397
M + W DE TY SL + L+ DE TY++++ Y
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSY 457
G + L M + G P+ V G ING + A RM+ + ++
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ-YFRMMEEHGV-QSNH 655
Query: 458 IIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDH 517
I+ +LI K +S G + EA +++M + PD A N ++
Sbjct: 656 IVLTSLI---------------KAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLC 700
Query: 518 CRRGNVNKAYEMYKEMVHYG 537
G V++A ++ + G
Sbjct: 701 ADLGIVSEAESIFNALREKG 720
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 189/503 (37%), Gaps = 103/503 (20%)
Query: 144 EMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
EM +G LP+ TY + Y + V++AL M +R PD V+ V+ F G
Sbjct: 170 EMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSG 229
Query: 204 ELEKA-----------LEIKAETVE----KGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
E ++A +++ ++++ G V + + + L
Sbjct: 230 EFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSL 289
Query: 249 EMLRG-DVSPS----NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
G D SP ST+ L+ Y G + A +L EM G D V
Sbjct: 290 HFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPID--------TV 341
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN---------------------- 341
TFN +IH + + EA +L+ M E G+SPD +YN
Sbjct: 342 TFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKI 401
Query: 342 -------------TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM-----EGLS 383
VL CQ + + + + EMD I +DE++ +M EGL
Sbjct: 402 RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLV 461
Query: 384 ----------------DEVTYSSLLNDYFAQG---NMQKVFKLEREMT--RNGYLPDSVT 422
T +++++ Y +G + VF +R M+ RN L +V
Sbjct: 462 VQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVM 521
Query: 423 LGVFINGLNKKATTSIAKGI--------------LLRMISSQCLTMPSYIIYDTLIENCS 468
+ + + S+ KG+ L +M++ L + I ++++
Sbjct: 522 IKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGC 581
Query: 469 YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYE 528
K+ ++ + GL+++A +E M VKP+ VY LI G V +A +
Sbjct: 582 KPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQ 641
Query: 529 MYKEMVHYGFFPHMFSVLSLIHA 551
++ M +G + + SLI A
Sbjct: 642 YFRMMEEHGVQSNHIVLTSLIKA 664
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 179/443 (40%), Gaps = 51/443 (11%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRME--PYLVSFKGVIKELCEKERMEEAKEVVRE 75
NVMI+ + + EK + G+ P ++ + + L + ++EA+ ++ E
Sbjct: 519 NVMIKAYGKAKL---HEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWW 134
M G P C+TY A+I ++ + AV+LY+ M G+ PNE Y SLI+ +
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+++A + F M G + I AY +E+A ++ M + PD+ + N+
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 195 VISKFCQD-GELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
++S C D G + +A I EKG D ++++ ++ G L EA ++ EM
Sbjct: 696 MLS-LCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRES 753
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHL-HDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
+ +++ ++M Y G+ S L H+ + R L D+ TF L L
Sbjct: 754 GLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDW--------GTFKTLFTLL 805
Query: 313 CSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW--- 369
G+P +S +YN +A L ++
Sbjct: 806 KK-----------GGVPSEAVSQLQTAYN-------------EAKPLATPAITATLFSAM 841
Query: 370 -LDEYTYESLMEGLSDEV-----TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
L Y ES E S E+ Y++++ Y A G++ K M G PD VT
Sbjct: 842 GLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQ 901
Query: 424 GVFINGLNKKATTSIAKGILLRM 446
+ K K + R+
Sbjct: 902 AYLVGIYGKAGMVEGVKRVHSRL 924
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 140/301 (46%), Gaps = 17/301 (5%)
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
+V EM + G T+N LIC + AV + + + P + +Y ++++ L
Sbjct: 170 RLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSL 229
Query: 131 CTWWLDKAYK----VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
K YK V+ +M+ GF P V TYN + ++++ +F MA G S
Sbjct: 230 LGV---KQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFS 286
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
PD +YN ++ + + AL E GI P + Y+ LI L G+L EA
Sbjct: 287 PDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNL-EACKY 345
Query: 247 FL-EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
FL EM++ P YT ++ Y + GE A + EM +G LP+ + T+
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN--------VFTY 397
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
N++I GLC EA +L+ M G +P+ V Y+T++ + +L +A ++ EM +
Sbjct: 398 NSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Query: 366 K 366
K
Sbjct: 458 K 458
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 119/269 (44%), Gaps = 25/269 (9%)
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-------L 135
P +YNA++ + V+ +Y QM G SP+ TY L+ W +
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILL------WTNYRLGKM 270
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
D+ ++F+EM GF P TYN + + AL + M E G+ P ++ Y +
Sbjct: 271 DRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTL 330
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
I + G LE E V+ G PD V Y+ +I + G L +A ++F EM
Sbjct: 331 IDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQ 390
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
P+ TY ++ C+ GEF A L EM RG P+FV+ ++ L+ L
Sbjct: 391 LPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV--------YSTLVSYLRKA 442
Query: 316 ERVDEALGILRGMPEMG----LSPDAVSY 340
++ EA ++R M + G L P + Y
Sbjct: 443 GKLSEARKVIREMVKKGHYVHLVPKMMKY 471
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 7/268 (2%)
Query: 23 GFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLA 82
G A ++V+ + K TF P+ S+ ++ L ++ + + V ++M G +
Sbjct: 198 GLAKQAVVQFMKSK---TFNY---RPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFS 251
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKV 141
PD TYN L+ ++ M L+D+M G SP+ TY L+ +L A
Sbjct: 252 PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTT 311
Query: 142 FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
N M G PSV Y I + +E M + G PD+V Y +I+ +
Sbjct: 312 LNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVV 371
Query: 202 DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
GEL+KA E+ E KG LP+ TY+++I+ LC+ G EA L EM +P+
Sbjct: 372 SGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVV 431
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
Y+ L+ G+ S A + EM +G
Sbjct: 432 YSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 128/309 (41%), Gaps = 21/309 (6%)
Query: 139 YKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISK 198
+++ +EM+ GF + T+N I + + +QA+ F P SYNA+++
Sbjct: 169 WRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNS 228
Query: 199 FCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPS 258
+ + + + +E G PD +TY+ L+ G + LF EM R SP
Sbjct: 229 LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPD 288
Query: 259 NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERV 318
+ TY L++ + A + M+ G PS++ + LI GL +
Sbjct: 289 SYTYNILLHILGKGNKPLAALTTLNHMKEVGI--------DPSVLHYTTLIDGLSRAGNL 340
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
+ L M + G PD V Y ++ G+ EL KA E+ EM K + +TY S+
Sbjct: 341 EACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 400
Query: 379 MEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
+ GL G ++ L +EM G P+ V ++ L K S
Sbjct: 401 IRGLC-------------MAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSE 447
Query: 439 AKGILLRMI 447
A+ ++ M+
Sbjct: 448 ARKVIREMV 456
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 129/319 (40%), Gaps = 43/319 (13%)
Query: 260 STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVD 319
++Y LM + GE+ + L DEM GF + TFN LI
Sbjct: 150 NSYHLLMKIFAECGEYKAMWRLVDEMVQDGF--------PTTARTFNLLICSCGEAGLAK 201
Query: 320 EALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
+A+ P SYN +L +++ K L E+ Y+ ++
Sbjct: 202 QAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYK---------------LIEWVYKQML 246
Query: 380 E-GLSDEV-TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTS 437
E G S +V TY+ LL + G M + +L EM R+G+ PDS T + ++ L K
Sbjct: 247 EDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPL 306
Query: 438 IAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHER 497
A L M + PS + Y TLI+ S G + +
Sbjct: 307 AALTTLNHM--KEVGIDPSVLHYTTLIDG---------------LSRAGNLEACKYFLDE 349
Query: 498 MHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
M +PD Y ++I + G ++KA EM++EM G P++F+ S+I L +
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 409
Query: 558 NSEMGWVIRN-TLRSCNLN 575
E W+++ R CN N
Sbjct: 410 FREACWLLKEMESRGCNPN 428
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 144/353 (40%), Gaps = 40/353 (11%)
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
SY+ ++ F + GE + + E V+ G T++ LI + G +A F++
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKS 210
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIH 310
+ P +Y ++ + V ++ + ++ +M GF SP ++T+N L+
Sbjct: 211 KTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGF--------SPDVLTYNILLW 262
Query: 311 GLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWL 370
L ++D + M G SPD+ +YN +L + + A M E I
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 371 DEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL 430
Y +L++GLS GN++ EM + G PD V V I G
Sbjct: 323 SVLHYTTLIDGLS-------------RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGY 369
Query: 431 NKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVN 489
AK + M +P+ Y+++I C EF+ A L+K+ +RG
Sbjct: 370 VVSGELDKAKEMFREMTVKG--QLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG--- 424
Query: 490 EAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHM 542
P+ VY+ L+ + G +++A ++ +EMV G + H+
Sbjct: 425 -------------CNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHL 464
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
P +V + +I +++AKE+ REM KG P+ TYN++I G+C A
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACW 415
Query: 107 LYDQMRVRGLSPNERTYMSLIDLL-CTWWLDKAYKVFNEMIASG----FLPSVATYNK 159
L +M RG +PN Y +L+ L L +A KV EM+ G +P + Y +
Sbjct: 416 LLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 156/338 (46%), Gaps = 30/338 (8%)
Query: 139 YKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISK 198
++VF+EM + TY + Y ++ +V++A+G+F E G+ DLV+++ ++
Sbjct: 163 HQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMW 222
Query: 199 FCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPS 258
C+ +E A E + + D + ++ C+ G++ EA + +++ P
Sbjct: 223 LCRYKHVEFA-ETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPD 281
Query: 259 NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERV 318
+Y ++ A G+ A L+ M + + +P + N +I LC +R+
Sbjct: 282 VVSYGTMINALTKKGKLGKAMELYRAM--------WDTRRNPDVKICNNVIDALCFKKRI 333
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK----------II 368
EAL + R + E G P+ V+YN++L C+IR +K +EL EM+ K
Sbjct: 334 PEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFS 393
Query: 369 WLDEYTYES-----LMEGLSD---EVT---YSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
+L +Y+ S ++E ++ E+T Y+ + Y +KV ++ EM R+G
Sbjct: 394 YLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLG 453
Query: 418 PDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP 455
PD T + I+GL+ K A M+S + P
Sbjct: 454 PDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP 491
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 138/312 (44%), Gaps = 23/312 (7%)
Query: 36 KVGETFGLLR------MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYN 89
KV E G+ ++ LV+F G++ LC + +E A E + R+ D + N
Sbjct: 193 KVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA-ETLFCSRRREFGCDIKAMN 251
Query: 90 ALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIAS 148
++ G C + N+ A + + P+ +Y ++I+ L L KA +++ M +
Sbjct: 252 MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDT 311
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
P V N I A +R+ +AL +F ++E+G P++V+YN+++ C+ EK
Sbjct: 312 RRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKV 371
Query: 209 LEIKAETVEKG--ILPDDVTYSALIQALCLQGSLPEAFDLFLE-MLRGDVSPSNSTYTRL 265
E+ E KG P+DVT+S L++ + D+ LE M + ++ Y +
Sbjct: 372 WELVEEMELKGGSCSPNDVTFSYLLKY----SQRSKDVDIVLERMAKNKCEMTSDLYNLM 427
Query: 266 MYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL 325
Y + + EM G PD T+ IHGL + ++ EAL
Sbjct: 428 FRLYVQWDKEEKVREIWSEMERSGLGPD--------QRTYTIRIHGLHTKGKIGEALSYF 479
Query: 326 RGMPEMGLSPDA 337
+ M G+ P+
Sbjct: 480 QEMMSKGMVPEP 491
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 13/219 (5%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R P + VI LC K+R+ EA EV RE++ KG P+ TYN+L+ +CK+R
Sbjct: 312 RRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKV 371
Query: 105 VELYDQMRVRG--LSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVAT-YNKFI 161
EL ++M ++G SPN+ T+ L+ K + E +A + YN
Sbjct: 372 WELVEEMELKGGSCSPNDVTFSYLLKYSQR---SKDVDIVLERMAKNKCEMTSDLYNLMF 428
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
Y+ ++ E+ I+S M GL PD +Y I G++ +AL E + KG++
Sbjct: 429 RLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMV 488
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
P+ T L Q + P D +MLR +++ S
Sbjct: 489 PEPRTEMLLNQ----NKTKPRVED---KMLRSNLTSEES 520
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 163/397 (41%), Gaps = 34/397 (8%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
+ ++ L + R EE +V EM+++ + +TY L+ + AV ++++ +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 113 VRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMI----ASGFLPSVATYNKFITAYLSSE 168
G+ + + L+ LC + + F E + F + N + +
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRY----KHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLG 261
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
V +A + + PD+VSY +I+ + G+L KA+E+ + PD +
Sbjct: 262 NVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICN 321
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
+I ALC + +PEA ++F E+ P+ TY L+ C + + L +EM +
Sbjct: 322 NVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELK 381
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
G SP+ VTF+ L L +R + +L M + + YN + +
Sbjct: 382 GG------SCSPNDVTFSYL---LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYV 432
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLE 408
Q + +K E+ EM+ + D+ TY + GL +G + +
Sbjct: 433 QWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGL-------------HTKGKIGEALSYF 479
Query: 409 REMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR 445
+EM G +P+ T + LN+ T + +LR
Sbjct: 480 QEMMSKGMVPEPRTEML----LNQNKTKPRVEDKMLR 512
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 107/219 (48%), Gaps = 10/219 (4%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +VS+ +I L +K ++ +A E+ R M PD + N +I +C + + A+E+
Sbjct: 280 PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEV 339
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASG--FLPSVATYNKFITAY 164
+ ++ +G PN TY SL+ LC +K +++ EM G P+ T++ ++ Y
Sbjct: 340 FREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFS-YLLKY 398
Query: 165 LSSERVEQALGIFSAMAERG--LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
S+R + + MA+ ++ DL YN + + Q + EK EI +E G+ P
Sbjct: 399 --SQRSKDVDIVLERMAKNKCEMTSDL--YNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
D TY+ I L +G + EA F EM+ + P T
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 92/444 (20%), Positives = 165/444 (37%), Gaps = 63/444 (14%)
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE-RGLSPDLVSYNAVISKFCQDGE 204
+ + FL S+ +KF + + + AL + + + RG SP+ + ++ K D
Sbjct: 51 LGTHFLHSLGAPDKFPNRFNDDKDKQSALDVHNIIKHHRGSSPEKIK--RILDKCGIDLT 108
Query: 205 LEKALEIKAET--------------VEKGI-LPDDVTYSALIQALCLQGSLPEAFDLFLE 249
E LE+ V++ + L + Y+ ++ L E +F E
Sbjct: 109 EELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDE 168
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
M + D + TY L+ Y + A + + + G D LV F+ L+
Sbjct: 169 MSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDD--------LVAFHGLL 220
Query: 310 HGLCSLERVDEALGIL-RGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKII 368
LC + V+ A + E G D + N +L G+C + + +A K
Sbjct: 221 MWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWCVLGNVHEA---------KRF 269
Query: 369 WLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFIN 428
W D + D V+Y +++N +G + K +L R M PD I+
Sbjct: 270 WKDIIASKCR----PDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVID 325
Query: 429 GLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRG- 486
L K A + R IS + P+ + Y++L+++ C + LV++ +G
Sbjct: 326 ALCFKKRIPEALEVF-REISEKGPD-PNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG 383
Query: 487 -----------------LVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEM 529
+ I ERM + +YNL+ + + K E+
Sbjct: 384 SCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREI 443
Query: 530 YKEMVHYGFFPHMFSVLSLIHALY 553
+ EM G P + IH L+
Sbjct: 444 WSEMERSGLGPDQRTYTIRIHGLH 467
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 177/382 (46%), Gaps = 27/382 (7%)
Query: 57 IKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGL 116
I +L + +EEA R P T N ++ + ++L+ + G+
Sbjct: 102 ILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGI 161
Query: 117 SPNERTYMSLIDLLCTWWLD--------KAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
+PN TY +L+ +LD + YK+F + + PS+AT+ + +S++
Sbjct: 162 APNIITY----NLIFQAYLDVRKPEIALEHYKLF--IDNAPLNPSIATFRILVKGLVSND 215
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEK--GILPDDVT 226
+E+A+ I MA +G D V Y+ ++ ++ + + L++ E EK G + D V
Sbjct: 216 NLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVV 275
Query: 227 YSALIQALCLQGSLPEAFDLFLEML--RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
Y L++ ++ EA + + E + V S Y ++ A G+F A L D
Sbjct: 276 YGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDA 335
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
++ P + +L TFN +++G C+ + +EA+ + R M + SPD +S+N ++
Sbjct: 336 VKKEHNPPR---HLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLM 392
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM-----EGLSDE-VTYSSLLNDYFAQ 398
C L +A +L EM+EK + DEYTY LM EG DE Y + + +
Sbjct: 393 NQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLR 452
Query: 399 GNMQKVFKLEREMTRNGYLPDS 420
N+ +L+ ++ + G L D+
Sbjct: 453 PNLAVYNRLQDQLIKAGKLDDA 474
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 153/368 (41%), Gaps = 60/368 (16%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P + +F+ ++K L + +E+A E+ +M KG D Y+ L+ G K + +
Sbjct: 197 LNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVL 256
Query: 106 ELYDQMRVR---------------------------------GLSPNERTYMS------- 125
+LY +++ + + N + MS
Sbjct: 257 KLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYV 316
Query: 126 LIDLLCTWWLDKAYKVFNEMIASGFLP-----SVATYNKFITAYLSSERVEQALGIFSAM 180
L L D+A K+F+ + P ++ T+N + Y + + E+A+ +F M
Sbjct: 317 LEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQM 376
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
+ SPD +S+N ++++ C + L +A ++ E EK + PD+ TY L+ +G +
Sbjct: 377 GDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKI 436
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
E + M+ ++ P+ + Y RL G+ A D M + + D +F
Sbjct: 437 DEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEAYKF-- 494
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC--QIRELKKAYE 358
++ L R+DE L I+ M L D V + L F ++R+ + +
Sbjct: 495 -------IMRALSEAGRLDEMLKIVDEM----LDDDTVRVSEELQEFVKEELRKGGREGD 543
Query: 359 LKVEMDEK 366
L+ M+EK
Sbjct: 544 LEKLMEEK 551
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 144/379 (37%), Gaps = 57/379 (15%)
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
I K ++ +LE+A +V P T + ++ A Q L + + +
Sbjct: 102 ILKLIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGI 161
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
+P+ TY + AY V + +A + H D +PS+ TF L+ GL S
Sbjct: 162 APNIITYNLIFQAYLDVRKPEIA------LEHYKLFIDNA-PLNPSIATFRILVKGLVSN 214
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWL--DEY 373
+ +++A+ I M G D V Y+ ++ G + + +L E+ EK+ D
Sbjct: 215 DNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGV 274
Query: 374 TYESLMEGL-------------------SDEVTYSSLLNDYFAQ-----GNMQKVFKLER 409
Y LM+G + +V S++ +Y + G + KL
Sbjct: 275 VYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFD 334
Query: 410 EMTRNGYLPD--SVTLGVF---INGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
+ + P +V LG F +NG A + +M +C DTL
Sbjct: 335 AVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSP-------DTLS 387
Query: 465 ENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHC-RRGNV 523
N L+ L+ EA + M +VKPD Y LL+ D C + G +
Sbjct: 388 FN----------NLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM-DTCFKEGKI 436
Query: 524 NKAYEMYKEMVHYGFFPHM 542
++ YK MV P++
Sbjct: 437 DEGAAYYKTMVESNLRPNL 455
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 116/252 (46%), Gaps = 16/252 (6%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
S ++K L E+ ++EA M PD YN +I +C+V N A L DQ
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 111 MRVRGL--SPNERTYMSLIDLLCTWWLD------------KAYKVFNEMIASGFLPSVAT 156
M++ G P+ TY LI C + + +A ++F EM+ GF+P V T
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT 285
Query: 157 YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
YN I + R+ +AL +F M +G P+ V+YN+ I + E+E A+E+
Sbjct: 286 YNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMK 345
Query: 217 EKGI-LPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
+ G +P TY+ LI AL EA DL +EM+ + P TY + A G
Sbjct: 346 KLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLA 405
Query: 276 S-MAFHLHDEMR 286
S + LH MR
Sbjct: 406 STLDEELHKRMR 417
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 28/264 (10%)
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL--PDDVTY 227
V++AL F M E PD+ +YN +I+ C+ G +KA + + G PD TY
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 228 SALIQALCLQG-----------SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
+ LI + C G + EA +F EML P TY L+ C
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS-P 335
A L ++M+ +G +P+ VT+N+ I ++ A+ ++R M ++G P
Sbjct: 301 RALELFEDMKTKGCVPN--------QVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVP 352
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSL---L 392
+ +Y ++ + R +A +L VEM E + EYTY+ + + LS E S+L L
Sbjct: 353 GSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEEL 412
Query: 393 NDYFAQGNMQ---KVFKLEREMTR 413
+ +G Q +V K++ M R
Sbjct: 413 HKRMREGIQQRYSRVMKIKPTMAR 436
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 15/207 (7%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGL--APDCETYNALICGMCKV------ 98
+P + ++ +I LC ++A+ ++ +M G PD TY LI C+
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 99 -----RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLP 152
R M A ++ +M RG P+ TY LID C T + +A ++F +M G +P
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLS-PDLVSYNAVISKFCQDGELEKALEI 211
+ TYN FI Y + +E A+ + M + G P +Y +I + +A ++
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDL 376
Query: 212 KAETVEKGILPDDVTYSALIQALCLQG 238
E VE G++P + TY + AL +G
Sbjct: 377 VVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM-LRG-DVSPS 258
++G +++AL E PD Y+ +I ALC G+ +A L +M L G P
Sbjct: 177 EEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPD 236
Query: 259 NSTYTRLMYAYCLVG-----------EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
TYT L+ +YC G A + EM RGF+PD +VT+N
Sbjct: 237 TYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD--------VVTYNC 288
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
LI G C R+ AL + M G P+ V+YN+ + + E++ A E+ M
Sbjct: 289 LIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM---- 344
Query: 368 IWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFI 427
+ L G+ TY+ L++ + L EM G +P T +
Sbjct: 345 --------KKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVC 396
Query: 428 NGLNKKATTS 437
+ L+ + S
Sbjct: 397 DALSSEGLAS 406
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 31/234 (13%)
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+ L++ L +G + EA F M P Y ++ A C VG F A L D+M+
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSL-----------ERVDEALGILRGMPEMGLSPD 336
GF ++ P T+ LI C R+ EA + R M G PD
Sbjct: 229 PGF------RYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD 282
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
V+YN ++ G C+ + +A EL +M K + ++VTY+S + Y
Sbjct: 283 VVTYNCLIDGCCKTNRIGRALELFEDMKTKGC-------------VPNQVTYNSFIRYYS 329
Query: 397 AQGNMQKVFKLEREMTRNGY-LPDSVTLGVFINGLNKKATTSIAKGILLRMISS 449
++ ++ R M + G+ +P S T I+ L + + A+ +++ M+ +
Sbjct: 330 VTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEA 383
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 145/326 (44%), Gaps = 46/326 (14%)
Query: 84 DCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVF 142
+ E N LI K+ A +++ + G +PN +TY ++ LC ++D A V
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 143 NEMIASGFLPSVATYNKFITAYLSSERVEQALGIF--SAMAERGLSPDLVSYNAVISKFC 200
+M+ SG L IT + + E+A ++ + E+ L P V+ +I+ C
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALC 347
Query: 201 Q-DGELEKALE----IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
+ DG + A E + E +GI P +S +I +LC ++ +A L L+M+
Sbjct: 348 KNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGP 403
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI------------------- 296
+P N+ + +++A G+ A + M RG PD
Sbjct: 404 APGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQE 463
Query: 297 ----------QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
+ SP VT++ALI G C +E DEAL +L M G+ P+A YN ++
Sbjct: 464 ILAEAKKKHKKLSP--VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQS 521
Query: 347 FC-QIRELKKAYELKVEMDEKIIWLD 371
FC + + +KA L EM +K + L+
Sbjct: 522 FCLKALDWEKAEVLFEEMKQKGLHLN 547
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 117/251 (46%), Gaps = 15/251 (5%)
Query: 56 VIKELCEKERMEEAKEV--VREMNRKGLAPDCETYNALICGMCKVRNMLCAVE-----LY 108
+I C++ + EEA V + + K L P LI +CK + + L
Sbjct: 307 IITWFCKEGKAEEAYSVYELAKTKEKSLPP--RFVATLITALCKNDGTITFAQEMLGDLS 364
Query: 109 DQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
+ R RG+ P + +I LC + A + +MI+ G P A +N + A +
Sbjct: 365 GEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKT 420
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
+++A + M RGL PD+ +Y +IS + + G +++A EI AE +K VTY
Sbjct: 421 GDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTY 480
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG-EFSMAFHLHDEMR 286
ALI+ C EA L EM R V P+ Y +L+ ++CL ++ A L +EM+
Sbjct: 481 HALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMK 540
Query: 287 HRGFLPDFVIQ 297
+G + + Q
Sbjct: 541 QKGLHLNAISQ 551
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 16/309 (5%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
E FG P ++ ++ LC++ M+ A V +M + G+ + E +I CK
Sbjct: 258 EEFGFT---PNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKE 314
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT--WWLDKAYKVFNEMIASGFLPSVAT 156
A +Y+ + + S R +LI LC + A ++ ++ +
Sbjct: 315 GKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP 374
Query: 157 YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
++ I + V+ A + M +G +P +N V+ + G+L++A E+
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
+G+ PD TY+ +I G + EA ++ E + S TY L+ YC + E+
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVD--EALGILRGMPEMGLS 334
A L +EM G P+ +N LI C L+ +D +A + M + GL
Sbjct: 495 EALKLLNEMDRFG--------VQPNADEYNKLIQSFC-LKALDWEKAEVLFEEMKQKGLH 545
Query: 335 PDAVSYNTV 343
+A+S +
Sbjct: 546 LNAISQGLI 554
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 142/300 (47%), Gaps = 15/300 (5%)
Query: 40 TFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVR 99
+ ++E + F+ ++ LC + + +A ++ N+ D +++N ++ G C V
Sbjct: 222 AYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIF-CNKDKYPFDAKSFNIVLNGWCNVI 280
Query: 100 NMLCAVE-LYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATY 157
E ++ +M G+ + +Y S+I L+K K+F+ M P Y
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 158 NKFITAYLSSERVEQALGIFSAMAE-RGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
N + A + V +A + M E +G+ P++V+YN++I C+ + E+A ++ E +
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
EKG+ P TY A ++ L + E F+L +M + P+ TY L+ C +F
Sbjct: 401 EKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFD 457
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
L DEM+ + PD L ++ +IHGL +++EA G + M + G+ P+
Sbjct: 458 NVLLLWDEMKEKTVGPD--------LSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 28 SVMSCKEK-----KVGETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEVVREMNR- 78
S++SC K KV + F ++ +EP + V+ L + + EA+ +++ M
Sbjct: 307 SMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEE 366
Query: 79 KGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKA 138
KG+ P+ TYN+LI +CK R A +++D+M +GL P RTY + + +L T ++
Sbjct: 367 KGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTG--EEV 424
Query: 139 YKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISK 198
+++ +M G P+V TY I + L ++ M E+ + PDL SY +I
Sbjct: 425 FELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHG 484
Query: 199 FCQDGELEKALEIKAETVEKGILPDD 224
+G++E+A E +KG+ P++
Sbjct: 485 LFLNGKIEEAYGYYKEMKDKGMRPNE 510
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 4/177 (2%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+EP +V++ +IK LC+ + EEAK+V EM KGL P TY+A M +R
Sbjct: 369 IEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAF---MRILRTGEEVF 425
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAY 164
EL +MR G P TY+ LI LC W D +++EM P +++Y I
Sbjct: 426 ELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGL 485
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
+ ++E+A G + M ++G+ P+ + + S F E+ + V KG +
Sbjct: 486 FLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFSGKQYAEQRITDSKGEVNKGAI 542
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 143/356 (40%), Gaps = 48/356 (13%)
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS-TYTRLMYAYCLVGEFSMA---FHLH 282
Y ++I L A+ L EM + S NS T ++ YC V + A FH +
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
+ + DF +L+ LC + V +A G L + DA S+N
Sbjct: 224 KRFKLEMGIDDF-----------QSLLSALCRYKNVSDA-GHLIFCNKDKYPFDAKSFNI 271
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGNM 401
VL G+C + + + + +W++ G+ D V+YSS+++ Y G++
Sbjct: 272 VLNGWCNV--------IGSPREAERVWMEMGNV-----GVKHDVVSYSSMISCYSKGGSL 318
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
KV KL M + PD ++ L K + S A+ ++ M + + P+ + Y+
Sbjct: 319 NKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIE-PNVVTYN 377
Query: 462 TLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAH----------------ERMHNMSVK 504
+LI+ C + + A + + +GL H +M M +
Sbjct: 378 SLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCE 437
Query: 505 PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSE 560
P Y +LI CR + + ++ EM P + S + +IH L+ + K E
Sbjct: 438 PTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEE 493
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/497 (20%), Positives = 205/497 (41%), Gaps = 56/497 (11%)
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAY 164
+ +++++ G R ++ L+++ + DKA +V+ M + GF+P+ N +
Sbjct: 94 RIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVN 153
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK---AETVEKGIL 221
V AL IF + R + S++ +S FC G + +K + +G
Sbjct: 154 FKLNVVNGALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFY 209
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
P+ + +++ C G + EAF + M+ +S S + ++ L+ + GE A L
Sbjct: 210 PNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDL 269
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
++M G SP+LVT+ +LI G L VDEA +L + GL+PD V N
Sbjct: 270 FNKMIQIGC--------SPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN 321
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS------------------ 383
++ + ++ ++A ++ ++++ + D+YT+ S++ L
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGIGTD 381
Query: 384 -DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGI 442
D VT + L N + G K+ M+ + D T V+++ L + A
Sbjct: 382 FDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAA--- 438
Query: 443 LLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMS 502
++M Y +I+ +++ ++ G N A +R
Sbjct: 439 -IKM-------------YKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEK 484
Query: 503 VKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMG 562
D Y + I R + +AY + +M G +P+ + ++I L +++ +
Sbjct: 485 YPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEK-- 542
Query: 563 WVIRNTLRSCNLNDSEL 579
+R LR C EL
Sbjct: 543 --VRKILRECIQEGVEL 557
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 166/374 (44%), Gaps = 46/374 (12%)
Query: 34 EKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALIC 93
++ +GE F P F +++ C + EA +VV M G++ ++ L+
Sbjct: 201 KRMIGEGF-----YPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVS 255
Query: 94 GMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLP 152
G + AV+L+++M G SPN TY SLI + +D+A+ V +++ + G P
Sbjct: 256 GFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAP 315
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE------ 206
+ N I Y R E+A +F+++ +R L PD ++ +++S C G+ +
Sbjct: 316 DIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRIT 375
Query: 207 --------------------------KALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
AL++ + K D TY+ + ALC G+
Sbjct: 376 HGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAP 435
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
A ++ +++ ++ ++ + +G+++ A HL F + ++
Sbjct: 436 RAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHL--------FKRCILEKYPL 487
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELK 360
+V++ I GL +R++EA + M E G+ P+ +Y T++ G C+ +E +K ++
Sbjct: 488 DVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKIL 547
Query: 361 VEMDEKIIWLDEYT 374
E ++ + LD T
Sbjct: 548 RECIQEGVELDPNT 561
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 11/316 (3%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
++A EV M+ G P+ N ++ K+ + A+E+++ +R R +
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHF 184
Query: 127 IDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
L V MI GF P+ + + + + V +A + M G+S
Sbjct: 185 CSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGIS 244
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
+ ++ ++S F + GE +KA+++ + ++ G P+ VTY++LI+ G + EAF +
Sbjct: 245 VSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTV 304
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
++ ++P +++ Y +G F A + + R +PD Q+ TF
Sbjct: 305 LSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPD---QY-----TFA 356
Query: 307 ALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEK 366
+++ LC + D I G +G D V+ N + F +I A ++ M K
Sbjct: 357 SILSSLCLSGKFDLVPRITHG---IGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYK 413
Query: 367 IIWLDEYTYESLMEGL 382
LD YTY + L
Sbjct: 414 DFALDCYTYTVYLSAL 429
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/521 (22%), Positives = 209/521 (40%), Gaps = 49/521 (9%)
Query: 18 NVMIRGFA---TESVMS---CKEKKVGETFGLLR-MEPYLVSFKG-----VIKELCEKER 65
+ +RGF T S++ CK+ K+ E LR + P + G ++ LC K +
Sbjct: 242 QISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRK 301
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR-VRGLSPNERTYM 124
+EA +++ E+ G YN I + K + + ++ + G Y
Sbjct: 302 FQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYN 361
Query: 125 SLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
S++ LL LD Y + EM+ G P+ T N + + + V++AL ++ + +E
Sbjct: 362 SMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEI 421
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
G +P +SYN +I C + +E+A ++ +++G T+S L ALC +G A
Sbjct: 422 GFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMA 481
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
+L + D+ P +++ A C VG+ A +++ G S
Sbjct: 482 RELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSG--------VDTSFK 533
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
F +LI+G +L R D A ++ M E G +P Y V+ C++ +K + +
Sbjct: 534 MFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLK 593
Query: 364 DEKIIWLDE-YTYESLMEGLS-----------------DEVTYSS-----LLNDYFAQGN 400
+ +W + Y +EG D +T + +L Y
Sbjct: 594 FQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEK 653
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIY 460
+ ++ G + V I GL K A L M PS Y
Sbjct: 654 IADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEG--LQPSIECY 710
Query: 461 DTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHN 500
+ I+ C+ ++ AVGLV +F G A I + +HN
Sbjct: 711 EVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHN 751
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/491 (20%), Positives = 185/491 (37%), Gaps = 125/491 (25%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
+ ++ +L ++ ++ +++ EM +G++P+ +T NA +C CK + A+ELY
Sbjct: 360 YNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRS 419
Query: 113 VRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVE 171
G +P +Y LI LC +++AY V I G T++ A + +
Sbjct: 420 EIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPD 479
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKAL---------------------- 209
A + A AER L P ++ +IS C G++E AL
Sbjct: 480 MARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLI 539
Query: 210 ---------EIKAETV----EKGILPDDVTYSALIQALC---------------LQGSLP 241
+I A+ + EKG P Y +IQ +C Q SL
Sbjct: 540 YGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLW 599
Query: 242 E----AFDLFLE-----------------MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFH 280
E A++LF+E M R ++P+ ++ ++ +Y + + A H
Sbjct: 600 EHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALH 659
Query: 281 LHDEMRHRGFLPDFVIQ--------------------------FSPSLVTFNALIHGLCS 314
++R +G + Q PS+ + I LC+
Sbjct: 660 FFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCN 719
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC-----------------QIRELKKAY 357
E+ DEA+G++ + G A N +L +I E+K
Sbjct: 720 EEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLG 779
Query: 358 EL------KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
EL +++M+ ++ LDE + D TY+ LL + +++ +
Sbjct: 780 ELIGLFSGRIDMEVELKRLDEVIEKCYP---LDMYTYNMLLR-MIVMNQAEDAYEMVERI 835
Query: 412 TRNGYLPDSVT 422
R GY+P+ T
Sbjct: 836 ARRGYVPNERT 846
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 128/300 (42%), Gaps = 19/300 (6%)
Query: 89 NALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKV-FNEMIA 147
+AL+ G A++ + MR RGL + Y L++ L ++ V F+++
Sbjct: 186 DALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISV 245
Query: 148 SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEK 207
GF+ +V T++ + + ++++A A+ + ++ C + ++
Sbjct: 246 RGFVCAV-THSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQE 304
Query: 208 ALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF-----LEMLRGDVSPSNSTY 262
A ++ E G + D Y+ I+AL G L D LE +V NS
Sbjct: 305 ATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMV 364
Query: 263 TRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEAL 322
+L+ L G + + EM RG SP+ T NA + C VDEAL
Sbjct: 365 FQLLKENNLDG----VYDILTEMMVRGV--------SPNKKTMNAALCFFCKAGFVDEAL 412
Query: 323 GILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL 382
+ R E+G +P A+SYN ++ C +++AY++ ++ +L T+ +L L
Sbjct: 413 ELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNAL 472
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 156/367 (42%), Gaps = 33/367 (8%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P S+ VIK L ++ +E+ +V + PD +TY ++ +CK + A +
Sbjct: 510 PLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAI 569
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
D M GL P Y S+I L + +A + F +M+ SG P Y I Y
Sbjct: 570 IDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+ R+++A + + + L P +Y +IS F + G +EK + + +E G+ P+ V
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL 689
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC----------LVGEFS 276
Y+ALI +G +F LF M D+ + Y L+ ++ E
Sbjct: 690 YTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPG 749
Query: 277 MAFHLHDEMRHRGF--LPDFVIQFS-----------------PSLVTFNALIHGLCSLER 317
L +R + +P + + P+L N +I G C+ R
Sbjct: 750 KEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGR 809
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
+DEA L M + G+ P+ V+Y ++ + +++ A +L + D+ Y +
Sbjct: 810 LDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDL---FEGTNCEPDQVMYST 866
Query: 378 LMEGLSD 384
L++GL D
Sbjct: 867 LLKGLCD 873
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 203/515 (39%), Gaps = 78/515 (15%)
Query: 42 GLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNM 101
G+ RM + +K + C++ EA+ + M G D Y L+ CK NM
Sbjct: 229 GMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNM 288
Query: 102 LCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKF 160
A+ LY +M R + + +LI + LDK +F++MI G +V TY+
Sbjct: 289 TMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIM 348
Query: 161 ITAYLSSERVEQALGIF-SAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
I +Y V+ AL +F + +S ++ Y +I F + G ++KA+++ ++ G
Sbjct: 349 IGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNG 408
Query: 220 ILPDDVTYSALIQAL-----------CLQGSL-------PEAFD-----------LFLEM 250
I+PD +TY L++ L LQ L P D L E+
Sbjct: 409 IVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEI 468
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP-----DFVIQ-------- 297
R D + + + A C + A ++M + G P + VI+
Sbjct: 469 ARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENII 528
Query: 298 --------------FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
F P + T+ +++ LC D A I+ M E+GL P Y+++
Sbjct: 529 EDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSI 588
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQK 403
+ + + +A E +M E I DE+ Y ++N Y G + +
Sbjct: 589 IGSLGKQGRVVEAEETFAKMLESGIQ-------------PDEIAYMIMINTYARNGRIDE 635
Query: 404 VFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTL 463
+L E+ ++ P S T V I+G K L +M+ P+ ++Y L
Sbjct: 636 ANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDG--LSPNVVLYTAL 693
Query: 464 IENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERM 498
I + F F+ GL+ E I H+ +
Sbjct: 694 IGH-----FLKKGDFKFSFTLFGLMGENDIKHDHI 723
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 191/480 (39%), Gaps = 48/480 (10%)
Query: 80 GLAPDCETYNALICGMCKVRNMLCAVELYDQMRV-RGLSPNERTYMSLIDLLCTWW-LDK 137
G+ D Y ALI + ++ A Y+Q + G+ P+ S++ L D+
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A + +IASG+ PS + + + + +R +A F + ERG L +
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVT-YSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
C G L +A+ + +P V Y +L C +G EA LF M
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYY 269
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
YT LM YC +MA L+ M R F + P + FN LIHG L
Sbjct: 270 VDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSF------ELDPCI--FNTLIHGFMKLG 321
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
+D+ + M + G+ + +Y+ ++ +C +E Y L++ +
Sbjct: 322 MLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYC--KEGNVDYALRL-----------FVNN 368
Query: 377 SLMEGLSDEV-TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT 435
+ E +S V Y++L+ ++ +G M K L M NG +PD +T V + L K
Sbjct: 369 TGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHE 428
Query: 436 TSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
A IL ++ + C P +I++ +E K L+ E A
Sbjct: 429 LKYAMVILQSILDNGCGINPP------VIDDLGNIEVK----------VESLLGEIA--- 469
Query: 496 ERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
+ N++ V L C + N A ++MV+ G P FS S+I L+ +
Sbjct: 470 RKDANLAAVGLAVVTTAL----CSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE 525
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/523 (21%), Positives = 204/523 (39%), Gaps = 75/523 (14%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
V V LC + A + +M G P +YN++I + + + L +
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 111 MRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
++ P+ TY+ +++ LC D A+ + + M G P+VA Y+ I + R
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
V +A F+ M E G+ PD ++Y +I+ + ++G +++A E+ E V+ + P TY+
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL-------- 281
LI G + + +ML +SP+ YT L+ + G+F +F L
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEND 717
Query: 282 --HDEMRHRGFLPDF------------------------VIQFSPSLVTFNALIHGLCSL 315
HD + + L +I+ P LV+ + + S
Sbjct: 718 IKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKP-LVSIPSSLGNYGSK 776
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
E +G ++ + P+ +NT++ G+C L +AY L+
Sbjct: 777 SFAMEVIGKVKK----SIIPNLYLHNTIITGYCAAGRLDEAYN----------HLESMQK 822
Query: 376 ESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT 435
E ++ L VTY+ L+ + G+++ L PD V + GL
Sbjct: 823 EGIVPNL---VTYTILMKSHIEAGDIESAIDL---FEGTNCEPDQVMYSTLLKGLCDFKR 876
Query: 436 TSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFK-SAVGLVKDFSTRGLVNEAAIA 494
A ++L M S P+ Y+ L++ Y AV +VKD
Sbjct: 877 PLDALALMLEMQKSG--INPNKDSYEKLLQCLCYSRLTMEAVKVVKD------------- 921
Query: 495 HERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYG 537
M + + P + LI+ C + +A ++ MV G
Sbjct: 922 ---MAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 204/523 (39%), Gaps = 64/523 (12%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
V+ ELC ++R EA ++ +G L G+C ++ A+ + D +
Sbjct: 172 VVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMT 231
Query: 116 LSP-NERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQA 173
P Y SL C +A +F+ M G+ Y + Y + A
Sbjct: 232 RMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMA 291
Query: 174 LGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA 233
+ ++ M ER D +N +I F + G L+K + ++ ++KG+ + TY +I +
Sbjct: 292 MRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGS 351
Query: 234 LCLQGSLPEAFDLFLEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP 292
C +G++ A LF+ D+S + YT L++ + G A L M G +P
Sbjct: 352 YCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
Query: 293 DFVIQF------------SPSLVTFNALIHGLCSLE------------RVDEALG-ILRG 327
D + F ++V +++ C + +V+ LG I R
Sbjct: 412 DHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARK 471
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD-EV 386
+ AV V C R Y + EK++ L G +
Sbjct: 472 DANLA----AVGLAVVTTALCSQRN----YIAALSRIEKMVNL----------GCTPLPF 513
Query: 387 TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
+Y+S++ F + ++ + L + ++PD T + +N L KK A I+ M
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 447 ISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPD 506
+ P+ IY ++I + +G V EA +M ++PD
Sbjct: 574 --EELGLRPTVAIYSSIIGS---------------LGKQGRVVEAEETFAKMLESGIQPD 616
Query: 507 GAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
Y ++I + R G +++A E+ +E+V + P F+ LI
Sbjct: 617 EIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 132/330 (40%), Gaps = 55/330 (16%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+ P ++ +I + ME+ + + +M GL+P+ Y ALI K + +
Sbjct: 648 LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSF 707
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIA------------------ 147
L+ M G + + +++ I LL W A K ++I
Sbjct: 708 TLFGLM---GENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLV 764
Query: 148 -----------------------SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
+P++ +N IT Y ++ R+++A +M + G
Sbjct: 765 SIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEG 824
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
+ P+LV+Y ++ + G++E A+++ T PD V YS L++ LC +A
Sbjct: 825 IVPNLVTYTILMKSHIEAGDIESAIDLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDAL 881
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
L LEM + ++P+ +Y +L+ C A + +M + P +
Sbjct: 882 ALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMA--------ALDIWPRSIN 933
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLS 334
LI+ LC +++ EA + M + G S
Sbjct: 934 HTWLIYILCEEKKLREARALFAIMVQSGRS 963
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 181/430 (42%), Gaps = 28/430 (6%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P ++ F +I +K + +EA+ + ++ P +TY LI C + A
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 107 LYDQMRVRGLSPNE---RTYMSLIDLLCTWW--LDKAYKVFNEMIASGFLPSVATYNKFI 161
+ +M+ +SP Y + I+ L ++A VF M P+ TYN I
Sbjct: 234 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 293
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
Y + + + ++ M P++ +Y A+++ F ++G EKA EI + E G+
Sbjct: 294 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 353
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
PD Y+AL+++ G A ++F M P ++Y ++ AY G S A +
Sbjct: 354 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 413
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+EM+ G +P++ + L+ V + I++ M E G+ PD N
Sbjct: 414 FEEMKRLG--------IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 465
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM 401
++L + ++ + K ++ EM+ +D TY+ L+N Y G +
Sbjct: 466 SMLNLYGRLGQFTKMEKILAEMENGPC-------------TADISTYNILINIYGKAGFL 512
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
+++ +L E+ + PD VT I ++K + MI S C P
Sbjct: 513 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC--APDGGTAK 570
Query: 462 TLIENCSYVE 471
L+ CS E
Sbjct: 571 VLLSACSSEE 580
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 9/283 (3%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P + ++ ++ + E+A+E+ ++ GL PD YNAL+ + A E
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYL 165
++ M+ G P+ +Y ++D L A VF EM G P++ ++ ++AY
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ V + I M+E G+ PD N++++ + + G+ K +I AE D
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
TY+ LI G L +LF+E+ + P T+T + AY + + +EM
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
G PD T L+ S E+V++ +LR M
Sbjct: 558 IDSGCAPDG--------GTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 63/468 (13%)
Query: 127 IDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
I L+C W L K S F P V +N I AY + ++A ++ + E
Sbjct: 160 IILVCEWILRK----------SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV 209
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV---TYSALIQALC-LQGSLPE 242
P +Y +I +C G +E+A + E + P + Y+A I+ L +G+ E
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 269
Query: 243 AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSL 302
A D+F M R P+ TY ++ Y + M++ L+ EMR Q P++
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH--------QCKPNI 321
Query: 303 VTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL---------FGFCQIREL 353
T+ AL++ ++A I + E GL PD YN ++ +G +I L
Sbjct: 322 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 381
Query: 354 KKAYELKVEMDEKIIWLDEYTYESL----------MEGLSDEVTYSS---LLNDYFAQGN 400
+ + + I +D Y L M+ L T S LL+ Y +
Sbjct: 382 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 441
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT-MPSYII 459
+ K + +EM+ NG PD+ L +N + + + IL M + C + +Y I
Sbjct: 442 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 501
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
L+ + G + + + +PD + I + R
Sbjct: 502 ------------------LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 543
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRN 567
+ K E+++EM+ G P + L+ A + + ++ V+R
Sbjct: 544 KKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 591
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 4/221 (1%)
Query: 37 VGETFGLLRM---EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALIC 93
E F L++ EP S+ ++ +A+ V EM R G+AP +++ L+
Sbjct: 375 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 434
Query: 94 GMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLP 152
K R++ + +M G+ P+ S+++L K K+ EM
Sbjct: 435 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 494
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
++TYN I Y + +E+ +F + E+ PD+V++ + I + + K LE+
Sbjct: 495 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 554
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
E ++ G PD T L+ A + + + + M +G
Sbjct: 555 EEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 595
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 112/262 (42%), Gaps = 7/262 (2%)
Query: 13 HMVRMNV-----MIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERME 67
H + N+ ++ FA E + K +++ E +EP + + +++
Sbjct: 315 HQCKPNICTYTALVNAFAREGLCE-KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY 373
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
A E+ M G PD +YN ++ + A ++++M+ G++P +++M L+
Sbjct: 374 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 433
Query: 128 DLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
+ K + EM +G P N + Y + + I + M +
Sbjct: 434 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 493
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
D+ +YN +I+ + + G LE+ E+ E EK PD VT+++ I A + + ++
Sbjct: 494 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 553
Query: 247 FLEMLRGDVSPSNSTYTRLMYA 268
F EM+ +P T L+ A
Sbjct: 554 FEEMIDSGCAPDGGTAKVLLSA 575
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 126/270 (46%), Gaps = 17/270 (6%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER-GLSPDLVSYN 193
+ A KVF+EM + ++N + A ++S++ + GIF + + + PD+ SYN
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYN 181
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+I C G +A+ + E KG+ PD +T++ L+ +G E ++ M+
Sbjct: 182 TLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK 241
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
+V +Y + + + L D+++ PD + TF A+I G
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPD--------VFTFTAMIKGFV 293
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
S ++DEA+ + + + G P +N++L C+ +L+ AYEL E+ K + +DE
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEA 353
Query: 374 TYESLMEGL--------SDEVTYSSLLNDY 395
+ +++ L ++E+ + NDY
Sbjct: 354 VLQEVVDALVKGSKQDEAEEIVELAKTNDY 383
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 107/214 (50%), Gaps = 2/214 (0%)
Query: 42 GLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNM 101
G L +EP + S+ +IK LC K EA ++ E+ KGL PD T+N L+
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 102 LCAVELYDQMRVRGLSPNERTYMS-LIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKF 160
+++ +M + + + R+Y + L+ L ++ +F+++ + P V T+
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAM 288
Query: 161 ITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI 220
I ++S ++++A+ + + + G P +N+++ C+ G+LE A E+ E K +
Sbjct: 289 IKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 221 LPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
L D+ ++ AL ++GS + + +E+ + +
Sbjct: 349 LVDEAVLQEVVDAL-VKGSKQDEAEEIVELAKTN 381
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 121/269 (44%), Gaps = 22/269 (8%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDC--ETYNALICGM-CKVRNMLCAVELYD 109
++ ++ L ++ E +E++ E N+ P+ E + A I + +V A +++D
Sbjct: 74 YERTVRRLAAAKKFEWVEEILEEQNK---YPNMSKEGFVARIINLYGRVGMFENAQKVFD 130
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWWLDKAYK----VFNEMIAS-GFLPSVATYNKFITAY 164
+M R +RT +S LL K + +F E+ P VA+YN I
Sbjct: 131 EMPERNC---KRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGL 187
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+A+ + + +GL PD +++N ++ + G+ E+ +I A VEK + D
Sbjct: 188 CGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDI 247
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
+Y+A + L ++ E LF ++ ++ P T+T ++ + G+ A + E
Sbjct: 248 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 307
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
+ G P ++F FN+L+ +C
Sbjct: 308 IEKNGCRP---LKF-----VFNSLLPAIC 328
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 127/304 (41%), Gaps = 39/304 (12%)
Query: 263 TRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEAL 322
R++ Y VG F A + DEM R + ++FNAL++ + ++ D
Sbjct: 110 ARIINLYGRVGMFENAQKVFDEMPERNC--------KRTALSFNALLNACVNSKKFDLVE 161
Query: 323 GILRGMP-EMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG 381
GI + +P ++ + PD SYNT++ G C K E + +DE + L
Sbjct: 162 GIFKELPGKLSIEPDVASYNTLIKGLCG----------KGSFTEAVALIDEIENKGLK-- 209
Query: 382 LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG 441
D +T++ LL++ + +G ++ ++ M D + + GL + +
Sbjct: 210 -PDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSE---- 264
Query: 442 ILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM 501
M+S ++D L N + + ++K F + G ++EA ++ +
Sbjct: 265 ---EMVS----------LFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEM 561
+P V+N L+ C+ G++ AYE+ KE+ + ++ AL K E
Sbjct: 312 GCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Query: 562 GWVI 565
++
Sbjct: 372 EEIV 375
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 102/229 (44%), Gaps = 2/229 (0%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVR-GLSPNERTYMS 125
E A++V EM + ++NAL+ + ++ ++ + + P+ +Y +
Sbjct: 123 ENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNT 182
Query: 126 LIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
LI LC +A + +E+ G P T+N + + + E+ I++ M E+
Sbjct: 183 LIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
+ D+ SYNA + + + E+ + + + + PD T++A+I+ +G L EA
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
+ E+ + P + L+ A C G+ A+ L E+ + L D
Sbjct: 303 TWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVD 351
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 181/430 (42%), Gaps = 28/430 (6%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P ++ F +I +K + +EA+ + ++ P +TY LI C + A
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 107 LYDQMRVRGLSPNE---RTYMSLIDLLCTWW--LDKAYKVFNEMIASGFLPSVATYNKFI 161
+ +M+ +SP Y + I+ L ++A VF M P+ TYN I
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
Y + + + ++ M P++ +Y A+++ F ++G EKA EI + E G+
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
PD Y+AL+++ G A ++F M P ++Y ++ AY G S A +
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+EM+ G +P++ + L+ V + I++ M E G+ PD N
Sbjct: 392 FEEMKRLG--------IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLN 443
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNM 401
++L + ++ + K ++ EM+ +D TY+ L+N Y G +
Sbjct: 444 SMLNLYGRLGQFTKMEKILAEMENGPC-------------TADISTYNILINIYGKAGFL 490
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYD 461
+++ +L E+ + PD VT I ++K + MI S C P
Sbjct: 491 ERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGC--APDGGTAK 548
Query: 462 TLIENCSYVE 471
L+ CS E
Sbjct: 549 VLLSACSSEE 558
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 9/283 (3%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P + ++ ++ + E+A+E+ ++ GL PD YNAL+ + A E
Sbjct: 296 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYL 165
++ M+ G P+ +Y ++D L A VF EM G P++ ++ ++AY
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ V + I M+E G+ PD N++++ + + G+ K +I AE D
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 475
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
TY+ LI G L +LF+E+ + P T+T + AY + + +EM
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
G PD T L+ S E+V++ +LR M
Sbjct: 536 IDSGCAPDG--------GTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/468 (22%), Positives = 183/468 (39%), Gaps = 63/468 (13%)
Query: 127 IDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
I L+C W L K S F P V +N I AY + ++A ++ + E
Sbjct: 138 IILVCEWILRK----------SSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV 187
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV---TYSALIQALC-LQGSLPE 242
P +Y +I +C G +E+A + E + P + Y+A I+ L +G+ E
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 247
Query: 243 AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSL 302
A D+F M R P+ TY ++ Y + M++ L+ EMR Q P++
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSH--------QCKPNI 299
Query: 303 VTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL---------FGFCQIREL 353
T+ AL++ ++A I + E GL PD YN ++ +G +I L
Sbjct: 300 CTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSL 359
Query: 354 KKAYELKVEMDEKIIWLDEYTYESL----------MEGLSDEVTYSS---LLNDYFAQGN 400
+ + + I +D Y L M+ L T S LL+ Y +
Sbjct: 360 MQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARD 419
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT-MPSYII 459
+ K + +EM+ NG PD+ L +N + + + IL M + C + +Y I
Sbjct: 420 VTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNI 479
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
L+ + G + + + +PD + I + R
Sbjct: 480 ------------------LINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 521
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRN 567
+ K E+++EM+ G P + L+ A + + ++ V+R
Sbjct: 522 KKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 569
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 4/221 (1%)
Query: 37 VGETFGLLRM---EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALIC 93
E F L++ EP S+ ++ +A+ V EM R G+AP +++ L+
Sbjct: 353 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLS 412
Query: 94 GMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLP 152
K R++ + +M G+ P+ S+++L K K+ EM
Sbjct: 413 AYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 472
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
++TYN I Y + +E+ +F + E+ PD+V++ + I + + K LE+
Sbjct: 473 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 532
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
E ++ G PD T L+ A + + + + M +G
Sbjct: 533 EEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHKG 573
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 112/262 (42%), Gaps = 7/262 (2%)
Query: 13 HMVRMNV-----MIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERME 67
H + N+ ++ FA E + K +++ E +EP + + +++
Sbjct: 293 HQCKPNICTYTALVNAFAREGLCE-KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPY 351
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
A E+ M G PD +YN ++ + A ++++M+ G++P +++M L+
Sbjct: 352 GAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 411
Query: 128 DLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
+ K + EM +G P N + Y + + I + M +
Sbjct: 412 SAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCT 471
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
D+ +YN +I+ + + G LE+ E+ E EK PD VT+++ I A + + ++
Sbjct: 472 ADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEV 531
Query: 247 FLEMLRGDVSPSNSTYTRLMYA 268
F EM+ +P T L+ A
Sbjct: 532 FEEMIDSGCAPDGGTAKVLLSA 553
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 14/195 (7%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
+I LC+ + +EA + + GL PD +TYN +I + ++ A +LY +M RG
Sbjct: 20 IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMIRRG 75
Query: 116 LSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
L P+ TY S+I LC L +A KV S +T+N I Y + RV+ +
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQARKVS---------KSCSTFNTLINGYCKATRVKDGM 126
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
+F M RG+ ++++Y +I F Q G+ AL+I E V G+ +T+ ++ L
Sbjct: 127 NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQL 186
Query: 235 CLQGSLPEAFDLFLE 249
C + L +A + L+
Sbjct: 187 CSRKELRKAVAMLLQ 201
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 141 VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC 200
+F M S A YN I + + ++A IF+ + GL PD+ +YN +I +F
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-RFS 59
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
G EK + AE + +G++PD +TY+++I LC Q L +A VS S S
Sbjct: 60 SLGRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
T+ L+ YC +L EM RG + + ++T+ LIHG + +
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVAN--------VITYTTLIHGFRQVGDFNT 159
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVE 362
AL I + M G+ ++++ +L C +EL+KA + ++
Sbjct: 160 ALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 15/208 (7%)
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
+V+RE N + D YN +I G+CK A ++ + + GL P+ +TY +I
Sbjct: 3 KVMRESN---MDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF- 58
Query: 131 CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
L +A K++ EMI G +P TYN I ++ QA R +S
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA---------RKVSKSCS 107
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
++N +I+ +C+ ++ + + E +GI+ + +TY+ LI G A D+F EM
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMA 278
+ V S+ T+ ++ C E A
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKA 195
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
+F M E + D YN +I C+ G+ ++A I + G+ PD TY+ +I+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
SL A L+ EM+R + P TY +++ C + + A
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQAR---------------- 100
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
+ S S TFN LI+G C RV + + + M G+ + ++Y T++ GF Q+ +
Sbjct: 101 -KVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNT 159
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGL 382
A ++ EM ++ T+ ++ L
Sbjct: 160 ALDIFQEMVSNGVYSSSITFRDILPQL 186
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 34/201 (16%)
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
D Y+ +I LC G EA ++F +L + P TY +M + +G A L+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN-MMIRFSSLGR---AEKLY 68
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
EM RG +PD +T+N++IHGLC ++ +A + S ++NT
Sbjct: 69 AEMIRRGLVPD--------TITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNT 111
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ G+C+ +K L EM + I +++ +TY++L++ + G+
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGI-------------VANVITYTTLIHGFRQVGDFN 158
Query: 403 KVFKLEREMTRNGYLPDSVTL 423
+ +EM NG S+T
Sbjct: 159 TALDIFQEMVSNGVYSSSITF 179
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+N +IHGLC + DEA I + GL PD +YN ++ + L +A +L EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 365 EKIIWLDEYTYESLMEGLSDE-------------VTYSSLLNDYFAQGNMQKVFKLEREM 411
+ + D TY S++ GL + T+++L+N Y ++ L EM
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKATRVKDGMNLFCEM 132
Query: 412 TRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVE 471
R G + + +T I+G + + A I M+S+ + S D L + CS E
Sbjct: 133 YRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYS-SSITFRDILPQLCSRKE 191
Query: 472 FKSAVGLV 479
+ AV ++
Sbjct: 192 LRKAVAML 199
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 138/313 (44%), Gaps = 23/313 (7%)
Query: 24 FATESVMSCKEKKVG---ETF-GLLRMEPYLV-------SFKGVIKELCEKERMEEAKEV 72
F + S++ CK K G ET ++ME + F +++ C + M+EA+ +
Sbjct: 139 FKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSI 198
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT 132
+++ + PD +T N L+ G + ++ Y +M RG PN TY ID C
Sbjct: 199 FEKLHSR-FNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCK 257
Query: 133 WW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+A ++F +M F +V I + +A +F +++RGL+PD +
Sbjct: 258 KRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGA 317
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL--CLQGSLPEAFDLFLE 249
YNA++S + G++ A+++ E EKGI PD VT+ ++ + + + + +
Sbjct: 318 YNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQK 377
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
M + P T LM +C GE ++ L M +G + P L
Sbjct: 378 MKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG--------YCPHGHALELLT 429
Query: 310 HGLCSLERVDEAL 322
LC+ R ++A
Sbjct: 430 TALCARRRANDAF 442
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 143/369 (38%), Gaps = 47/369 (12%)
Query: 177 FSAMAE-RGLSPDLVSYNA---VISKFCQDGELEKALE----IKAETVEKGILPDDVTYS 228
++ MAE R P+L+S+ + ++ K + G E+ LE ++ E K D+ ++
Sbjct: 123 WALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDE--FN 180
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
L++A C + + EA +F E L +P T L+ + G+ + + EM R
Sbjct: 181 ILLRAFCTEREMKEARSIF-EKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKR 239
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
GF P+ VT+ I G C EAL + M + T++ G
Sbjct: 240 GF--------KPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSG 291
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLE 408
R KA +L E+ ++ + D Y +LM SSL+ G++ K+
Sbjct: 292 VARNKIKARQLFDEISKRGLTPDCGAYNALM---------SSLMK----CGDVSGAIKVM 338
Query: 409 REMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCS 468
+EM G PDSVT G+ K + C Y Y + E
Sbjct: 339 KEMEEKGIEPDSVTFHSMFIGMMKSKEFGF---------NGVC----EY--YQKMKERSL 383
Query: 469 YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYE 528
+ + V L+K F G VN + M P G LL C R N A+E
Sbjct: 384 VPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFE 443
Query: 529 MYKEMVHYG 537
+ V G
Sbjct: 444 CSWQTVERG 452
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 159/348 (45%), Gaps = 38/348 (10%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F +IK + + ++ A V+R++ +G+ T NALI + + R ++Y
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMY---- 220
Query: 113 VRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQ 172
R L D+ +D+A K+ ++ P+ T+N + ++ E
Sbjct: 221 --------REVFGLDDV----SVDEAKKMIGKI-----KPNATTFNSMMVSFYREGETEM 263
Query: 173 ALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI 231
I+ M E G SP++ SYN ++ +C G + +A ++ E +G++ D V Y+ +I
Sbjct: 264 VERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMI 323
Query: 232 QALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
LC + +A +LF +M + + TY L+ YC G+ ++ EM+ +GF
Sbjct: 324 GGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFE 383
Query: 292 PDFVIQFSPSLVTFNALIHGLC---SLERVDEALGILR-GMPEMGLSPDAVSYNTVLFGF 347
D +T AL+ GLC +RV EA I++ + E P Y ++
Sbjct: 384 ADG--------LTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRL 435
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG---LSDEVTYSSLL 392
C+ ++ +A ++ EM K + TY + ++G + DE T S+LL
Sbjct: 436 CEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEET-SALL 482
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 6/247 (2%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRK-GLAPDCETYNALICGMCKVRNMLC 103
+++P +F ++ + E + + REM + G +P+ +YN L+ C M
Sbjct: 240 KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSE 299
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
A +++++M+VRG+ + Y ++I LC+ + + KA ++F +M G + TY +
Sbjct: 300 AEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVN 359
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE----IKAETVEK 218
Y + V+ L ++ M +G D ++ A++ C D + ++ +E +K E
Sbjct: 360 GYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREA 419
Query: 219 GILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMA 278
P Y L++ LC G + A ++ EM+ PS TY + Y +VG+ +
Sbjct: 420 MFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETS 479
Query: 279 FHLHDEM 285
L EM
Sbjct: 480 ALLAIEM 486
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 146/338 (43%), Gaps = 54/338 (15%)
Query: 136 DKAYKVFNEMIAS----GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
D+ KVF +I S G P V ++ I + L S+ ++ A+ + + RG++ + +
Sbjct: 142 DRVLKVFRSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQIST 199
Query: 192 YNAVISKFCQDGELEKALEI-------------KAETVEKGILPDDVTYSALIQALCLQG 238
NA+I++ + ++ +A+ + I P+ T+++++ + +G
Sbjct: 200 CNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREG 259
Query: 239 SLPEAFDLFLEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQ 297
++ EM SP+ +Y LM AYC G S A + +EM+ RG + D
Sbjct: 260 ETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYD---- 315
Query: 298 FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
+V +N +I GLCS V +A + R M G+ ++Y ++ G+C+ ++
Sbjct: 316 ----IVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGL 371
Query: 358 ELKVEMDEKIIWLDEYTYESLMEGLSDE------VTYSSLLNDYFAQ------------- 398
+ EM K D T E+L+EGL D+ V + ++ D +
Sbjct: 372 VVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELL 431
Query: 399 -------GNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
G M + ++ EM G+ P T FI+G
Sbjct: 432 VKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 130/313 (41%), Gaps = 32/313 (10%)
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
F+ LI + +D A+ ++R + G++ + N ++ + R Y++ E
Sbjct: 165 FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYRE-- 222
Query: 365 EKIIWLDEYTYESLMEGLS----DEVTYSSLLNDYFAQGNMQKVFKLEREMTRN-GYLPD 419
+ LD+ + + + + + T++S++ ++ +G + V ++ REM G P+
Sbjct: 223 --VFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPN 280
Query: 420 SVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGL 478
+ V + + S A+ + M + + Y+T+I CS E A L
Sbjct: 281 VYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVY--DIVAYNTMIGGLCSNFEVVKAKEL 338
Query: 479 VKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
+D +G ++ Y L+ +C+ G+V+ +Y+EM GF
Sbjct: 339 FRDMGLKG----------------IECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGF 382
Query: 539 FPHMFSVLSLIHALYYDRKNS---EMGWVIRNTLRSCNLNDSE-LHQVLNEIEVKKCKID 594
++ +L+ L DR E ++++ +R S +++L + + K+D
Sbjct: 383 EADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMD 442
Query: 595 ALLNALAKIAVDG 607
LN A++ G
Sbjct: 443 RALNIQAEMVGKG 455
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 123/512 (24%), Positives = 201/512 (39%), Gaps = 80/512 (15%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P LV+F E + + E +++ + +N LI K +
Sbjct: 82 PKLVTFYSAFNLHNEAQSIIENSDILHPL----------PWNVLIASYAKNELFEEVIAA 131
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYK--VFNEMIASGFLPSVATYNKFITAYL 165
Y +M +G+ P+ TY S++ C LD A+ V + S + S+ N I+ Y
Sbjct: 132 YKRMVSKGIRPDAFTYPSVLKA-CGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYK 190
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ A +F M ER D VS+NAVI+ + +G +A E+ + G+ +
Sbjct: 191 RFRNMGIARRLFDRMFER----DAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVI 246
Query: 226 TYSALIQALCLQ-GSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
T++ +I CLQ G+ A L M S + A L+G + +H
Sbjct: 247 TWN-IISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGL 305
Query: 285 MRHRGF-------------------LPDFVIQFSP----SLVTFNALIHGLCSLERVDEA 321
H + L +I F SL T+N++I G L + +EA
Sbjct: 306 AIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEA 365
Query: 322 LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL-------KVEMDEKIIW---LD 371
+LR M G P++++ ++L +I L+ E K D ++W +D
Sbjct: 366 SHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVD 425
Query: 372 EYTYE---------SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVT 422
Y S + DEVTY+SL++ Y QG L +EMTR+G PD VT
Sbjct: 426 VYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVT 485
Query: 423 LGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDF 482
+ ++ + + + ++M QC Y I L V+ G +
Sbjct: 486 VVAVLSACSHSKLVHEGERLFMKM---QC----EYGIRPCLQHFSCMVDLYGRAGFL--- 535
Query: 483 STRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
A A + +HNM KP GA + L+
Sbjct: 536 ---------AKAKDIIHNMPYKPSGATWATLL 558
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 150/395 (37%), Gaps = 39/395 (9%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
VS+ VI + EA E+ +M G+ T+N + G + N + A+ L +
Sbjct: 211 VSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISR 270
Query: 111 MRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEM----IASGFLPSVATYNKFITAYLS 166
MR P +++I L L A ++ E+ I S + N IT Y
Sbjct: 271 MRNF---PTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSK 327
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+ + AL +F E L ++N++IS + Q + E+A + E + G P+ +T
Sbjct: 328 CKDLRHALIVFRQTEEN----SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSIT 383
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST-YTRLMYAYCLVGEFSMAFHLHDEM 285
++++ +L + +LR + + L+ Y G+ A + D M
Sbjct: 384 LASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLM 443
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
R VT+ +LI G + AL + + M G+ PD V+ VL
Sbjct: 444 SKR------------DEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLS 491
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVF 405
+ + + L ++M EY ++ +S +++ Y G + K
Sbjct: 492 ACSHSKLVHEGERLFMKMQ------CEYGIRPCLQ------HFSCMVDLYGRAGFLAKAK 539
Query: 406 KLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAK 440
+ M Y P T +N + T I K
Sbjct: 540 DIIHNMP---YKPSGATWATLLNACHIHGNTQIGK 571
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 156/350 (44%), Gaps = 55/350 (15%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
L S+ ++ + +++A ++ EM GL PD T+N+L+ G A+ +
Sbjct: 155 LSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLK 214
Query: 110 QMRVRGLSPNERTYMSLIDLLCT---WWLDKA-----------YKVFNEM------IASG 149
+M++ GL P+ + SL+ + L KA Y V+ E I +G
Sbjct: 215 RMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTG 274
Query: 150 FLP------------SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
+LP ++ +N ++ + ++ A + M + G+ PD +++N++ S
Sbjct: 275 YLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLAS 334
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
+ G+ EKAL++ + EKG+ P+ V+++A+ G+ A +F++M V P
Sbjct: 335 GYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGP 394
Query: 258 SNSTYTRLM---------------YAYC----LVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
+ +T + L+ + +C L+ + +A L D G L + F
Sbjct: 395 NAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF 454
Query: 299 ----SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
+ SL ++N ++ G R +E + M E G+ PDA+++ +VL
Sbjct: 455 WGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVL 504
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 144/323 (44%), Gaps = 16/323 (4%)
Query: 59 ELCE-KERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLS 117
++C KE E +++ + R GL + N+LI + + + ++++ M+ R LS
Sbjct: 97 QVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS 156
Query: 118 PNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIF 177
S L ++D A + +EM G P + T+N ++ Y S + A+ +
Sbjct: 157 SWNSILSSYTKLG---YVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 178 SAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQ 237
M GL P S ++++ + G L+ I + + D + LI
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 238 GSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQ 297
G LP A +F M ++ NS + L YA CL+ + A L M G PD
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYA-CLLKD---AEALMIRMEKEGIKPD---- 325
Query: 298 FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
+T+N+L G +L + ++AL ++ M E G++P+ VS+ + G + + A
Sbjct: 326 ----AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 381
Query: 358 ELKVEMDEKIIWLDEYTYESLME 380
++ ++M E+ + + T +L++
Sbjct: 382 KVFIKMQEEGVGPNAATMSTLLK 404
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/383 (20%), Positives = 172/383 (44%), Gaps = 45/383 (11%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A ++ EM ++ D +N ++ + N AVEL+ +M+ G + T + L+
Sbjct: 42 ANKLFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ 97
Query: 129 LLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
+ + ++ ++ G +V+ N I Y + ++E + +F++M +R LS
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS- 156
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
S+N+++S + + G ++ A+ + E G+ PD VT+++L+ +G +A +
Sbjct: 157 ---SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH-------------------DEMRHR 288
M + PS S+ + L+ A G + +H D
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 289 GFLPDFVIQF----SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
G+LP + F + ++V +N+L+ GL + +A ++ M + G+ PDA+++N++
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
G+ + + +KA ++ +M EK + + ++ ++ G S GN +
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCS-------------KNGNFRNA 380
Query: 405 FKLEREMTRNGYLPDSVTLGVFI 427
K+ +M G P++ T+ +
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLL 403
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 96/500 (19%), Positives = 192/500 (38%), Gaps = 101/500 (20%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVV 73
+V N ++ G+A++ +S V + + ++P S +++ + E ++ K +
Sbjct: 190 IVTWNSLLSGYASKG-LSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 74 REMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW 133
+ R L D LI K + A ++D M + + + +S + C
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVA-WNSLVSGLSYACL- 306
Query: 134 WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
L A + M G P T+N + Y + + E+AL + M E+G++P++VS+
Sbjct: 307 -LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL---------------CLQG 238
A+ S ++G AL++ + E+G+ P+ T S L++ L CL+
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 239 SL-------PEAFDLF---------LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
+L D++ +E+ G + S +++ ++ Y + G
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 283 DEMRHRGFLPDFVIQFS----------------------------PSLVTFNALIHGLCS 314
M G PD + S P++ + ++ L
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI-RELKKA----------------- 356
+DEA ++ M L PDA + L C+I R+L+ A
Sbjct: 546 SGYLDEAWDFIQ---TMSLKPDATIWGAFLSS-CKIHRDLELAEIAWKRLQVLEPHNSAN 601
Query: 357 YELKVEMDEKI-IWLDEYTYESLM-------EGLSDEVTYSSLLNDYFAQGNMQ------ 402
Y + + + + W D +LM + L + ++ ++A+G
Sbjct: 602 YMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDI 661
Query: 403 --KVFKLEREMTRNGYLPDS 420
+++KL EM ++GY+PD+
Sbjct: 662 YFELYKLVSEMKKSGYVPDT 681
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/384 (20%), Positives = 159/384 (41%), Gaps = 29/384 (7%)
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
+F M +R D +++N ++ + G EKA+E+ E G D T L+Q
Sbjct: 45 LFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCS 100
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
+ E + +LR + + S L+ Y G+ ++ + + M+ R
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR------- 153
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
+L ++N+++ L VD+A+G+L M GL PD V++N++L G+ K
Sbjct: 154 -----NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD 208
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLSD--EVTYSSLLNDYFAQGNMQKVFKLEREM-- 411
A + M + + SL++ +++ + ++ Y + + +E +
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLID 268
Query: 412 --TRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSY 469
+ GYLP + + ++ N A S+ G +S CL + + + +
Sbjct: 269 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG-----LSYACLLKDAEALMIRMEKEGIK 323
Query: 470 VEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHC-RRGNVNKAYE 528
+ + L ++T G +A +M V P+ V IF C + GN A +
Sbjct: 324 PDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN-VVSWTAIFSGCSKNGNFRNALK 382
Query: 529 MYKEMVHYGFFPHMFSVLSLIHAL 552
++ +M G P+ ++ +L+ L
Sbjct: 383 VFIKMQEEGVGPNAATMSTLLKIL 406
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/531 (22%), Positives = 226/531 (42%), Gaps = 79/531 (14%)
Query: 51 VSFKGVIKELCEKER---MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
+ F+ KEL + R + EA+++ ++ A + T+N +I G K R M A +L
Sbjct: 38 LGFRATNKELNQMIRSGYIAEARDIFEKLE----ARNTVTWNTMISGYVKRREMNQARKL 93
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
+D M R + + +L++A K+F+EM + ++N I+ Y +
Sbjct: 94 FDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSF----SWNTMISGYAKN 149
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
R+ +AL +F M ER + VS++A+I+ FCQ+GE++ A+ + K + D
Sbjct: 150 RRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVL----FRKMPVKDSSPL 201
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS---TYTRLMYAYCLVGEFSMAFHLHDE 284
AL+ L L EA L VS Y L+ Y G+ A L D+
Sbjct: 202 CALVAGLIKNERLSEA-AWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQ 260
Query: 285 M------RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAV 338
+ H G +F +F ++V++N++I + V A + M + D +
Sbjct: 261 IPDLCGDDHGG---EFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTI 313
Query: 339 SYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSD-------------- 384
S+NT++ G+ + ++ A+ L EM + D +++ ++ G +
Sbjct: 314 SWNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKT 369
Query: 385 ----EVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAK 440
V+++S++ Y + ++ L M G PD TL ++ A+T +
Sbjct: 370 PEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS-----ASTGL-- 422
Query: 441 GILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHN 500
+ LR+ + +I D + N L+ +S G + E +
Sbjct: 423 -VNLRLGMQMHQIVVKTVIPDVPVHN----------ALITMYSRCGEIME---SRRIFDE 468
Query: 501 MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
M +K + +N +I + GN ++A ++ M G +P + +S+++A
Sbjct: 469 MKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 130/315 (41%), Gaps = 29/315 (9%)
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
E+ R K ++N++I K ++ AV+L+ +M + G P+ T SL+
Sbjct: 360 ELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAS 419
Query: 131 CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
+ ++++ +P V +N IT Y + ++ IF M L +++
Sbjct: 420 TGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK---LKREVI 476
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
++NA+I + G +AL + GI P +T+ +++ A G + EA F+ M
Sbjct: 477 TWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSM 536
Query: 251 LRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
+ + P Y+ L+ G+F A ++ M F P + AL+
Sbjct: 537 MSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM-----------PFEPDKTVWGALL 585
Query: 310 HGLCSLERVDEALGILRGMPEM--GLSPDAVSYNTVLFG-FCQIRELKKAYELKVEMDEK 366
R+ +G+ E L P++ + +L+ + + +A ++++ M+ K
Sbjct: 586 DAC----RIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESK 641
Query: 367 II-------WLDEYT 374
I W+D T
Sbjct: 642 RIKKERGSSWVDSST 656
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 112/540 (20%), Positives = 205/540 (37%), Gaps = 116/540 (21%)
Query: 12 RHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEP--YLVSFKGVIKELCEKERMEEA 69
R N MI G+A K +++GE L P VS+ +I C+ ++ A
Sbjct: 134 RDSFSWNTMISGYA-------KNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSA 186
Query: 70 KEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL 129
+ R+M K +P C AL+ G+ K + A + Q Y SL+
Sbjct: 187 VVLFRKMPVKDSSPLC----ALVAGLIKNERLSEAAWVLGQ------------YGSLV-- 228
Query: 130 LCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE------- 182
SG V YN I Y +VE A +F + +
Sbjct: 229 ------------------SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHG 270
Query: 183 ----RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG 238
++VS+N++I + + G++ A + + ++ D ++++ +I
Sbjct: 271 GEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVS 326
Query: 239 SLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
+ +AF LF EM D ++ ++ Y VG +A H ++ +
Sbjct: 327 RMEDAFALFSEMPNRDAH----SWNMMVSGYASVGNVELARHYFEKTPEK---------- 372
Query: 299 SPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
V++N++I + EA+ + M G PD + ++L + L+ +
Sbjct: 373 --HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ 430
Query: 359 LKVEMDEKIIWLDEYTYESLMEGLS------------DE-------VTYSSLLNDYFAQG 399
+ ++ K + D + +L+ S DE +T+++++ Y G
Sbjct: 431 MH-QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHG 489
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
N + L M NG P +T F++ LN + A L+ +Q ++M S
Sbjct: 490 NASEALNLFGSMKSNGIYPSHIT---FVSVLN-----ACAHAGLVDEAKAQFVSMMSVYK 541
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
+ +E+ S LV S +G EA + +M +PD V+ L+ D CR
Sbjct: 542 IEPQMEHYS--------SLVNVTSGQGQFEEAMYI---ITSMPFEPDKTVWGALL-DACR 589
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 13/211 (6%)
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC-QDGEL 205
+SG+ + + I Y ++ E+ L F M E +P N ++ G L
Sbjct: 112 SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYL 171
Query: 206 EKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRL 265
+KA E+ + G++P+ +Y+ L+QA CL L A+ LF +ML DV P +Y L
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 266 MYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL 325
+ +C G+ + A L D+M ++GF+PD LI GLC DE L
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPD------------RTLIGGLCDQGMFDEGKKYL 279
Query: 326 RGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
M G SP N ++ GFC ++++A
Sbjct: 280 EEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Query: 117 SPNERTYMSLIDLLCTW--WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
+P + ++D+L + +L KA+++F G +P+ +YN + A+ ++ + A
Sbjct: 151 TPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAY 210
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
+F M ER + PD+ SY +I FC+ G++ A+E+ + + KG +PD LI L
Sbjct: 211 QLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGL 266
Query: 235 CLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMA 278
C QG E EM+ SP S L+ +C G+ A
Sbjct: 267 CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEA 310
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P S+ +++ C + + A ++ +M + + PD ++Y LI G C+ + A+EL
Sbjct: 188 PNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMEL 247
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
D M +G P+ +LI LC + D+ K EMI+ GF P + N + + S
Sbjct: 248 LDDMLNKGFVPDR----TLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCS 303
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEK 207
+VE+A + + + G + ++ VI C + E EK
Sbjct: 304 FGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEK 344
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
+++A E+ + G+ P+ +YN L+ C ++ A +L+ +M R + P+ +Y
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 126 LIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
LI C ++ A ++ ++M+ GF+P I ++ M +G
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKG 286
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
SP N ++ FC G++E+A ++ ++ G T+ +I +C + E
Sbjct: 287 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE-SEKI 345
Query: 245 DLFLE 249
LFLE
Sbjct: 346 KLFLE 350
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/531 (22%), Positives = 207/531 (38%), Gaps = 81/531 (15%)
Query: 84 DCETYNALICGMCKVRNMLCAVELYDQMRVRG------LSPNERTYMSLIDLLCTWWLDK 137
D +YN I G ++ A+ L+ +M+ R P+ TY SLI +LC + K
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 138 -AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A V++E+ SG P +TY I S R++ A+ I+ M G PD + YN ++
Sbjct: 307 DALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLL 366
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ ++ +A ++ + V++G+ TY+ LI L G F LF ++ +
Sbjct: 367 DGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQF 426
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
T++ + C G+ A L +EM RG FS LVT ++L+ G
Sbjct: 427 VDAITFSIVGLQLCREGKLEGAVKLVEEMETRG--------FSVDLVTISSLLIGFHKQG 478
Query: 317 RVDEALGILRGMPEMGLSPDAVSYN-----------------TVLF----GFCQI----- 350
R D +++ + E L P+ + +N T +F F I
Sbjct: 479 RWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVG 538
Query: 351 RELKKAYELKVEMDEKIIW-----LDEYTYE--------SLMEGLSDEVTYSS------- 390
E A +V E W +D+ ++ L G E S
Sbjct: 539 SEDDGASAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMN 598
Query: 391 -LLNDYFAQGNMQKVFKLEREMTRNGYLP-DSVTLGVFINGLNKKATTSIAKGILLRMIS 448
L+ Y ++G++ KL G S T ++ KK A+G+L +M
Sbjct: 599 TFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFE 658
Query: 449 SQCLT-MPSY-----------------IIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNE 490
+ C + +Y + D L + Y++ L+ ++E
Sbjct: 659 NFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDE 718
Query: 491 AAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPH 541
A + M + + PD YN +I + + G + +AY+ K M+ G P+
Sbjct: 719 ATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 161/414 (38%), Gaps = 53/414 (12%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
++ + + +C + E +++ M G+ D L+ + + A+ + D
Sbjct: 93 TAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDY 152
Query: 111 MRVRGLSPNERTYMS-LIDLLCTWWLDKAYKVF---------------NEMIASGFLPSV 154
M G N Y S LI L+ L A + +I +LP
Sbjct: 153 MEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGT 212
Query: 155 ATYNKFITAYLSSERVEQALGIFSAM-AERGLSPDLVSYNAVISKFCQDGELEKALEIKA 213
N+ + ++ + +F + + D SYN I F G+L+ AL +
Sbjct: 213 VAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFK 272
Query: 214 ETVEKGIL------PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
E E+ + PD TY++LI LCL G +A ++ E+ P NSTY L+
Sbjct: 273 EMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQ 332
Query: 268 AYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
C A ++ EM++ GF+PD ++ +N L+ G +V EA +
Sbjct: 333 GCCKSYRMDDAMRIYGEMQYNGFVPDTIV--------YNCLLDGTLKARKVTEACQLFEK 384
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY---------ESL 378
M + G+ +YN ++ G + + + L ++ +K ++D T+ E
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 379 MEGLS-------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
+EG D VT SSLL + QG KL + + +P+
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPN 498
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 169/454 (37%), Gaps = 71/454 (15%)
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
G+ S Y++ + + + + +M E G++ D ++ + G+ E A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
L + E G + Y +++ AL + L A + ++L + S+ R++
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDF---------VIQFSPSLVTFNALIHGLCSLERVD 319
L G ++ L +R +F + +F ++N IHG +D
Sbjct: 207 SYLPGTVAVN-ELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLD 265
Query: 320 EALGILRGMPEMG------LSPDAVSYNTVLFGFCQIRELKKAY----ELKVEMDEKIIW 369
AL + + M E PD +YN+++ C + K A ELKV E
Sbjct: 266 AALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEP--- 322
Query: 370 LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
D TY L++G M ++ EM NG++PD++ ++G
Sbjct: 323 -DNSTYRILIQGCCKSY-------------RMDDAMRIYGEMQYNGFVPDTIVYNCLLDG 368
Query: 430 LNKKATTSIAKGILLRMIS----SQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTR 485
K + A + +M+ + C T I+ D L N ++ L D +
Sbjct: 369 TLKARKVTEACQLFEKMVQEGVRASCWTY--NILIDGLFRNG---RAEAGFTLFCDLKKK 423
Query: 486 GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSV 545
G D ++++ CR G + A ++ +EM GF + ++
Sbjct: 424 GQF----------------VDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTI 467
Query: 546 LSLIHALY----YDRKNSEM-----GWVIRNTLR 570
SL+ + +D K M G ++ N LR
Sbjct: 468 SSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLR 501
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
K +++FN M + + TYN +++++ + A G+ M E + D+ +YN +I
Sbjct: 615 KLFEIFNGMGVTDL--TSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVII 672
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ G + A + ++G D V Y+ LI AL L EA LF M ++
Sbjct: 673 QGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGIN 732
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
P +Y ++ G+ A+ M G LP+ V
Sbjct: 733 PDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHV 771
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 106 ELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E+++ M V L+ TY S++ + + A V ++M + +ATYN I
Sbjct: 618 EIFNGMGVTDLT--SYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGL 675
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
R + A + + ++G D+V YN +I+ + L++A ++ GI PD
Sbjct: 676 GKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDV 735
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
V+Y+ +I+ G L EA+ ML P++ T T L Y
Sbjct: 736 VSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDY 778
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 157/352 (44%), Gaps = 35/352 (9%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL----YDQM 111
++K LC+ R + A +V +EMN +G PD ++Y L+ G C + A L + ++
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL--SSE 168
+G + Y L+D LC +D A ++ +++ G Y+ + SSE
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE 277
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
+E+ + + RG P L SY+A+ + ++G+L + E+ KG P Y
Sbjct: 278 GIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYG 337
Query: 229 ALIQALCLQGSLPEAFDLF-LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
A ++ALC G L EA + EM++G P+ Y L+ C G+ M
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK---------SMEA 388
Query: 288 RGFLPDFVIQFS--PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
G+L Q S + T+ L+ GLC + EA ++ M P +Y+ ++
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYE------SLMEGLSDEVTYSSL 391
G C ++ + Y E ++WL+E + S+ + L++ V + ++
Sbjct: 449 GLC---DMDRRY-------EAVMWLEEMVSQDMVPESSVWKALAESVCFCAI 490
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 199/481 (41%), Gaps = 51/481 (10%)
Query: 97 KVRNMLCAVELYDQMRVR--GLSPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLP 152
K +N + A++L+++ + R N Y ++ID+L L+ Y V M
Sbjct: 21 KQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKY-VIERMKEDSCEC 79
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
+ + I + + R+E A+ +F ++ E +S++ ++ + ++ ELE A I
Sbjct: 80 KDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF 139
Query: 213 AETVEKGILPDDVT-YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
+ + +T + L++ LC A +F EM P +Y LM +CL
Sbjct: 140 RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL 199
Query: 272 VGEFSMAFHLHDEM----RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
G+ A HL M +G D V+ + L+ LC VD+A+ IL
Sbjct: 200 EGKLEEATHLLYSMFWRISQKGSGEDIVV--------YRILLDALCDAGEVDDAIEILGK 251
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV- 386
+ GL Y+ + G +E E E++ L E+L+ G +
Sbjct: 252 ILRKGLKAPKRCYHHIEAGH---------WESSSEGIERVKRL---LTETLIRGAIPCLD 299
Query: 387 TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR- 445
+YS++ D F +G + + ++ M G+ P G + L + A ++ +
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 446 MISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVK 504
M+ CL P+ +Y+ LI+ C + AVG +K S + + +A+E
Sbjct: 360 MMQGHCL--PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ----VSCVANEE------- 406
Query: 505 PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALY-YDRKNSEMGW 563
Y L+ CR G +A ++ +EM+ FP + + +I L DR+ + W
Sbjct: 407 ----TYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMW 462
Query: 564 V 564
+
Sbjct: 463 L 463
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 142/343 (41%), Gaps = 61/343 (17%)
Query: 19 VMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKG----------VIKELCEKERMEE 68
++++GF C E K+ E LL + +S KG ++ LC+ +++
Sbjct: 192 ILMKGF-------CLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A E++ ++ RKGL Y+ + G + S +E
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWE-------------------SSSEG------- 278
Query: 129 LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
+++ ++ E + G +P + +Y+ T ++ + + AM +G P
Sbjct: 279 ------IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 189 LVSYNAVISKFCQDGELEKALE-IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
Y A + C+ G+L++A+ I E ++ LP Y+ LI+ LC G EA +
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG-Y 391
Query: 248 LEMLRGDVS--PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
L+ + VS + TY L+ C G+F A + +EM + P + T+
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM--------LIKSHFPGVETY 443
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
+ +I GLC ++R EA+ L M + P++ + + C
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 157/352 (44%), Gaps = 35/352 (9%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL----YDQM 111
++K LC+ R + A +V +EMN +G PD ++Y L+ G C + A L + ++
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL--SSE 168
+G + Y L+D LC +D A ++ +++ G Y+ + SSE
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSE 277
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
+E+ + + RG P L SY+A+ + ++G+L + E+ KG P Y
Sbjct: 278 GIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYG 337
Query: 229 ALIQALCLQGSLPEAFDLF-LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
A ++ALC G L EA + EM++G P+ Y L+ C G+ M
Sbjct: 338 AKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGK---------SMEA 388
Query: 288 RGFLPDFVIQFS--PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
G+L Q S + T+ L+ GLC + EA ++ M P +Y+ ++
Sbjct: 389 VGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIK 448
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYE------SLMEGLSDEVTYSSL 391
G C ++ + Y E ++WL+E + S+ + L++ V + ++
Sbjct: 449 GLC---DMDRRY-------EAVMWLEEMVSQDMVPESSVWKALAESVCFCAI 490
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 108/481 (22%), Positives = 199/481 (41%), Gaps = 51/481 (10%)
Query: 97 KVRNMLCAVELYDQMRVR--GLSPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLP 152
K +N + A++L+++ + R N Y ++ID+L L+ Y V M
Sbjct: 21 KQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKY-VIERMKEDSCEC 79
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
+ + I + + R+E A+ +F ++ E +S++ ++ + ++ ELE A I
Sbjct: 80 KDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIF 139
Query: 213 AETVEKGILPDDVT-YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
+ + +T + L++ LC A +F EM P +Y LM +CL
Sbjct: 140 RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCL 199
Query: 272 VGEFSMAFHLHDEM----RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRG 327
G+ A HL M +G D V+ + L+ LC VD+A+ IL
Sbjct: 200 EGKLEEATHLLYSMFWRISQKGSGEDIVV--------YRILLDALCDAGEVDDAIEILGK 251
Query: 328 MPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEV- 386
+ GL Y+ + G +E E E++ L E+L+ G +
Sbjct: 252 ILRKGLKAPKRCYHHIEAGH---------WESSSEGIERVKRL---LTETLIRGAIPCLD 299
Query: 387 TYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR- 445
+YS++ D F +G + + ++ M G+ P G + L + A ++ +
Sbjct: 300 SYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKE 359
Query: 446 MISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVK 504
M+ CL P+ +Y+ LI+ C + AVG +K S + + +A+E
Sbjct: 360 MMQGHCL--PTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQ----VSCVANEE------- 406
Query: 505 PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALY-YDRKNSEMGW 563
Y L+ CR G +A ++ +EM+ FP + + +I L DR+ + W
Sbjct: 407 ----TYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMW 462
Query: 564 V 564
+
Sbjct: 463 L 463
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 142/343 (41%), Gaps = 61/343 (17%)
Query: 19 VMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKG----------VIKELCEKERMEE 68
++++GF C E K+ E LL + +S KG ++ LC+ +++
Sbjct: 192 ILMKGF-------CLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDD 244
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A E++ ++ RKGL Y+ + G + S +E
Sbjct: 245 AIEILGKILRKGLKAPKRCYHHIEAGHWE-------------------SSSEG------- 278
Query: 129 LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
+++ ++ E + G +P + +Y+ T ++ + + AM +G P
Sbjct: 279 ------IERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPT 332
Query: 189 LVSYNAVISKFCQDGELEKALE-IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
Y A + C+ G+L++A+ I E ++ LP Y+ LI+ LC G EA +
Sbjct: 333 PFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVG-Y 391
Query: 248 LEMLRGDVS--PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
L+ + VS + TY L+ C G+F A + +EM + P + T+
Sbjct: 392 LKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEM--------LIKSHFPGVETY 443
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
+ +I GLC ++R EA+ L M + P++ + + C
Sbjct: 444 HMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 15/301 (4%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++S+ +++ + A+ + R M G P TY ++ + A E+
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 231
Query: 108 YDQM---RVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
++ + + L P+++ Y +I + +KA KVF+ M+ G S TYN ++
Sbjct: 232 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 291
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
S + V + I+ M + PD+VSY +I + + E+AL + E ++ G+ P
Sbjct: 292 ETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 348
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
Y+ L+ A + G + +A +F M R + P +YT ++ AY + A
Sbjct: 349 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 408
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
++ G F P++VT+ LI G V++ + + M G+ + T+
Sbjct: 409 RIKVDG--------FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 460
Query: 344 L 344
+
Sbjct: 461 M 461
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 36/283 (12%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREM---NRKGLAPDCETYNALICGMCKVRNMLC 103
EP ++++ ++K E ++ +EA+EV + + L PD + Y+ +I K N
Sbjct: 206 EPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEK 265
Query: 104 AVELYDQMRVRGLSPNERTYMSLI-----------------------DLLCTWWLDKAY- 139
A +++ M +G+ + TY SL+ D++ L KAY
Sbjct: 266 ARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG 325
Query: 140 ---------KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
VF EM+ +G P+ YN + A+ S VEQA +F +M + PDL
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
SY ++S + ++E A + G P+ VTY LI+ + + +++ +M
Sbjct: 386 SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
+ + + T +M A F A + EM G PD
Sbjct: 446 RLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 488
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 133/299 (44%), Gaps = 15/299 (5%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A+ V+ +++ G P+ +Y AL+ + A ++ +M+ G P+ TY ++
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 129 LLCTW-WLDKAYKVFNEMI---ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
+A +VF ++ S P Y+ I Y + E+A +FS+M +G
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
+ V+YN+++S E+ K I + I PD V+Y+ LI+A EA
Sbjct: 278 VPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 334
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+F EML V P++ Y L+ A+ + G A + MR PD L +
Sbjct: 335 SVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD--------LWS 386
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+ ++ + ++ A + + G P+ V+Y T++ G+ + +++K E+ +M
Sbjct: 387 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 122/298 (40%), Gaps = 27/298 (9%)
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A +V + + G P+V +Y + +Y + A IF M G P ++Y ++
Sbjct: 158 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 217
Query: 198 KFCQDG---ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
F + E E+ E + + + PD Y +I G+ +A +F M+
Sbjct: 218 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 277
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
V S TY LM E S ++D+M+ PD +V++ LI
Sbjct: 278 VPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPD--------VVSYALLIKAYGR 326
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
R +EAL + M + G+ P +YN +L F +++A + M I+ D +
Sbjct: 327 ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW- 385
Query: 375 YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNK 432
+Y+++L+ Y +M+ K + + +G+ P+ VT G I G K
Sbjct: 386 ------------SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK 431
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
+E ++ +M R + PD +Y LI + R A+ ++++M G+ P + Y L
Sbjct: 296 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 355
Query: 127 IDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
+D + +++A VF M P + +Y ++AY+++ +E A F + G
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
P++V+Y +I + + ++EK +E+ + GI + + ++ A + A
Sbjct: 416 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 475
Query: 246 LFLEMLRGDVSPSNSTYTRLM 266
+ EM V P L+
Sbjct: 476 WYKEMESCGVPPDQKAKNVLL 496
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 150/388 (38%), Gaps = 52/388 (13%)
Query: 160 FITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
ITAY A + S +++ G +P+++SY A++ + + G+ A I G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 220 ILPDDVTYSALIQALCLQGSLPEA---FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
P +TY +++ EA F+ L+ + + P Y ++Y Y G +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A + M +G +P S VT+N+L+ S + V + I M + PD
Sbjct: 265 KARKVFSSMVGKG-VPQ-------STVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPD 313
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
VSY ++ + + R ++A + EM LD + Y+ LL+ +
Sbjct: 314 VVSYALLIKAYGRARREEEALSVFEEM------LDAGVRPT-------HKAYNILLDAFA 360
Query: 397 AQGNMQKVFKLEREMTRNGYLPD----SVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
G +++ + + M R+ PD + L ++N + + K I +
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE---- 416
Query: 453 TMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNL 512
P+ + Y TLI K ++ V + +E+M +K + +
Sbjct: 417 --PNIVTYGTLI---------------KGYAKANDVEKMMEVYEKMRLSGIKANQTILTT 459
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
++ R N A YKEM G P
Sbjct: 460 IMDASGRCKNFGSALGWYKEMESCGVPP 487
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 6/244 (2%)
Query: 9 KSFRHMVRMNVMIRGFATESVMSCKE--KKVGETFGLLR---MEPYLVSFKGVIKELCEK 63
K F MV V S+MS + K+V + + ++ ++P +VS+ +IK
Sbjct: 268 KVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRA 327
Query: 64 ERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY 123
R EEA V EM G+ P + YN L+ + A ++ MR + P+ +Y
Sbjct: 328 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 387
Query: 124 MSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
+++ ++ A K F + GF P++ TY I Y + VE+ + ++ M
Sbjct: 388 TTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 447
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE 242
G+ + ++ + AL E G+ PD + L+ Q L E
Sbjct: 448 SGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEE 507
Query: 243 AFDL 246
A +L
Sbjct: 508 AKEL 511
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 40/288 (13%)
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ AY +G F+ A + + G +P+++++ AL+ + + A I
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGS--------TPNVISYTALMESYGRGGKCNNAEAI 196
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL-KVEMDEKIIWLDEYTYESLMEGLS 383
R M G P A++Y +L F + + K+A E+ + +DEK L
Sbjct: 197 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLK-----------P 245
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL 443
D+ Y ++ Y GN +K K+ M G +VT ++ + + ++K
Sbjct: 246 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSYKEVSK--- 300
Query: 444 LRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSV 503
IYD + + + S L+K + EA E M + V
Sbjct: 301 ---------------IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
+P YN+L+ G V +A ++K M FP ++S +++ A
Sbjct: 346 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 393
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 15/301 (4%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++S+ +++ + A+ + R M G P TY ++ + A E+
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 108 YDQM---RVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
++ + + L P+++ Y +I + +KA KVF+ M+ G S TYN ++
Sbjct: 239 FETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF 298
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
S + V + I+ M + PD+VSY +I + + E+AL + E ++ G+ P
Sbjct: 299 ETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPT 355
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
Y+ L+ A + G + +A +F M R + P +YT ++ AY + A
Sbjct: 356 HKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFK 415
Query: 284 EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
++ G F P++VT+ LI G V++ + + M G+ + T+
Sbjct: 416 RIKVDG--------FEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTI 467
Query: 344 L 344
+
Sbjct: 468 M 468
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 4/228 (1%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
E+A++V M KG+ TYN+L+ + + ++YDQM+ + P+ +Y L
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEV---SKIYDQMQRSDIQPDVVSYALL 327
Query: 127 IDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
I ++A VF EM+ +G P+ YN + A+ S VEQA +F +M +
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
PDL SY ++S + ++E A + G P+ VTY LI+ + + +
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 447
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
++ +M + + + T +M A F A + EM G PD
Sbjct: 448 VYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPD 495
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 153/364 (42%), Gaps = 28/364 (7%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A+ V+ +++ G P+ +Y AL+ + A ++ +M+ G P+ TY ++
Sbjct: 165 AERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILK 224
Query: 129 LLCTW-WLDKAYKVFNEMI---ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
+A +VF ++ S P Y+ I Y + E+A +FS+M +G
Sbjct: 225 TFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKG 284
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
+ V+YN+++S E+ K I + I PD V+Y+ LI+A EA
Sbjct: 285 VPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEAL 341
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+F EML V P++ Y L+ A+ + G A + MR PD L +
Sbjct: 342 SVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD--------LWS 393
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+ ++ + ++ A + + G P+ V+Y T++ G+ + +++K E+ +M
Sbjct: 394 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 453
Query: 365 EKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
I ++ ++M+ + S L Y +EM G PD
Sbjct: 454 LSGIKANQTILTTIMDASGRCKNFGSALGWY-------------KEMESCGVPPDQKAKN 500
Query: 425 VFIN 428
V ++
Sbjct: 501 VLLS 504
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 27/301 (8%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+ A +V + + G P+V +Y + +Y + A IF M G P ++Y
Sbjct: 162 FNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQI 221
Query: 195 VISKFCQDG---ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
++ F + E E+ E + + + PD Y +I G+ +A +F M+
Sbjct: 222 ILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMV 281
Query: 252 RGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
V S TY LM E S ++D+M+ PD +V++ LI
Sbjct: 282 GKGVPQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPD--------VVSYALLIKA 330
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
R +EAL + M + G+ P +YN +L F +++A + M I+ D
Sbjct: 331 YGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 390
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
+ +Y+++L+ Y +M+ K + + +G+ P+ VT G I G
Sbjct: 391 LW-------------SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYA 437
Query: 432 K 432
K
Sbjct: 438 K 438
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
+E ++ +M R + PD +Y LI + R A+ ++++M G+ P + Y L
Sbjct: 303 KEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNIL 362
Query: 127 IDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
+D + +++A VF M P + +Y ++AY+++ +E A F + G
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
P++V+Y +I + + ++EK +E+ + GI + + ++ A + A
Sbjct: 423 EPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALG 482
Query: 246 LFLEMLRGDVSPSNSTYTRLM 266
+ EM V P L+
Sbjct: 483 WYKEMESCGVPPDQKAKNVLL 503
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 150/388 (38%), Gaps = 52/388 (13%)
Query: 160 FITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
ITAY A + S +++ G +P+++SY A++ + + G+ A I G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 220 ILPDDVTYSALIQALCLQGSLPEA---FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
P +TY +++ EA F+ L+ + + P Y ++Y Y G +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A + M +G +P S VT+N+L+ S + V + I M + PD
Sbjct: 272 KARKVFSSMVGKG-VPQ-------STVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPD 320
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
VSY ++ + + R ++A + EM LD + Y+ LL+ +
Sbjct: 321 VVSYALLIKAYGRARREEEALSVFEEM------LDAGVRPT-------HKAYNILLDAFA 367
Query: 397 AQGNMQKVFKLEREMTRNGYLPD----SVTLGVFINGLNKKATTSIAKGILLRMISSQCL 452
G +++ + + M R+ PD + L ++N + + K I +
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFE---- 423
Query: 453 TMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNL 512
P+ + Y TLI K ++ V + +E+M +K + +
Sbjct: 424 --PNIVTYGTLI---------------KGYAKANDVEKMMEVYEKMRLSGIKANQTILTT 466
Query: 513 LIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
++ R N A YKEM G P
Sbjct: 467 IMDASGRCKNFGSALGWYKEMESCGVPP 494
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 101/244 (41%), Gaps = 6/244 (2%)
Query: 9 KSFRHMVRMNVMIRGFATESVMSCKE--KKVGETFGLLR---MEPYLVSFKGVIKELCEK 63
K F MV V S+MS + K+V + + ++ ++P +VS+ +IK
Sbjct: 275 KVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRA 334
Query: 64 ERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY 123
R EEA V EM G+ P + YN L+ + A ++ MR + P+ +Y
Sbjct: 335 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY 394
Query: 124 MSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
+++ ++ A K F + GF P++ TY I Y + VE+ + ++ M
Sbjct: 395 TTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRL 454
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE 242
G+ + ++ + AL E G+ PD + L+ Q L E
Sbjct: 455 SGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEE 514
Query: 243 AFDL 246
A +L
Sbjct: 515 AKEL 518
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 40/288 (13%)
Query: 265 LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGI 324
L+ AY +G F+ A + + G +P+++++ AL+ + + A I
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGS--------TPNVISYTALMESYGRGGKCNNAEAI 203
Query: 325 LRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL-KVEMDEKIIWLDEYTYESLMEGLS 383
R M G P A++Y +L F + + K+A E+ + +DEK L
Sbjct: 204 FRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLK-----------P 252
Query: 384 DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL 443
D+ Y ++ Y GN +K K+ M G +VT ++ + + ++K
Sbjct: 253 DQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSYKEVSK--- 307
Query: 444 LRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSV 503
IYD + + + S L+K + EA E M + V
Sbjct: 308 ---------------IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHA 551
+P YN+L+ G V +A ++K M FP ++S +++ A
Sbjct: 353 RPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSA 400
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 120/565 (21%), Positives = 232/565 (41%), Gaps = 117/565 (20%)
Query: 12 RHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPY-LVSFKGVIKELCEKERMEEAK 70
R++V N M+ G+ K +++ E + L R P +VS+ ++ LC+ R E+A
Sbjct: 106 RNIVTCNAMLTGYV-------KCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAV 158
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
E+ EM + + ++N L+ G+ + +M A +++D M R
Sbjct: 159 ELFDEMPERNVV----SWNTLVTGLIRNGDMEKAKQVFDAMPSR---------------- 198
Query: 131 CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
V ++N I Y+ ++ +E+A +F M+E+ ++V
Sbjct: 199 ----------------------DVVSWNAMIKGYIENDGMEEAKLLFGDMSEK----NVV 232
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
++ +++ +C+ G++ +A + E E+ I V+++A+I EA LFLEM
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMISGFAWNELYREALMLFLEM 288
Query: 251 LR--GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNAL 308
+ VSP+ T L YA G + F E H + + +L
Sbjct: 289 KKDVDAVSPNGETLISLAYA---CGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSL 345
Query: 309 IHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKII 368
+H S + A +L S D S N ++ + + +L++A
Sbjct: 346 VHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLKNGDLERA------------ 387
Query: 369 WLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFIN 428
E +E + + L D+V+++S+++ Y G++ + F L +++ + D VT V I+
Sbjct: 388 ---ETLFERV-KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKL----HDKDGVTWTVMIS 439
Query: 429 GLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN---------------------- 466
GL + + A +L M+ +C P Y L+ +
Sbjct: 440 GLVQNELFAEAASLLSDMV--RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTA 497
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
C + LV ++ G + +A +M V+ D +N +I G +KA
Sbjct: 498 CYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM----VQKDTVSWNSMIMGLSHHGLADKA 553
Query: 527 YEMYKEMVHYGFFPHMFSVLSLIHA 551
++KEM+ G P+ + L ++ A
Sbjct: 554 LNLFKEMLDSGKKPNSVTFLGVLSA 578
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/467 (23%), Positives = 197/467 (42%), Gaps = 83/467 (17%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+++A+ +F EM +V ++ +TA R E A+ +F M ER ++VS+N
Sbjct: 124 MNEAWTLFREMP-----KNVVSWTVMLTALCDDGRSEDAVELFDEMPER----NVVSWNT 174
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+++ ++G++EKA ++ + D V+++A+I+ + EA LF GD
Sbjct: 175 LVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLF-----GD 225
Query: 255 VSPSNS-TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
+S N T+T ++Y YC G+ A+ L EM R ++V++ A+I G
Sbjct: 226 MSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPER------------NIVSWTAMISGFA 273
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYN----TVLFGFC-----QIRELKKAYELK---- 360
E EAL + EM DAVS N L C + R L + +
Sbjct: 274 WNELYREALMLFL---EMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISN 330
Query: 361 ----VEMDEKIIWLDEYTY---------ESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKL 407
V+ D ++ + Y +SL+ D + + ++N Y G++++
Sbjct: 331 GWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERA--- 387
Query: 408 EREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENC 467
E R L D V+ I+G + S A G+ ++ +T ++ L++N
Sbjct: 388 ETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWT--VMISGLVQNE 445
Query: 468 SYVEFKSAV------GLVKDFSTRGLVNEAAIA------HERMHNMSVK------PDGAV 509
+ E S + GL ST ++ +A A + +H + K PD +
Sbjct: 446 LFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLIL 505
Query: 510 YNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDR 556
N L+ + + G + AYE++ +MV ++ L H D+
Sbjct: 506 QNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADK 552
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 203/509 (39%), Gaps = 89/509 (17%)
Query: 12 RHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKE 71
R +V N MI+G+ M +E K+ FG + E +V++ ++ C + EA
Sbjct: 198 RDVVSWNAMIKGYIENDGM--EEAKL--LFGDMS-EKNVVTWTSMVYGYCRYGDVREAYR 252
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR--VRGLSPNERTYMSLI-- 127
+ EM + + ++ A+I G A+ L+ +M+ V +SPN T +SL
Sbjct: 253 LFCEMPERNIV----SWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYA 308
Query: 128 -DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
L + ++ ++I++G+ ++ + L L I SA + S
Sbjct: 309 CGGLGVEFRRLGEQLHAQVISNGW--ETVDHDGRLAKSLVHMYASSGL-IASAQSLLNES 365
Query: 187 PDLVSYNAVISKFCQDGELEKA-----------------------LEIKAETVEKGIL-- 221
DL S N +I+++ ++G+LE+A LE + G+
Sbjct: 366 FDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQK 425
Query: 222 ---PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMA 278
D VT++ +I L EA L +M+R + P NSTY+ L+ +
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 279 FHLHDEMRHRG--FLPDFVIQFS-----------------------PSLVTFNALIHGLC 313
H+H + + PD ++Q S V++N++I GL
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLS 545
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
D+AL + + M + G P++V++ VL + + EL M E
Sbjct: 546 HHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKE-------- 597
Query: 374 TYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFIN--GLN 431
TY S+ G+ ++ LL G K+ + E ++ + PD G + GLN
Sbjct: 598 TY-SIQPGIDHYISMIDLL------GRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLN 650
Query: 432 --KKATTSIAKGILLRMISSQCLTMPSYI 458
K IA+ +R++ + P ++
Sbjct: 651 WRDKDAEGIAERAAMRLLELDPVNAPGHV 679
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 113/232 (48%), Gaps = 31/232 (13%)
Query: 138 AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
A + +++ G + V + ++ Y + +++A +F M ER ++V+ NA+++
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTCNAMLT 116
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDV-TYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
+ + + +A + E +P +V +++ ++ ALC G +A +LF EM +V
Sbjct: 117 GYVKCRRMNEAWTLFRE------MPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVV 170
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
N+ T L+ G+ A + D M R +V++NA+I G +
Sbjct: 171 SWNTLVTGLIRN----GDMEKAKQVFDAMPSR------------DVVSWNAMIKGYIEND 214
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKII 368
++EA + M E + V++ ++++G+C+ ++++AY L EM E+ I
Sbjct: 215 GMEEAKLLFGDMSE----KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI 262
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 124/323 (38%), Gaps = 63/323 (19%)
Query: 8 LKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRM--EPYLVSFKGVIKELCEKER 65
+KS V MI G+ + V FGL + + V++ +I L + E
Sbjct: 394 VKSLHDKVSWTSMIDGY-------LEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNEL 446
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
EA ++ +M R GL P TY+ L+ N+ DQ +
Sbjct: 447 FAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNL-------DQGK------------- 486
Query: 126 LIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
+ C + K ++ P + N ++ Y +E A IF+ M ++
Sbjct: 487 --HIHCV--IAKTTACYD--------PDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK-- 532
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
D VS+N++I G +KAL + E ++ G P+ VT+ ++ A G + +
Sbjct: 533 --DTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLE 590
Query: 246 LFLEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV--IQFSPSL 302
LF M + P Y ++ G+ A +F+ + F+P
Sbjct: 591 LFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEA-------------EEFISALPFTPDH 637
Query: 303 VTFNALIHGLCSLE-RVDEALGI 324
+ AL+ GLC L R +A GI
Sbjct: 638 TVYGALL-GLCGLNWRDKDAEGI 659
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 13/235 (5%)
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
EAK + REM + P+ ++Y+ +I KV N+ ++ LYD+M+ RGL+P Y SL+
Sbjct: 277 EAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLV 336
Query: 128 DLL----CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
+L C D+A K+ ++ G P TYN I + +++ A + + M
Sbjct: 337 YVLTREDC---FDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISE 393
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE- 242
LSP + +++A F + EK LE+ + + P + T+ LI +G PE
Sbjct: 394 NLSPTVDTFHA----FLEAVNFEKTLEVLGQMKISDLGPTEETF-LLILGKLFKGKQPEN 448
Query: 243 AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQ 297
A ++ EM R ++ + + Y + G A ++ EM+ +GF+ + ++Q
Sbjct: 449 ALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQ 503
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 139/289 (48%), Gaps = 17/289 (5%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAP-DCETYNALICGMCKV-RNMLCAV 105
PY +F+G++ LC +E+A+E + + K L P D E +N ++ G C + ++ A
Sbjct: 222 PYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTEAK 279
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAY 164
++ +M ++PN+ +Y +I L + ++++EM G P + YN +
Sbjct: 280 RIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVL 339
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ ++A+ + + E GL PD V+YN++I C+ G+L+ A + A + + + P
Sbjct: 340 TREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTV 399
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
T+ A ++A+ + +L ++ +M D+ P+ T+ ++G+ +
Sbjct: 400 DTFHAFLEAVNFEKTL----EVLGQMKISDLGPTEETF------LLILGKLFKGKQPENA 449
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
++ + F I +P+L + A I GL S +++A I M G
Sbjct: 450 LKIWAEMDRFEIVANPAL--YLATIQGLLSCGWLEKAREIYSEMKSKGF 496
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 114/230 (49%), Gaps = 12/230 (5%)
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
Y ++ QA+ F M + +P ++ ++ C+ G +EKA E + K + P
Sbjct: 199 YAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLAS--KKLFPV 256
Query: 224 DVT-YSALIQALC-LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
DV ++ ++ C + + EA ++ EM ++P+ +Y+ ++ + VG + L
Sbjct: 257 DVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRL 316
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
+DEM+ RG +P + +N+L++ L + DEA+ +++ + E GL PD+V+YN
Sbjct: 317 YDEMKKRG--------LAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYN 368
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSL 391
+++ C+ +L A + M + + T+ + +E ++ E T L
Sbjct: 369 SMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVL 418
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
NV++ G+ + K++ G + P S+ +I + + ++ + EM
Sbjct: 262 NVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMK 321
Query: 78 RKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLD 136
++GLAP E YN+L+ + + A++L ++ GL P+ TY S+I LC LD
Sbjct: 322 KRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLD 381
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A V MI+ P+V T++ F+ A E+ L + M L P ++ ++
Sbjct: 382 VARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKISDLGPTEETFLLIL 437
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
K + + E AL+I AE I+ + Y A IQ L G L +A +++ EM
Sbjct: 438 GKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEM 491
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 12/195 (6%)
Query: 36 KVGETFGLLRM---------EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCE 86
KVG F LR+ P + + ++ L ++ +EA ++++++N +GL PD
Sbjct: 306 KVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSV 365
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMI 146
TYN++I +C+ + A + M LSP T+ + ++ + +K +V +M
Sbjct: 366 TYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVN---FEKTLEVLGQMK 422
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE 206
S P+ T+ + ++ E AL I++ M + + Y A I G LE
Sbjct: 423 ISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLE 482
Query: 207 KALEIKAETVEKGIL 221
KA EI +E KG +
Sbjct: 483 KAREIYSEMKSKGFV 497
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 103/259 (39%), Gaps = 34/259 (13%)
Query: 298 FSPSLVTFNALIHGLCSL-ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
F + FN +++G C++ V EA I R M ++P+ SY+ ++ F ++ L +
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 357 YELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
L EM ++ + Y SL+ L+ E + + KL +++ G
Sbjct: 314 LRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFD-------------EAMKLMKKLNEEGL 360
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAV 476
PDSVT I L + +A+ +L MIS P+ + +E ++ + +
Sbjct: 361 KPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL--SPTVDTFHAFLEAVNFEKTLEVL 418
Query: 477 G-----------------LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
G L K F + N I E M + + A+Y I
Sbjct: 419 GQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAE-MDRFEIVANPALYLATIQGLLS 477
Query: 520 RGNVNKAYEMYKEMVHYGF 538
G + KA E+Y EM GF
Sbjct: 478 CGWLEKAREIYSEMKSKGF 496
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 149/335 (44%), Gaps = 11/335 (3%)
Query: 4 LRATLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEK 63
L T+K R ++ NV ++ F + EK E ++P +F +I +
Sbjct: 165 LLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLER-GIKPDNATFTTIISCARQN 223
Query: 64 ERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY 123
+ A E +M+ G PD T A+I + N+ A+ LYD+ R + T+
Sbjct: 224 GVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTF 283
Query: 124 MSLIDLL-CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
+LI + + D ++ EM A G P++ YN+ I + ++R QA I+ +
Sbjct: 284 STLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLIT 343
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE 242
G +P+ +Y A++ + + + AL I E EKG+ + Y+ L+ + E
Sbjct: 344 NGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDE 403
Query: 243 AFDLFLEMLRGDV-SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
AF++F +M + P + T++ L+ Y G S A +MR G F P+
Sbjct: 404 AFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAG--------FEPT 455
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
L ++I ++VD+ + + E+G++PD
Sbjct: 456 LFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 141/366 (38%), Gaps = 74/366 (20%)
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
S +++ YN + F + +LEK+ ++ E +E+GI PD+ T++ +I G A +
Sbjct: 172 SREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVE 231
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
F +M P N T ++ AY G MA L+D R + D VTF
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRID--------AVTF 283
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
+ LI D L I M +G+ P+ V YN ++ + + +A
Sbjct: 284 STLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQA--------- 334
Query: 366 KIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGV 425
KII+ +++ NG+ P+ T
Sbjct: 335 KIIY---------------------------------------KDLITNGFTPNWSTYAA 355
Query: 426 FINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTR 485
+ + A I R + + L++ + I+Y+TL+ C+ +
Sbjct: 356 LVRAYGRARYGDDALAI-YREMKEKGLSL-TVILYNTLLSMCADNRY------------- 400
Query: 486 GLVNEAAIAHERMHNM-SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFS 544
V+EA + M N + PD ++ LI + G V++A +M GF P +F
Sbjct: 401 --VDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFV 458
Query: 545 VLSLIH 550
+ S+I
Sbjct: 459 LTSVIQ 464
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 40/305 (13%)
Query: 77 NRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLD 136
++ G TYNA++ + K RN EL ++M + NE + + +D +
Sbjct: 158 SQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-----NKNEESKLVTLDTMS----- 207
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
KV + SG YNK + A+L E+ G+ D ++ N+++
Sbjct: 208 ---KVMRRLAKSG------KYNKAVDAFLEMEK------------SYGVKTDTIAMNSLM 246
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVS 256
++ +E A E+ + + I PD T++ LI C +A + M + +
Sbjct: 247 DALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFT 305
Query: 257 PSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLE 316
P TYT + AYC G+F + +EMR G +P++VT+ ++H L +
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG--------CNPNVVTYTIVMHSLGKSK 357
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
+V EALG+ M E G PDA Y++++ + K A E+ +M + + D Y
Sbjct: 358 QVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYN 417
Query: 377 SLMEG 381
+++
Sbjct: 418 TMISA 422
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 17/254 (6%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRM------EPYLVSFKGVIKELCEKERMEEAKE 71
N++I GF CK +K + ++ + P +V++ ++ C++ E
Sbjct: 277 NILIHGF-------CKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNE 329
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
++ EM G P+ TY ++ + K + + A+ +Y++M+ G P+ + Y SLI +L
Sbjct: 330 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Query: 132 -TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE---RGLSP 187
T A ++F +M G V YN I+A L R E AL + M + SP
Sbjct: 390 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSP 449
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
++ +Y ++ C +++ + V+ + D TY LI+ LC+ G + EA F
Sbjct: 450 NVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFF 509
Query: 248 LEMLRGDVSPSNST 261
E +R + P +ST
Sbjct: 510 EEAVRKGMVPRDST 523
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 4/251 (1%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P +F +I C+ + ++A+ ++ M PD TY + + CK +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E+ ++MR G +PN TY ++ L + + +A V+ +M G +P Y+ I
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE-IKAETVEKG--IL 221
+ R + A IF M +G+ D++ YN +IS E AL +K E+G
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCS 448
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
P+ TY+ L++ C + + L M++ DVS STY L+ C+ G+ A
Sbjct: 449 PNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLF 508
Query: 282 HDEMRHRGFLP 292
+E +G +P
Sbjct: 509 FEEAVRKGMVP 519
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 162/370 (43%), Gaps = 29/370 (7%)
Query: 71 EVVREMNRKGLAP--DCETYNALICGMCKVRNMLCAVELYDQM-RVRGLSPNERTYMSLI 127
E+V EMN+ + +T + ++ + K AV+ + +M + G+ + SL+
Sbjct: 187 ELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLM 246
Query: 128 DLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
D L ++ A++VF ++ + P T+N I + + + + A + M +
Sbjct: 247 DALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFT 305
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
PD+V+Y + + +C++G+ + E+ E E G P+ VTY+ ++ +L + EA +
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGV 365
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
+ +M P Y+ L++ G F A + ++M ++G D ++ +N
Sbjct: 366 YEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLV--------YN 417
Query: 307 ALIHGLCSLERVDEALGILRGMPE---MGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+I R + AL +L+ M + SP+ +Y +L C +++K L M
Sbjct: 418 TMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHM 477
Query: 364 DEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
+ + +D TY L+ GL G +++ E R G +P T
Sbjct: 478 VKNDVSIDVSTYILLIRGLC-------------MSGKVEEACLFFEEAVRKGMVPRDSTC 524
Query: 424 GVFINGLNKK 433
+ ++ L KK
Sbjct: 525 KMLVDELEKK 534
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 42/292 (14%)
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSP--SNSTYTRLMYAYCLVGEFSMAFHLHD 283
TY+A++ L + ++L EM + + S + T +++M G+++ A
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 284 EM-RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
EM + G D + N+L+ L ++ A + + + + PDA ++N
Sbjct: 228 EMEKSYGVKTD--------TIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNI 278
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQ 402
++ GFC+ R+ A + MD ++ + E+T D VTY+S + Y +G+ +
Sbjct: 279 LIHGFCKARKFDDARAM---MD--LMKVTEFT--------PDVVTYTSFVEAYCKEGDFR 325
Query: 403 KVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDT 462
+V ++ EM NG P+ VT + ++ L K + A G+ +M C+ P Y +
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCV--PDAKFYSS 383
Query: 463 LIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
LI S G KD AA E M N V+ D VYN +I
Sbjct: 384 LI------HILSKTGRFKD---------AAEIFEDMTNQGVRRDVLVYNTMI 420
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 112/236 (47%), Gaps = 1/236 (0%)
Query: 12 RHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKE 71
R ++ N ++ + E+ E G L ++P +VS+ +IK LCEK+ + EA
Sbjct: 142 RSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVA 201
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS-LIDLL 130
++ E+ KGL PD T+N L+ E++ +M + ++ + RTY + L+ L
Sbjct: 202 LLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLA 261
Query: 131 CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
+ +F E+ ASG P V ++N I ++ ++++A + + + G PD
Sbjct: 262 NEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKA 321
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
++ ++ C+ G+ E A+E+ ET K L T L+ L EA ++
Sbjct: 322 TFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 109/227 (48%), Gaps = 2/227 (0%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVR-GLSPNERTYMS 125
E A++V EM + ++NAL+ + EL++++ + + P+ +Y +
Sbjct: 126 ENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNT 185
Query: 126 LIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
LI LC L +A + +E+ G P + T+N + + + E I++ M E+
Sbjct: 186 LIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKN 245
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
++ D+ +YNA + + + ++ + + E G+ PD +++A+I+ +G + EA
Sbjct: 246 VAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAE 305
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
+ E+++ P +T+ L+ A C G+F A L E + +L
Sbjct: 306 AWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYL 352
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 238 GSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQ 297
G A +F EM D S ++ L+ AY L +F + L +E+ + +
Sbjct: 123 GMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGK-------LS 175
Query: 298 FSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
P +V++N LI LC + + EA+ +L + GL PD V++NT+L + +
Sbjct: 176 IKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGE 235
Query: 358 ELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLN------------DYFA-------- 397
E+ +M EK + +D TY + + GL++E L+N D F+
Sbjct: 236 EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGS 295
Query: 398 --QGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNK 432
+G M + +E+ ++GY PD T + + + K
Sbjct: 296 INEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCK 332
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 121/270 (44%), Gaps = 25/270 (9%)
Query: 63 KERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNML-CAVELYDQMRVRGLSPNER 121
+E +EE K+ R+M+++G A A I + M A +++++M R +R
Sbjct: 94 EEILEEQKKY-RDMSKEGFA-------ARIISLYGKAGMFENAQKVFEEMPNRDC---KR 142
Query: 122 TYMSLIDLLCTWWLDKAYKV----FNEMIAS-GFLPSVATYNKFITAYLSSERVEQALGI 176
+ +S LL + L K + V FNE+ P + +YN I A + + +A+ +
Sbjct: 143 SVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVAL 202
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCL 236
+ +GL PD+V++N ++ G+ E EI A+ VEK + D TY+A + L
Sbjct: 203 LDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLAN 262
Query: 237 QGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI 296
+ E +LF E+ + P ++ ++ G+ A + E+ G+ PD
Sbjct: 263 EAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD--- 319
Query: 297 QFSPSLVTFNALIHGLCSLERVDEALGILR 326
TF L+ +C + A+ + +
Sbjct: 320 -----KATFALLLPAMCKAGDFESAIELFK 344
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 124/305 (40%), Gaps = 39/305 (12%)
Query: 263 TRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEAL 322
R++ Y G F A + +EM +R S+++FNAL+ ++ D
Sbjct: 113 ARIISLYGKAGMFENAQKVFEEMPNR--------DCKRSVLSFNALLSAYRLSKKFDVVE 164
Query: 323 GILRGMP-EMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG 381
+ +P ++ + PD VSYNT++ C+ K + E + LDE + L
Sbjct: 165 ELFNELPGKLSIKPDIVSYNTLIKALCE----------KDSLPEAVALLDEIENKGLK-- 212
Query: 382 LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG 441
D VT+++LL + +G + ++ +M D T + GL +A +
Sbjct: 213 -PDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN 271
Query: 442 ILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNM 501
+ + +S P ++ +I G + + G ++EA ++ +
Sbjct: 272 LFGELKASGL--KPDVFSFNAMIR-----------GSINE----GKMDEAEAWYKEIVKH 314
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEM 561
+PD A + LL+ C+ G+ A E++KE + ++ L+ L K E
Sbjct: 315 GYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEA 374
Query: 562 GWVIR 566
+++
Sbjct: 375 EEIVK 379
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 207/474 (43%), Gaps = 69/474 (14%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A++V ++ R + P +NA+I G + + A+ +Y M++ +SP+ T+ L+
Sbjct: 72 ARQVFDDLPRPQIFP----WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 129 LLCTWW--LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMA--ERG 184
C+ L V ++ GF V N I Y R+ A +F + ER
Sbjct: 128 A-CSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPER- 185
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL-CLQGSLPEA 243
+VS+ A++S + Q+GE +ALEI ++ + + PD V +++ A CLQ L +
Sbjct: 186 ---TIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ-DLKQG 241
Query: 244 FDLFLEMLRG--DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
+ +++ ++ P MYA C G+ + A L D+M+ SP+
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKC--GQVATAKILFDKMK------------SPN 287
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
L+ +NA+I G EA+ + M + PD +S + + Q+ L++A +
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY- 346
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQ-GNMQKV-FKLEREMTRNGYLPD 419
EY S D+V SS L D FA+ G+++ +R + R+ +
Sbjct: 347 ----------EYVGRS---DYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 420 SVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLV 479
++ +G ++G ++A + L R + + P+ + + L+ C++
Sbjct: 394 AMIVGYGLHGRAREAIS------LYRAMERGGV-HPNDVTFLGLLMACNH---------- 436
Query: 480 KDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
G+V E RM + + P Y +I R G++++AYE+ K M
Sbjct: 437 -----SGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 113/287 (39%), Gaps = 19/287 (6%)
Query: 82 APDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYK 140
+P+ +NA+I G K A++++ +M + + P+ + S I L++A
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 141 VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC 200
++ + S + V + I + VE A +F +R L D+V ++A+I +
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF----DRTLDRDVVVWSAMIVGYG 400
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
G +A+ + G+ P+DVT+ L+ A G + E + F M ++P
Sbjct: 401 LHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQ 460
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
Y C++ A HL +P P + + AL+ C R E
Sbjct: 461 HYA------CVIDLLGRAGHLDQAYEVIKCMP-----VQPGVTVWGALLSA-CKKHRHVE 508
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFG-FCQIRELKKAYELKVEMDEK 366
LG + P + L + R + E++V M EK
Sbjct: 509 -LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEK 554
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 79 KGLAPD---CETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW- 134
K L PD +NAL+ +C+ ++M A +Y ++ P+ +T+ ++L + W
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLK-HQFQPDLQTF----NILLSGWK 225
Query: 135 -LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
++A F EM G P V TYN I Y +E+A + M E +PD+++Y
Sbjct: 226 SSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYT 285
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
VI G+ +KA E+ E E G PD Y+A I+ C+ L +A L EM++
Sbjct: 286 TVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKK 345
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
+SP+ +TY L + ++ L+ M LP+
Sbjct: 346 GLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPN 385
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 1/177 (0%)
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI-DLLCTWW 134
M KGL PD TYN+LI CK R + A +L D+MR +P+ TY ++I L
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
DKA +V EM G P VA YN I + + R+ A + M ++GLSP+ +YN
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
+L ++ E+ + LP+ + LI+ + A L+ +M+
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMV 413
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 14/222 (6%)
Query: 142 FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
F ++ F A +N + + + A ++ ++ + PDL ++N ++S +
Sbjct: 170 FKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW-- 224
Query: 202 DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
E+A E KG+ PD VTY++LI C + +A+ L +M + +P T
Sbjct: 225 -KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVIT 283
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA 321
YT ++ L+G+ A + EM+ G PD + +NA I C R+ +A
Sbjct: 284 YTTVIGGLGLIGQPDKAREVLKEMKEYGCYPD--------VAAYNAAIRNFCIARRLGDA 335
Query: 322 LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
++ M + GLSP+A +YN +L +++EL V M
Sbjct: 336 DKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRM 377
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 7/226 (3%)
Query: 32 CKEKKVGETFGL---LRME---PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDC 85
CK++++ + + L +R E P ++++ VI L + ++A+EV++EM G PD
Sbjct: 257 CKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDV 316
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNE 144
YNA I C R + A +L D+M +GLSPN TY +L L ++++++
Sbjct: 317 AAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVR 376
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M+ + LP+ + I + E+V+ A+ ++ M +G + + ++ C +
Sbjct: 377 MLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAK 436
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+E+A + E VEKG P +V++ + + L E +L +M
Sbjct: 437 VEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKM 482
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D +NA++ CQ+ + A + +++ PD T++ L+ S EA F
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNV-YHSLKHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
EM + P TY L+ YC E A+ L D+MR PD ++T+
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPD--------VITYTT 286
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
+I GL + + D+A +L+ M E G PD +YN + FC R L A +L EM +K
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 368 IWLDEYTYESLMEGLS 383
+ + TY LS
Sbjct: 347 LSPNATTYNLFFRVLS 362
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P +V++ +I C+ +E+A +++ +M + PD TY +I G+ + A
Sbjct: 242 LKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAR 301
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E+ +M+ G P+ Y + I C L A K+ +EM+ G P+ TYN F
Sbjct: 302 EVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ + ++ ++ M P+ S +I F + +++ A+ + + V KG
Sbjct: 362 SLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYS 421
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRL 265
+ L+ LC + EA LEM+ PSN ++ R+
Sbjct: 422 LVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 102/266 (38%), Gaps = 43/266 (16%)
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
+ + +PDF FNAL+ LC + + +A + + PD ++N +L
Sbjct: 169 KFKRLVPDFF-----DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLS 222
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGNMQKV 404
G+ + ++A EM K GL D VTY+SL++ Y ++K
Sbjct: 223 GW---KSSEEAEAFFEEMKGK--------------GLKPDVVTYNSLIDVYCKDREIEKA 265
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
+KL +M PD +T I GL A+ +L M C P Y+ I
Sbjct: 266 YKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCY--PDVAAYNAAI 323
Query: 465 EN-CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNV 523
N C A LV + +GL P+ YNL ++
Sbjct: 324 RNFCIARRLGDADKLVDEMVKKGL----------------SPNATTYNLFFRVLSLANDL 367
Query: 524 NKAYEMYKEMVHYGFFPHMFSVLSLI 549
+++E+Y M+ P+ S + LI
Sbjct: 368 GRSWELYVRMLGNECLPNTQSCMFLI 393
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 76/142 (53%)
Query: 145 MIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
M+ P+ TYN I + +RV+ A + +MA +G SPD+V+++ +I+ +C+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
++ +EI E +GI+ + VTY+ LI C G L A DL EM+ V+P T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 265 LMYAYCLVGEFSMAFHLHDEMR 286
++ C E AF + ++++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 118 PNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGI 176
P TY S+ID C +D A ++ + M + G P V T++ I Y ++RV+ + I
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCL 236
F M RG+ + V+Y +I FCQ G+L+ A ++ E + G+ PD +T+ ++ LC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 237 QGSLPEAFDLFLEMLRGD 254
+ L +AF + ++ + +
Sbjct: 128 KKELRKAFAILEDLQKSE 145
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
P ++YN++I FC+ ++ A + KG PD VT+S LI C + ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 247 FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFN 306
F EM R + + TYT L++ +C VG+ A L +EM G PD+ +TF+
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDY--------ITFH 119
Query: 307 ALIHGLCSLERVDEALGILRGMPE 330
++ GLCS + + +A IL + +
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQK 143
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P +++ +I C+++R+++AK ++ M KG +PD T++ LI G CK + + +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+ +M RG+ N TY +LI C LD A + NEMI+ G P T++ + S
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 167 SERVEQALGIF 177
+ + +A I
Sbjct: 128 KKELRKAFAIL 138
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 8/140 (5%)
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
I P +TY+++I C Q + +A + M SP T++ L+ YC
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 280 HLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVS 339
+ EM RG + + VT+ LIHG C + +D A +L M G++PD ++
Sbjct: 66 EIFCEMHRRGIVAN--------TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Query: 340 YNTVLFGFCQIRELKKAYEL 359
++ +L G C +EL+KA+ +
Sbjct: 118 FHCMLAGLCSKKELRKAFAI 137
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 13/151 (8%)
Query: 300 PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
P+ +T+N++I G C +RVD+A +L M G SPD V+++T++ G+C+ + + E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 360 KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
EM + I +++ VTY++L++ + G++ L EM G PD
Sbjct: 68 FCEMHRRGI-------------VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPD 114
Query: 420 SVTLGVFINGLNKKATTSIAKGILLRMISSQ 450
+T + GL K A IL + S+
Sbjct: 115 YITFHCMLAGLCSKKELRKAFAILEDLQKSE 145
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
MLR + P+ TY ++ +C A + D M +G SP +VTF+ LI
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGC--------SPDVVTFSTLI 52
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
+G C +RVD + I M G+ + V+Y T++ GFCQ+ +L A +L EM +
Sbjct: 53 NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVA 112
Query: 370 LDEYTYESLMEGL 382
D T+ ++ GL
Sbjct: 113 PDYITFHCMLAGL 125
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 1/137 (0%)
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWW 134
M R + P TYN++I G CK + A + D M +G SP+ T+ +LI+ C
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+D ++F EM G + + TY I + ++ A + + M G++PD ++++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 195 VISKFCQDGELEKALEI 211
+++ C EL KA I
Sbjct: 121 MLAGLCSKKELRKAFAI 137
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 335 PDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLN 393
P ++YN+++ GFC+ + A + M K G S D VT+S+L+N
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASK--------------GCSPDVVTFSTLIN 53
Query: 394 DYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLT 453
Y + ++ EM R G + ++VT I+G + A+ +L MIS C
Sbjct: 54 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS--CGV 111
Query: 454 MPSYIIYDTLIEN-CSYVEFKSAVGLVKDF 482
P YI + ++ CS E + A +++D
Sbjct: 112 APDYITFHCMLAGLCSKKELRKAFAILEDL 141
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 121/252 (48%), Gaps = 10/252 (3%)
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM-RVRGLSPNERTYMSLIDLL 130
V R++ + ++ ++ NAL+ ++ A +Y +M ++ G+ P+ TY +I +
Sbjct: 138 VFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVF 197
Query: 131 C-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
C + +Y + EM G P+ +++ I+ + + ++ ++ + + M +RG++ +
Sbjct: 198 CESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGV 257
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE 249
+YN I C+ + ++A + + G+ P+ VTYS LI C + EA LF
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
M+ P + Y L+Y C G+F A L E + ++P F I +L+
Sbjct: 318 MVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSI--------MKSLV 369
Query: 310 HGLCSLERVDEA 321
+GL +V+EA
Sbjct: 370 NGLAKDSKVEEA 381
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
+EP L ++ +IK CE + +V EM RKG+ P+ ++ +I G
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYK-VFNEMIASGFLPSVATYNKFITAY 164
++ M+ RG++ TY I LC K K + + M+++G P+ TY+ I +
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
+ + E+A +F M RG PD Y +I C+ G+ E AL + E++EK +P
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSF 362
Query: 225 VTYSALIQALCLQGSLPEAFDLF 247
+L+ L + EA +L
Sbjct: 363 SIMKSLVNGLAKDSKVEEAKELI 385
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Query: 67 EEAKEVVREMNRK-GLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMS 125
+EAK V EM + G+ PD ETYN +I C+ + + + +M +G+ PN ++
Sbjct: 168 KEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGL 227
Query: 126 LID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERG 184
+I D+ KV M G V+TYN I + ++ ++A + M G
Sbjct: 228 MISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG 287
Query: 185 LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF 244
+ P+ V+Y+ +I FC + + E+A ++ V +G PD Y LI LC G A
Sbjct: 288 MKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETAL 347
Query: 245 DLFLEMLRGDVSPSNSTYTRLM 266
L E + + PS S L+
Sbjct: 348 SLCKESMEKNWVPSFSIMKSLV 369
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 11/253 (4%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER-GLSPDLVSYN 193
LD + +VF ++ +V + N + A L ++ ++A ++ M + G+ PDL +YN
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 191
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+I FC+ G + I AE KGI P+ ++ +I + E + M
Sbjct: 192 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 251
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
V+ STY + + C + A L D M G P+ VT++ LIHG C
Sbjct: 252 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM--------KPNTVTYSHLIHGFC 303
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
+ + +EA + + M G PD+ Y T+++ C+ + + A L E EK W+ +
Sbjct: 304 NEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEK-NWVPSF 362
Query: 374 TY-ESLMEGLSDE 385
+ +SL+ GL+ +
Sbjct: 363 SIMKSLVNGLAKD 375
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 161/391 (41%), Gaps = 48/391 (12%)
Query: 185 LSPD----LVSY---NAVISKFCQDGELEKALEI-KAETVEKGILPDDVTYSALIQALCL 236
LSPD L S A +S + + ++ LEI +A ++ D + +SA ++ L
Sbjct: 33 LSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRIDRIAFSAAVENLAE 92
Query: 237 QGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI 296
+ + F +L G + + A+ +V ++ A L +R L F I
Sbjct: 93 K----KHFSAVSNLLDGFIENRPDLKSERFAAHAIVL-YAQANMLDHSLRVFRDLEKFEI 147
Query: 297 QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEM-GLSPDAVSYNTVLFGFCQIRELKK 355
S ++ + NAL+ + EA + MP+M G+ PD +YN ++ FC+
Sbjct: 148 --SRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASS 205
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
+Y + EM+ K I + ++ ++ G ++A+ +V K+ M G
Sbjct: 206 SYSIVAEMERKGIKPNSSSFGLMISG-------------FYAEDKSDEVGKVLAMMKDRG 252
Query: 416 YLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKS 474
T + I L K+ + AK +L M+S+ P+ + Y LI C+ +F+
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAG--MKPNTVTYSHLIHGFCNEDDFEE 310
Query: 475 AVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
A L K RG KPD Y LI+ C+ G+ A + KE +
Sbjct: 311 AKKLFKIMVNRG----------------CKPDSECYFTLIYYLCKGGDFETALSLCKESM 354
Query: 535 HYGFFPHMFSVLSLIHALYYDRKNSEMGWVI 565
+ P + SL++ L D K E +I
Sbjct: 355 EKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 8/169 (4%)
Query: 19 VMIRGFATESVMSCKEKKVGETFGLLR---MEPYLVSFKGVIKELCEKERMEEAKEVVRE 75
+MI GF E K +VG+ +++ + + ++ I+ LC++++ +EAK ++
Sbjct: 227 LMISGFYAED----KSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDG 282
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW- 134
M G+ P+ TY+ LI G C + A +L+ M RG P+ Y +LI LC
Sbjct: 283 MLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGD 342
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
+ A + E + ++PS + + +VE+A + + E+
Sbjct: 343 FETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 186/430 (43%), Gaps = 54/430 (12%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLA-PDCETYNALICGMCKVRNMLCAV 105
EP F +++ E + + V EM RKG PD ++ +I + R++
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLL----CTWWLDKAYKVFNEMIASGFLPSVATYNKFI 161
+++ Q GL + +LI + C ++ A KVF+EM P++ +N I
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGC---VEFARKVFDEM----HQPNLVAWNAVI 179
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
TA V A IF M R + S+N +++ + + GELE A I +E +
Sbjct: 180 TACFRGNDVAGAREIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEMPHR--- 232
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
DDV++S +I + GS E+F F E+ R +SP+ + T ++ A G F L
Sbjct: 233 -DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKIL 291
Query: 282 HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYN 341
H + G+ +++ + NALI V A + GM E VS+
Sbjct: 292 HGFVEKAGY--SWIVSVN------NALIDMYSRCGNVPMARLVFEGMQEKRC---IVSWT 340
Query: 342 TVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL---NDYFAQ 398
+++ G + ++A L EM + D ++ SL+ S ++ L+ DYF++
Sbjct: 341 SMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACS----HAGLIEEGEDYFSE 396
Query: 399 GNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYI 458
M++V+ +E E+ G + D +G +KA I Q P+ I
Sbjct: 397 --MKRVYHIEPEIEHYGCMVDLYGR----SGKLQKAYDFIC----------QMPIPPTAI 440
Query: 459 IYDTLIENCS 468
++ TL+ CS
Sbjct: 441 VWRTLLGACS 450
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 141/367 (38%), Gaps = 56/367 (15%)
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKG-ILPDDVTYSALIQALCLQGSLPEAFD 245
PD +N ++ + + E ++ + E + KG + PD +++ +I+A+ SL F
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
+ + L+ + T L+ Y G A + DEM P+LV +
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQ------------PNLVAW 175
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
NA+I V A I M L + S+N +L G+ + EL+ A + EM
Sbjct: 176 NAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPH 231
Query: 366 KIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGV 425
+ D+V++S+++ G+ + F RE+ R G P+ V+L
Sbjct: 232 R-----------------DDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 426 FINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTR 485
++ ++ + K I +E Y S + D +R
Sbjct: 275 VLSACSQSGSFEFGK------------------ILHGFVEKAGYSWIVSVNNALIDMYSR 316
Query: 486 -GLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFS 544
G V A + E M K + +I G +A ++ EM YG P S
Sbjct: 317 CGNVPMARLVFEGMQE---KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGIS 373
Query: 545 VLSLIHA 551
+SL+HA
Sbjct: 374 FISLLHA 380
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 138/296 (46%), Gaps = 14/296 (4%)
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMI 146
T N ++ + RNM EL ++ RGL ++ + L L L K F+ M
Sbjct: 114 TSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMN 173
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE 206
G+L +V T N+ + + VE+A +F + E + PD ++Y +I FC G+L
Sbjct: 174 GFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKE-FIKPDEITYRTMIQGFCDVGDLI 232
Query: 207 KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLM 266
+A ++ +++G D +++ L + EA +F M+ + + R+M
Sbjct: 233 EAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVM 292
Query: 267 YAY-CLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL 325
+ C G MA + DEMR RG D +T+ +LI+GL RV EA G++
Sbjct: 293 IDWLCKNGRIDMARKVFDEMRERGVYVDN--------LTWASLIYGLLVKRRVVEAYGLV 344
Query: 326 RGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG 381
G+ +PD Y+ ++ G +I+ +A E+ +M ++ +TY L++G
Sbjct: 345 EGVE----NPDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTYLMLLQG 396
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 117/243 (48%), Gaps = 7/243 (2%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
+F+ V+K L +++ MN G + ET N + +CK + + A ++ ++
Sbjct: 148 TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKL 207
Query: 112 RVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
+ + P+E TY ++I C L +A K++N M+ GF + K + L +
Sbjct: 208 K-EFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQF 266
Query: 171 EQALGIFSAM-AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
++A +F M ++RG D Y +I C++G ++ A ++ E E+G+ D++T+++
Sbjct: 267 DEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWAS 326
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
LI L ++ + EA+ L + G +P S Y L+ + S A + +M RG
Sbjct: 327 LIYGLLVKRRVVEAYGL----VEGVENPDISIYHGLIKGLVKIKRASEATEVFRKMIQRG 382
Query: 290 FLP 292
P
Sbjct: 383 CEP 385
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 188/449 (41%), Gaps = 58/449 (12%)
Query: 141 VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC 200
+ I +GF ++ + I YL V+ A +F +++R D+VS+ A+IS+F
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKR----DVVSWTAMISRFS 89
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
+ G AL + E + + + TY +++++ G L E + + +G+ + +
Sbjct: 90 RCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLI 149
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
+ L+ Y G+ A D M+ R LV++NA+I G + D
Sbjct: 150 VRSALLSLYARCGKMEEARLQFDSMKER------------DLVSWNAMIDGYTANACADT 197
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
+ + + M G PD ++ ++L + K E+ E+ I L +L+
Sbjct: 198 SFSLFQLMLTEGKKPDCFTFGSLLRASIVV----KCLEIVSELHGLAIKLGFGRSSALIR 253
Query: 381 GLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKAT-TSIA 439
SL+N Y G++ +KL + D ++ I G +++ TS A
Sbjct: 254 ---------SLVNAYVKCGSLANAWKLHEGTKKR----DLLSCTALITGFSQQNNCTSDA 300
Query: 440 KGILLRMISSQ--------------CLTMPSYIIYDTL---IENCSYVEFKSAVG--LVK 480
I MI + C T+ S I + S + F A+G L+
Sbjct: 301 FDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLID 360
Query: 481 DFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
++ G + +A +A E M V+ + LI + R GN KA ++Y M H P
Sbjct: 361 MYAKSGEIEDAVLAFEEMKEKDVRS----WTSLIAGYGRHGNFEKAIDLYNRMEHERIKP 416
Query: 541 HMFSVLSLIHALYYDRKNSEMGWVIRNTL 569
+ + LSL+ A + + +E+GW I +T+
Sbjct: 417 NDVTFLSLLSACSHTGQ-TELGWKIYDTM 444
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 105/249 (42%), Gaps = 32/249 (12%)
Query: 150 FLPSVATYNKFITAYLSSERVEQALGIFSAMA---ERGLSPDLVSYNAVISKFCQDGELE 206
F P Y + Y+ + RV + AM +R PD V+Y V+S F G ++
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 207 KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR-GDVSPSNSTYTRL 265
+A ++ AE G+ + +TY+ L++ C Q + A DL EM + P +Y +
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 266 MYAYCLVGEFSMAFHLHDEMRHRGFLPD----------FVIQFSP--------------- 300
+ L+ + + A +EMR RG P F + P
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 301 ---SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAY 357
L+ +N L+ G C L +++A ++ M E G P+ +Y ++ G Q R+ A
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 358 ELKVEMDEK 366
L E+ E+
Sbjct: 650 LLWKEIKER 658
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 10/223 (4%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P V++ V+ M+ A++V+ EM R G+ + TYN L+ G CK + A +L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 108 YDQM-RVRGLSPNERTYMSLIDLLCTWWLDKAYKV--FNEMIASGFLPSVATYNKFITAY 164
+M G+ P+ +Y +ID C D A + FNEM G P+ +Y + A+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIID-GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF 568
Query: 165 LSSERVEQALGIFSA-MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
S + + A +F M + + DL+++N ++ +C+ G +E A + + E G P+
Sbjct: 569 AMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPN 628
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEM-----LRGDVSPSNST 261
TY +L + +A L+ E+ ++ +PS+S+
Sbjct: 629 VATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSS 671
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 36/257 (14%)
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD---VSPSNSTYTRLMYAYCLVGEFSMA 278
PD Y+ L++ G + + + M R D P TYT ++ A+ G A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 279 FHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPE-MGLSPDA 337
+ EM G + +T+N L+ G C ++D A +LR M E G+ PD
Sbjct: 472 RQVLAEMARMGV--------PANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDV 523
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-------------- 383
VSYN ++ G I + A EM + I + +Y +LM+ +
Sbjct: 524 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 583
Query: 384 ---------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
D + ++ L+ Y G ++ ++ M NG+ P+ T G NG+++
Sbjct: 584 MMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQAR 643
Query: 435 TTSIAKGILLRMISSQC 451
A +L + I +C
Sbjct: 644 KPGDAL-LLWKEIKERC 659
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 172/462 (37%), Gaps = 65/462 (14%)
Query: 152 PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI 211
P A +N + A + ++ +F M+E PD+++YN +I + G E + +
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 212 KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML--RGDV-----------SPS 258
++KGI T +L+ A G L A + M R D+
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAEDLKE 353
Query: 259 NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG-------FLPDFVIQ----------FSPS 301
+ + DE+ G LP+ V F+P
Sbjct: 354 KEEEEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPD 413
Query: 302 LVTFNALIHGLCSLERVDEALGILRGM---PEMGLSPDAVSYNTVLFGFCQIRELKKAYE 358
+ L+ G RV + +L M + PD V+Y TV+ F + +A +
Sbjct: 414 SRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQ 473
Query: 359 LKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRN-GYL 417
+ EM + M ++ +TY+ LL Y Q + + L REMT + G
Sbjct: 474 VLAEM-------------ARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIE 520
Query: 418 PDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVG 477
PD V+ + I+G ++ A M + P+ I Y TL+
Sbjct: 521 PDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGI--APTKISYTTLM------------- 565
Query: 478 LVKDFSTRGLVNEA-AIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHY 536
K F+ G A + E M++ VK D +N+L+ +CR G + A + M
Sbjct: 566 --KAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKEN 623
Query: 537 GFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSE 578
GF+P++ + SL + + RK + + + C + E
Sbjct: 624 GFYPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKE 665
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 8/245 (3%)
Query: 49 YLVSFKGVIK--ELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
Y KG +K + + RM EA +R + + PD TY ++ M A +
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEA---MRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQ 473
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIA-SGFLPSVATYNKFITAY 164
+ +M G+ N TY L+ C +D+A + EM +G P V +YN I
Sbjct: 474 VLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGC 533
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV-EKGILPD 223
+ + AL F+ M RG++P +SY ++ F G+ + A + E + + + D
Sbjct: 534 ILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVD 593
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
+ ++ L++ C G + +A + M P+ +TY L + A L
Sbjct: 594 LIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWK 653
Query: 284 EMRHR 288
E++ R
Sbjct: 654 EIKER 658
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 142/320 (44%), Gaps = 16/320 (5%)
Query: 69 AKEVVREMNRKGLAPDCET-YNALICGM---CKVRN--MLCAVELYDQMRVRGLSPNERT 122
AK V + + PD T N IC C V+N + ++L+DQM+ GL P+ T
Sbjct: 144 AKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVT 203
Query: 123 YMSLID--LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
Y +L+ + KA ++ E+ +G Y + S+ R E+A M
Sbjct: 204 YNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQM 263
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
G SP++ Y+++++ + G+ +KA E+ E G++P+ V + L++ G
Sbjct: 264 KVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLF 323
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+ +L E+ + + Y LM G+ A + D+M+ +G D ++
Sbjct: 324 DRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD---GYAN 380
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELK 360
S+ +I LC +R EA + R D V NT+L +C+ E++ +
Sbjct: 381 SI-----MISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMM 435
Query: 361 VEMDEKIIWLDEYTYESLME 380
+MDE+ + D T+ L++
Sbjct: 436 KKMDEQAVSPDYNTFHILIK 455
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 147/351 (41%), Gaps = 42/351 (11%)
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
++L++ M+ G + TY S I + + KA +++ + +V N ++
Sbjct: 118 IQLFEWMQQHG-KISVSTYSSCIKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCL 176
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ-DGELEKALEIKAETVEKGILPD 223
+ + +++ + +F M GL PD+V+YN +++ + KA+E+ E GI D
Sbjct: 177 VKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMD 236
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHD 283
V Y ++ G EA + +M SP+ Y+ L+ +Y G++ A L
Sbjct: 237 SVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMT 296
Query: 284 EMRHRGFLPDFVIQ---------------------------FSPSLVTFNALIHGLCSLE 316
EM+ G +P+ V+ ++ + + + L+ GL
Sbjct: 297 EMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAG 356
Query: 317 RVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYE 376
+++EA I M G+ D + + ++ C+ + K+A EL + E TYE
Sbjct: 357 KLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRD--------SETTYE 408
Query: 377 SLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFI 427
D V +++L Y G M+ V ++ ++M PD T + I
Sbjct: 409 K-----CDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 9/278 (3%)
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLD-KAYKVFNEM 145
YN +I + K + A + + + G + +TY +L+ L L KA++++ M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGEL 205
+ L +TY I + S R++ A +F M ER L P +++++ + G L
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 206 EKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRL 265
+ ++++ E G P + +LI + G L A L+ EM + P+ YT +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 266 MYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL 325
+ ++ G+ +A + +M GFLP +PS T++ L+ +VD A+ I
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLP------TPS--TYSCLLEMHAGSGQVDSAMKIY 476
Query: 326 RGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
M GL P SY ++L R + A ++ +EM
Sbjct: 477 NSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
+A E+ M + D TY +I + K + A +L+ QM+ R L P+ + SL+
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 128 DLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
D + LD + KV+ EM G PS + I +Y + +++ AL ++ M + G
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFR 415
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
P+ Y +I + G+LE A+ + + + G LP TYS L++ G + A +
Sbjct: 416 PNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Query: 247 FLEMLRGDVSPSNSTYTRLM 266
+ M + P S+Y L+
Sbjct: 476 YNSMTNAGLRPGLSSYISLL 495
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 115/294 (39%), Gaps = 21/294 (7%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
S YN+ I +E++E A F E G D +YN ++ F G KA EI
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
+ L D TY +I +L G L AF LF +M + PS S ++ L+ +
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
G + ++ EM+ G PS F +LI ++D AL + M + G
Sbjct: 362 GRLDTSMKVYMEMQGFG--------HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSG 413
Query: 333 LSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLL 392
P+ Y ++ + +L+ A + +M++ L TYS LL
Sbjct: 414 FRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF-------------LPTPSTYSCLL 460
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
+ G + K+ MT G P + + L K +A ILL M
Sbjct: 461 EMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 91/186 (48%), Gaps = 5/186 (2%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
++ P F ++ + + R++ + +V EM G P + +LI K + A
Sbjct: 343 KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTA 402
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+ L+D+M+ G PN Y +I+ + L+ A VF +M +GFLP+ +TY+ +
Sbjct: 403 LRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEM 462
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA----LEIKAETVEKG 219
+ S +V+ A+ I+++M GL P L SY ++++ ++ A LE+KA
Sbjct: 463 HAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Query: 220 ILPDDV 225
+ DV
Sbjct: 523 VCASDV 528
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 97/253 (38%), Gaps = 32/253 (12%)
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELK 360
S +N +I L E+++ A + E G D +YN ++ F KA+E+
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 361 VEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDS 420
M++ LD TYE ++ L+ G + FKL ++M P
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKS-------------GRLDAAFKLFQQMKERKLRPSF 348
Query: 421 VTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVK 480
++ + K + + + M PS ++ V L+
Sbjct: 349 SVFSSLVDSMGKAGRLDTSMKVYMEM--QGFGHRPSATMF---------------VSLID 391
Query: 481 DFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFF- 539
++ G ++ A + M +P+ +Y ++I H + G + A ++K+M GF
Sbjct: 392 SYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLP 451
Query: 540 -PHMFSVLSLIHA 551
P +S L +HA
Sbjct: 452 TPSTYSCLLEMHA 464
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 22/197 (11%)
Query: 105 VELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+EL+ +M RGL N TY +LI L D A ++F EM++ G P + TYN +
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 164 YLSSERVEQAL---------GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
+ ++E+AL +F +++ +G+ P++V+Y +IS FC+ G E+A + +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
E G LPD TY+ LI+A G + +L EM + STY LV +
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-------LVTD 173
Query: 275 FSMAFHLHDEMRHRGFL 291
LHD +GFL
Sbjct: 174 M-----LHDGRLDKGFL 185
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 140 KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
++F EM G + + TY I + + A IF M G+ PD+++YN ++
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 200 CQDGELEKALEIKAETVE-----------KGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
C++G+LEKAL A VE KG+ P+ VTY+ +I C +G EA+ LF
Sbjct: 62 CKNGKLEKAL--VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 249 EMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
+M P + TY L+ A+ G+ + + L EMR F D
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 164
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV----- 105
V++ +I+ L + + A+E+ +EM G+ PD TYN L+ G+CK + A+
Sbjct: 17 VTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKV 76
Query: 106 ----ELYDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKF 160
+L+ + ++G+ PN TY ++I C + ++AY +F +M G LP TYN
Sbjct: 77 EDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTL 136
Query: 161 ITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKAL 209
I A+L + + M + D +Y +++ DG L+K
Sbjct: 137 IRAHLRDGDKAASAELIKEMRSCRFAGDASTY-GLVTDMLHDGRLDKGF 184
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
+F M++RGL + V+Y +I Q G+ + A EI E V G+ PD +TY+ L+ LC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
G L +A + G+ + L + +G
Sbjct: 63 KNGKLEKAL--------------------------VAGKVEDGWDLFCSLSLKGV----- 91
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
P++VT+ +I G C +EA + R M E G PD+ +YNT++ + +
Sbjct: 92 ---KPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 148
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLSD 384
+ EL EM D TY + + L D
Sbjct: 149 SAELIKEMRSCRFAGDASTYGLVTDMLHD 177
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 88/196 (44%), Gaps = 30/196 (15%)
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+LF EM + + + TYT L+ G+ MA + EM G PD ++T
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPD--------IMT 53
Query: 305 FNALIHGLCSLERVDEAL---------GILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
+N L+ GLC ++++AL + + G+ P+ V+Y T++ GFC+ ++
Sbjct: 54 YNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEE 113
Query: 356 AYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
AY L +M E L D TY++L+ + G+ +L +EM
Sbjct: 114 AYTLFRKMKED-------------GPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 160
Query: 416 YLPDSVTLGVFINGLN 431
+ D+ T G+ + L+
Sbjct: 161 FAGDASTYGLVTDMLH 176
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 22/159 (13%)
Query: 382 LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGL--NKKATTSIA 439
+ + VTY++L+ F G+ ++ +EM +G PD +T + ++GL N K ++
Sbjct: 13 VGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALV 72
Query: 440 KGILLRMISSQC-LTM----PSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIA 494
G + C L++ P+ + Y T+I F +G EA
Sbjct: 73 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMISG---------------FCKKGFKEEAYTL 117
Query: 495 HERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
+M PD YN LI H R G+ + E+ KEM
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 178/414 (42%), Gaps = 53/414 (12%)
Query: 62 EKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
E R++ V M KG+ D TY +LI + ++ A+ L+++MR G P
Sbjct: 134 EAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVV 193
Query: 122 TYMSLIDLL-CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
+Y + + +L +++A +V+ EM+ S P+ TY + +++ + E+AL IF M
Sbjct: 194 SYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKM 253
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
E G+ PD + N +I+K + GE + E G++ + Y ++AL +
Sbjct: 254 QEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVV---LRYPIFVEALETLKAA 310
Query: 241 PEAFDLFLEMLRG-----------DVSPS-------NSTYTRLMYAYCLVGEFSMAFH-L 281
E+ DL E+ D +P+ NS +R++ + L+ + +A L
Sbjct: 311 GESDDLLREVNSHISVESLCSSDIDETPTAEVNDTKNSDDSRVISSVLLMKQNLVAVDIL 370
Query: 282 HDEMRHRGF-LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSY 340
++MR R L FV+ +A+I C R + A EMG+ +Y
Sbjct: 371 LNQMRDRNIKLDSFVV---------SAIIETNCDRCRTEGASLAFDYSLEMGIHLKKSAY 421
Query: 341 NTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY--------------------TYESLME 380
++ F + EL K E+ EM + L Y ++ L +
Sbjct: 422 LALIGNFLRSNELPKVIEVVKEMVKAQHSLGCYQGAMLIHRLGFGRRPRLAADVFDLLPD 481
Query: 381 GLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
Y++L++ Y + G+ +K K+ REM +P T V ++GL K +
Sbjct: 482 DQKGVAAYTALMDVYISAGSPEKAMKILREMREREIMPSLGTYDVLLSGLEKTS 535
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Query: 112 RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
+++G + TY +++D+ + Y VF+ M G L TY I SS V
Sbjct: 114 QIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDV 173
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
+ A+ ++ M + G P +VSY A + DG +E+A E+ E + + P+ TY+ L
Sbjct: 174 DGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVL 233
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
++ L G EA D+F +M V P + L+ GE S + M+ G
Sbjct: 234 MEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV 293
Query: 291 LPDFVIQFSPSLVTFNA 307
+ + I F +L T A
Sbjct: 294 VLRYPI-FVEALETLKA 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 135 LDKAYKVFNEMIA-SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
+ KA+ FN GF TY + + + R++ +F M E+G+ D V+Y
Sbjct: 102 MQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYT 161
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
++I G+++ A+ + E + G P V+Y+A ++ L G + EA +++ EMLR
Sbjct: 162 SLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRS 221
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
VSP+ TYT LM G+ A + +M+ G PD
Sbjct: 222 RVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPD 261
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 25/296 (8%)
Query: 88 YNALICGMCKVRNMLCAVELYDQMRVRGL-SPNERTYMSLIDLLCTWW-LDKAYKVFNEM 145
+N LI G ++ N + A LY +MRV GL P+ TY LI + T + + + +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGEL 205
I SGF + N + Y + V A +F M E+ DLV++N+VI+ F ++G+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK----DLVAWNSVINGFAENGKP 203
Query: 206 EKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRL 265
E+AL + E KGI PD T +L+ A G+L + + M++ ++ + + L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 266 MYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL 325
+ Y G A L DEM + + V++ +LI GL EA+ +
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDK------------NSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 326 RGMPEM-GLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
+ M GL P +++ +L+ +K+ +E M E EY E +E
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE------EYKIEPRIE 361
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 137/332 (41%), Gaps = 58/332 (17%)
Query: 227 YSALIQALCLQGSLPEAFDLFLEM-LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
++ LI+ G+ AF L+ EM + G V P TY L+ A + + + +H +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
GF +Q N+L+H + V A + MPE D V++N+V+
Sbjct: 148 IRSGFGSLIYVQ--------NSLLHLYANCGDVASAYKVFDKMPE----KDLVAWNSVIN 195
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME---------------------GLSD 384
GF + + ++A L EM+ K I D +T SL+ GL+
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 385 EVTYSSLLNDYFAQ-GNMQKVFKLEREMT-RNGYLPDSVTLGVFINGLNKKATTSIAKGI 442
+ S++L D +A+ G +++ L EM +N S+ +G+ +NG K+A
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIE------ 309
Query: 443 LLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMH-NM 501
L + + S +P I + ++ CS+ G+V E RM
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHC---------------GMVKEGFEYFRRMREEY 354
Query: 502 SVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
++P + ++ R G V KAYE K M
Sbjct: 355 KIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 39/205 (19%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
E LV++ VI E + EEA + EMN KG+ PD T +L+ K+ +
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
++ M GL+ N + L+DL Y
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDL----------------------------------YAR 269
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI-KAETVEKGILPDDV 225
RVE+A +F M ++ + VS+ ++I +G ++A+E+ K +G+LP ++
Sbjct: 270 CGRVEEAKTLFDEMVDK----NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEI 325
Query: 226 TYSALIQALCLQGSLPEAFDLFLEM 250
T+ ++ A G + E F+ F M
Sbjct: 326 TFVGILYACSHCGMVKEGFEYFRRM 350
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 15/230 (6%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+++A ++ M G PS ++N + +S++ ++ IF + + G+ D N
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+I C+ G LE AL++ E ++ P+ +T+S LI+ C +G EAF L M +
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
+ P T+ L+ G L + M+ +G P+ P T+ +++GL
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPN------PG--TYQEVLYGLLD 319
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+R EA ++ M G+ P +SY ++ G C+ + + VEMD
Sbjct: 320 KKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV-------VEMD 362
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 27/256 (10%)
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
R+ +A+ I M + G P S+N +++ ++ +I + G+ D +
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
LI+ LC G+L A L E + P+ T++ L+ +C G+F AF L + M
Sbjct: 207 ILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKE 266
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
PD +TFN LI GL RV+E + +L M G P+ +Y VL+G
Sbjct: 267 RIEPD--------TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLL 318
Query: 349 QIRELKKAYELKVEMDEKIIW---LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVF 405
+ K+ E K M + I W +Y+ ++ GL + T S + D+
Sbjct: 319 ---DKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE--TKSVVEMDWVL-------- 365
Query: 406 KLEREMTRNGYLPDSV 421
R+M +G++P ++
Sbjct: 366 ---RQMVNHGFVPKTL 378
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 9/242 (3%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFIT 162
A+E+ M G P+ +++ +++LL + L D+ +K+F G N I
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP 222
S +E AL + ++ P++++++ +I FC G+ E+A ++ ++ I P
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
D +T++ LI L +G + E DL M P+ TY ++Y A +
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMM 330
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
+M G P F+ ++ ++ GLC + V E +LR M G P + +
Sbjct: 331 SQMISWGMRPSFL--------SYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWK 382
Query: 343 VL 344
V+
Sbjct: 383 VV 384
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 10/186 (5%)
Query: 17 MNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREM 76
+N++I+G + + + E F + P +++F +I+ C K + EEA +++ M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDE-FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 77 NRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLD 136
++ + PD T+N LI G+ K + ++L ++M+V+G PN TY ++ L LD
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL----LD 319
Query: 137 K-----AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
K A ++ ++MI+ G PS +Y K + ++ V + + M G P +
Sbjct: 320 KKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLM 379
Query: 192 YNAVIS 197
+ V+
Sbjct: 380 WWKVVQ 385
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 32/250 (12%)
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
+PDF PS +FN +++ L S + DE I P++G+ DA N ++ G C+
Sbjct: 158 MPDFGCW--PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCES 215
Query: 351 RELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLERE 410
L+ A +L LDE+ + + + +T+S L+ + +G ++ FKL
Sbjct: 216 GNLEAALQL----------LDEFPQQ---KSRPNVMTFSPLIRGFCNKGKFEEAFKLLER 262
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYV 470
M + PD++T + I+GL KK +L RM C P +Y
Sbjct: 263 MEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPG-----------TYQ 311
Query: 471 EFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMY 530
E GL+ R L EA +M + ++P Y ++ C +V + +
Sbjct: 312 EV--LYGLLD--KKRNL--EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVL 365
Query: 531 KEMVHYGFFP 540
++MV++GF P
Sbjct: 366 RQMVNHGFVP 375
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 99/228 (43%), Gaps = 3/228 (1%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P SF ++ L + +E ++ + G+ D N LI G+C+ N+ A++L
Sbjct: 165 PSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
D+ + PN T+ LI C ++A+K+ M P T+N I+
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
RVE+ + + M +G P+ +Y V+ +A E+ ++ + G+ P ++
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
Y ++ LC S+ E + +M+ P + +++ C+V +
Sbjct: 345 YKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV--QCVVSK 390
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 150/326 (46%), Gaps = 21/326 (6%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R+ P ++ + +I+ LC++ R++E +++ + K P +L+ + + + +
Sbjct: 229 RIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEES 288
Query: 105 VELYDQMRVRGLSPNERTYMSLI-------DLLCTWWLDKAYKVFNEMIASGFLPSVATY 157
+ L ++ ++ + + Y ++ DL+ A KVF+EM+ GF + Y
Sbjct: 289 MSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLV------SARKVFDEMLQRGFSANSFVY 342
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
F+ V++A + S M E G+SP ++N +I F + G EK LE V
Sbjct: 343 TVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVT 402
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSM 277
+G++P ++ +++++ ++ A ++ + + P TY+ L+ + +
Sbjct: 403 RGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQ 462
Query: 278 AFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
A L EM +R + SP F +LI GLC+ +V+ L+ M + + P+A
Sbjct: 463 ALKLFYEMEYR--------KMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNA 514
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEM 363
Y+ ++ F +I + A + EM
Sbjct: 515 DIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 1/196 (0%)
Query: 57 IKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGL 116
++ CEK ++EA+ ++ EM G++P ET+N LI G + +E + M RGL
Sbjct: 346 VRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGL 405
Query: 117 SPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
P+ + ++ + +++A ++ + I GF+P TY+ I ++ ++QAL
Sbjct: 406 MPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALK 465
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
+F M R +SP + ++I C G++E + ++ I P+ Y ALI+A
Sbjct: 466 LFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQ 525
Query: 236 LQGSLPEAFDLFLEML 251
G A ++ EM+
Sbjct: 526 KIGDKTNADRVYNEMI 541
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 145/355 (40%), Gaps = 34/355 (9%)
Query: 134 WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG-IFSAMAERGLSPDLVSY 192
+L+ + VF + GF SV T N I Y S +++ + I+ ++ + P+ ++
Sbjct: 179 YLELGFDVFKRLCDCGFTLSVITLNTLI-HYSSKSKIDDLVWRIYECAIDKRIYPNEITI 237
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
+I C++G L++ +++ K LP + ++L+ + + + E+ L +L
Sbjct: 238 RIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLM 297
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
++ Y+ ++YA G+ A + DEM RG FS + + +
Sbjct: 298 KNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRG--------FSANSFVYTVFVRVC 349
Query: 313 CSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL------------- 359
C V EA +L M E G+SP ++N ++ GF + +K E
Sbjct: 350 CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSC 409
Query: 360 --------KVEMDEKIIWLDEYTYESLMEG-LSDEVTYSSLLNDYFAQGNMQKVFKLERE 410
V E + +E +S+ +G + DE TYS L+ + ++ + KL E
Sbjct: 410 SAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYE 469
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
M P I GL + L I + L P+ IYD LI+
Sbjct: 470 MEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYL--KIMKKRLIEPNADIYDALIK 522
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 4/204 (1%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
+V T +T + ++AL + E + D V+YN VI F G+L A +
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
E G+ PD +TY+++I C G + +A+ L EM + D ++ TY+R++ C
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
G+ A L EM D SP+ VT+ +I C RV+EAL +L M G
Sbjct: 249 GDMERALELLAEMEKE----DGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRG 304
Query: 333 LSPDAVSYNTVLFGFCQIRELKKA 356
P+ V+ ++ G + E KA
Sbjct: 305 CMPNRVTACVLIQGVLENDEDVKA 328
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 126/308 (40%), Gaps = 43/308 (13%)
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
D+A V + YN I + + A + M GL PD+++Y ++
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSM 206
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD- 254
I+ +C G+++ A + E + + + VTYS +++ +C G + A +L EM + D
Sbjct: 207 INGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDG 266
Query: 255 ---VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI--------------- 296
+SP+ TYT ++ A+C A + D M +RG +P+ V
Sbjct: 267 GGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDV 326
Query: 297 ----QFSPSLVT---------FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTV 343
+ LV F++ L ++R +EA I R M G+ PD ++ + V
Sbjct: 327 KALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHV 386
Query: 344 LFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQK 403
C + + L E+++K + + D ++ LL QGN +
Sbjct: 387 FRELCLLERYLDCFLLYQEIEKKDV-----------KSTIDSDIHAVLLLGLCQQGNSWE 435
Query: 404 VFKLEREM 411
KL + M
Sbjct: 436 AAKLAKSM 443
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 152/350 (43%), Gaps = 21/350 (6%)
Query: 45 RMEPYLVSFKG--VIKELCEKERM-EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNM 101
R E V+ K ++ LC + + +EA V+R+ + D YN +I ++
Sbjct: 122 RKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDL 181
Query: 102 LCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKF 160
A L +M GL P+ TY S+I+ C +D A+++ EM + + TY++
Sbjct: 182 NIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRI 241
Query: 161 ITAYLSSERVEQALGIFSAMAERG----LSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
+ S +E+AL + + M + +SP+ V+Y VI FC+ +E+AL +
Sbjct: 242 LEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMG 301
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML--RGDVSPSNSTYTRLMYAYCLVGE 274
+G +P+ VT LIQ + +A ++ L G VS S ++ + +
Sbjct: 302 NRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSE-CFSSATVSLIRMKR 360
Query: 275 FSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLS 334
+ A + M RG PD + + + LC LER + + + + + +
Sbjct: 361 WEEAEKIFRLMLVRGVRPDG--------LACSHVFRELCLLERYLDCFLLYQEIEKKDVK 412
Query: 335 P--DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL 382
D+ + +L G CQ +A +L M +K + L E ++E L
Sbjct: 413 STIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEAL 462
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 126/279 (45%), Gaps = 9/279 (3%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVR 74
V N++IR FA + ++ + + E + + P ++++ +I C ++++A + +
Sbjct: 166 VAYNLVIRLFADKGDLNIADMLIKE-MDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAK 224
Query: 75 EMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG----LSPNERTYMSLIDLL 130
EM++ + TY+ ++ G+CK +M A+EL +M +SPN TY +I
Sbjct: 225 EMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAF 284
Query: 131 C-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG-IFSAMAERGLSPD 188
C +++A V + M G +P+ T I L ++ +AL + + + G
Sbjct: 285 CEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSL 344
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
+++ + E+A +I + +G+ PD + S + + LCL + F L+
Sbjct: 345 SECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQ 404
Query: 249 EMLRGDVSPS--NSTYTRLMYAYCLVGEFSMAFHLHDEM 285
E+ + DV + + + L+ C G A L M
Sbjct: 405 EIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSM 443
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 32/199 (16%)
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
DEAL +LR PE + D V+YN V+ F +L A L EMD
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMD-------------- 192
Query: 379 MEGL-SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTS 437
GL D +TY+S++N Y G + ++L +EM+++ + +SVT + G+ K
Sbjct: 193 CVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDME 252
Query: 438 IAKGILLRMISSQ--CLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAH 495
A +L M L P+ + Y +I+ F + V EA +
Sbjct: 253 RALELLAEMEKEDGGGLISPNAVTYTLVIQA---------------FCEKRRVEEALLVL 297
Query: 496 ERMHNMSVKPDGAVYNLLI 514
+RM N P+ +LI
Sbjct: 298 DRMGNRGCMPNRVTACVLI 316
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 168/402 (41%), Gaps = 35/402 (8%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
S+ +++ L ++ +V++ M +G+ PD E + +V + A+EL+++
Sbjct: 153 SYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEES 212
Query: 112 RVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLP-SVATYNKFITAYLSSER 169
G+ + ++ +L+ LC + A VFN G +P +YN I+ +
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKLGE 270
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
VE+ + M E G PD +SY+ +I + G + ++EI KG +PD Y+A
Sbjct: 271 VEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNA 330
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRG 289
+I E+ + ML + P+ TY++L+ + S A + +EM RG
Sbjct: 331 MICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRG 390
Query: 290 FLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL----- 344
LP + LVT + + LCS A+ I + + G +Y +L
Sbjct: 391 VLP------TTGLVT--SFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442
Query: 345 FGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKV 404
FG C + L ++ EM E D YE +++GL G+++
Sbjct: 443 FGKCGM--LLNVWD---EMQESGYPSDVEVYEYIVDGLC-------------IIGHLENA 484
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRM 446
+ E R G+ P+ + L T +A + L++
Sbjct: 485 VLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKI 526
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 114/269 (42%), Gaps = 10/269 (3%)
Query: 18 NVMIRGFA----TESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVV 73
N+MI G++ E + ++ V FG P +S+ +I+ L R+ ++ E+
Sbjct: 259 NIMISGWSKLGEVEEMEKVLKEMVESGFG-----PDCLSYSHLIEGLGRTGRINDSVEIF 313
Query: 74 REMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCT 132
+ KG PD YNA+IC R+ ++ Y +M PN TY L+ L+
Sbjct: 314 DNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 133 WWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
+ A ++F EM++ G LP+ F+ S A+ I+ + G +Y
Sbjct: 374 RKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAY 433
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
++ + + G+ L + E E G D Y ++ LC+ G L A + E +R
Sbjct: 434 KLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMR 493
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
P+ Y+RL + +A+ L
Sbjct: 494 KGFCPNRFVYSRLSSKLMASNKTELAYKL 522
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 154/396 (38%), Gaps = 41/396 (10%)
Query: 149 GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKA 208
G V +Y+ + A + + + M G++PDL + F + + +A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
+E+ E+ G+ +++AL++ LC + + A +F +G++ + +Y ++
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISG 264
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
+ +GE + EM GF PD ++++ LI GL R+++++ I +
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPD--------CLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTY 388
G PDA YN ++ F R+ ++ M LDE +L TY
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRM------LDEECEPNLE-------TY 363
Query: 389 SSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMIS 448
S L++ + ++ EM G LP + + F+ L A I +
Sbjct: 364 SKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRK 423
Query: 449 SQC-LTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDG 507
+ C ++ +Y + L+K S G + M D
Sbjct: 424 AGCRISESAYKL------------------LLKRLSRFGKCGMLLNVWDEMQESGYPSDV 465
Query: 508 AVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMF 543
VY ++ C G++ A + +E + GF P+ F
Sbjct: 466 EVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRF 501
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 164/382 (42%), Gaps = 40/382 (10%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY-MSLI 127
A++V E+ ++G++ YN++I + +N + LYDQM + P+ T+ M++
Sbjct: 69 ARKVFDELPQRGVS----VYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIK 124
Query: 128 DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
L L+K V+ + + G+ V + + Y+ ++++A +F MA+R
Sbjct: 125 ACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR---- 180
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D++ + +++ F Q G+ KA+E E +G D V L+QA G +
Sbjct: 181 DVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVH 240
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
+ R + + T L+ Y VG +A + M + + V++ +
Sbjct: 241 GYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFK------------TAVSWGS 288
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
LI G ++A + M +G PD V+ VL Q+ LK + + ++
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 368 IWLDEYTYESLME------------------GLSDEVTYSSLLNDYFAQGNMQKVFKLER 409
+ LD T +LM+ G D V ++++++ Y GN Q+V L
Sbjct: 349 V-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFL 407
Query: 410 EMTRNGYLPDSVTLGVFINGLN 431
+MT + PD T ++ L+
Sbjct: 408 KMTESNIEPDHATFASLLSALS 429
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 138/381 (36%), Gaps = 60/381 (15%)
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
+A E REM +G D L+ + + ++ + GL N SL+
Sbjct: 200 KAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLV 259
Query: 128 DLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
D+ +++ A +VF+ M+ + ++ I+ + + +A M G
Sbjct: 260 DMYAKVGFIEVASRVFSRMM----FKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQ 315
Query: 187 PDLVSYNAVISKFCQDGELEK------------------------------ALEIKAETV 216
PDLV+ V+ Q G L+ AL E
Sbjct: 316 PDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIF 375
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
E D V ++ +I + G+ E LFL+M ++ P ++T+ L+ A G
Sbjct: 376 EHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVE 435
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
H M + + IQ PS + LI L RV+EAL ++ P
Sbjct: 436 QGQHWFSVM-----INKYKIQ--PSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPI 488
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
V+ +L G R L + + +++ D + +L++++F
Sbjct: 489 WVA---LLSGCINHRNLS---------------VGDIAANKILQLNPDSIGIQTLVSNFF 530
Query: 397 AQGNMQKVFKLEREMTRNGYL 417
A N K R++ RNG +
Sbjct: 531 ATANKWKEVAKVRKLMRNGAM 551
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 111/284 (39%), Gaps = 28/284 (9%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
+M+EA+ + +M ++ D + ++ G + L AVE Y +M+ G + +
Sbjct: 166 KMDEAEVLFGKMAKR----DVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVML 221
Query: 125 SLI----DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
L+ DL T V + +G +V + Y +E A +FS M
Sbjct: 222 GLLQASGDLGDT---KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM 278
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
+ VS+ ++IS F Q+G KA E E G PD VT ++ A GSL
Sbjct: 279 ----MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL 334
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+ +L+ V T T LM Y G S + + + + +
Sbjct: 335 KTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRK------------ 381
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
LV +N +I E + + M E + PD ++ ++L
Sbjct: 382 DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLL 425
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 130/281 (46%), Gaps = 10/281 (3%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P ++++ + + + E + V+++ + G+AP Y A I + + + A E
Sbjct: 255 KPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKE 314
Query: 107 LYDQMRVRGLSPNERTYM-SLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+ + + V G P + + +LI + D A + M+++G LP++ T +K
Sbjct: 315 VAEVI-VSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLC 373
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
++ + + + ++ +G +L SY+ +IS C+ G + ++ E ++G+ PD
Sbjct: 374 RHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVS 433
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y+ALI+A C + A L+ EM + +TY L+ GE + L D+M
Sbjct: 434 LYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKM 493
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILR 326
RG PD I S LI GLC +++ A+ + R
Sbjct: 494 LERGIEPDETIYMS--------LIEGLCKETKIEAAMEVFR 526
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 2/223 (0%)
Query: 67 EEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSL 126
+ A E + M G P T + L +C+ ++ Y+ + +G ++Y +
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 127 IDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
I LC + ++Y EM G P V+ YN I A +E + A ++ M G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
+L +YN +I K ++GE E++L + + +E+GI PD+ Y +LI+ LC + + A +
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAME 523
Query: 246 LFLE-MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+F + M R + + + + C G A L E H
Sbjct: 524 VFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLREREH 566
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/421 (20%), Positives = 170/421 (40%), Gaps = 36/421 (8%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID 128
A+++ +M KG++ + + I C+ + L D+++ L+ N S+I
Sbjct: 171 AQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNING----SIIA 226
Query: 129 LL-------CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMA 181
LL C+ +D A+ + E+ P Y A++ + + + +
Sbjct: 227 LLILHSLCKCSREMD-AFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKR 285
Query: 182 ERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP-DDVTYSALIQALCLQGSL 240
+ G++P Y A I L +A E+ AE + G P D+ ALI ++
Sbjct: 286 KLGVAPRSSDYRAFILDLISAKRLTEAKEV-AEVIVSGKFPMDNDILDALIGSVSAVDP- 343
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
A + + M+ P+ T ++L C + ++ + +G+ +
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSE------- 396
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELK 360
L +++ +I LC RV E+ L+ M + GL+PD YN ++ C+ ++ A +L
Sbjct: 397 -LQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLW 455
Query: 361 VEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDS 420
EM + ++ TY L+ LS+E G ++ +L +M G PD
Sbjct: 456 DEMFVEGCKMNLTTYNVLIRKLSEE-------------GEAEESLRLFDKMLERGIEPDE 502
Query: 421 VTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVK 480
I GL K+ A + + + T+ ++ + ++ CS A L++
Sbjct: 503 TIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLR 562
Query: 481 D 481
+
Sbjct: 563 E 563
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/481 (19%), Positives = 178/481 (37%), Gaps = 52/481 (10%)
Query: 77 NRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWL 135
+ G + D +Y+++ + R L+ Q++ + + Y SLID L+
Sbjct: 74 QQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKA 133
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
A+ V E ++G N+ + S + A +F M +G+S + + +
Sbjct: 134 QSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVY 193
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALI--QALCLQGSLPEAFDLFLEMLRG 253
I FC+ E + L + E V+K L + + AL+ +LC +AF + E+
Sbjct: 194 IGWFCRSSETNQLLRLVDE-VKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNI 252
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
D P Y + A+ + G + + R G +P + A I L
Sbjct: 253 DCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGV--------APRSSDYRAFILDLI 304
Query: 314 SLERVDEALG----ILRGMPEM-------------GLSPDA----VSYNTVLFGFCQIRE 352
S +R+ EA I+ G M + PD+ + Y IR
Sbjct: 305 SAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRT 364
Query: 353 LKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
L K + D+ + Y S S+ +YS +++ G +++ + +EM
Sbjct: 365 LSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMK 424
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC-LTMPSYIIYDTLIENCSYVE 471
+ G PD I K AK + M C + + +Y +
Sbjct: 425 KEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNV------------ 472
Query: 472 FKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYK 531
L++ S G E+ ++M ++PD +Y LI C+ + A E+++
Sbjct: 473 ------LIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFR 526
Query: 532 E 532
+
Sbjct: 527 K 527
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 3/236 (1%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC--AVELYD 109
+F +I LC ++ A E+VR M++ + D Y+ L+ +CK ++ C + +
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE 240
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
+R SP R Y ++ L K V N+M P + Y + ++ E
Sbjct: 241 DLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADE 300
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
+A +F + GL+PD+ +YN I+ C+ ++E AL++ + + G P+ VTY+
Sbjct: 301 DYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYN 360
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
LI+AL G L A L+ EM V+ ++ T+ ++ AY V E A L +E
Sbjct: 361 ILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 416
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 130/324 (40%), Gaps = 35/324 (10%)
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE- 204
++ F + + I AY S R+E+A+ +F + P + NA++ + +
Sbjct: 100 VSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQS 159
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTR 264
LE EI + G+ ++ T+ LI ALC G + A +L M + V Y+R
Sbjct: 160 LELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSR 219
Query: 265 LMYAYCLVGE---FSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA 321
L+ + C + F + +L D + R FSP L + ++ L R E
Sbjct: 220 LLSSVCKHKDSSCFDVIGYLEDLRKTR---------FSPGLRDYTVVMRFLVEGGRGKEV 270
Query: 322 LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG 381
+ +L M + PD V Y VL G + KA +L E+ + D YTY + G
Sbjct: 271 VSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYING 330
Query: 382 LSDE----------------------VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPD 419
L + VTY+ L+ G++ + L +EM NG +
Sbjct: 331 LCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRN 390
Query: 420 SVTLGVFINGLNKKATTSIAKGIL 443
S T + I+ + A G+L
Sbjct: 391 SHTFDIMISAYIEVDEVVCAHGLL 414
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R+EP LV + V++ + E +A ++ E+ GLAPD TYN I G+CK ++ A
Sbjct: 281 RVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGA 340
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
+++ M G PN TY LI L L +A ++ EM +G + T++ I+A
Sbjct: 341 LKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISA 400
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
Y+ + V A G+ + VIS+ C+ G +++A+E+ A V
Sbjct: 401 YIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 149/371 (40%), Gaps = 56/371 (15%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F+ VI R+EEA EV ++ P T NAL+ + + R L EL ++
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSL---ELVPEIL 167
Query: 113 VR----GLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
V+ G+ E T+ LID LC +D A ++ M + Y++ +++
Sbjct: 168 VKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKH 227
Query: 168 ERVE--QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+ +G + + SP L Y V+ + G ++ + + + + PD V
Sbjct: 228 KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLV 287
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y+ ++Q + P+A LF DE+
Sbjct: 288 CYTIVLQGVIADEDYPKADKLF-----------------------------------DEL 312
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
G PD + T+N I+GLC ++ AL ++ M ++G P+ V+YN ++
Sbjct: 313 LLLGLAPD--------VYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 364
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG---LSDEVTYSSLLNDYFAQGNMQ 402
+ +L +A L EM+ + + +T++ ++ + + V LL + F
Sbjct: 365 ALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFV 424
Query: 403 KVFKLEREMTR 413
K ++E ++R
Sbjct: 425 KSSRIEEVISR 435
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 1/208 (0%)
Query: 45 RMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCA 104
R P L + V++ L E R +E V+ +M + PD Y ++ G+ + A
Sbjct: 246 RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKA 305
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITA 163
+L+D++ + GL+P+ TY I+ LC ++ A K+ + M G P+V TYN I A
Sbjct: 306 DKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKA 365
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+ + + +A ++ M G++ + +++ +IS + + E+ A + E +
Sbjct: 366 LVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVK 425
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEML 251
+I LC +G + +A +L ++
Sbjct: 426 SSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 221/523 (42%), Gaps = 68/523 (13%)
Query: 63 KERMEEAK-EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNER 121
K +E K +V ++ + L DC +N ++ G K + ++ + MR+ +SPN
Sbjct: 181 KAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAV 240
Query: 122 TYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
T+ ++ + + L D ++ ++ SG + N ++ Y R + A +F M
Sbjct: 241 TFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM 300
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
+ D V++N +IS + Q G +E++L E + G+LPD +T+S+L+ ++ +L
Sbjct: 301 SR----ADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENL 356
Query: 241 PEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP 300
+ ++R +S + L+ AY SMA ++ + S
Sbjct: 357 EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN------------SV 404
Query: 301 SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT------VLFGFCQIREL- 353
+V F A+I G ++L + R + ++ +SP+ ++ + +L REL
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 354 ----KKAYELKVEMDEKIIWLDEY--------TYESLMEGLS--DEVTYSSLLNDYFAQG 399
KK ++ + + +I D Y YE + E LS D V+++S++
Sbjct: 465 GFIIKKGFDNRCNIGCAVI--DMYAKCGRMNLAYE-IFERLSKRDIVSWNSMITRCAQSD 521
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
N + R+M +G D V++ ++ + S K I MI ++ S +
Sbjct: 522 NPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKH---SLASDVY 578
Query: 460 YD-TLIE---NCSYVEFKSAVGLVKDFSTRGLVNEAAIA----------------HERMH 499
+ TLI+ C K+A+ + K + +V+ +I HE +
Sbjct: 579 SESTLIDMYAKCG--NLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVE 636
Query: 500 NMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVH-YGFFPH 541
++PD + +I C G+V++ ++ M YG P
Sbjct: 637 KSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQ 679
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 94/204 (46%), Gaps = 7/204 (3%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
+VS+ +I + + A ++ R+M G+ DC + +A + + + ++
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 110 QMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
M L+ + + +LID+ L A VF M ++ ++N I A +
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK----NIVSWNSIIAACGNHG 622
Query: 169 RVEQALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALE-IKAETVEKGILPDDVT 226
+++ +L +F M E+ G+ PD +++ +IS C G++++ + ++ T + GI P
Sbjct: 623 KLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEH 682
Query: 227 YSALIQALCLQGSLPEAFDLFLEM 250
Y+ ++ G L EA++ M
Sbjct: 683 YACVVDLFGRAGRLTEAYETVKSM 706
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/407 (19%), Positives = 159/407 (39%), Gaps = 58/407 (14%)
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEML 251
+N++IS F ++G L +AL + + G+ PD T+ L++A C+ + D + +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKA-CVALKNFKGIDFLSDTV 164
Query: 252 RGDVSPSNS-TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIH 310
N + L+ AY G+ + L D + + V +N +++
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK------------DCVIWNVMLN 212
Query: 311 GLCSLERVDEALGILRGMPEMGLSPDAVSYNTV---------------LFGFCQIRELKK 355
G +D + M +SP+AV+++ V L G + +
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDF 272
Query: 356 AYELK---VEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
+K + M K D+ + M +D VT++ +++ Y G M++ EM
Sbjct: 273 EGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMI 332
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEF 472
+G LPD++T + ++K K I C M I D F
Sbjct: 333 SSGVLPDAITFSSLLPSVSKFENLEYCKQI-------HCYIMRHSISLDI---------F 376
Query: 473 KSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
++ + F RG+ + + + D V+ +I + G + EM++
Sbjct: 377 LTSALIDAYFKCRGVS-----MAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRW 431
Query: 533 MVHYGFFPH---MFSVLSLIHALYYDRKNSEM-GWVIRNTLRS-CNL 574
+V P+ + S+L +I L + E+ G++I+ + CN+
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI 478
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 143/330 (43%), Gaps = 47/330 (14%)
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
+A+++F+E+ P +YN ++ Y+ + E+A F M + D S+N +I
Sbjct: 111 EAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMI 162
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF-LEMLRGDV 255
+ + + GE+EKA E+ +EK ++V+++A+I G L +A F + +RG V
Sbjct: 163 TGYARRGEMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV 218
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
+ +T ++ Y + +A + +M + +LVT+NA+I G
Sbjct: 219 A-----WTAMITGYMKAKKVELAEAMFKDM-----------TVNKNLVTWNAMISGYVEN 262
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
R ++ L + R M E G+ P++ ++ L G ++ L+ ++ + + + D
Sbjct: 263 SRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL 322
Query: 376 ESLME------------------GLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
SL+ D V ++++++ Y GN K L REM N
Sbjct: 323 TSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIR 382
Query: 418 PDSVTLGVFINGLNKKATTSIAKGILLRMI 447
PD +T + N +I M+
Sbjct: 383 PDWITFVAVLLACNHAGLVNIGMAYFESMV 412
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 165/398 (41%), Gaps = 77/398 (19%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
S+ +I + ME+A+E+ M K ++NA+I G + ++ A +
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSMMEKNEV----SWNAMISGYIECGDLEKASHFFKV 211
Query: 111 MRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
VRG+ + ++I + ++ A +F +M + ++ T+N I+ Y+ + R
Sbjct: 212 APVRGVV----AWTAMITGYMKAKKVELAEAMFKDMTVN---KNLVTWNAMISGYVENSR 264
Query: 170 VEQALGIFSAMAERGLSP-----------------------------------DLVSYNA 194
E L +F AM E G+ P D+ + +
Sbjct: 265 PEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTS 324
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+IS +C+ GEL A ++ E ++K D V ++A+I G+ +A LF EM+
Sbjct: 325 LISMYCKCGELGDAWKL-FEVMKK---KDVVAWNAMISGYAQHGNADKALCLFREMIDNK 380
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
+ P T+ ++ A G ++ + M + D+ ++ P + ++ L
Sbjct: 381 IRPDWITFVAVLLACNHAGLVNIGMAYFESM-----VRDYKVEPQPD--HYTCMVDLLGR 433
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+++EAL ++R MP P A + T+L G C++ K + L E+
Sbjct: 434 AGKLEEALKLIRSMP---FRPHAAVFGTLL-GACRV--------------HKNVELAEFA 475
Query: 375 YESLME-GLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
E L++ + Y L N Y ++ + V ++ + M
Sbjct: 476 AEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRM 513
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 107/228 (46%), Gaps = 13/228 (5%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER--GLSPDLVSY 192
+ A + F +M G S ++N + A L S+ ++ +F + +R + PD +SY
Sbjct: 118 FNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISY 177
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
+I +C G EKA+EI + KG+ + ++ ++ +L +G L A +L+ EM++
Sbjct: 178 GILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVK 237
Query: 253 GDVSPSNSTYT-RLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
N+ Y R+M A E L +EM G PD +++N L+
Sbjct: 238 KGCELDNAAYNVRIMSAQKESPE--RVKELIEEMSSMGLKPD--------TISYNYLMTA 287
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
C +DEA + G+ +P+A ++ T++F C R ++ Y +
Sbjct: 288 YCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAI 335
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 129/286 (45%), Gaps = 15/286 (5%)
Query: 44 LRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC 103
++ EP+ + +I+ + A +M++ G ++NAL+ +N
Sbjct: 99 IKEEPF---YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDK 155
Query: 104 AVELYDQM--RVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKF 160
+L+D++ R + P++ +Y LI C + +KA ++ +M G + +
Sbjct: 156 VPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTI 215
Query: 161 ITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI 220
+++ +E A +++ M ++G D +YN I Q E+ E+ E G+
Sbjct: 216 LSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGL 274
Query: 221 LPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFH 280
PD ++Y+ L+ A C +G L EA ++ + + +P+ +T+ L++ C + +
Sbjct: 275 KPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYA 334
Query: 281 LHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILR 326
+ + + +PDF T L+ GL ++ D+A G++R
Sbjct: 335 IFKKSVYMHKIPDF--------NTLKHLVVGLVENKKRDDAKGLIR 372
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 14/273 (5%)
Query: 88 YNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL-LCTWWLDKAYKVFNEMI 146
Y+ LI + A+ ++QM G + ++ +L++ L + DK ++F+E+
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 147 A--SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGE 204
+ +P +Y I +Y S E+A+ I M +G+ +++ ++S + GE
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 205 LEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAF-DLFLEMLRGDVSPSNSTYT 263
LE A + E V+KG D+ Y+ I + Q PE +L EM + P +Y
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRI--MSAQKESPERVKELIEEMSSMGLKPDTISYN 282
Query: 264 RLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALG 323
LM AYC G A +++ + +P+ TF LI LC ++
Sbjct: 283 YLMTAYCERGMLDEAKKVYEGLEGNNC--------APNAATFRTLIFHLCYSRLYEQGYA 334
Query: 324 ILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
I + M PD + ++ G + ++ A
Sbjct: 335 IFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDA 367
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 161/388 (41%), Gaps = 57/388 (14%)
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQ----ALCLQGSLPEAFD 245
+S + S ++ + +KAL+I A + P Y+ + A C + S +
Sbjct: 31 ISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFS---DIE 87
Query: 246 LFLEMLRGDVSPSNST-YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP-SLV 303
+E + D Y+ L+ +Y F+ A ++M G +P S V
Sbjct: 88 TLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYG---------TPRSAV 138
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEM--GLSPDAVSYNTVLFGFCQIRELKKAYELKV 361
+FNAL++ + D+ + +P+ + PD +SY ++ +C +KA E+
Sbjct: 139 SFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMR 198
Query: 362 EMDEKIIWLDEYTYESLMEGLSDEVT---YSSLLNDYFAQGNMQKVFKLEREMTRNGYLP 418
+M +G EVT ++++L+ + +G ++ L EM + G
Sbjct: 199 QM----------------QGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCEL 242
Query: 419 DSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGL 478
D+ V I K++ + + L+ +SS L P I Y+ L+ +Y E
Sbjct: 243 DNAAYNVRIMSAQKESPERVKE--LIEEMSSMGLK-PDTISYNYLM--TAYCE------- 290
Query: 479 VKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGF 538
RG+++EA +E + + P+ A + LIF C + Y ++K+ V+
Sbjct: 291 ------RGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHK 344
Query: 539 FPHMFSVLSLIHALYYDRKNSEMGWVIR 566
P ++ L+ L ++K + +IR
Sbjct: 345 IPDFNTLKHLVVGLVENKKRDDAKGLIR 372
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 61 CEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC-AVELYDQMRVRGLSPN 119
+KE E KE++ EM+ GL PD +YN L+ C+ R ML A ++Y+ + +PN
Sbjct: 254 AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCE-RGMLDEAKKVYEGLEGNNCAPN 312
Query: 120 ERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFS 178
T+ +LI LC L ++ Y +F + + +P T + + +++ + A G+
Sbjct: 313 AATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIR 372
Query: 179 AMAER 183
+ ++
Sbjct: 373 TVKKK 377
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER--GLSPDLVSY 192
D A K+F EM G +V ++N + A L S+ E+ +F +R ++PD +SY
Sbjct: 118 FDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISY 177
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
+I +C G+ EKA+EI + KG+ + ++ ++ +L G + EA L++EM+
Sbjct: 178 GMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVN 237
Query: 253 GDVSPSNSTYT-RLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
N+ Y RLM A E L +EM G PD V++N L+
Sbjct: 238 KGCDLDNTVYNVRLMNAAKESPE--RVKELMEEMSSVGLKPD--------TVSYNYLMTA 287
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
C + EA + G+ + P+A ++ T++F C
Sbjct: 288 YCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLC 320
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRK--GLAPDCETYNALICGMCKVRNMLCAVEL 107
+VSF ++ + E ++ E ++ + PD +Y LI C A+E+
Sbjct: 137 VVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEI 196
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW----LDKAYKVFNEMIASGFLPSVATYNKFI-- 161
M V+G+ E T ++ +L + + +D+A ++ EM+ G YN +
Sbjct: 197 MRDMEVKGV---EVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVRLMN 253
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
A S ERV++ + M+ GL PD VSYN +++ +C G + +A ++ E +E+
Sbjct: 254 AAKESPERVKE---LMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKV-YEGLEQ--- 306
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLF 247
P+ T+ LI LC+ G + +F
Sbjct: 307 PNAATFRTLIFHLCINGLYDQGLTVF 332
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 63 KERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC-AVELYDQMRVRGLSPNER 121
KE E KE++ EM+ GL PD +YN L+ C V+ M+ A ++Y+ + PN
Sbjct: 256 KESPERVKELMEEMSSVGLKPDTVSYNYLMTAYC-VKGMMSEAKKVYEGLE----QPNAA 310
Query: 122 TYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
T+ +LI LC L D+ VF + +P T + + R+E A G+ + +
Sbjct: 311 TFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGV-ARI 369
Query: 181 AERGLSPDLVS 191
++ P LV+
Sbjct: 370 VKKKFPPRLVT 380
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 10/258 (3%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM-RVRGLSPNERTYM 124
++ + + R + + + ++ NAL+ ++ A +Y +M ++ G+ P+ TY
Sbjct: 127 LDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYN 186
Query: 125 SLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
+I +LC + +Y + EM P+ A++ I + E+ ++ + M E
Sbjct: 187 RMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEF 246
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
G+ + +YN +I C+ + +A + + + P+ VTYS LI C + +L EA
Sbjct: 247 GVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEA 306
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV 303
+LF M+ P + Y L++ C G+F A L E + ++P F +
Sbjct: 307 MNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSV------- 359
Query: 304 TFNALIHGLCSLERVDEA 321
L++GL S +VDEA
Sbjct: 360 -MKWLVNGLASRSKVDEA 376
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 11/251 (4%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER-GLSPDLVSYN 193
LD++ + F + +V + N + A L ++ ++A ++ M + G+ PDL +YN
Sbjct: 127 LDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYN 186
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+I C+ G + I AE K I P ++ +I + E + M
Sbjct: 187 RMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEF 246
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
V +TY ++ C + + A L D G + + P+ VT++ LIHG C
Sbjct: 247 GVHVGVATYNIMIQCLCKRKKSAEAKALID-----GVMS---CRMRPNSVTYSLLIHGFC 298
Query: 314 SLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEY 373
S E +DEA+ + M G PD+ Y T++ C+ + + A L E EK W+ +
Sbjct: 299 SEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEK-NWVPSF 357
Query: 374 TY-ESLMEGLS 383
+ + L+ GL+
Sbjct: 358 SVMKWLVNGLA 368
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 104/251 (41%), Gaps = 13/251 (5%)
Query: 121 RTYMSLIDLLCTWWLDKAYKVFNEMIAS-----GFLPSVATYNKFITAYLSSERVEQALG 175
RT SL LL + K YK N + G P + TYN+ I S +
Sbjct: 144 RTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYS 203
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
I + M + + P S+ +I F ++ + ++ ++ E G+ TY+ +IQ LC
Sbjct: 204 IVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLC 263
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
+ EA L ++ + P++ TY+ L++ +C A +L + M G+ PD
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
F+ LIH LC + AL + R E P ++ G ++ +
Sbjct: 324 CYFT--------LIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDE 375
Query: 356 AYELKVEMDEK 366
A EL + EK
Sbjct: 376 AKELIAVVKEK 386
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 20/189 (10%)
Query: 2 KLLRATLKSFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRM------EPYLVSFKG 55
K ++ T SF +MI GF KE+K E ++RM + ++
Sbjct: 211 KWIKPTAASF------GLMIDGFY-------KEEKFDEVRKVMRMMDEFGVHVGVATYNI 257
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
+I+ LC++++ EAK ++ + + P+ TY+ LI G C N+ A+ L++ M G
Sbjct: 258 MIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNG 317
Query: 116 LSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
P+ Y +LI LC + A + E + ++PS + + S +V++A
Sbjct: 318 YKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAK 377
Query: 175 GIFSAMAER 183
+ + + E+
Sbjct: 378 ELIAVVKEK 386
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 177/449 (39%), Gaps = 52/449 (11%)
Query: 97 KVRNMLCAVELYDQMRVRGLSPNERTYMSLID-LLCTWWLDKAYKVFNEMIASGFLPSVA 155
KVR+ A+EL+D MR GL PN S + LL + KA+ VF E + +
Sbjct: 122 KVRS---ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKENVTGH 177
Query: 156 TYNKFITAYLSSERVEQALGIFSAM---AERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
TY+ + A + E AL +F + +R D+V YN IS + + + I
Sbjct: 178 TYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIW 237
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
G + ++TYS L+ G A D++ EM+ +S ++ A
Sbjct: 238 RVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKE 297
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMG 332
++ +A + M +G P+LV N LI+ L +V + + +G
Sbjct: 298 EKWDLALKIFQSMLKKG--------MKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 333 LSPDAVSYNTVLFGFCQIRELKKAYEL-KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSL 391
PD ++N +L + + +L + E + L+EY Y + M V+ L
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAM------VSCQKL 403
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC 451
G +K KL EM +G + + + I+ K + +A + M C
Sbjct: 404 -------GYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDC 456
Query: 452 LTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYN 511
P+ Y +L+ +C + S V+D + V+PD ++YN
Sbjct: 457 --KPNTFTYLSLVRSCIW---GSLWDEVEDILKK-----------------VEPDVSLYN 494
Query: 512 LLIFDHCRRGNVNKAYEMYKEMVHYGFFP 540
I C R A E+Y +M G P
Sbjct: 495 AAIHGMCLRREFKFAKELYVKMREMGLEP 523
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 105/218 (48%), Gaps = 7/218 (3%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
M+P LV+ +I L + ++ +V + G PD T+NAL+ + K +
Sbjct: 315 MKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVL 374
Query: 106 ELYDQMRVRGLSP-NERTY-MSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITA 163
+L+D +R L NE Y +++ + +KA K+ EM SG S ++YN I+A
Sbjct: 375 QLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISA 434
Query: 164 YLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
S + + AL ++ MA+R P+ +Y +++ + C G L + E + K + PD
Sbjct: 435 CEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLV-RSCIWGSLWD----EVEDILKKVEPD 489
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
Y+A I +CL+ A +L+++M + P T
Sbjct: 490 VSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKT 527
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 161/409 (39%), Gaps = 65/409 (15%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVV 73
++R + + F M KE G T+ L+ +K + E + E A +
Sbjct: 152 LLRNGDIQKAFTVFEFMRKKENVTGHTYSLM------------LKAVAEVKGCESALRMF 199
Query: 74 REMNRKGLAPDC---ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
RE+ R+ C YN I ++ N+ ++ M+ G E TY L+ +
Sbjct: 200 RELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIF 259
Query: 131 CTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
+ A V++EM+ + I+A E+ + AL IF +M ++G+ P+L
Sbjct: 260 VRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNL 319
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL--------------- 234
V+ N +I+ + G++ ++ + G PD+ T++AL+ AL
Sbjct: 320 VACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDM 379
Query: 235 -------CLQ--------------GSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG 273
CL G +A L EM ++ S S+Y ++ A
Sbjct: 380 IRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSR 439
Query: 274 EFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
+ +A +++ M R P+ T+ +L+ DE IL+ +
Sbjct: 440 KSKVALLVYEHMAQR--------DCKPNTFTYLSLVRSCIWGSLWDEVEDILKK-----V 486
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL 382
PD YN + G C RE K A EL V+M E + D T +++ L
Sbjct: 487 EPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 155/337 (45%), Gaps = 34/337 (10%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVV 73
+V VMI GFA K+ + + E +VS+ ++ + E+A +
Sbjct: 198 VVSWTVMITGFA-----KVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLF 252
Query: 74 REMNRKGLAPDCETYNALICGMCKVRN----MLCAVELYDQMRVRGLSPNERTYMSLIDL 129
+M R G+ P+ ET ++ C R V+L D+ RVR L+ +T + +
Sbjct: 253 NDMLRLGVRPN-ETTWVIVISACSFRADPSLTRSLVKLIDEKRVR-LNCFVKTALLDMHA 310
Query: 130 LCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDL 189
C + A ++FNE+ G ++ T+N I+ Y + A +F M +R ++
Sbjct: 311 KCRD-IQSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR----NV 362
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKG-ILPDDVTYSALIQALCLQGSLPEAFDLFL 248
VS+N++I+ + +G+ A+E + ++ G PD+VT +++ A C + E D +
Sbjct: 363 VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSA-CGHMADLELGDCIV 421
Query: 249 EMLRGD-VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
+ +R + + ++S Y L++ Y G A + DEM+ R +V++N
Sbjct: 422 DYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER------------DVVSYNT 469
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
L + E L +L M + G+ PD V+Y +VL
Sbjct: 470 LFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVL 506
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 176/423 (41%), Gaps = 68/423 (16%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELCEK-ERMEEAKEVVREMN-RKGLAPDCETYNALICGMC 96
E G + +PY+ + VI ++ K E +E A++V +++ RKG +N +I G
Sbjct: 128 EKLGFFK-DPYV---RNVIMDMYVKHESVESARKVFDQISQRKG-----SDWNVMISGYW 178
Query: 97 KVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW----LDKAYKVFNEMIASGFLP 152
K N A +L+D M E +S ++ + L+ A K F+ M
Sbjct: 179 KWGNKEEACKLFDMM-------PENDVVSWTVMITGFAKVKDLENARKYFDRMPEK---- 227
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS--KFCQDGELEKALE 210
SV ++N ++ Y + E AL +F+ M G+ P+ ++ VIS F D L ++L
Sbjct: 228 SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLV 287
Query: 211 IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
+ EK + + +AL+ + A +F E+ + T+ ++ Y
Sbjct: 288 KLID--EKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYT 342
Query: 271 LVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPE 330
+G+ S A L D M R ++V++N+LI G + A+ M +
Sbjct: 343 RIGDMSSARQLFDTMPKR------------NVVSWNSLIAGYAHNGQAALAIEFFEDMID 390
Query: 331 MGLS-PDAVSYNTVL----------FGFC--------QIRELKKAYELKVEMDEK--IIW 369
G S PD V+ +VL G C QI+ Y + M + +W
Sbjct: 391 YGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLW 450
Query: 370 LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFING 429
+ ++ + E D V+Y++L + A G+ + L +M G PD VT +
Sbjct: 451 EAKRVFDEMKE--RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA 508
Query: 430 LNK 432
N+
Sbjct: 509 CNR 511
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 169/408 (41%), Gaps = 59/408 (14%)
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
P++ N++ F + L + + GI+PD ++ +I++ G L F
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL---FQA 125
Query: 247 FLEMLRGDVSPSNSTYTR--LMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
+E L P Y R +M Y A + D++ R
Sbjct: 126 LVEKLGFFKDP----YVRNVIMDMYVKHESVESARKVFDQISQR------------KGSD 169
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+N +I G +EA + MPE D VS+ ++ GF ++++L+ A + M
Sbjct: 170 WNVMISGYWKWGNKEEACKLFDMMPE----NDVVSWTVMITGFAKVKDLENARKYFDRMP 225
Query: 365 EKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
EK + V+++++L+ Y G + +L +M R G P+ T
Sbjct: 226 EKSV-----------------VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWV 268
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFST 484
+ I+ + +A S+ + L+++I + + + ++ L + + +SA + + T
Sbjct: 269 IVISACSFRADPSLTRS-LVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGT 327
Query: 485 -RGLVNEAAI--AHERMHNMSV---------KPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
R LV A+ + R+ +MS K + +N LI + G A E +++
Sbjct: 328 QRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFED 387
Query: 533 MVHYG-FFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLR--SCNLNDS 577
M+ YG P +++S++ A + + E+G I + +R LNDS
Sbjct: 388 MIDYGDSKPDEVTMISVLSACGH-MADLELGDCIVDYIRKNQIKLNDS 434
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 107/237 (45%), Gaps = 13/237 (5%)
Query: 15 VRMNVMIRGFATESVMSCKE-KKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVV 73
VR+N ++ + C++ + F L + LV++ +I M A+++
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 74 REMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLS-PNERTYMSLIDLLCT 132
M ++ + ++N+LI G A+E ++ M G S P+E T +S++ C
Sbjct: 355 DTMPKRNVV----SWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSA-CG 409
Query: 133 WWLDKAYK--VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
D + + + + + + Y I Y + +A +F M ER D+V
Sbjct: 410 HMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVV 465
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
SYN + + F +G+ + L + ++ ++GI PD VTY++++ A G L E +F
Sbjct: 466 SYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 138/315 (43%), Gaps = 20/315 (6%)
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT--- 132
M+ G+ P E + LI + + + ELY ++R R + LI L+
Sbjct: 337 MDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKK 396
Query: 133 WWLDKAYKVFNEMIASGFLPSVATYNKFITAY-----LSSERVEQALGI--FSAMAERGL 185
WW A +++ +++ G P+ +Y ++ + +S+R G+ + M ++GL
Sbjct: 397 WW--AALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGL 454
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
P +NAV+ + E A++I V+ G P ++Y AL+ AL EAF
Sbjct: 455 KPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFR 514
Query: 246 LFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
++ M++ + P+ YT + +F++ L EM +G PS+VTF
Sbjct: 515 VWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKG--------IEPSVVTF 566
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDE 365
NA+I G A M + P+ ++Y ++ + + AYEL V+
Sbjct: 567 NAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQN 626
Query: 366 KIIWLDEYTYESLME 380
+ + L Y+++++
Sbjct: 627 EGLKLSSKPYDAVVK 641
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 95/196 (48%), Gaps = 9/196 (4%)
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
++ +M KGL P +NA++ K A++++ M G P +Y +L+ L
Sbjct: 445 LLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALE 504
Query: 132 TWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
L D+A++V+N MI G P++ Y + ++ + MA +G+ P +V
Sbjct: 505 KGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVV 564
Query: 191 SYNAVISKFCQDGELEKALE----IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
++NAVIS ++G A E +K+E VE P+++TY LI+AL A++L
Sbjct: 565 TFNAVISGCARNGLSGVAYEWFHRMKSENVE----PNEITYEMLIEALANDAKPRLAYEL 620
Query: 247 FLEMLRGDVSPSNSTY 262
++ + S+ Y
Sbjct: 621 HVKAQNEGLKLSSKPY 636
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 204/523 (39%), Gaps = 74/523 (14%)
Query: 69 AKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG------LSPNERT 122
A +V + KG P + + A+I G K + + AV + D ++ + + PN
Sbjct: 131 ADDVDAVLKDKGELP-LQVFCAMIKGFGKDKRLKPAVAVVDWLKRKKSESGGVIGPNLFI 189
Query: 123 YMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
Y SL+ + +A K+ +M G +P++ TYN + Y+ +ALGI E
Sbjct: 190 YNSLLGAMRG--FGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKE 247
Query: 183 RGLSPDLVSYNA--VISKFCQDG--ELEKALEIKAETVEKGILPDDVTYS---------A 229
+G P+ ++Y+ ++ + +DG LE +E++ + ++ I +DV Y
Sbjct: 248 KGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREI-GNDVGYDWEFEFVKLEN 306
Query: 230 LIQALCLQ----------GSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAF 279
I +C Q L M V PS + RL++A + +
Sbjct: 307 FIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGK 366
Query: 280 HLHDEMRHRGFLPDFVIQFSP-SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAV 338
L+ +R R FS SL N LI + ++ AL I + + G P+ +
Sbjct: 367 ELYKRIRER---------FSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNL 417
Query: 339 SYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME--GLSDEVT-YSSLLNDY 395
SY V+ F + L A ++ IW + ME GL + ++++L
Sbjct: 418 SYELVVSHFNIL--LSAA-------SKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVAC 468
Query: 396 FAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP 455
++ + M NG P ++ G ++ L K A + MI + P
Sbjct: 469 SKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMI--KVGIEP 526
Query: 456 SYIIYDTLIENCS-YVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
+ Y T+ + +F L+K+ +++G ++P +N +I
Sbjct: 527 NLYAYTTMASVLTGQQKFNLLDTLLKEMASKG----------------IEPSVVTFNAVI 570
Query: 515 FDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRK 557
R G AYE + M P+ + LI AL D K
Sbjct: 571 SGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAK 613
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 125/556 (22%), Positives = 225/556 (40%), Gaps = 107/556 (19%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
++++L + ++ A++V EM K + N +I G K ++ A +L+D M
Sbjct: 54 IVEDLLRRGQVSAARKVYDEMPHKNTV----STNTMISGHVKTGDVSSARDLFDAM---- 105
Query: 116 LSPNERTYMSLIDLLCTWW-----LDKAYKVFNEMI--ASGFLPSVATYNKFITAYLSSE 168
+RT ++ +L W+ D+A+K+F +M +S LP T+ + ++
Sbjct: 106 ---PDRTVVTWT-ILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPG--CND 159
Query: 169 RVEQ-ALGIFSAMAER---GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
V Q A+G A A + +P L N ++ +C+ L+ A + E EK D
Sbjct: 160 AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK----DS 215
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VT++ LI G E+ LFL+M + PS+ T++ ++ A + +F++ LH
Sbjct: 216 VTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHAL 275
Query: 285 MRHRGFLPDF-----VIQF----------------SPSL--VTFNALIHGLCSLERVDEA 321
GF D ++ F P L V++N +I ++ + +
Sbjct: 276 SVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEAS 335
Query: 322 LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL---------------------- 359
L R M MG + T+L + L+ +L
Sbjct: 336 LHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDM 395
Query: 360 --KVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
K EM E+ E ++SL + + V++++L++ Y +G KL +M +
Sbjct: 396 YAKCEMFEEA----ELIFKSLPQRTT--VSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 418 PDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVG 477
D T + KA+ S A +L + + ++II +EN S G
Sbjct: 450 ADQSTFATVL-----KASASFASLLLGKQLH-------AFIIRSGNLENVF-----SGSG 492
Query: 478 LVKDFSTRGLVNEAAIAHERMHNMSVKPD--GAVYNLLIFDHCRRGNVNKAYEMYKEMVH 535
LV ++ G + +A E M PD +N LI H G+ A + +M+
Sbjct: 493 LVDMYAKCGSIKDAVQVFEEM------PDRNAVSWNALISAHADNGDGEAAIGAFAKMIE 546
Query: 536 YGFFPHMFSVLSLIHA 551
G P S+L ++ A
Sbjct: 547 SGLQPDSVSILGVLTA 562
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 171/371 (46%), Gaps = 40/371 (10%)
Query: 64 ERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY 123
E EEA+ + + + ++ ++ ALI G + ++L+ +MR L ++ T+
Sbjct: 400 EMFEEAELIFKSLPQRTTV----SWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 124 MSLIDLLCTW---WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAM 180
+++ ++ L K F +I SG L +V + + + Y ++ A+ +F M
Sbjct: 456 ATVLKASASFASLLLGKQLHAF--IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM 513
Query: 181 AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL 240
+R + VS+NA+IS +G+ E A+ A+ +E G+ PD V+ ++ A G +
Sbjct: 514 PDR----NAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569
Query: 241 PEAFDLFLEM--LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQF 298
+ + F M + G ++P Y ++ G F+ A L DEM F PD ++
Sbjct: 570 EQGTEYFQAMSPIYG-ITPKKKHYACMLDLLGRNGRFAEAEKLMDEM---PFEPDEIMWS 625
Query: 299 SPSLVTFNAL-IHGLCSL-ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
S NA IH SL ER E L + + DA +Y ++ + E +K
Sbjct: 626 S----VLNACRIHKNQSLAERAAEKLFSMEKLR------DAAAYVSMSNIYAAAGEWEKV 675
Query: 357 YELKVEMDEK-IIWLDEYTYESLMEGLSDEVTYSSLLNDY-FAQGN--MQKVFKLEREMT 412
++K M E+ I + Y++ + + +SS ND G+ ++K+ +L E+
Sbjct: 676 RDVKKAMRERGIKKVPAYSWVEVNHKIH---VFSS--NDQTHPNGDEIVRKINELTAEIE 730
Query: 413 RNGYLPDSVTL 423
R GY PD+ ++
Sbjct: 731 REGYKPDTSSV 741
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 6/202 (2%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
VS+ +I +K ++ +M L D T+ ++ ++L +L+
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 111 MRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
+ G N + L+D+ + A +VF EM + ++N I+A+ +
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR----NAVSWNALISAHADNGD 533
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE-IKAETVEKGILPDDVTYS 228
E A+G F+ M E GL PD VS V++ G +E+ E +A + GI P Y+
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 229 ALIQALCLQGSLPEAFDLFLEM 250
++ L G EA L EM
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEM 615
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P+L ++K CE R++ A + E+ K D T+N LI G K ++ L
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK----DSVTFNTLITGYEKDGLYTESIHL 237
Query: 108 YDQMRVRGLSPNERTYMSLIDL---LCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
+ +MR G P++ T+ ++ L + L + + + +GF + N+ + Y
Sbjct: 238 FLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALS--VTTGFSRDASVGNQILDFY 295
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE 210
+RV + +F M E D VSYN VIS + Q + E +L
Sbjct: 296 SKHDRVLETRMLFDEMPEL----DFVSYNVVISSYSQADQYEASLH 337
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 173/419 (41%), Gaps = 82/419 (19%)
Query: 10 SFRHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEA 69
SF+ M+ N ++ G + E + + +E VSF VI C + ++ A
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLA 295
Query: 70 KEVVREMNRKGLAPDCETYNALI-----CGMCKV----------RNMLC----------- 103
+++ ++G E N L+ CG+ + RN++
Sbjct: 296 RQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD 355
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLL-CTWWLDKAYKVFNEMIASGFLPSVATYNKFIT 162
AV ++ MR G+ PNE T++ LI+ + C + + K+ I +GF+ + N FIT
Sbjct: 356 AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFIT 415
Query: 163 AYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI----KAETVEK 218
Y E +E A F + R +++S+NA+IS F Q+G +AL++ AET
Sbjct: 416 LYAKFEALEDAKKAFEDITFR----EIISWNAMISGFAQNGFSHEALKMFLSAAAET--- 468
Query: 219 GILPDDVTYSALIQALCL-------QG-------------SLPEAFDLFLEML--RGDVS 256
+P++ T+ +++ A+ QG S P L+M RG++
Sbjct: 469 --MPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNID 526
Query: 257 PSNS-----------TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
S +T ++ AY G+F +L +M PD LVTF
Sbjct: 527 ESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPD--------LVTF 578
Query: 306 NALIHGLCSLERVDEALGILRGMPEM-GLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+++ VD+ I M E+ L P Y+ ++ + LK+A EL E+
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEV 637
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 102/435 (23%), Positives = 176/435 (40%), Gaps = 88/435 (20%)
Query: 131 CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
C L + ++ SGF V N + Y + R + AL IF + + PD+V
Sbjct: 88 CRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD----PDVV 143
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
S+N ++S F D ++ AL G++ D TYS + + C+ GS E F L L++
Sbjct: 144 SWNTILSGF-DDNQI--ALNFVVRMKSAGVVFDAFTYSTAL-SFCV-GS--EGFLLGLQL 196
Query: 251 --------LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSL 302
L D+ NS T Y G F A + DEM + +
Sbjct: 197 QSTVVKTGLESDLVVGNSFIT----MYSRSGSFRGARRVFDEMSFK------------DM 240
Query: 303 VTFNALIHGLCSLERVD-EALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL-------- 353
+++N+L+ GL EA+ I R M G+ D VS+ +V+ C +L
Sbjct: 241 ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHG 300
Query: 354 ---KKAYELKVEMDEKIIWLDEYTYESLMEGLS---------DEVTYSSLLNDYFAQGNM 401
K+ YE +E+ I + Y+ ++E + + V+++++++ N
Sbjct: 301 LCIKRGYESLLEVGN--ILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NK 353
Query: 402 QKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLR--MISSQCLTMPS--- 456
+ M +G P+ VT IN + K I +G+ + I + ++ PS
Sbjct: 354 DDAVSIFLNMRFDGVYPNEVTFVGLINAV--KCNEQIKEGLKIHGLCIKTGFVSEPSVGN 411
Query: 457 -----YIIYDTL------IENCSYVEFKSAVGLVKDFSTRGLVNEA-----AIAHERMHN 500
Y ++ L E+ ++ E S ++ F+ G +EA + A E M N
Sbjct: 412 SFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPN 471
Query: 501 MSVKPDGAVYNLLIF 515
G+V N + F
Sbjct: 472 EYTF--GSVLNAIAF 484
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 19/205 (9%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+D++ KVFNEM + I+AY S E + +F M + ++PDLV++ +
Sbjct: 525 IDESEKVFNEMSQKNQF----VWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLS 580
Query: 195 VISKFCQDGELEKALEIKAETVE-KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
V++ + G ++K EI +E + P YS ++ L G L EA +L E+ G
Sbjct: 581 VLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGG 640
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLV-TFNALIHGL 312
P S + M C LH ++ + + ++ P L ++ + +
Sbjct: 641 ---PGESML-QSMLGSC---------RLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIY 687
Query: 313 CSLERVDEALGILRGMPEMGLSPDA 337
E D+A I + M + +S +A
Sbjct: 688 AEKEEWDKAAEIRKAMRKKNVSKEA 712
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 100/491 (20%), Positives = 196/491 (39%), Gaps = 67/491 (13%)
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL-LCTWWLDKAYKV 141
PD ++N ++ G + A+ +M+ G+ + TY + + + + ++
Sbjct: 140 PDVVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 142 FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
+ ++ +G + N FIT Y S A +F M+ + D++S+N+++S Q
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK----DMISWNSLLSGLSQ 252
Query: 202 DGELE-KALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
+G +A+ I + + +G+ D V+++++I C + L A + ++
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE 312
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLP----------DFVIQF--------SPSL 302
LM Y G + +M R + D V F P+
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNE 372
Query: 303 VTFNALIHGLCSLERVDEALGILRGMPEMGLSPD---AVSYNTVLFGFCQIRELKKAYEL 359
VTF LI+ + E++ E L I + G + S+ T+ F + + KKA+E
Sbjct: 373 VTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE- 431
Query: 360 KVEMDEKIIW--------LDEYTYESL-------MEGLSDEVTYSSLLNDYFAQGNMQKV 404
+ E I W + +++E+L E + +E T+ S+LN +
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLN---------AI 482
Query: 405 FKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLI 464
E + G + L + GLN S A LL M + + S +++ +
Sbjct: 483 AFAEDISVKQGQRCHAHLLKL---GLNSCPVVSSA---LLDMYAKRGNIDESEKVFNEMS 536
Query: 465 ENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHC-RRGNV 523
+ +V ++ +S+ G +M +V PD + L + C R+G V
Sbjct: 537 QKNQFV----WTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF-LSVLTACNRKGMV 591
Query: 524 NKAYEMYKEMV 534
+K YE++ M+
Sbjct: 592 DKGYEIFNMMI 602
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 9/229 (3%)
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
+KA + F M +G +P TY+ + Y S +VE+ L ++ G PD ++++ +
Sbjct: 238 NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL 297
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
F + G+ + + E + P+ V Y+ L++A+ G A LF EML +
Sbjct: 298 GKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Query: 256 SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
+P+ T T L+ Y A L +EM+ + + DF++ +N L++ +
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFIL--------YNTLLNMCADI 409
Query: 316 ERVDEALGILRGMPE-MGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+EA + M E + PD SY +L + + +KA EL EM
Sbjct: 410 GLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEM 458
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 112/245 (45%), Gaps = 7/245 (2%)
Query: 17 MNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREM 76
++V + E V+S E+ V + +P ++F + K E + + V++EM
Sbjct: 263 LDVYSKSGKVEEVLSLYERAVATGW-----KPDAIAFSVLGKMFGEAGDYDGIRYVLQEM 317
Query: 77 NRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWL 135
+ P+ YN L+ M + A L+++M GL+PNE+T +L+ + W
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWA 377
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER-GLSPDLVSYNA 194
A +++ EM A + YN + E+A +F+ M E PD SY A
Sbjct: 378 RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTA 437
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+++ + G+ EKA+E+ E ++ G+ + + + L+Q L + + +F ++
Sbjct: 438 MLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Query: 255 VSPSN 259
V P +
Sbjct: 498 VKPDD 502
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 10/271 (3%)
Query: 68 EAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI 127
+A E M + GL PD TY+A++ K + + LY++ G P+ + L
Sbjct: 239 KAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLG 298
Query: 128 DLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLS 186
+ D V EM + P+V YN + A + + A +F+ M E GL+
Sbjct: 299 KMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLT 358
Query: 187 PDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDL 246
P+ + A++ + + AL++ E K D + Y+ L+ G EA L
Sbjct: 359 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 247 FLEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTF 305
F +M P N +YT ++ Y G+ A L +EM G +Q +++
Sbjct: 419 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG------VQV--NVMGC 470
Query: 306 NALIHGLCSLERVDEALGILRGMPEMGLSPD 336
L+ L +R+D+ + + + G+ PD
Sbjct: 471 TCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/290 (20%), Positives = 115/290 (39%), Gaps = 51/290 (17%)
Query: 177 FSAMAERGLSP-DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
F+ + + L P + + YN + + + E+ E V+ G+ D++TYS +I
Sbjct: 173 FNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAK 232
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD-- 293
+A + F M + + P TY+ ++ Y G+ L++ G+ PD
Sbjct: 233 RCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAI 292
Query: 294 -------------------FVIQ------FSPSLVTFNALIHGLCSLERVDEALGILRGM 328
+V+Q P++V +N L+ + + A + M
Sbjct: 293 AFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME-----GLS 383
E GL+P+ + ++ + + R + A +L EM K +D Y +L+ GL
Sbjct: 353 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLE 412
Query: 384 DEV------------------TYSSLLNDYFAQGNMQKVFKLEREMTRNG 415
+E +Y+++LN Y + G +K +L EM + G
Sbjct: 413 EEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 119/313 (38%), Gaps = 47/313 (15%)
Query: 245 DLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVT 304
++ LEM++ V N TY+ ++ ++ A + M G +PD VT
Sbjct: 207 EMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPD--------EVT 258
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
++A++ +V+E L + G PDA++++ + F + + + EM
Sbjct: 259 YSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMK 318
Query: 365 EKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
M+ + V Y++LL G L EM G P+ TL
Sbjct: 319 S-------------MDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFST 484
+ K A + M + + +I+Y+TL+ C+ +
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPM--DFILYNTLLNMCADI-------------- 409
Query: 485 RGLVNEAAIAHERMHN-----MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFF 539
GL EA ER+ N + +PD Y ++ + G KA E+++EM+ G
Sbjct: 410 -GLEEEA----ERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Query: 540 PHMFSVLSLIHAL 552
++ L+ L
Sbjct: 465 VNVMGCTCLVQCL 477
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 160/366 (43%), Gaps = 34/366 (9%)
Query: 86 ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW--WLDKAYKVFN 143
++YNA+I G + + A+ L+ ++ GL +E + +S + C L + +++
Sbjct: 348 QSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEIS-LSGVFRACALVKGLSEGLQIYG 406
Query: 144 EMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDG 203
I S V N I Y + + +A +F M R D VS+NA+I+ Q+G
Sbjct: 407 LAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNG 462
Query: 204 ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYT 263
+ + L + + I PD+ T+ ++++A C GSL ++ +++ ++ ++S
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGC 521
Query: 264 RLMYAYCLVGEFSMAFHLHDEMRHR----GFLPDFVIQFSPSL----VTFNALIHGLCSL 315
L+ Y G A +H R G + + + L V++N++I G
Sbjct: 522 SLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMK 581
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
E+ ++A + M EMG++PD +Y TVL + ++ ++ +K + D Y
Sbjct: 582 EQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYIC 641
Query: 376 ESLMEGLS------------------DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
+L++ S D VT+++++ Y G ++ +L M
Sbjct: 642 STLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIK 701
Query: 418 PDSVTL 423
P+ VT
Sbjct: 702 PNHVTF 707
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 121/589 (20%), Positives = 218/589 (37%), Gaps = 117/589 (19%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
+F V KE ++ +E K+ M G P N L+ R+ + A ++D+
Sbjct: 49 TNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDK 108
Query: 111 MRVRGL-SPNE--RTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
M +R + S N+ Y D+ KA FN M + V ++N ++ YL +
Sbjct: 109 MPLRDVVSWNKMINGYSKSNDMF------KANSFFNMMP----VRDVVSWNSMLSGYLQN 158
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFC---QDGELEKALEIKAETVEKGILPDD 224
+++ +F M G+ D ++ A+I K C +D L ++I V G D
Sbjct: 159 GESLKSIEVFVDMGREGIEFDGRTF-AIILKVCSFLEDTSL--GMQIHGIVVRVGCDTDV 215
Query: 225 VTYSALIQ------------------------------ALCLQGSLPE-AFDLFLEMLRG 253
V SAL+ A C+Q +L A F EM +
Sbjct: 216 VAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 275
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSP------------- 300
+ S S Y ++ + + E + LH F D +++ +
Sbjct: 276 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 335
Query: 301 ----------SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC-- 348
+ ++NA+I G E +AL + + GL D +S + V F C
Sbjct: 336 QILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGV-FRACAL 394
Query: 349 --------QIRELKKAYELKVEMDEKIIWLDEYTY-ESLMEGLS--------DEVTYSSL 391
QI L L +++ +D Y ++L E D V+++++
Sbjct: 395 VKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAI 454
Query: 392 LNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQC 451
+ + G + L M R+ PD T G + KA T + G + + SS
Sbjct: 455 IAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSIL-----KACTGGSLGYGMEIHSS-- 507
Query: 452 LTMPSYIIYDTLIEN----CSYVEFKSAVGLVKD-------FSTRGLVNEAAIAHERMHN 500
I+ + N CS ++ S G++++ F R V+ E+MHN
Sbjct: 508 ------IVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHN 561
Query: 501 MSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
++ +N +I + + A ++ M+ G P F+ +++
Sbjct: 562 KRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVL 610
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 138/344 (40%), Gaps = 67/344 (19%)
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL- 129
E + +M+ K L C ++N++I G A L+ +M G++P++ TY +++D
Sbjct: 554 EELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC 613
Query: 130 --LCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
L + L K ++ ++I V + + Y + + +F E+ L
Sbjct: 614 ANLASAGLGK--QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMF----EKSLRR 667
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D V++NA+I + G+ E+A+++ + + I P+ VT+ ++++A G + + + F
Sbjct: 668 DFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYF 727
Query: 248 LEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA 307
M R D+ + P L ++
Sbjct: 728 YMMKR----------------------------------------DYGLD--PQLPHYSN 745
Query: 308 LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKI 367
++ L +V AL ++R MP D V + T+L G C I + E+ E +
Sbjct: 746 MVDILGKSGKVKRALELIREMP---FEADDVIWRTLL-GVCTIH--RNNVEVAEEATAAL 799
Query: 368 IWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
+ LD D Y+ L N Y G +KV L R M
Sbjct: 800 LRLDP----------QDSSAYTLLSNVYADAGMWEKVSDLRRNM 833
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 156/406 (38%), Gaps = 57/406 (14%)
Query: 64 ERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTY 123
+ + EA V EM R+ D ++NA+I + + L+ M + P+E T+
Sbjct: 431 QALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 124 MSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
S++ L ++ + ++ SG + + I Y +E+A I S +R
Sbjct: 487 GSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQR 546
Query: 184 G----------------LSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
L VS+N++IS + + E A + +E GI PD TY
Sbjct: 547 ANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTY 606
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE--M 285
+ ++ S + ++++ ++ + L+ Y G+ LHD M
Sbjct: 607 ATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGD------LHDSRLM 660
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
+ DFV T+NA+I G + +EA+ + M + P+ V++ ++L
Sbjct: 661 FEKSLRRDFV--------TWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILR 712
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVT-YSSLLNDYFAQGNMQKV 404
+ + K E M GL ++ YS++++ G +++
Sbjct: 713 ACAHMGLIDKGLEYFYMMKRDY-------------GLDPQLPHYSNMVDILGKSGKVKRA 759
Query: 405 FKLEREMTRNGYLPDSVT----LGVFINGLNKKATTSIAKGILLRM 446
+L REM + D V LGV N A LLR+
Sbjct: 760 LELIREMP---FEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRL 802
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 223/516 (43%), Gaps = 89/516 (17%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVR-NMLCAVELY 108
+VS+ +I E +M +A +V EM + +YNA+I M K + ++ A EL+
Sbjct: 81 IVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT----SYNAMITAMIKNKCDLGKAYELF 136
Query: 109 DQMRVRGLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
+ + N +Y ++I + D+A ++ E F SVA+ N ++ YL +
Sbjct: 137 CDIPEK----NAVSYATMITGFVRAGRFDEAEFLYAETPVK-FRDSVAS-NVLLSGYLRA 190
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
+ +A+ +F MA + ++VS ++++ +C+ G + A + E+ + +T+
Sbjct: 191 GKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV----ITW 242
Query: 228 SALIQALCLQGSLPEAFDLFLEMLR-GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+A+I G + F LFL M + GDV NS +M+ C D +R
Sbjct: 243 TAMIDGYFKAGFFEDGFGLFLRMRQEGDVKV-NSNTLAVMFKAC-----------RDFVR 290
Query: 287 HR------GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSY 340
+R G + ++F L N+L+ L + EA + M + D+VS+
Sbjct: 291 YREGSQIHGLVSRMPLEFD--LFLGNSLMSMYSKLGYMGEAKAVFGVMK----NKDSVSW 344
Query: 341 NTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGN 400
N+++ G Q +++ +AYEL +M K D V+++ ++ + +G
Sbjct: 345 NSLITGLVQRKQISEAYELFEKMPGK-----------------DMVSWTDMIKGFSGKGE 387
Query: 401 MQKVFKLEREMTRNGYLPDSVTLGVFI-NGLNKKATTSIAKGILLRMISSQCLTMPSYII 459
+ K +L M + + + F+ NG ++A K +L + + T S +
Sbjct: 388 ISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHK-MLQKEVCPNSYTFSSVL- 445
Query: 460 YDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
SA + D E H R+ M++ D +V N L+ +C+
Sbjct: 446 --------------SATASLADLI------EGLQIHGRVVKMNIVNDLSVQNSLVSMYCK 485
Query: 520 RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYD 555
GN N AY+++ + P++ S ++I Y+
Sbjct: 486 CGNTNDAYKIFSCISE----PNIVSYNTMISGYSYN 517
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
++N IT + +++ +A +F M + D+VS+ +I F GE+ K +E+
Sbjct: 343 SWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVELFGMM 398
Query: 216 VEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
EK D++T++A+I A G EA F +ML+ +V P++ T++ ++ A + +
Sbjct: 399 PEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADL 454
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
+H + + D +Q N+L+ C ++A I + E P
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQ--------NSLVSMYCKCGNTNDAYKIFSCISE----P 502
Query: 336 DAVSYNTVLFGFCQIRELKKAYEL 359
+ VSYNT++ G+ KKA +L
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKL 526
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 18/239 (7%)
Query: 15 VRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPY--LVSFKGVIKELCEKERMEEAKEV 72
V N +I G + K++ E + L P +VS+ +IK K + + E+
Sbjct: 342 VSWNSLITGLV-------QRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVEL 394
Query: 73 VREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT 132
M K D T+ A+I A+ + +M + + PN T+ S++ +
Sbjct: 395 FGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATAS 450
Query: 133 WW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
L + ++ ++ + ++ N ++ Y A IFS ++E P++VS
Sbjct: 451 LADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNIVS 506
Query: 192 YNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
YN +IS + +G +KAL++ + G P+ VT+ AL+ A G + + F M
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 183/423 (43%), Gaps = 60/423 (14%)
Query: 11 FRHMVRMNVMIRGFATESVMSCKEKKVGETFG------LLRMEPYLVSFKGVIKELCEKE 64
+ +++ N+ + S+M+ +G T +L + + S+ ++K C
Sbjct: 290 YEDLLKENIKPNIYVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAG 349
Query: 65 RMEEAKEVVREMNR---KGLAP-DCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNE 120
R++ A+++ +E R GL D TY +I + A+++ D M+ G++PN
Sbjct: 350 RVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNT 409
Query: 121 RTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSA 179
T+ SLI L ++A +F EM+ASG P+ +N + A + + + ++A +F +
Sbjct: 410 HTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQS 469
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA---LCL 236
++ L + + ++SK G +K G L + + S IQA C
Sbjct: 470 WKGSSVNESLYA-DDIVSK----GRTSSPNILKNNG--PGSLVNRNSNSPYIQASKRFCF 522
Query: 237 QGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI 296
+ P+ +TY L+ A C ++ L DEM+ G
Sbjct: 523 K-------------------PTTATYNILLKA-CGT-DYYRGKELMDEMKSLG------- 554
Query: 297 QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
SP+ +T++ LI V+ A+ ILR M G PD V+Y T + + + LK A
Sbjct: 555 -LSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLA 613
Query: 357 YELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
+ L EM I + TY +L++ S Y SLL +++ + ++M GY
Sbjct: 614 FSLFEEMRRYQIKPNWVTYNTLLKARS---KYGSLL-------EVRQCLAIYQDMRNAGY 663
Query: 417 LPD 419
P+
Sbjct: 664 KPN 666
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 170/412 (41%), Gaps = 42/412 (10%)
Query: 92 ICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFL 151
+CG+C + + + +Y+ + + PN SL+++ + L KV+ M
Sbjct: 276 VCGLCG--DYVKSRYIYEDLLKENIKPNIYVINSLMNV-NSHDLGYTLKVYKNMQILDVT 332
Query: 152 PSVATYNKFITAYLSSERVEQALGIFSA---MAERGL-SPDLVSYNAVISKFCQDGELEK 207
+ +YN + + RV+ A I+ M GL D +Y +I F +
Sbjct: 333 ADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKW 392
Query: 208 ALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMY 267
AL++K + G+ P+ T+S+LI A G + +A LF EML P++ + L++
Sbjct: 393 ALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLH 452
Query: 268 AYCLVGEFSMAFHLHDEMR----HRGFLPDFVIQ----FSPSLVTFNALIHGLCSLERVD 319
A ++ AF L + + D ++ SP+++ N G SL +
Sbjct: 453 ACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNN----GPGSLVNRN 508
Query: 320 EALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
++ P +YN +L C Y K MDE +SL
Sbjct: 509 SNSPYIQASKRFCFKPTTATYN-ILLKACGT----DYYRGKELMDE---------MKSL- 553
Query: 380 EGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
GLS +++T+S+L++ G+++ ++ R M G PD V I + +
Sbjct: 554 -GLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKL 612
Query: 439 AKGILLRMISSQCLTMPSYIIYDTLIEN----CSYVEFKSAVGLVKDFSTRG 486
A + M Q P+++ Y+TL++ S +E + + + +D G
Sbjct: 613 AFSLFEEMRRYQ--IKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAG 662
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 118 PNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIF 177
P TY L+ T + + ++ +EM + G P+ T++ I S VE A+ I
Sbjct: 524 PTTATYNILLKACGTDYY-RGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRIL 582
Query: 178 SAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQ 237
M G PD+V+Y I ++ L+ A + E I P+ VTY+ L++A
Sbjct: 583 RTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKY 642
Query: 238 GSLPEA---FDLFLEMLRGDVSPSNSTYTRLMYAYC 270
GSL E ++ +M P++ L+ +C
Sbjct: 643 GSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWC 678
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 178/426 (41%), Gaps = 69/426 (16%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P LV+F L E + + E E++ + +N LI + + +V +
Sbjct: 122 PKLVTFYSAFNLLDEAQTITENSEILHPL----------PWNVLIGSYIRNKRFQESVSV 171
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYK--VFNEMIASGFLPSVATYNKFITAYL 165
Y +M +G+ +E TY S+I C LD AY V + S ++ N I+ Y
Sbjct: 172 YKRMMSKGIRADEFTYPSVIKA-CAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYK 230
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+V+ A +F M+ER D VS+NA+I+ + + +L +A ++ G+ V
Sbjct: 231 RFGKVDVARRLFDRMSER----DAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIV 286
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG--EFSMAFHL-- 281
T++ + G+ A + + M +V + + A +G ++ FH
Sbjct: 287 TWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLV 346
Query: 282 -------HD----------------EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERV 318
HD ++RH + F + SL T+N++I G ER
Sbjct: 347 IRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV--FQQVEANSLSTWNSIISGFAYNERS 404
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM-------DEKIIW-- 369
+E +L+ M G P+ ++ ++L F ++ L+ E + D I+W
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 370 -LDEYT-----------YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
+D Y ++S+ + D+VTY+SL++ Y G + ++M R+G
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRK--RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 418 PDSVTL 423
PD VT+
Sbjct: 523 PDHVTM 528
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 126/319 (39%), Gaps = 20/319 (6%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
VS+ +I +E++ EA +++ M G+ T+N + G + N + A+
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVG 310
Query: 111 MRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMI--ASGFLPSVATY-NKFITAYLSS 167
MR + ++ + K KVF+ ++ + F + N IT Y
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
+ A +F + LS ++N++IS F + E+ + E + G P+ +T
Sbjct: 371 SDLRHAFIVFQQVEANSLS----TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 228 SALIQALCLQGSLPEAFDLFLEMLR-GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
++++ G+L + +LR + L+ Y GE A + D MR
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
R VT+ +LI G L + + AL + M G+ PD V+ VL
Sbjct: 487 KR------------DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 347 FCQIRELKKAYELKVEMDE 365
+++ + L +M+
Sbjct: 535 CSHSNLVREGHWLFTKMEH 553
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 178/426 (41%), Gaps = 69/426 (16%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P LV+F L E + + E E++ + +N LI + + +V +
Sbjct: 122 PKLVTFYSAFNLLDEAQTITENSEILHPL----------PWNVLIGSYIRNKRFQESVSV 171
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYK--VFNEMIASGFLPSVATYNKFITAYL 165
Y +M +G+ +E TY S+I C LD AY V + S ++ N I+ Y
Sbjct: 172 YKRMMSKGIRADEFTYPSVIKA-CAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYK 230
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
+V+ A +F M+ER D VS+NA+I+ + + +L +A ++ G+ V
Sbjct: 231 RFGKVDVARRLFDRMSER----DAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIV 286
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVG--EFSMAFHL-- 281
T++ + G+ A + + M +V + + A +G ++ FH
Sbjct: 287 TWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLV 346
Query: 282 -------HD----------------EMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERV 318
HD ++RH + F + SL T+N++I G ER
Sbjct: 347 IRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIV--FQQVEANSLSTWNSIISGFAYNERS 404
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM-------DEKIIW-- 369
+E +L+ M G P+ ++ ++L F ++ L+ E + D I+W
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 370 -LDEYT-----------YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYL 417
+D Y ++S+ + D+VTY+SL++ Y G + ++M R+G
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRK--RDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 418 PDSVTL 423
PD VT+
Sbjct: 523 PDHVTM 528
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 126/319 (39%), Gaps = 20/319 (6%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
VS+ +I +E++ EA +++ M G+ T+N + G + N + A+
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVG 310
Query: 111 MRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMI--ASGFLPSVATY-NKFITAYLSS 167
MR + ++ + K KVF+ ++ + F + N IT Y
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
+ A +F + LS ++N++IS F + E+ + E + G P+ +T
Sbjct: 371 SDLRHAFIVFQQVEANSLS----TWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 228 SALIQALCLQGSLPEAFDLFLEMLR-GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
++++ G+L + +LR + L+ Y GE A + D MR
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMR 486
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
R VT+ +LI G L + + AL + M G+ PD V+ VL
Sbjct: 487 KR------------DKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSA 534
Query: 347 FCQIRELKKAYELKVEMDE 365
+++ + L +M+
Sbjct: 535 CSHSNLVREGHWLFTKMEH 553
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 160/400 (40%), Gaps = 41/400 (10%)
Query: 138 AYKVFNEMIASGFL-PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
A K+FN + + P TY K + ++ +QA +F M GL P + Y ++I
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLI 186
Query: 197 SKFCQDGELEKALE-IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
S + + L+KA ++ PD T++ LI C G + LEM V
Sbjct: 187 SVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGV 246
Query: 256 SPSNSTYTRLMYAYCLVGEF-SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
S TY ++ Y G F M L D + LPD + T N++I +
Sbjct: 247 GCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPD--------VCTLNSIIGSYGN 298
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
+ + MG+ PD ++N ++ F + KK + M+++ L
Sbjct: 299 GRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSL---- 354
Query: 375 YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKA 434
VTY+ ++ + G ++K+ + R+M G P+S+T +N +K
Sbjct: 355 ---------TTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG 405
Query: 435 TTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIA 494
+L ++++S ++ DT NC +A G D +T + E I
Sbjct: 406 LVVKIDSVLRQIVNSD-------VVLDTPFFNC----IINAYGQAGDLAT---MKELYI- 450
Query: 495 HERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV 534
+M KPD + +I + G + E+ K+M+
Sbjct: 451 --QMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMI 488
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 187/457 (40%), Gaps = 41/457 (8%)
Query: 4 LRATLKSFRHMVR-MNVMIRGFATESVMSCKEKKV-GETFGLLRMEPYLVSFKGVIKELC 61
+ + L S RH V + R T++ + E+K E + L + L + IKE
Sbjct: 64 MNSGLISTRHQVDPKKELSRILRTDAAVKGIERKANSEKYLTLWPKAVLEALDEAIKE-- 121
Query: 62 EKERMEEAKEVVREMNRKGL-APDCETYNAL--ICGMCKVRNMLCAVELYDQMRVRGLSP 118
R + A ++ + ++ P C+TY L + G CK + A L++ M GL P
Sbjct: 122 --NRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQ--ASLLFEVMLSEGLKP 177
Query: 119 NERTYMSLIDLLC-TWWLDKAYKVFNEMIA-SGFLPSVATYNKFITAYLSSERVEQALGI 176
Y SLI + + LDKA+ M + S P V T+ I+ R + I
Sbjct: 178 TIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSI 237
Query: 177 FSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG-ILPDDVTYSALIQALC 235
M+ G+ V+YN +I + + G E+ + A+ +E G LPD T +++I +
Sbjct: 238 VLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYG 297
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
++ + + V P +T+ L+ ++ G + + D M R F
Sbjct: 298 NGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFF----- 352
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKK 355
S + VT+N +I R+++ + R M G+ P++++Y C +
Sbjct: 353 ---SLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITY-------CSLVNAYS 402
Query: 356 AYELKVEMD---EKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
L V++D +I+ D + D ++ ++N Y G++ + +L +M
Sbjct: 403 KAGLVVKIDSVLRQIVNSDV---------VLDTPFFNCIINAYGQAGDLATMKELYIQME 453
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISS 449
PD +T I + + +MISS
Sbjct: 454 ERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISS 490
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 150/369 (40%), Gaps = 31/369 (8%)
Query: 104 AVELYDQMRVRGL-SPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLPSVATYNKF 160
A+++++ +R + P +TY L +L C D+A +F M++ G P++ Y
Sbjct: 127 ALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQ-PDQASLLFEVMLSEGLKPTIDVYTSL 185
Query: 161 ITAYLSSERVEQALGIFSAMAE-RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
I+ Y SE +++A M PD+ ++ +IS C+ G + I E G
Sbjct: 186 ISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLG 245
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR-GDVSPSNSTYTRLMYAYCLVGEFSMA 278
+ VTY+ +I G E + +M+ GD P T ++ +Y
Sbjct: 246 VGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKM 305
Query: 279 FHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAV 338
+ + G PD + TFN LI + ++ M + S V
Sbjct: 306 ESWYSRFQLMGVQPD--------ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV 357
Query: 339 SYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFA 397
+YN V+ F + ++K +D+ + +G+ + +TY SL+N Y
Sbjct: 358 TYNIVIETFGKAGRIEK--------------MDDVFRKMKYQGVKPNSITYCSLVNAYSK 403
Query: 398 QGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSY 457
G + K+ + R++ + + D+ IN + + K + ++M +C P
Sbjct: 404 AGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKC--KPDK 461
Query: 458 IIYDTLIEN 466
I + T+I+
Sbjct: 462 ITFATMIKT 470
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 118/317 (37%), Gaps = 42/317 (13%)
Query: 222 PDDVTYSALIQAL--CLQGSLPEAFDLFLE-MLRGDVSPSNSTYTRLMYAYCLVGEFSMA 278
P TY+ L + L C Q P+ L E ML + P+ YT L+ Y A
Sbjct: 142 PRCKTYTKLFKVLGNCKQ---PDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKA 198
Query: 279 FHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAV 338
F + M+ V P + TF LI C L R D I+ M +G+ V
Sbjct: 199 FSTLEYMKS-------VSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTV 251
Query: 339 SYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQ 398
+YNT++ G+ + ++ + +M E + L D T +S++ Y
Sbjct: 252 TYNTIIDGYGKAGMFEEMESVLADMIED------------GDSLPDVCTLNSIIGSYGNG 299
Query: 399 GNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYI 458
NM+K+ G PD T + I K G+ +M S +
Sbjct: 300 RNMRKMESWYSRFQLMGVQPDITTFNILILSFGK-------AGMYKKMCSVMDFMEKRFF 352
Query: 459 IYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHC 518
T+ N +++ F G + + +M VKP+ Y L+ +
Sbjct: 353 SLTTVTYNI----------VIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYS 402
Query: 519 RRGNVNKAYEMYKEMVH 535
+ G V K + +++V+
Sbjct: 403 KAGLVVKIDSVLRQIVN 419
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Query: 80 GLAPDCETYNALIC--GMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC-TWWLD 136
G+ PD T+N LI G + +C+V D M R S TY +I+ ++
Sbjct: 316 GVQPDITTFNILILSFGKAGMYKKMCSV--MDFMEKRFFSLTTVTYNIVIETFGKAGRIE 373
Query: 137 KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVI 196
K VF +M G P+ TY + AY + V + + + + D +N +I
Sbjct: 374 KMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCII 433
Query: 197 SKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
+ + Q G+L E+ + E+ PD +T++ +I+ G +L +M+ D+
Sbjct: 434 NAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 173/437 (39%), Gaps = 92/437 (21%)
Query: 40 TFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVR 99
T G EP++++ +I C+ + +A++V E + C YNALI G
Sbjct: 80 TKGGCETEPFVLT--ALISMYCKCGLVADARKVFEENPQSSQLSVC--YNALISGYTANS 135
Query: 100 NMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT----WWLDKAYKVFNEMIASGFLPSVA 155
+ A ++ +M+ G+S + T + L+ L CT WL ++ + + + G VA
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPL-CTVPEYLWLGRS--LHGQCVKGGLDSEVA 192
Query: 156 TYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAET 215
N FIT Y+ VE +F M +GL +++NAVIS + Q+G LE+ +
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVKGL----ITWNAVISGYSQNGLAYDVLELYEQM 248
Query: 216 VEKGILPDDVTYSALIQALCLQGS----------------LPEAF-------------DL 246
G+ PD T +++ + G+ +P F +L
Sbjct: 249 KSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNL 308
Query: 247 FLEMLRGDVSPSNS--TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD---FVIQFS-- 299
D+ P S ++T ++ Y + G + L D+M RG PD FV+ S
Sbjct: 309 AKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSAC 368
Query: 300 -----------------------PSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
P ++ L+ L R+DEA+ + MP + PD
Sbjct: 369 SHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP---VEPD 425
Query: 337 AVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYF 396
+ +L G C+I K + + E + ++E + + Y L+++ +
Sbjct: 426 GAVWGALL-GACKI--------------HKNVDMAELAFAKVIEFEPNNIGYYVLMSNIY 470
Query: 397 AQGNMQKVFKLEREMTR 413
+ Q+ R M R
Sbjct: 471 SDSKNQEGIWRIRVMMR 487
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 110/517 (21%), Positives = 201/517 (38%), Gaps = 57/517 (11%)
Query: 57 IKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGL 116
++EL + E+ + R M R G +PD ++ ++ + + +L+ + G
Sbjct: 25 LRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGC 84
Query: 117 SPNERTYMSLIDLLCTWWL-DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALG 175
+LI + C L A KVF E S L YN I+ Y ++ +V A
Sbjct: 85 ETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLS--VCYNALISGYTANSKVTDAAY 142
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
+F M E G+S D V+ ++ L + + V+ G+ + ++ I
Sbjct: 143 MFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYM 202
Query: 236 LQGSLPEAFDLFLEM-LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDF 294
GS+ LF EM ++G + T+ ++ Y G L+++M+ G PD
Sbjct: 203 KCGSVEAGRRLFDEMPVKGLI-----TWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDP 257
Query: 295 VIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELK 354
S ++ H +++ +G L + G P+ N + + + L
Sbjct: 258 FTLVS----VLSSCAH--LGAKKIGHEVGKL--VESNGFVPNVFVSNASISMYARCGNLA 309
Query: 355 KAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
KA + D +SL V++++++ Y G + L +M +
Sbjct: 310 KARAV----------FDIMPVKSL-------VSWTAMIGCYGMHGMGEIGLMLFDDMIKR 352
Query: 415 GYLPDSVTLGVFINGLNKKATTSIAKGI-LLRMISSQCLTMPSYIIYDTLIENCSYVEFK 473
G PD + ++ + T KG+ L R + + P Y L++
Sbjct: 353 GIRPDGAVFVMVLSACSHSGLTD--KGLELFRAMKREYKLEPGPEHYSCLVDL------- 403
Query: 474 SAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
G ++EA E + +M V+PDGAV+ L+ NV+ A + ++
Sbjct: 404 --------LGRAGRLDEAM---EFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKV 452
Query: 534 VHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLR 570
+ F P+ L+ +Y D KN E W IR +R
Sbjct: 453 IE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 487
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 184/439 (41%), Gaps = 75/439 (17%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+D+A +VFN++ + P V+ Y K IT Y S R+ AL +F M R D+VS+N+
Sbjct: 51 IDEAREVFNQVPS----PHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNS 102
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
+IS + G++ A+++ E E+ + V+++A++ G + +A LF +M D
Sbjct: 103 MISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVKD 158
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
+ NS +++ Y G+ A L +M + +++++ +I GL
Sbjct: 159 TAAWNS----MVHGYLQFGKVDDALKLFKQMPGK------------NVISWTTMICGLDQ 202
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWL---- 370
ER EAL + + M + + + V+ A+ + +++ II L
Sbjct: 203 NERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN----APAFHMGIQVHGLIIKLGFLY 258
Query: 371 DEYTYESLM-----------------EGLSDEVT-YSSLLNDYFAQGNMQKVFKLEREMT 412
+EY SL+ E + ++V +++LL+ Y + + M
Sbjct: 259 EEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGML 318
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEF 472
RN LP+ T F +GLN + A G L + + + D + N
Sbjct: 319 RNSILPNQST---FASGLN----SCSALGTLDWGKEMHGVAVKLGLETDAFVGN------ 365
Query: 473 KSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
LV +S G VN+A ++ S+ +N +I + G A+ ++ +
Sbjct: 366 ----SLVVMYSDSGNVNDAVSVFIKIFKKSI----VSWNSIIVGCAQHGRGKWAFVIFGQ 417
Query: 533 MVHYGFFPHMFSVLSLIHA 551
M+ P + L+ A
Sbjct: 418 MIRLNKEPDEITFTGLLSA 436
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 183/437 (41%), Gaps = 73/437 (16%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
R++EA+EV ++ +P Y +I G + ++ A+ L+D+M VR + ++
Sbjct: 50 RIDEAREVFNQVP----SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVV----SWN 101
Query: 125 SLID--LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
S+I + C ++ A K+F+EM SV ++ + S +V+QA +F M
Sbjct: 102 SMISGCVECG-DMNTAVKLFDEMPER----SVVSWTAMVNGCFRSGKVDQAERLFYQMPV 156
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE 242
+ D ++N+++ + Q G+++ AL++ + K + ++++ +I L E
Sbjct: 157 K----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV----ISWTTMICGLDQNERSGE 208
Query: 243 AFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSL 302
A DLF MLR + ++ +T ++ A F M +H + GFL + + S SL
Sbjct: 209 ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYV--SASL 266
Query: 303 VTF-------------------------NALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
+TF AL+ G ++ ++AL I GM + P+
Sbjct: 267 ITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQ 326
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL-SDEVTYSSLLNDYF 396
++ + L + L W E ++ GL +D +SL+ Y
Sbjct: 327 STFASGLNSCSALGTLD--------------WGKEMHGVAVKLGLETDAFVGNSLVVMYS 372
Query: 397 AQGNMQKVFKLEREMTRNGYLP-DSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP 455
GN+ + ++ + + +S+ +G +G K A + I L P
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN-------KEP 425
Query: 456 SYIIYDTLIENCSYVEF 472
I + L+ CS+ F
Sbjct: 426 DEITFTGLLSACSHCGF 442
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 160/402 (39%), Gaps = 68/402 (16%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALI--CGMCKVRNMLC 103
ME VS+ +IK L + +EA E REM +GL D + +++ CG L
Sbjct: 231 MEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGG------LG 284
Query: 104 AVELYDQMRVRGLSPNERTYM----SLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYN 158
A+ Q+ + N + ++ +LID+ C L A VF+ M +V ++
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWT 340
Query: 159 KFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEK 218
+ Y + R E+A+ IF M G+ PD + IS LE+ + + +
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS 400
Query: 219 GILPDDVTYSALIQALCLQGSLPEAFDLFLEM-LRGDVSPSNSTYTRLMYAYCLVGEFSM 277
G++ ++L+ G + ++ LF EM +R VS +T ++ AY G
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-----WTAMVSAYAQFGRAVE 455
Query: 278 AFHLHDEMRHRGFLPDFVI----------------------------QFSPSLVTFNALI 309
L D+M G PD V PS+ ++ +I
Sbjct: 456 TIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMI 515
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIW 369
R++EA+ + GMP PDA+ + T+L C+ K E+ E +I
Sbjct: 516 DLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSA-CRN---KGNLEIGKWAAESLIE 568
Query: 370 LDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
LD + Y+ L + Y ++G V +L R M
Sbjct: 569 LDPH----------HPAGYTLLSSIYASKGKWDSVAQLRRGM 600
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 87/438 (19%), Positives = 179/438 (40%), Gaps = 60/438 (13%)
Query: 157 YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
YN + L+ +E AL +F RG+ D VS+ A+I Q+G ++A+E E
Sbjct: 208 YNSLMGGLLACGMIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
+G+ D + +++ A G++ E + ++R + + L+ YC
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 277 MAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
A + D M+ + ++V++ A++ G R +EA+ I M G+ PD
Sbjct: 323 YAKTVFDRMKQK------------NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD 370
Query: 337 AVSYNTVLFGFCQIRELKKAYELK-----------VEMDEKIIWL-------DEYTYESL 378
+ + + L++ + V + ++ L D+ T
Sbjct: 371 HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFN 430
Query: 379 MEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSI 438
+ D V+++++++ Y G + +L +M ++G PD VTL I+ ++ +
Sbjct: 431 EMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL--V 488
Query: 439 AKGI-LLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHER 497
KG ++++S+ +PS Y +I+ FS G + EA
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDL---------------FSRSGRLEEAM---RF 530
Query: 498 MHNMSVKPDGAVYNLLIFDHCR-RGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDR 556
++ M PD + L+ CR +GN+ + ++ PH + +L+ ++Y +
Sbjct: 531 INGMPFPPDAIGWTTLL-SACRNKGNLEIGKWAAESLIE--LDPHHPAGYTLLSSIYASK 587
Query: 557 KNSEMGWVIRNTLRSCNL 574
+ +R +R N+
Sbjct: 588 GKWDSVAQLRRGMREKNV 605
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 106/486 (21%), Positives = 180/486 (37%), Gaps = 115/486 (23%)
Query: 152 PSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI 211
P YN + AY + A +F + + P+L S+N ++ + + G + +
Sbjct: 39 PETFLYNNIVHAYALMKSSTYARRVFDRIPQ----PNLFSWNNLLLAYSKAGLISEM--- 91
Query: 212 KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCL 271
T EK D VT++ LI+ L G + A + M+R D S +N T LM L
Sbjct: 92 -ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMR-DFS-ANLTRVTLMTMLKL 148
Query: 272 V---GEFSMAFHLHDEMRHRGFLPDFVIQFSPSL------------------------VT 304
G S+ +H ++ GF +++ SP L V
Sbjct: 149 SSSNGHVSLGKQIHGQVIKLGF-ESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+N+L+ GL + +++AL + RGM + D+VS+ ++ G Q K+A E EM
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 365 EKIIWLDEYTYESLM----------EG-----------LSDEVTYSSLLND--------- 394
+ + +D+Y + S++ EG D + S L D
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 395 -----------------------YFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
Y G ++ K+ +M R+G PD TLG I+
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 432 KKATTSIAKGILLRMISS---QCLTMPSYIIYDTLIENCSYVEFK-------------SA 475
++ + I+S +T+ + ++ TL C ++ S
Sbjct: 383 NVSSLEEGSQFHGKAITSGLIHYVTVSNSLV--TLYGKCGDIDDSTRLFNEMNVRDAVSW 440
Query: 476 VGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEMV- 534
+V ++ G E ++M +KPDG +I R G V K +K M
Sbjct: 441 TAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 535 HYGFFP 540
YG P
Sbjct: 501 EYGIVP 506
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 6/213 (2%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
VSF IK CE ++ A +REM + GL PD TY LI + K + L++
Sbjct: 178 VSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNL 237
Query: 111 MRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFL---PSVATYNKFITAYLSS 167
M ++G PN T+ I L +A+ + ++ L P TYN I + +
Sbjct: 238 MVLKGCKPNLTTFNVRIQFLVN--RRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLA 295
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
+ A +++AM +G P+L Y +I C+ G + A + + + K P+ T
Sbjct: 296 RFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTV 355
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNS 260
L++ L +G L +A + +E++ V P S
Sbjct: 356 EMLLKGLVKKGQLDQAKSI-MELVHRRVPPFRS 387
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 135 LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
LD AY EM SG P V TY I+A ER G+++ M +G P+L ++N
Sbjct: 193 LDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNV 252
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
I A ++ + + PD +TY+ +I+ L A ++ M
Sbjct: 253 RIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKG 312
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHL-HDEMRHRGFLPDFVIQFSPSLVTFNALIHGLC 313
P+ Y +++ C G F +A+ + D MR + + P+L T L+ GL
Sbjct: 313 YKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWY---------PNLDTVEMLLKGLV 363
Query: 314 SLERVDEALGIL 325
++D+A I+
Sbjct: 364 KKGQLDQAKSIM 375
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 102/259 (39%), Gaps = 47/259 (18%)
Query: 295 VIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELK 354
V+ F+P L T +H S + G+ DAVS+N + FC++ L
Sbjct: 150 VLSFNPDLHTIWEFLHDAPS---------------KYGIDIDAVSFNIAIKSFCELGILD 194
Query: 355 KAYELKVEMDEKIIWLDEYTYESLMEGLS-DEVTYSSLLNDYFAQGNMQKVFKLEREMTR 413
AY EM++ GL+ D VTY++L++ + L M
Sbjct: 195 GAYMAMREMEK--------------SGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVL 240
Query: 414 NGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEFK 473
G P+ T V I L + A +LL M Q P I Y+ +I+ F
Sbjct: 241 KGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQ--VEPDSITYNMVIKGFFLARFP 298
Query: 474 SAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKEM 533
D + R + MH KP+ +Y +I C+ GN + AY M K+
Sbjct: 299 -------DMAER--------VYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDC 343
Query: 534 VHYGFFPHMFSVLSLIHAL 552
+ ++P++ +V L+ L
Sbjct: 344 MRKKWYPNLDTVEMLLKGL 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 19/251 (7%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRK-GLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
SF ++ L + E + + K G+ D ++N I C++ + A +
Sbjct: 143 SFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMRE 202
Query: 111 MRVRGLSPNERTYMSLIDLLCTWWLDKAYK---------VFNEMIASGFLPSVATYNKFI 161
M GL+P+ TY +LI L YK ++N M+ G P++ T+N I
Sbjct: 203 MEKSGLTPDVVTYTTLISAL--------YKHERCVIGNGLWNLMVLKGCKPNLTTFNVRI 254
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
++ R A + M + + PD ++YN VI F + A + KG
Sbjct: 255 QFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYK 314
Query: 222 PDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHL 281
P+ Y +I LC G+ A+ + + +R P+ T L+ G+ A +
Sbjct: 315 PNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSI 374
Query: 282 HDEMRHRGFLP 292
E+ HR P
Sbjct: 375 M-ELVHRRVPP 384
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 85/216 (39%), Gaps = 43/216 (19%)
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL- 234
+ A ++ G+ D VS+N I FC+ G L+ A E + G+ PD VTY+ LI AL
Sbjct: 164 LHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALY 223
Query: 235 ---------------CLQGSLP-------------------EAFDLFLEMLRGDVSPSNS 260
L+G P +A DL L M + V P +
Sbjct: 224 KHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSI 283
Query: 261 TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDE 320
TY ++ + L MA ++ M +G + P+L + +IH LC D
Sbjct: 284 TYNMVIKGFFLARFPDMAERVYTAMHGKG--------YKPNLKIYQTMIHYLCKAGNFDL 335
Query: 321 ALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKA 356
A + + P+ + +L G + +L +A
Sbjct: 336 AYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQA 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P L +F I+ L + R +A +++ M + + PD TYN +I G R A
Sbjct: 244 KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAER 303
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+Y M +G PN + Y ++I LC D AY + + + + P++ T + +
Sbjct: 304 VYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLV 363
Query: 166 SSERVEQALGIFSAMAER 183
+++QA I + R
Sbjct: 364 KKGQLDQAKSIMELVHRR 381
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 128/605 (21%), Positives = 245/605 (40%), Gaps = 77/605 (12%)
Query: 35 KKVGETFGLLRME----PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNA 90
++V + F ++++ P +V + V++ + +++ A+E EM G PD
Sbjct: 169 RQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGT 228
Query: 91 LICGMCKVRNMLCAVELYDQMRVRGLSPNERTY-MSLIDLLCTWWLDKAYKVFNEMIASG 149
++C + + Y ++ R + + Y L L + K ++ EM+ G
Sbjct: 229 MLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEG 288
Query: 150 FLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKAL 209
P+ TY +++Y E+AL F M G P+ V+Y++VIS + G+ EKA+
Sbjct: 289 VPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAI 348
Query: 210 EIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAY 269
+ + +GI+P + T + ++ + P+A LF +M R + ++ Y
Sbjct: 349 GLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIY 408
Query: 270 CLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNA---------------------- 307
+G F A + +E L D + S V N+
Sbjct: 409 GKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSR 468
Query: 308 -----LIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR--ELKKAYELK 360
++ ++ VD A R + + GL PDA S N +L + ++ E K + +
Sbjct: 469 FAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQ 527
Query: 361 VEMDEKIIWLDEYTYESLM-----EGLSDEVT--------YSSLLNDYFAQG---NMQKV 404
+ +D+ + D Y++ M EG+ E + + ++ F Q +M V
Sbjct: 528 IMVDQ--VHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIV 585
Query: 405 FKLER-EMTRNGYLPDSVTLGVFINGLNKKATTSIAKGIL-------------LRMISS- 449
K ++ E N D + LG+ +N K+ + K IL R+ISS
Sbjct: 586 NKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSF 645
Query: 450 --QCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMH---NMSVK 504
+ + +I D +I +E ++ L+ + + + EA +R++ S
Sbjct: 646 VREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEA----KRLYLAAGESKT 701
Query: 505 PDGAVYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWV 564
P +V +I + R G + AY ++ E G P ++ L++AL K+ E +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 565 IRNTL 569
R L
Sbjct: 762 SRTCL 766
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 3/199 (1%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
+P V+ ++ L + + EA+ + R K + D YN LI M + + CA E
Sbjct: 736 DPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASE 795
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+Y++M G+ + +TY ++I + LDKA ++F+ SG Y I Y
Sbjct: 796 IYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYG 855
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEK-GILPDD 224
++ +AL +FS M ++G+ P SYN ++ K C L ++ + +E+ G D
Sbjct: 856 KGGKMSEALSLFSEMQKKGIKPGTPSYNMMV-KICATSRLHHEVDELLQAMERNGRCTDL 914
Query: 225 VTYSALIQALCLQGSLPEA 243
TY LIQ EA
Sbjct: 915 STYLTLIQVYAESSQFAEA 933
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 105/236 (44%), Gaps = 1/236 (0%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
V + +IK + E +++ A E+ M+ G+ +TYN +I + + A+E++
Sbjct: 775 VGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSN 834
Query: 111 MRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
R GL +E+ Y ++I + +A +F+EM G P +YN + +S
Sbjct: 835 ARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRL 894
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
+ + AM G DL +Y +I + + + +A + EKGI +S+
Sbjct: 895 HHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSS 954
Query: 230 LIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
L+ AL G + EA + +M +SP ++ ++ Y G+ +++M
Sbjct: 955 LLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 19/258 (7%)
Query: 117 SPNERTYMSLID--LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQAL 174
+P + S+ID + C W L+ AY +F E G P T + + A + + +A
Sbjct: 701 TPGKSVIRSMIDAYVRCGW-LEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAE 759
Query: 175 GIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQAL 234
I E+ + D V YN +I + G+L+ A EI G+ TY+ +I
Sbjct: 760 HISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
Query: 235 CLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDF 294
L +A ++F R + YT ++ Y G+ S A L EM+ +G P
Sbjct: 820 GRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPG- 878
Query: 295 VIQFSPSLVTFNALIHGLCSLER----VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
+PS +N ++ +C+ R VDE +L+ M G D +Y T++ + +
Sbjct: 879 ----TPS---YNMMVK-ICATSRLHHEVDE---LLQAMERNGRCTDLSTYLTLIQVYAES 927
Query: 351 RELKKAYELKVEMDEKII 368
+ +A + + EK I
Sbjct: 928 SQFAEAEKTITLVKEKGI 945
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 27/285 (9%)
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYK-- 140
P+ +N + G + + A++LY M GL PN T+ ++ KA+K
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK---SKAFKEG 153
Query: 141 --VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISK 198
+ ++ G + + I+ Y+ + R+E A +F R D+VSY A+I
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKG 209
Query: 199 FCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPS 258
+ G +E A ++ E K D V+++A+I G+ EA +LF +M++ +V P
Sbjct: 210 YASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 259 NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERV 318
ST ++ A G + +H + G F +L NALI +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHG--------FGSNLKIVNALIDLYSKCGEL 317
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
+ A G+ +P D +S+NT++ G+ + K+A L EM
Sbjct: 318 ETACGLFERLP----YKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/409 (19%), Positives = 162/409 (39%), Gaps = 46/409 (11%)
Query: 80 GLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDL-LCTWWLDKA 138
GL P+ T+ ++ K + +++ + G + + SLI + + L+ A
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 139 YKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISK 198
+KVF++ V +Y I Y S +E A +F + + D+VS+NA+IS
Sbjct: 189 HKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISG 240
Query: 199 FCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPS 258
+ + G ++ALE+ + ++ + PD+ T ++ A GS+ + L + +
Sbjct: 241 YAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSN 300
Query: 259 NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERV 318
L+ Y GE A L + + ++ ++++N LI G +
Sbjct: 301 LKIVNALIDLYSKCGELETACGLFERLPYK------------DVISWNTLIGGYTHMNLY 348
Query: 319 DEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESL 378
EAL + + M G +P+ V+ ++L + + + V +D+++ + + SL
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS--SL 406
Query: 379 MEGLSDEV----------------------TYSSLLNDYFAQGNMQKVFKLEREMTRNGY 416
L D ++++++ + G F L M + G
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 417 LPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIE 465
PD +T ++ + + + I M +T P Y +I+
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT-PKLEHYGCMID 514
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/453 (17%), Positives = 170/453 (37%), Gaps = 107/453 (23%)
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
E + A+ +F + E P+L+ +N + + AL++ + G+LP+ T+
Sbjct: 82 EGLPYAISVFKTIQE----PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
++++ + E + +L+ +T L+ Y G A + D+ H
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
R +V++ ALI G S ++ A + +P D VS+N ++ G+
Sbjct: 198 R------------DVVSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNAMISGY 241
Query: 348 CQIRELKKAYEL---------------------------KVEMDEKI-IWLDEYTYES-- 377
+ K+A EL +E+ ++ +W+D++ + S
Sbjct: 242 AETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNL 301
Query: 378 ---------------------LMEGL--SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
L E L D +++++L+ Y ++ L +EM R+
Sbjct: 302 KIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 361
Query: 415 GYLPDSVTL-------------------GVFINGLNKKATTSIAKGILLRMISSQCLTM- 454
G P+ VT+ V+I+ K T + + L + ++C +
Sbjct: 362 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 455 PSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLI 514
++ ++++++ S ++ F+ G + + RM + ++PD + L+
Sbjct: 422 AAHQVFNSILHK----SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 515 FDHCRRG----------NVNKAYEMYKEMVHYG 537
G + + Y+M ++ HYG
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYG 510
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 4/155 (2%)
Query: 140 KVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKF 199
++F++M GF K A R +AL +FS + ++ PD+V++ A++ +
Sbjct: 186 EIFHKMRTEGFTNEAV---KMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 200 CQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSL-PEAFDLFLEMLRGDVSPS 258
G+ ++ L++ + G+ P+ TYS LI+ L G +A LEM+ +SP+
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPN 302
Query: 259 NSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPD 293
+TYT + A+ G+ A L EM+ +GF+PD
Sbjct: 303 AATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEMIASGFLPSVATYNKFITAY 164
E++ +MR G + NE M D L +A ++F+++ +P V + + AY
Sbjct: 186 EIFHKMRTEGFT-NEAVKM--FDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAY 242
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEK-ALEIKAETVEKGILPD 223
++ + ++ L +F M G+SP+ +Y+ +I DG+ K A + E + G+ P+
Sbjct: 243 ANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPN 302
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEM 250
TY+A+ +A +G A +L EM
Sbjct: 303 AATYTAVFEAFVREGKEESARELLQEM 329
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 10/161 (6%)
Query: 176 IFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALC 235
IF M G + + V +SK DG +ALE+ ++ +K +PD V ++A+++A
Sbjct: 187 IFHKMRTEGFTNEAVKMFDALSK---DGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYA 243
Query: 236 LQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFV 295
G E +F+ ML VSP+ TY+ L+ G+ H + + + L
Sbjct: 244 NAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGK------THKDAK-KYLLEMMG 296
Query: 296 IQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPD 336
SP+ T+ A+ + + A +L+ M G PD
Sbjct: 297 NGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 104 AVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFIT 162
A+EL+ Q++ + P+ + ++++ K KVF M+ASG P+ TY+ I
Sbjct: 216 ALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIK 275
Query: 163 AYLSSERVEQ-ALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGIL 221
+ + + A M G+SP+ +Y AV F ++G+ E A E+ E KG +
Sbjct: 276 GLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFV 335
Query: 222 PDD 224
PD+
Sbjct: 336 PDE 338
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 2/156 (1%)
Query: 35 KKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICG 94
K + E F +R E + + L + R EA E+ ++ K PD + A++
Sbjct: 182 KNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEA 241
Query: 95 MCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCT--WWLDKAYKVFNEMIASGFLP 152
++++ +M G+SPN TY LI L A K EM+ +G P
Sbjct: 242 YANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSP 301
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
+ ATY A++ + E A + M +G PD
Sbjct: 302 NAATYTAVFEAFVREGKEESARELLQEMKGKGFVPD 337
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 167/401 (41%), Gaps = 45/401 (11%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP + S+ ++K + ++ A+++ E+ + PD +YN LI G R A+
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLISGYADARETFAAMV 126
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
L+ +MR G + T LI C +D ++ ++ GF + N F+T Y
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCD-RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+ +A+ +F M E D VS+N++I + Q E KAL + E + KG D T
Sbjct: 186 GGLLREAVSVFYGMDEL---RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
++++ AL L ++++ ++ + L+ Y G D M
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGC-------DGM- 294
Query: 287 HRGFLPDFVIQ--FSPSLVTFNALIHGLCSLERV-DEALGILRGMPEMGLSPDAVSYNTV 343
+ + V Q SP LV +N +I G E + +EA+ R M +G PD S+ V
Sbjct: 295 ---YDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCV 351
Query: 344 LFGFCQIRELKKAYEL------------KVEMDEKIIWL---------DEYTYESLMEGL 382
+ + ++ ++ ++ +I L + ++ + E
Sbjct: 352 TSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE-- 409
Query: 383 SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
+ V+++ ++ Y G+ + L + M +G P+ +T
Sbjct: 410 LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITF 450
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 24/252 (9%)
Query: 66 MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC-AVELYDQMRVRGLSPNERTYM 124
M ++++V +E+ L+PD +N +I G + AV+ + QM+ G P++ +++
Sbjct: 294 MYDSEKVFQEI----LSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFV 349
Query: 125 SLIDLLCTWWLDKAYKVFNEMIASGFLPS--VATYNKFITAYLSSERVEQALGIFSAMAE 182
+ K + + +PS ++ N I+ Y S ++ A +F M E
Sbjct: 350 CVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE 409
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE 242
+ VS+N +I + Q G +AL + ++ GI P+ +T+ A++ A G + E
Sbjct: 410 L----NAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDE 465
Query: 243 AFDLFLEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
+ F M + P Y+ C++ A L + R +P + P
Sbjct: 466 GQEYFNTMKETFKIEPEAEHYS------CMIDLLGRAGKLEEAERFIDAMP-----YKPG 514
Query: 302 LVTFNALIHGLC 313
V + AL+ G C
Sbjct: 515 SVAWAALL-GAC 525
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 154/388 (39%), Gaps = 55/388 (14%)
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK---AYKVFN 143
++N++I + + A+ LY +M +G + T S+++ L + LD +
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS--LDHLIGGRQFHG 264
Query: 144 EMIASGFLPSVATYNKFITAY---------LSSERVEQALGIFSAMAERGLSPDLVSYNA 194
++I +GF + + I Y SE+V Q + LSPDLV +N
Sbjct: 265 KLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI----------LSPDLVVWNT 314
Query: 195 VISKFCQDGEL-EKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+IS + + EL E+A++ + G PDD ++ + A C S P +
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSA-CSNLSSPSQCKQIHGLAIK 373
Query: 254 DVSPSN--STYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHG 311
PSN S L+ Y G A + D M P+ + V+FN +I G
Sbjct: 374 SHIPSNRISVNNALISLYYKSGNLQDARWVFDRM------PEL------NAVSFNCMIKG 421
Query: 312 LCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLD 371
EAL + + M + G++P+ +++ VL ++ + E M E
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE------ 475
Query: 372 EYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLN 431
T++ + E + S + D G K+ + ER + Y P SV +
Sbjct: 476 --TFK-----IEPEAEHYSCMIDLL--GRAGKLEEAERFIDAMPYKPGSVAWAALLGACR 526
Query: 432 KKATTSIAKGILLRMISSQCLTMPSYII 459
K ++A+ ++ Q L Y++
Sbjct: 527 KHKNMALAERAANELMVMQPLAATPYVM 554
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 14/273 (5%)
Query: 18 NVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMN 77
+++IR FA + EK E G ++ + K V+ + E ME EVV M
Sbjct: 287 SMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGN-METTLEVVAAMR 345
Query: 78 RKGL-APDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WL 135
+ L DC A++ G K R AV++Y+ + TY I+ C
Sbjct: 346 KAELKVTDC-ILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKY 404
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
+KA +F+EM+ GF V Y+ + Y + R+ A+ + + M +RG P++ YN++
Sbjct: 405 NKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSL 464
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLE--MLRG 253
I + +L +A +I E +LPD V+Y+++I A L +L+ E M RG
Sbjct: 465 IDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRG 524
Query: 254 DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+ R M A +VG FS + + MR
Sbjct: 525 KID-------RAM-AGIMVGVFSKTSRIDELMR 549
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 148/358 (41%), Gaps = 26/358 (7%)
Query: 80 GLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLD--- 136
G+ P Y ++ K+ VEL+ + + + LS + S+ ++C+
Sbjct: 204 GVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGR 263
Query: 137 --KAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNA 194
+A +V EM G S Y+ I A+ + V +F + L D
Sbjct: 264 AFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLK 323
Query: 195 VISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGD 254
V+ + ++G +E LE+ A + + D A++ Q EA ++ ++ +
Sbjct: 324 VVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEE 383
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
TY + AYC + +++ A L DEM +G F +V ++ ++
Sbjct: 384 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG--------FDKCVVAYSNIMDMYGK 435
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
R+ +A+ ++ M + G P+ YN+++ + +L++A ++ EM +
Sbjct: 436 TRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKV------ 489
Query: 375 YESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNK 432
L D+V+Y+S+++ Y +++ +L +E N D G+ + +K
Sbjct: 490 -------LPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSK 540
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 144/391 (36%), Gaps = 67/391 (17%)
Query: 255 VSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCS 314
V PS Y R+M A+ +GE L E + + F+ + S S+ T + L
Sbjct: 205 VEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRL--SFLAKESGSIYTI--VCSSLAK 260
Query: 315 LERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYT 374
R EAL +L M + G+ + Y+ ++ F + RE+
Sbjct: 261 SGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREV--------------------- 299
Query: 375 YESLMEGLSDEVTYSSLLND----------YFAQGNMQKVFKLEREMTRNGYLPDSVTLG 424
+ E L E LL D Y +GNM+ ++ M + L
Sbjct: 300 --VITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILC 357
Query: 425 VFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN-CSYVEFKSAVGLVKDFS 483
+NG +K+ + A + + +C + Y I C ++ A L +
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEA--GQVTYAIAINAYCRLEKYNKAEMLFDEMV 415
Query: 484 TRGL-------------------VNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVN 524
+G +++A +M KP+ +YN LI H R ++
Sbjct: 416 KKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLR 475
Query: 525 KAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTLRSCNLNDSELHQVLN 584
+A +++KEM P S S+I A Y K E + R +N ++ + +
Sbjct: 476 RAEKIWKEMKRAKVLPDKVSYTSMISA-YNRSKELERCVELYQEFR---MNRGKIDRAMA 531
Query: 585 EIEV----KKCKIDALLNALAKIAVDGMLLD 611
I V K +ID L+ L + V+G LD
Sbjct: 532 GIMVGVFSKTSRIDELMRLLQDMKVEGTRLD 562
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 14/231 (6%)
Query: 22 RGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGL 81
RGFA E+V KV E E V++ I C E+ +A+ + EM +KG
Sbjct: 367 RGFA-EAV------KVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGF 419
Query: 82 APDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYK 140
Y+ ++ K R + AV L +M+ RG PN Y SLID+ L +A K
Sbjct: 420 DKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEK 479
Query: 141 VFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFC 200
++ EM + LP +Y I+AY S+ +E+ + ++ D ++ F
Sbjct: 480 IWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFS 539
Query: 201 QDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQG------SLPEAFD 245
+ +++ + + + +G D YS+ + AL G L E+FD
Sbjct: 540 KTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFD 590
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 126/321 (39%), Gaps = 48/321 (14%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMN-RKGLAPDCETYNAL--ICGMCKVRNMLCAVEL 107
+ F V++ + +EEA V+ M+ +K + PD + + I C +++ L L
Sbjct: 594 IGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKL--QHL 651
Query: 108 YDQMRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVAT---------- 156
Y ++R G+ N+ Y +I+ LD+ F EMI GF P+ T
Sbjct: 652 YYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGK 711
Query: 157 ------------------------YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
YN I AY ++ M G S L +Y
Sbjct: 712 AKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAY 771
Query: 193 NAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLR 252
N ++ + +D ++EK I + PD TY+ +I QG + E D+ E+
Sbjct: 772 NTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKE 831
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
+ P +Y L+ AY + G A L EMR R +PD VT+ L+ L
Sbjct: 832 SGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD--------KVTYTNLVTAL 883
Query: 313 CSLERVDEALGILRGMPEMGL 333
+ EA+ M +MG+
Sbjct: 884 RRNDEFLEAIKWSLWMKQMGI 904
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 115/594 (19%), Positives = 222/594 (37%), Gaps = 115/594 (19%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++++ +I + +ME A+ + + GL PD +Y ++I G + N A
Sbjct: 347 PNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHY 406
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASG----------------- 149
Y +++ G PN +LI+L + D A K +M G
Sbjct: 407 YQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKV 466
Query: 150 ----FLPSV-------------ATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSY 192
+P V +++ + AY+ V+ LG+ R + + Y
Sbjct: 467 GKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLY 526
Query: 193 NAVISKFCQDGELEKALEI---KAETVEK------------------------------- 218
+ +I + G+L A++I K E+ E+
Sbjct: 527 HLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKS 586
Query: 219 -GILPDDVTYSALIQALCLQGSLPEAFDLFLEML--RGDVSPSNSTYTRLMYAYCLVGEF 275
G++ D + +S +++ GSL EA + LE++ + D+ P + ++ Y
Sbjct: 587 SGVVLDRIGFSIVVRMYVKAGSLEEACSV-LEIMDEQKDIVPDVYLFRDMLRIYQKCDLQ 645
Query: 276 SMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSP 335
HL+ +R G I ++ + +N +I+ +DE G M G +P
Sbjct: 646 DKLQHLYYRIRKSG------IHWNQEM--YNCVINCCARALPLDELSGTFEEMIRYGFTP 697
Query: 336 DAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDY 395
+ V++N +L + + + KK EL + G+ D ++Y++++ Y
Sbjct: 698 NTVTFNVLLDVYGKAKLFKKVNELFLLAKR--------------HGVVDVISYNTIIAAY 743
Query: 396 FAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMP 455
+ + + M +G+ ++ K + IL RM S + P
Sbjct: 744 GKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST--SGP 801
Query: 456 SYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIF 515
+ Y+ +I + +G ++E A + + + PD YN LI
Sbjct: 802 DHYTYNIMI---------------NIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIK 846
Query: 516 DHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLIHALYYDRKNSEMGWVIRNTL 569
+ G V +A + KEM P + +L+ AL R+N E I+ +L
Sbjct: 847 AYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTAL---RRNDEFLEAIKWSL 897
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 199/496 (40%), Gaps = 66/496 (13%)
Query: 66 MEEAKEVVREMNRKGLAPDCET-YNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
+EEA+ M + G+ CE+ Y+++I ++R A E+ D M+ + ++
Sbjct: 261 VEEAEFAFSHMRKFGIV--CESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWL 318
Query: 125 SLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
+++ ++ A + M A+GF P++ YN IT Y ++E A G+F +
Sbjct: 319 VMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNI 378
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEA 243
GL PD SY ++I + + E+A E G P+ LI G A
Sbjct: 379 GLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGA 438
Query: 244 FDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSM-------AFHLHDEMRHRGFLPDFVI 296
+E + G +S ++ AY VG+ + +FH H + F
Sbjct: 439 IKT-IEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSF------ 491
Query: 297 QFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC----QIRE 352
S + + HG+ VD+ LG+LR + ++ Y+ +L C Q+ +
Sbjct: 492 ----SSLVMAYVKHGM-----VDDCLGLLREKKWRDSAFESHLYH-LLICSCKESGQLTD 541
Query: 353 LKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMT 412
K Y K+E DE+I + +T S++++ Y G + KL +
Sbjct: 542 AVKIYNHKMESDEEI---------------NLHIT-STMIDIYTVMGEFSEAEKLYLNLK 585
Query: 413 RNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIENCSYVEF 472
+G + D + + + K + A +L M + + Y+ D L
Sbjct: 586 SSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDML--------- 636
Query: 473 KSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKAYEMYKE 532
+ + L ++ + R+ + + +YN +I R +++ ++E
Sbjct: 637 -------RIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEE 689
Query: 533 MVHYGFFPH--MFSVL 546
M+ YGF P+ F+VL
Sbjct: 690 MIRYGFTPNTVTFNVL 705
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 147/363 (40%), Gaps = 50/363 (13%)
Query: 27 ESVMSCKEKKVGETFGLLRME----PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLA 82
E + + + + + F LLR + P + + +I L + ++ E+A E+ +EM +G
Sbjct: 123 ERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCV 182
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMR-VRGLSPNERTYMSLI-DLLCTWWLDKAYK 140
+ E Y AL+ + A L ++M+ P+ TY LI L + DK
Sbjct: 183 VNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQD 242
Query: 141 VFNEMIASGFLPSVATYNKFITAYLSSER-VEQALGIFSAMAERGLSPDLVSYNAVISKF 199
+ ++M G P+ TYN I AY ++ VE + + E PD + N+ + F
Sbjct: 243 LLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
Query: 200 CQDGELEKALEIKAETVEKGILPD-----------------------------------D 224
+G++E + GI P+
Sbjct: 303 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 225 VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
VTY+ +I A G L + LF M + PS T L+ AY G S A +
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY---GRASKADKIGGV 419
Query: 285 MRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVL 344
+R F+ + I+ LV FN L+ +E+ E G+L M + G PD ++Y T++
Sbjct: 420 LR---FIENSDIRL--DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMV 474
Query: 345 FGF 347
+
Sbjct: 475 KAY 477
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 15/270 (5%)
Query: 104 AVELYDQMRVR-GLSPNERTYMSLIDLL--CTWWLDKAYKVFNEMIASGFLPSVATYNKF 160
A+++++ +R + PN Y+ LI +L C +KA+++F EMI G + + Y
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQ-PEKAHELFQEMINEGCVVNHEVYTAL 191
Query: 161 ITAYLSSERVEQALGIFSAM-AERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG 219
++AY S R + A + M + PD+ +Y+ +I F Q +K ++ ++ +G
Sbjct: 192 VSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQG 251
Query: 220 ILPDDVTYSALIQALCLQGSLPEAFDLFLEML-RGDVSPSNSTYTRLMYAYCLVGEFSMA 278
I P+ +TY+ LI A E ++ML D P + T + A+ G+ M
Sbjct: 252 IRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMM 311
Query: 279 FHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAV 338
+ +++ + G P++ TFN L+ + ++ M + S V
Sbjct: 312 ENCYEKFQSSG--------IEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIV 363
Query: 339 SYNTVLFGFCQIRELKK-AYELKVEMDEKI 367
+YN V+ F + +LK+ Y ++ E+I
Sbjct: 364 TYNVVIDAFGRAGDLKQMEYLFRLMQSERI 393
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 157/376 (41%), Gaps = 52/376 (13%)
Query: 165 LSSERVEQALGIFSAMAER-GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
+++ R E A+ +F + E+ P++ Y +I + + EKA E+ E + +G + +
Sbjct: 125 ITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVN 184
Query: 224 DVTYSALIQALCLQGSLPEAFDLFLEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
Y+AL+ A G AF L M + P TY+ L+ ++ V F L
Sbjct: 185 HEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLL 244
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER-VDEALGILRGMPEMGLSPDAVSYN 341
+MR +G P+ +T+N LI + V+ +++ + E PD+ + N
Sbjct: 245 SDMRRQGIRPN--------TITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMN 296
Query: 342 TVLFGFC---QIRELKKAYE------LKVEMDEKIIWLDEY-------TYESLMEGLSDE 385
+ L F QI ++ YE ++ + I LD Y ++ME +
Sbjct: 297 STLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKY 356
Query: 386 ------VTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIA 439
VTY+ +++ + G+++++ L R M P VTL + +A+ +
Sbjct: 357 HYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYG-RASKADK 415
Query: 440 KGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFST-RGLVNEAAIAHERM 498
G +LR I + S I D + NC A G ++ F+ +G++ E M
Sbjct: 416 IGGVLRFIEN------SDIRLDLVFFNC----LVDAYGRMEKFAEMKGVL-------ELM 458
Query: 499 HNMSVKPDGAVYNLLI 514
KPD Y ++
Sbjct: 459 EKKGFKPDKITYRTMV 474
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 128/308 (41%), Gaps = 10/308 (3%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
V++ ++ L + E VV EM G D +TY + K R M V+LY+
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEY 323
Query: 111 MRVRGLSPNERTYMSLIDLLC---TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSS 167
M P+ + L+ L LD ++V + ++G S A Y+ + S
Sbjct: 324 MMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSV 383
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
R ++A I AM G PD ++Y+ ++ C+ LE+A + + +G PD T+
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+ LIQ C L +A F ML ++ L+ + + +F A EM
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVK 503
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
P T+ LI L +++ +EAL +L+ M + A +++ L F
Sbjct: 504 NA-------NVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKF 556
Query: 348 CQIRELKK 355
+ + KK
Sbjct: 557 GTLEDAKK 564
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 14/234 (5%)
Query: 153 SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIK 212
S TYN + V + + M G DL +Y V +F + + + +++
Sbjct: 262 STVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLY 321
Query: 213 AETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG----DVSPSNSTYTRLMYA 268
++ P S L++ L GS DL + R S S + Y + +
Sbjct: 322 EYMMDGPFKPSIQDCSLLLR--YLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRS 379
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
VG F A + MR+ G+ PD + T++ L+ GLC +R++EA G+L M
Sbjct: 380 LTSVGRFDEAEEITKAMRNAGYEPDNI--------TYSQLVFGLCKAKRLEEARGVLDQM 431
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL 382
G PD ++ ++ G C+ EL KA M EK +D + L++G
Sbjct: 432 EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 6/204 (2%)
Query: 47 EPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVE 106
EP +++ ++ LC+ +R+EEA+ V+ +M +G PD +T+ LI G CK + A+
Sbjct: 402 EPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALA 461
Query: 107 LYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVF-NEMIASGFL-PSVATYNKFITAY 164
+ M +G + LID + +F EM+ + + P +TY I
Sbjct: 462 CFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKL 521
Query: 165 LSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDD 224
L ++ E+AL + M ++ +++ ++KF G LE A + + + P
Sbjct: 522 LKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKF---GTLEDAKKF-LDVLSSKDSPSF 577
Query: 225 VTYSALIQALCLQGSLPEAFDLFL 248
Y +I+A +G L +A +L
Sbjct: 578 AAYFHVIEAFYREGRLTDAKNLLF 601
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 93/243 (38%), Gaps = 33/243 (13%)
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
V R+ G + Y+ + + V A E+ MR G P+ TY L+ LC
Sbjct: 357 VSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLC 416
Query: 132 -TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
L++A V ++M A G P + T+ I + + +++AL F+ M E+G D
Sbjct: 417 KAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSN 476
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKG-ILPDDVTYSALIQALCLQGSLPEAFDL--- 246
+ +I F + E A E V+ + P TY LI L EA DL
Sbjct: 477 LLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQM 536
Query: 247 ----------------------------FLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMA 278
FL++L SPS + Y ++ A+ G + A
Sbjct: 537 MKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDA 596
Query: 279 FHL 281
+L
Sbjct: 597 KNL 599
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 19/252 (7%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCET----YNALICGMCKVRNMLC-AVE 106
++ +IK+ +R + ++ E+ +A CE YN +I C + + A +
Sbjct: 110 AYHTMIKQAITGKRNNFVETLIEEV----IAGACEMSVPLYNCIIRFCCGRKFLFNRAFD 165
Query: 107 LYDQM-RVRGLSPNERTYMSLIDL---------LCTWWLDKAYKVFNEMIASGFLPSVAT 156
+Y++M R P+ TY L+ +C +L + +M ++G +P
Sbjct: 166 VYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFV 225
Query: 157 YNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
N I AY V++A+ +F MA G P+ +Y+ ++ C+ G + + L E
Sbjct: 226 LNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQ 285
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
KG++P+ Y LI +L ++ L EA ++ +ML +SP TY ++ C G S
Sbjct: 286 VKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGS 345
Query: 277 MAFHLHDEMRHR 288
A + +E + R
Sbjct: 346 EALEMVEEWKKR 357
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 9/193 (4%)
Query: 83 PDCETYNALICGMCKVRNML--CAVELY------DQMRVRGLSPNERTYMSLIDLLCTWW 134
PD ETY L+ + K N L C V L+ QM+ G+ P+ +I
Sbjct: 178 PDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCL 237
Query: 135 -LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
+D+A +VF EM G P+ TY+ + RV Q LG + M +G+ P+ Y
Sbjct: 238 EVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYM 297
Query: 194 AVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRG 253
+I + L++A+E+ + + + PD +TY+ ++ LC G EA ++ E +
Sbjct: 298 VLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Query: 254 DVSPSNSTYTRLM 266
D Y LM
Sbjct: 358 DPVMGERNYRTLM 370
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 115/278 (41%), Gaps = 19/278 (6%)
Query: 114 RGLSPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSERV-E 171
RG N Y ++I T + + E+IA SV YN I + +
Sbjct: 102 RGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFN 161
Query: 172 QALGIFSAMAERGLS-PDLVSYNAVISKFCQDGE--------LEKALEIKAETVEKGILP 222
+A +++ M S PDL +Y ++S + L + + G++P
Sbjct: 162 RAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIP 221
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
D + +I+A + EA +F EM P+ TY+ L+ C G +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
EM+ +G +P+ + LI L R+DEA+ ++ M LSPD ++YNT
Sbjct: 282 KEMQVKGMVPNGSC--------YMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNT 333
Query: 343 VLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLME 380
VL C+ +A E+ E ++ + E Y +LM+
Sbjct: 334 VLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 17 MNVMIRGFATESVMSCKEK-KVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVRE 75
+N++I+ +A + E +V + L EP ++ ++K +CEK R+ + +E
Sbjct: 226 LNMIIKAYA--KCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKE 283
Query: 76 MNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLC 131
M KG+ P+ Y LIC + R + AVE+ M LSP+ TY +++ LC
Sbjct: 284 MQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELC 339
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 111/251 (44%), Gaps = 34/251 (13%)
Query: 46 MEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAV 105
++P +S ++K C ++E AKEV + +++ G+ E Y + K + A
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFAC 664
Query: 106 ELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYL 165
+Y M+ + ++P+E + +LID VA + K +
Sbjct: 665 SIYKDMKEKDVTPDEVFFSALID-------------------------VAGHAKML---- 695
Query: 166 SSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDV 225
++A GI +G+ +SY++++ C + +KALE+ + + P
Sbjct: 696 -----DEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTIS 750
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
T +ALI ALC LP+A + E+ + P+ TY+ LM A +F ++F L +
Sbjct: 751 TMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQA 810
Query: 286 RHRGFLPDFVI 296
+ G P+ ++
Sbjct: 811 KGDGVSPNLIM 821
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 149/351 (42%), Gaps = 77/351 (21%)
Query: 77 NRKGLAPDC-ETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWW- 134
N G +P+ + YN L+ ++++ + +E DQ R L ++ Y + C
Sbjct: 395 NSNGRSPETSDAYNRLLRD-GRIKDCISLLEDLDQ---RDLLDMDKIYHASFFKACKKQR 450
Query: 135 -LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYN 193
+ +A++ F ++I + P+++T+N ++ SS+ +E A G+ + E G++ D Y
Sbjct: 451 AVKEAFR-FTKLILN---PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYT 506
Query: 194 AVISKFCQDGELEKALEI------------------------KAETVEK-----GIL--- 221
+IS + G+++ E+ +A V K GIL
Sbjct: 507 TLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK 566
Query: 222 ---PDDVTYSALIQALCLQGSLPEAFDLFLEML--RGDVSPSNSTYTRLMYAYCLVGEFS 276
PD V ++ALI A G++ AFD+ EM + P + + LM A C G+
Sbjct: 567 NVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVE 626
Query: 277 MAFHLHDEMRH----RGFLPDFVI------------------------QFSPSLVTFNAL 308
A ++ +M H RG + I +P V F+AL
Sbjct: 627 RAKEVY-QMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSAL 685
Query: 309 IHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYEL 359
I + +DEA GIL+ G+ +SY++++ C ++ KKA EL
Sbjct: 686 IDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALEL 736
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P V F +I + ++EA ++++ +G+ +Y++L+ C ++ A+EL
Sbjct: 677 PDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALEL 736
Query: 108 YDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
Y++++ L P T +LI LC L KA + +E+ G P+ TY+ + A
Sbjct: 737 YEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASER 796
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVIS-------KFCQDGE--------------- 204
+ E + + S G+SP+L+ + S K C GE
Sbjct: 797 KDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKRRFEKACAGGEPVVSFKSGRPQIENK 856
Query: 205 -LEKALEIKAETVEKGILPDDVTYSALIQAL-CLQ 237
AL + ET+ G +P T + Q L CLQ
Sbjct: 857 WTSMALMVYRETISGGTVP---TTEVVSQVLGCLQ 888
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/346 (20%), Positives = 153/346 (44%), Gaps = 40/346 (11%)
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
+ +R G + ++ A+I G + AV+L+ +M+ +G+ PNE TY ++ L
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTAL 407
Query: 131 CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
+ +V +++ + + S + AY+ +VE+A +FS + ++ D+V
Sbjct: 408 P---VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK----DIV 460
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQA-LCLQGSLPEAFDLFLE 249
+++A+++ + Q GE E A+++ E + GI P++ T+S+++ S+ +
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGF 520
Query: 250 MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALI 309
++ + S + L+ Y G A + R + LV++N++I
Sbjct: 521 AIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK------------DLVSWNSMI 568
Query: 310 HGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQ----IRELKKAYELKVEMDE 365
G + +AL + + M + + D V++ V F C + E +K +++ V D
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGV-FAACTHAGLVEEGEKYFDIMVR-DC 626
Query: 366 KIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREM 411
KI E+ S +++ Y G ++K K+ M
Sbjct: 627 KIAPTKEHN--------------SCMVDLYSRAGQLEKAMKVIENM 658
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 161/363 (44%), Gaps = 32/363 (8%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
++EEA +V ++ K D ++A++ G + A++++ ++ G+ PNE T+
Sbjct: 443 KVEEAAKVFSGIDDK----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFS 498
Query: 125 SLIDLLCTW--WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAE 182
S++++ + + + I S S+ + +T Y +E A +F E
Sbjct: 499 SILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 183 RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE 242
+ DLVS+N++IS + Q G+ KAL++ E ++ + D VT+ + A G + E
Sbjct: 559 K----DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEE 614
Query: 243 AFDLFLEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPS 301
F M+R ++P+ + C+V +S A L M+ +P+ P+
Sbjct: 615 GEKYFDIMVRDCKIAPTKE------HNSCMVDLYSRAGQLEKAMKVIENMPN------PA 662
Query: 302 LVTFNALIHGLCSLERVDEALGILRGMPEMGLSP-DAVSYNTVLFGFCQIRELKKAYELK 360
T I C + + E LG L + + P D+ +Y + + + + ++ +++
Sbjct: 663 GSTIWRTILAACRVHKKTE-LGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVR 721
Query: 361 VEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTR---NGYL 417
M+E+ + E Y S +E TYS L D Q KLE TR GY
Sbjct: 722 KLMNERNV-KKEPGY-SWIE--VKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYE 777
Query: 418 PDS 420
PD+
Sbjct: 778 PDT 780
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 115/567 (20%), Positives = 205/567 (36%), Gaps = 122/567 (21%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLC----AVELYDQMRVRGLSPNE 120
R +EAK + ++R G+ DC +++++ KV LC +L+ Q G +
Sbjct: 73 RTQEAKRLFLNIHRLGMEMDCSIFSSVL----KVSATLCDELFGRQLHCQCIKFGFLDDV 128
Query: 121 RTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSA 179
SL+D KVF+EM +V T+ I+ Y + ++ L +F
Sbjct: 129 SVGTSLVDTYMKGSNFKDGRKVFDEMKER----NVVTWTTLISGYARNSMNDEVLTLFMR 184
Query: 180 MAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKG-------------------- 219
M G P+ ++ A + ++G + L++ V+ G
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 220 -----ILPDD------VTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
IL D VT++++I G EA +F M V S S++ ++
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL 304
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
+ E LH + GFL F ++ T + + C+ L LR
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFL------FDQNIRTALMVAYSKCT-----AMLDALRLF 353
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGL------ 382
E+G + VS+ ++ GF Q ++A +L EM K + +E+TY ++ L
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS 413
Query: 383 -------------------------------------------SDEVTYSSLLNDYFAQG 399
D V +S++L Y G
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 400 NMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKG-------ILLRMISSQCL 452
+ K+ E+T+ G P+ T +N + S+ +G I R+ SS C+
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILN-VCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 453 TMPSYIIYDTL--IENCSYV-------EFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSV 503
+ +Y IE+ V + S ++ ++ G +A + M V
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 504 KPDGAVYNLLIFDHCRRGNVNKAYEMY 530
K DG + + +F C + + E Y
Sbjct: 593 KMDGVTF-IGVFAACTHAGLVEEGEKY 618
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 148/359 (41%), Gaps = 32/359 (8%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPD-CETYNALICGMCKVRNMLCAVELYDQM 111
F G+ + + +R K V ++++R+ A T + + + L A+E++D +
Sbjct: 57 FPGITEPV--NQRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDML 114
Query: 112 RVRGL-SPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
R + P E TYM L+ LL + ++A K+F+EM+ G P+V Y + AY S
Sbjct: 115 REQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNL 174
Query: 170 VEQALGIFSAMAE-RGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS 228
++ A I M PD+ +Y+ ++ + + + E E+ I P+ VT +
Sbjct: 175 IDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQN 234
Query: 229 ALIQALCLQGSLPEAFDLFLEMLRGDV-SPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
++ G + + +ML P T ++ + +G+ M +++ R+
Sbjct: 235 IVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRN 294
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGF 347
G P TFN LI D+ ++ M ++ +YN ++ F
Sbjct: 295 FG--------IEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAF 346
Query: 348 CQIRELKKAYELKVEMDEKIIWLDEYTYESLM-EGL-SDEVTYSSLLNDYFAQGNMQKV 404
+ + K E T++ + EG+ +D T+ L+N Y G KV
Sbjct: 347 ADVGDAKNM---------------ELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKV 390
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 153/365 (41%), Gaps = 26/365 (7%)
Query: 39 ETFGLLRMEPYLVSFKGVIKELC----EKERMEEAKEVVREMNRKGLAPDCETYNALICG 94
E F +LR + + +G +L + + A+++ EM +GL P E Y AL+
Sbjct: 109 EVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAA 168
Query: 95 MCKVRNMLCAVELYDQMR-VRGLSPNERTYMSL----IDLLCTWWLDKAYKVFNEMIASG 149
+ + A + D+M+ P+ TY +L +D +D YK +E + +
Sbjct: 169 YTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLIT- 227
Query: 150 FLPSVATYNKFITAYLSSERVEQALGIFSAM-AERGLSPDLVSYNAVISKFCQDGELEKA 208
P+ T N ++ Y R +Q + S M PD+ + N ++S F G+++
Sbjct: 228 --PNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMM 285
Query: 209 LEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYA 268
+ GI P+ T++ LI + + + + M + + + STY ++ A
Sbjct: 286 ESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEA 345
Query: 269 YCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGM 328
+ VG+ D+MR G D TF LI+G + + + ++
Sbjct: 346 FADVGDAKNMELTFDQMRSEGMKAD--------TKTFCCLINGYANAGLFHKVISSVQLA 397
Query: 329 PEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM-----EGLS 383
+ + + YN V+ + +L + + + M E+ D T+E ++ EG++
Sbjct: 398 AKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMN 457
Query: 384 DEVTY 388
D++ Y
Sbjct: 458 DKIYY 462
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 211/509 (41%), Gaps = 54/509 (10%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
+S+ +I L + EA + EM + G+ P+ T+ L+ G + ++
Sbjct: 191 ISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSN 249
Query: 111 MRVRGLSPNERTYMSLIDLLCTWW-LDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
+ VRG+ N SL+D + ++ A +V N S V + ++ ++ + R
Sbjct: 250 IIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLN----SSGEQDVFLWTSVVSGFVRNLR 305
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSA 229
++A+G F M GL P+ +Y+A++S L+ +I ++T++ G +A
Sbjct: 306 AKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNA 365
Query: 230 LIQA-LCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR 288
L+ + S EA +F M VSP+ ++T L+ G F L EM R
Sbjct: 366 LVDMYMKCSASEVEASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
Query: 289 GFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFC 348
+ P++VT + ++ L V L I + + + V N+++ +
Sbjct: 422 --------EVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYA 473
Query: 349 QIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYS---SLLNDYFAQGNMQKVF 405
R++ A+ + M + D TY SL+ ++ + S++N + G
Sbjct: 474 SSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALSVINYMYGDG-----I 524
Query: 406 KLEREMTRNGYLPDSVTLGVFING-----LNKKATTSIAKGILLRMIS--SQCLTMPSYI 458
+++ +++ G++ S LG G + K+ S A +L ++ S+C ++
Sbjct: 525 RMD-QLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLED-- 581
Query: 459 IYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHC 518
+ E + + S GLV ++ G ++ A A E M +PD + L++ C
Sbjct: 582 -AKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTF-LILLSAC 639
Query: 519 RRGNVN-----------KAYEMYKEMVHY 536
G + K Y + ++ HY
Sbjct: 640 SNGRLTDLGLEYFQVMKKIYNIEPQVEHY 668
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/400 (20%), Positives = 161/400 (40%), Gaps = 60/400 (15%)
Query: 80 GLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDK-- 137
GL + + N L+ K + A +L+D+M + RT + ++ + +
Sbjct: 53 GLLENLDLCNNLLSLYLKTDGIWNARKLFDEM-------SHRTVFAWTVMISAFTKSQEF 105
Query: 138 --AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
A +F EM+ASG P+ T++ + + + + ++ + G + V +++
Sbjct: 106 ASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSL 165
Query: 196 ISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDV 255
+ + G+ ++A E+ + D ++++ +I +L EA + EM++ V
Sbjct: 166 SDLYSKCGQFKEACELFSSLQN----ADTISWTMMISSLVGARKWREALQFYSEMVKAGV 221
Query: 256 SPSNSTYTRLMYAYCLVG-EFSMAFHLHDEMRH-------RGFLPDFVIQFSP------- 300
P+ T+ +L+ A +G EF H + +R + L DF QFS
Sbjct: 222 PPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRV 281
Query: 301 -------SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIREL 353
+ + +++ G R EA+G M +GL P+ +Y+ +L +R L
Sbjct: 282 LNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSL 341
Query: 354 -----------KKAYELKVEMDEKIIWLDEYTYESLMEGLSDE----------VTYSSLL 392
K +E ++ ++ D Y S E + V++++L+
Sbjct: 342 DFGKQIHSQTIKVGFEDSTDVGNALV--DMYMKCSASEVEASRVFGAMVSPNVVSWTTLI 399
Query: 393 NDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNK 432
G +Q F L EM + P+ VTL + +K
Sbjct: 400 LGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 125/310 (40%), Gaps = 51/310 (16%)
Query: 31 SCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNA 90
S E + FG + + P +VS+ +I L + +++ ++ EM ++ + P+ T +
Sbjct: 374 SASEVEASRVFGAM-VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSG 432
Query: 91 LICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGF 150
++ K+R++ +E++ + R V EM+
Sbjct: 433 VLRACSKLRHVRRVLEIHAYLLRR-------------------------HVDGEMVVG-- 465
Query: 151 LPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALE 210
N + AY SS +V+ A + +M R D ++Y +++++F + G+ E AL
Sbjct: 466 -------NSLVDAYASSRKVDYAWNVIRSMKRR----DNITYTSLVTRFNELGKHEMALS 514
Query: 211 IKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYC 270
+ GI D ++ I A G+L L ++ S + S L+ Y
Sbjct: 515 VINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYS 574
Query: 271 LVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPE 330
G A + +E+ +P +V++N L+ GL S + AL M
Sbjct: 575 KCGSLEDAKKVFEEIA------------TPDVVSWNGLVSGLASNGFISSALSAFEEMRM 622
Query: 331 MGLSPDAVSY 340
PD+V++
Sbjct: 623 KETEPDSVTF 632
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 199/480 (41%), Gaps = 75/480 (15%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
VS+ ++ + +MEEA + + L ++N L+ G K + ++ A + +D
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWNCLLGGFVKKKKIVEARQFFDS 244
Query: 111 MRVRGLSPNERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSER 169
M VR + ++ ++I + +D+A ++F+E + V T+ ++ Y+ +
Sbjct: 245 MNVRDVV----SWNTIITGYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGYIQNRM 296
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILP--DDVTY 227
VE+A +F M ER + VS+NA+++ + Q +E A E+ ++P + T+
Sbjct: 297 VEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELF------DVMPCRNVSTW 346
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRH 287
+ +I G + EA +LF +M + D ++ ++ Y G A L +M
Sbjct: 347 NTMITGYAQCGKISEAKNLFDKMPKRDPV----SWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 288 RGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALG-ILRGMPEMGLSPDAVSYNTVLFG 346
G + FS +L T ++ +LE + G +++G E G N +L
Sbjct: 403 EGGRLNRS-SFSSALSTCADVV----ALELGKQLHGRLVKGGYETG----CFVGNALLLM 453
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFK 406
+C+ +++A +L EM K D V++++++ Y G + +
Sbjct: 454 YCKCGSIEEANDLFKEMAGK-----------------DIVSWNTMIAGYSRHGFGEVALR 496
Query: 407 LEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYIIYDTLIEN 466
M R G PD T+ ++ + + M + MP+ Y +
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGV-MPNSQHYACM--- 552
Query: 467 CSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNKA 526
V+ GL++D AH M NM +PD A++ L+ GN A
Sbjct: 553 ---VDLLGRAGLLED------------AHNLMKNMPFEPDAAIWGTLLGASRVHGNTELA 597
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 105/509 (20%), Positives = 206/509 (40%), Gaps = 77/509 (15%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
VS+ G+I E A+++ EM + L ++N +I G + RN+ A EL++
Sbjct: 96 VSYNGMISGYLRNGEFELARKLFDEMPERDLV----SWNVMIKGYVRNRNLGKARELFEI 151
Query: 111 MRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERV 170
M R + C +D A VF+ M + ++N ++AY+ + ++
Sbjct: 152 MPERDVCSWNTMLSGYAQNGC---VDDARSVFDRMPEK----NDVSWNALLSAYVQNSKM 204
Query: 171 EQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL 230
E+A +F + LVS+N ++ F + ++ +A + + + D V+++ +
Sbjct: 205 EEACMLFKSRENWA----LVSWNCLLGGFVKKKKIVEARQF----FDSMNVRDVVSWNTI 256
Query: 231 IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
I G + EA LF E DV T+T ++ Y A L D+M R
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDV----FTWTAMVSGYIQNRMVEEARELFDKMPER-- 310
Query: 291 LPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQI 350
+ V++NA++ G ER++ A + MP +S ++NT++ G+ Q
Sbjct: 311 ----------NEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQC 356
Query: 351 RELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLERE 410
++ +A L +M ++ D V++++++ Y G+ + +L +
Sbjct: 357 GKISEAKNLFDKMPKR-----------------DPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 411 MTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMIS----SQCLTMPSYIIYDTLIEN 466
M R G + + ++ + K + R++ + C + ++ +
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLL---MYCK 456
Query: 467 CSYVE-----FKSAVG--------LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLL 513
C +E FK G ++ +S G A E M +KPD A +
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 514 IFDHCRRGNVNKAYEMYKEMVH-YGFFPH 541
+ G V+K + + M YG P+
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPN 545
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 176/437 (40%), Gaps = 84/437 (19%)
Query: 136 DKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAV 195
++A +VF M S +YN I+ YL + E A +F M ER DLVS+N +
Sbjct: 81 NEALRVFKRMPRW----SSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVM 132
Query: 196 ISKFCQDGELEKALEIKAETVEKGILP--DDVTYSALIQALCLQGSLPEAFDLFLEML-R 252
I + ++ L KA E+ I+P D +++ ++ G + +A +F M +
Sbjct: 133 IKGYVRNRNLGKARELFE------IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK 186
Query: 253 GDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGL 312
DVS + L+ AY + A L F + + +LV++N L+ G
Sbjct: 187 NDVS-----WNALLSAYVQNSKMEEACML------------FKSRENWALVSWNCLLGGF 229
Query: 313 CSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDE 372
+++ EA M D VS+NT++ G+ Q ++ +A +L DE + D
Sbjct: 230 VKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKIDEARQL---FDESPV-QDV 281
Query: 373 YTYESLMEGL------------------SDEVTYSSLLNDYFAQGNMQKVFKLEREMTRN 414
+T+ +++ G +EV+++++L Y M+ +L M
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP-- 339
Query: 415 GYLPDSVTLGVFINGLNKKATTSIAKGILLRMISSQCLTMPSYII--------YDTLI-- 464
+ T I G + S AK + +M ++ + I ++ L
Sbjct: 340 --CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 465 -------ENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDH 517
+ F SA+ D L + H R+ + V N L+ +
Sbjct: 398 VQMEREGGRLNRSSFSSALSTCADVVALELGKQ---LHGRLVKGGYETGCFVGNALLLMY 454
Query: 518 CRRGNVNKAYEMYKEMV 534
C+ G++ +A +++KEM
Sbjct: 455 CKCGSIEEANDLFKEMA 471
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 131/318 (41%), Gaps = 65/318 (20%)
Query: 14 MVRMNVMIRGFATESVMSCKEKKVGET---FGLLRMEPYLVSFKGVIKELCEKERMEEAK 70
+V N ++ GF K+KK+ E F + + +VS+ +I + +++EA+
Sbjct: 219 LVSWNCLLGGFV-------KKKKIVEARQFFDSMNVRD-VVSWNTIITGYAQSGKIDEAR 270
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
++ E D T+ A++ G + R + A EL+D+M ER +S +L
Sbjct: 271 QLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-------PERNEVSWNAML 319
Query: 131 CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLV 190
+ + ++ E+ +V+T+N IT Y ++ +A +F M +R D V
Sbjct: 320 AGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPV 375
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYS---------------------- 228
S+ A+I+ + Q G +AL + + +G + ++S
Sbjct: 376 SWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRL 435
Query: 229 -------------ALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEF 275
AL+ C GS+ EA DLF EM D+ N+ ++ Y G
Sbjct: 436 VKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNT----MIAGYSRHGFG 491
Query: 276 SMAFHLHDEMRHRGFLPD 293
+A + M+ G PD
Sbjct: 492 EVALRFFESMKREGLKPD 509
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 126/290 (43%), Gaps = 24/290 (8%)
Query: 12 RHMVRMNVMIRGFATESVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAKE 71
R+ V N M+ G+ M + E F ++ + ++ +I + ++ EAK
Sbjct: 310 RNEVSWNAMLAGYVQGERMEMAK----ELFDVMPCRN-VSTWNTMITGYAQCGKISEAKN 364
Query: 72 VVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLI---- 127
+ +M ++ D ++ A+I G + + A+ L+ QM G N ++ S +
Sbjct: 365 LFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
Query: 128 DLLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSP 187
D++ L+ ++ ++ G+ N + Y +E+A +F MA +
Sbjct: 421 DVVA---LELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGK---- 473
Query: 188 DLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLF 247
D+VS+N +I+ + + G E AL +G+ PDD T A++ A G + + F
Sbjct: 474 DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYF 533
Query: 248 LEMLRG-DVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVI 296
M + V P++ Y ++ L+G + H+ M++ F PD I
Sbjct: 534 YTMTQDYGVMPNSQHYACMVD---LLGRAGLLEDAHNLMKNMPFEPDAAI 580
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 59 ELCEKER----MEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVR 114
+LC K+ E ++V+ EM +G+ + ET+N LI +CK+R A+ L+ +M
Sbjct: 292 KLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEW 351
Query: 115 GLSPNERTYMSLI-DLLCTWWLDKAYKVFNEMIASGF--LPSVATYNKFITAYLSSERVE 171
G P+ TY+ LI L + + ++ ++M ++G+ L + Y F+ ER+E
Sbjct: 352 GCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLE 411
Query: 172 QALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGI 220
A+ +F +M G P + +Y+ ++ K C + +L +A + E +KGI
Sbjct: 412 HAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGI 460
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 98/244 (40%), Gaps = 11/244 (4%)
Query: 56 VIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRG 115
V+K+LCEK A+++V+ + + PD + LI G C + A L +M G
Sbjct: 217 VVKKLCEKGHASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGG 275
Query: 116 LSPNERTYMSLIDLLCTWWLDK--------AYKVFNEMIASGFLPSVATYNKFITAYLSS 167
+ Y ++D +C K KV EM G + T+N I
Sbjct: 276 FEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKI 335
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEI--KAETVEKGILPDDV 225
R E+A+ +F M E G PD +Y +I Q + + E+ K ++ G L +
Sbjct: 336 RRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKK 395
Query: 226 TYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEM 285
Y ++ LC L A +F M P TY LM C + + A L+ E
Sbjct: 396 EYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEA 455
Query: 286 RHRG 289
+G
Sbjct: 456 AKKG 459
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 92/226 (40%), Gaps = 12/226 (5%)
Query: 156 TYNKFITAYLSSERVEQALGIFSAMA-ERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
T I + + R +Q F M + GL D S V+ K C+ G A ++
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKN 236
Query: 215 TVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGE 274
T + I PD+ LI C+ L EA L EM RG Y ++ C +
Sbjct: 237 TANE-IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCR 295
Query: 275 FSMAFHLHDEMRHRGFLPDFVIQFSP-SLVTFNALIHGLCSLERVDEALGILRGMPEMGL 333
F L E+ L + + P + TFN LI+ LC + R +EA+ + M E G
Sbjct: 296 KKDPFKLQPEVEK--VLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGC 353
Query: 334 SPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
PDA +Y IR L +A + E DE I + Y L+
Sbjct: 354 QPDAETY------LVLIRSLYQAARIG-EGDEMIDKMKSAGYGELL 392
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 8/175 (4%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQM 111
+F +I LC+ R EEA + M G PD ETY LI + + + E+ D+M
Sbjct: 324 TFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKM 383
Query: 112 RVRGLSP--NERTYMSLIDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
+ G N++ Y + +LC L+ A VF M A+G P + TY+ + ++
Sbjct: 384 KSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANN 443
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPD 223
++ +A G++ A++G++ Y V +F + +K E+ + ++ LP+
Sbjct: 444 QLTRANGLYKEAAKKGIAVSPKEYR-VDPRFMK----KKTKEVDSNVKKRETLPE 493
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 21/240 (8%)
Query: 147 ASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELE 206
A+ P + I+ + +E++++A + M+ G +YN ++ C+ +
Sbjct: 238 ANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKK 297
Query: 207 KALEIKAETVEK--------GILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPS 258
+++ E VEK G+ + T++ LI LC EA LF M P
Sbjct: 298 DPFKLQPE-VEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPD 356
Query: 259 NSTY---TRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
TY R +Y +GE + D+M+ G+ + + + LC +
Sbjct: 357 AETYLVLIRSLYQAARIGE---GDEMIDKMKSAGYGELLNKK------EYYGFLKILCGI 407
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTY 375
ER++ A+ + + M G P +Y+ ++ C +L +A L E +K I + Y
Sbjct: 408 ERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEY 467
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 132 TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER-GLSPDLV 190
T +DK + EM P V TYN + + V + LG+ S M E +S +++
Sbjct: 190 TRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNII 249
Query: 191 SYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+YN V++ + + L I E V+ GI PD ++Y+A+I +L G++ E+ LF EM
Sbjct: 250 TYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEM 309
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFL 291
+ + PS Y L+ G+F A L DE+++ L
Sbjct: 310 KQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNTSSL 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 48 PY-LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNAL--ICGMCKVRNMLCA 104
PY L+ +I E ++++ +++EM PD TYN++ I G + N +
Sbjct: 174 PYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILG 233
Query: 105 VELYDQMRVRGLSPNERTYMSLIDLL---CTWWLDKAYKVFNEMIASGFLPSVATYNKFI 161
V L +S N TY ++++ + C + D ++NEM+ G P + +Y I
Sbjct: 234 V-LSTMKEDCSVSVNIITYNTVLNGMRKACRF--DMCLVIYNEMVQCGIEPDLLSYTAVI 290
Query: 162 TAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAE 214
+ S V+++L +F M +R + P + Y A+I + G+ + AL++ E
Sbjct: 291 DSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDE 343
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 13/228 (5%)
Query: 140 KVFNE-MIASGFLP-SVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
+VF E +I G P S Y A+++++ + ++E L L+ N +I
Sbjct: 126 RVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIF 185
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
F + +++K L I E E PD +TY++++ L G + E + L ++ D S
Sbjct: 186 AFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGV-LSTMKEDCSV 244
Query: 258 SNS--TYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSL 315
S + TY ++ F M +++EM G PD L+++ A+I L
Sbjct: 245 SVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPD--------LLSYTAVIDSLGRS 296
Query: 316 ERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
V E+L + M + + P Y ++ + + + A +L E+
Sbjct: 297 GNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDEL 344
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 101/269 (37%), Gaps = 65/269 (24%)
Query: 190 VSYNAVISKFCQDGELEKALEIKAETVEKGI-LP--------------DDVTYSALI--Q 232
+ Y ++ KF +DG L A ++ EK I LP +D+ S + +
Sbjct: 71 IDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFRE 130
Query: 233 ALCLQGSLPEAFDLFLEMLRGDVSPSNSTY--------------------TRLMYAYCLV 272
L L G P + D +L + R ++ + TY R+++A+
Sbjct: 131 VLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAET 190
Query: 273 GEFSMAFHLHDEMRHRGFLPDFVI----------------------------QFSPSLVT 304
+ + EM+ PD + S +++T
Sbjct: 191 RQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIIT 250
Query: 305 FNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMD 364
+N +++G+ R D L I M + G+ PD +SY V+ + +K++ L EM
Sbjct: 251 YNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMK 310
Query: 365 EKIIWLDEYTYESLMEGLSDEVTYSSLLN 393
++ I Y Y +L++ L + S L
Sbjct: 311 QRQIRPSVYVYRALIDCLKKSGDFQSALQ 339
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 173/444 (38%), Gaps = 117/444 (26%)
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
N+FITA S +R++ A+ + M E P++ YNA+ F
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQE----PNVFVYNALFKGF------------------ 846
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSM 277
VT S I++L +L++ MLR VSPS+ TY+ L+ A F
Sbjct: 847 -------VTCSHPIRSL----------ELYVRMLRDSVSPSSYTYSSLVKASSFASRFGE 889
Query: 278 AFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDA 337
+ H + GF F ++ +L+ F + + R+ EA + MPE D
Sbjct: 890 SLQAH--IWKFGF--GFHVKIQTTLIDFYS------ATGRIREARKVFDEMPER----DD 935
Query: 338 VSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEG---------------- 381
+++ T++ + ++ ++ A L +M EK +E T L+ G
Sbjct: 936 IAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLINGYMGLGNLEQAESLFNQ 991
Query: 382 --LSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIA 439
+ D +++++++ Y ++ + +M G +PD VT+ I+ I
Sbjct: 992 MPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIG 1051
Query: 440 KGILLRMISSQCLTMPSYIIYDTLIENCSYVEFKSAVG---------------------- 477
K + + T+ + + D I + V+ S G
Sbjct: 1052 KEVHM-------YTLQNGFVLDVYI-GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNS 1103
Query: 478 LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRR-GNVNKAYEMYKEMV-- 534
+++ + G EA +M SVKP+ + + +F C G V++ +Y+ M+
Sbjct: 1104 IIEGLAAHGFAQEALKMFAKMEMESVKPNAVTF-VSVFTACTHAGLVDEGRRIYRSMIDD 1162
Query: 535 --------HYGFFPHMFSVLSLIH 550
HYG H+FS LI+
Sbjct: 1163 YSIVSNVEHYGGMVHLFSKAGLIY 1186
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 59/322 (18%)
Query: 65 RMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYM 124
R+ EA++V EM + D + ++ +V +M A L +QM + NE T
Sbjct: 919 RIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSN 970
Query: 125 SLID-LLCTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAER 183
LI+ + L++A +FN+M + + ++ I Y ++R +A+ +F M E
Sbjct: 971 CLINGYMGLGNLEQAESLFNQMP----VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE 1026
Query: 184 GLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSAL------------- 230
G+ PD V+ + VIS G LE E+ T++ G + D SAL
Sbjct: 1027 GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERA 1086
Query: 231 ------------------IQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLV 272
I+ L G EA +F +M V P+ T+ + A
Sbjct: 1087 LLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHA 1146
Query: 273 GEFSMAFHLHDEMR--HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPE 330
G L DE R +R + D+ I ++ + ++H + EAL ++ M
Sbjct: 1147 G-------LVDEGRRIYRSMIDDYSI--VSNVEHYGGMVHLFSKAGLIYEALELIGNME- 1196
Query: 331 MGLSPDAVSYNTVLFGFCQIRE 352
P+AV + +L G C+I +
Sbjct: 1197 --FEPNAVIWGALLDG-CRIHK 1215
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 184/462 (39%), Gaps = 108/462 (23%)
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVF 142
P+ YNAL G + + ++ELY +M +SP+ TY SL+ F
Sbjct: 834 PNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKA------SSFASRF 887
Query: 143 NEMIAS-----GFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVIS 197
E + + GF V I Y ++ R+ +A +F M ER D +++ ++S
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVS 943
Query: 198 KFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSP 257
+ + +++ A + + EK ++ T + LI G+L +A LF +M D+
Sbjct: 944 AYRRVLDMDSANSLANQMSEK----NEATSNCLINGYMGLGNLEQAESLFNQMPVKDI-- 997
Query: 258 SNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLER 317
+++ +I G +R
Sbjct: 998 ---------------------------------------------ISWTTMIKGYSQNKR 1012
Query: 318 VDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYES 377
EA+ + M E G+ PD V+ +TV+ + L+ E+ + YT
Sbjct: 1013 YREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHM-----------YT--- 1058
Query: 378 LMEGLSDEVTYSSLLNDYFAQ-GNMQKV----FKLEREMTRNGYLPDSVTLGVFINGLNK 432
L G +V S L D +++ G++++ F L + +N + +S+ G+ +G +
Sbjct: 1059 LQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPK---KNLFCWNSIIEGLAAHGFAQ 1115
Query: 433 KATTSIAKGILLRMISSQCLTMPSYI--------------IYDTLIENCSYV-EFKSAVG 477
+A AK + + + +T S IY ++I++ S V + G
Sbjct: 1116 EALKMFAK-MEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGG 1174
Query: 478 LVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCR 519
+V FS GL+ EA E + NM +P+ ++ L+ D CR
Sbjct: 1175 MVHLFSKAGLIYEAL---ELIGNMEFEPNAVIWGALL-DGCR 1212
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 141/355 (39%), Gaps = 43/355 (12%)
Query: 133 WWLDK-AYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVS 191
+WL A +V +I GF V N IT Y + +E A +F M+ER D+VS
Sbjct: 145 FWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER----DVVS 200
Query: 192 YNAVISKFCQDGELEKALEI-KAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEM 250
+N++IS + Q G E ++ KA P+ VT ++ QA L ++ +M
Sbjct: 201 WNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
Query: 251 LRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHR---------------GFLPDFV 295
+ + S ++ Y G A L DEM + G + + +
Sbjct: 261 IENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAM 320
Query: 296 IQFSP----SLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIR 351
FS L T+NA+I GL +E + R M G P+ V+ +++L
Sbjct: 321 ALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSS 380
Query: 352 ELK-----KAYELKVEMDEKII----WLDEYT-------YESLMEGLSDE--VTYSSLLN 393
LK A+ ++ D I +D Y + + + D + +++++
Sbjct: 381 NLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIIT 440
Query: 394 DYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMIS 448
Y G+ L +M G PD VTL ++ + +A+ I M++
Sbjct: 441 AYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLT 495
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 9/231 (3%)
Query: 50 LVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYD 109
L ++ +I L + EE REM R G P+ T ++L+ + N+ E++
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 110 QMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSE 168
G N S+ID +L A +VF+ S+ + ITAY
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDR----SLIAWTAIITAYAVHG 446
Query: 169 RVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEK-GILPDDVTY 227
+ A +F M G PD V+ AV+S F G+ + A I + K I P Y
Sbjct: 447 DSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHY 506
Query: 228 SALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMA 278
+ ++ L G L +A + +M + P + L+ ++G+ +A
Sbjct: 507 ACMVSVLSRAGKLSDAMEFISKM---PIDPIAKVWGALLNGASVLGDLEIA 554
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 146 IASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGEL 205
+ GF+ V + + Y S VE A +F M ER ++VS+ A+IS F Q+ +
Sbjct: 147 LKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPER----NVVSWTAMISGFAQEWRV 202
Query: 206 EKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRL 265
+ L++ ++ + P+D T++AL+ A G+L + + + L + L
Sbjct: 203 DICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSL 262
Query: 266 MYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGIL 325
+ YC G+ AF + D+ ++ +V++N++I G +A+ +
Sbjct: 263 ISMYCKCGDLKDAFRIFDQFSNK------------DVVSWNSMIAGYAQHGLAMQAIELF 310
Query: 326 R-GMPEMGLSPDAVSYNTVLFGFCQ----IRELKKAYELKVEMDEKIIWLDEYTYESLME 380
MP+ G PDA++Y VL C+ ++E +K + L E
Sbjct: 311 ELMMPKSGTKPDAITYLGVL-SSCRHAGLVKEGRKFFNLMAE-----------------H 352
Query: 381 GLSDEVTYSSLLNDYFAQ-GNMQKVFKLEREMTRNGYLPDSVTLGVFI 427
GL E+ + S L D + G +Q+ +L M P+SV G +
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMK---PNSVIWGSLL 397
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 17/284 (5%)
Query: 12 RHMVRMNVMIRGFATE-SVMSCKEKKVGETFGLLRMEPYLVSFKGVIKELCEKERMEEAK 70
R++V MI GFA E V C K+ +P +F ++ + + +
Sbjct: 184 RNVVSWTAMISGFAQEWRVDICL--KLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGR 241
Query: 71 EVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLL 130
V + GL N+LI CK ++ A ++DQ + + ++ S+I
Sbjct: 242 SVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV----SWNSMIAGY 297
Query: 131 CTWWLD-KAYKVFNEMIA-SGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPD 188
L +A ++F M+ SG P TY +++ + V++ F+ MAE GL P+
Sbjct: 298 AQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPE 357
Query: 189 LVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFL 248
L Y+ ++ + G L++ALE+ K P+ V + +L+ + + G +
Sbjct: 358 LNHYSCLVDLLGRFGLLQEALELIENMPMK---PNSVIWGSLLFSCRVHGDVWTGIRAAE 414
Query: 249 E--MLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMRHRGF 290
E ML D + +T+ +L Y VG + A + M+ +G
Sbjct: 415 ERLMLEPDCA---ATHVQLANLYASVGYWKEAATVRKLMKDKGL 455
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 122/263 (46%), Gaps = 23/263 (8%)
Query: 87 TYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTWWLDKAYKVFNEMI 146
+ NALI G + N+ AV L+ +M RG++P+E T+ ++++ F+ I
Sbjct: 597 SMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Query: 147 ASGFLPSVATY--NKFITAYLSSERVEQALGIFSAMAERGLSP-DLVSYNAVISKFCQDG 203
S Y + Y++S + +A +FS ++ SP +V + ++S Q+G
Sbjct: 656 TKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS----SPKSIVLWTGMMSGHSQNG 711
Query: 204 ELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPE--AFDLFLEMLRGDVSPSNST 261
E+AL+ E G+LPD T+ +++ + SL E A + L D+ S
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA 321
MYA C G+ + + DEMR R ++V++N+LI+G ++A
Sbjct: 772 TLIDMYAKC--GDMKGSSQVFDEMRRR-----------SNVVSWNSLINGYAKNGYAEDA 818
Query: 322 LGILRGMPEMGLSPDAVSYNTVL 344
L I M + + PD +++ VL
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVL 841
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/402 (21%), Positives = 163/402 (40%), Gaps = 40/402 (9%)
Query: 51 VSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQ 110
V++ +I + E EA ++ + MN G+ D + + V + +++
Sbjct: 495 VTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCL 554
Query: 111 MRVRGLSPNERTYMSLIDLLCTWWLDK-AYKVFNEMIASGFLP--SVATYNKFITAYLSS 167
GL + T SLID+ + K A KVF+ LP SV + N I Y S
Sbjct: 555 SVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS------LPEWSVVSMNALIAGY-SQ 607
Query: 168 ERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTY 227
+E+A+ +F M RG++P +++ ++ + L + + ++G +
Sbjct: 608 NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYL 667
Query: 228 SALIQALCLQG-SLPEAFDLFLEMLRGDVSPSNST-YTRLMYAYCLVGEFSMAFHLHDEM 285
+ + + + EA LF E+ SP + +T +M + G + A + EM
Sbjct: 668 GISLLGMYMNSRGMTEACALFSEL----SSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 286 RHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLF 345
RH G LPD TF ++ L + E I + + D ++ NT++
Sbjct: 724 RHDGVLPD--------QATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLID 775
Query: 346 GFCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVF 405
+ + ++K + ++ EM + S+ V+++SL+N Y G +
Sbjct: 776 MYAKCGDMKGSSQVFDEMRRR----------------SNVVSWNSLINGYAKNGYAEDAL 819
Query: 406 KLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMI 447
K+ M ++ +PD +T + + S + I MI
Sbjct: 820 KIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMI 861
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/521 (19%), Positives = 201/521 (38%), Gaps = 59/521 (11%)
Query: 48 PYLVSFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVEL 107
P ++F VI ++++A+ + EM+ +PD +N +I G K A+E
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNVMISGHGKRGCETVAIEY 314
Query: 108 YDQMRVRGLSPNERTYMSLIDLL-CTWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
+ MR + T S++ + LD V E I G ++ + ++ Y
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
E++E A +F A+ E+ + V +NA+I + +GE K +E+ + G DD T
Sbjct: 375 CEKMEAAAKVFEALEEK----NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDEMR 286
+++L+ L +++ ++ + L+ Y G A + + M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 287 HRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFG 346
R VT+N +I E EA + + M G+ D + L
Sbjct: 491 DR------------DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKA 538
Query: 347 FCQIRELKKAYELKVEMDEKIIWLDEYTYESLMEGLS------------------DEVTY 388
+ L + ++ + + D +T SL++ S V+
Sbjct: 539 CTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSM 598
Query: 389 SSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTLGVFINGLNKKATTSIAKGILLRMIS 448
++L+ Y +Q N+++ L +EM G P +T + +K + ++ ++
Sbjct: 599 NALIAGY-SQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Query: 449 SQCLTMPSYIIYDTLIENCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGA 508
+ Y+ S +G+ ++RG+ A+ E +S
Sbjct: 658 RGFSSEGEYLGI-------------SLLGMY--MNSRGMTEACALFSE----LSSPKSIV 698
Query: 509 VYNLLIFDHCRRGNVNKAYEMYKEMVHYGFFPHMFSVLSLI 549
++ ++ H + G +A + YKEM H G P + ++++
Sbjct: 699 LWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL 739
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 131/298 (43%), Gaps = 21/298 (7%)
Query: 83 PDCETYNALICGMCKVRNMLCAVELYDQMRVRGLSPNERTYMSLIDLLCTW-WLDKAYKV 141
P+ T++ ++ + N+ +++ M GL N +L+D+ + A +V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 142 FNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQ 201
F ++ P+ + + Y+ + E+A+ +F M + G PD +++ VI+ + +
Sbjct: 218 FEWIVD----PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIR 273
Query: 202 DGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNST 261
G+L+ A + E PD V ++ +I +G A + F M + V + ST
Sbjct: 274 LGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRST 329
Query: 262 YTRLMYAYCLVGEFSMAFHLHDEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEA 321
++ A +V + +H E G + I SLV+ ++ C E+++ A
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIKLGLASN--IYVGSSLVS----MYSKC--EKMEAA 381
Query: 322 LGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEMDEKIIWLDEYTYESLM 379
+ + E + V +N ++ G+ E K EL ++M +D++T+ SL+
Sbjct: 382 AKVFEALEE----KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 136/317 (42%), Gaps = 20/317 (6%)
Query: 53 FKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMR 112
F V++ L EK+ + ++ ++ ++ A D +T++ + + KV A+ ++ +
Sbjct: 106 FNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILD 165
Query: 113 VRGLSPNERTYMSLIDLLCT-WWLDKAYKVFNEM--IASGFLPSVATYNKFITAYLSSER 169
+ T ++I LC+ + +A V + + SG ++ Y + +
Sbjct: 166 KFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISG--NELSVYRSLLFGWSVQRN 223
Query: 170 VEQALGIFSAMAERGLSPDLVSYNAVISKFCQ-------DGELEKALEIKAETVEKGILP 222
V++A + M G++PDL +N++++ C+ G + +AL I E I P
Sbjct: 224 VKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQP 283
Query: 223 DDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLH 282
++Y+ L+ L + E+ + +M R P +Y ++ L G F +
Sbjct: 284 TSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIV 343
Query: 283 DEMRHRGFLPDFVIQFSPSLVTFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNT 342
DEM RGF P+ + LI LC +ERV+ AL + M + Y+
Sbjct: 344 DEMIERGFRPERKFYYD--------LIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDL 395
Query: 343 VLFGFCQIRELKKAYEL 359
++ C+ +K EL
Sbjct: 396 LIPKLCKGGNFEKGREL 412
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 96/238 (40%), Gaps = 8/238 (3%)
Query: 55 GVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCKVRNMLCAVELYDQMRVR 114
+I LC + ++ A V+ + Y +L+ G RN+ A + M+
Sbjct: 178 AIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSA 237
Query: 115 GLSPNERTYMSLIDLLC--------TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLS 166
G++P+ + SL+ LC + + +A + EM + P+ +YN ++
Sbjct: 238 GITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGR 297
Query: 167 SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVT 226
+ RV ++ I M G PD SY V+ G K +I E +E+G P+
Sbjct: 298 TRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKF 357
Query: 227 YSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFSMAFHLHDE 284
Y LI LC + A LF +M R V Y L+ C G F L +E
Sbjct: 358 YYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEE 415
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 46 MEPYLVSFKGVIKELCEKE-------RMEEAKEVVREMNRKGLAPDCETYNALICGMCKV 98
+ P L F ++ LCE+ + EA ++ EM + P +YN L+ + +
Sbjct: 239 ITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRT 298
Query: 99 RNMLCAVELYDQMRVRGLSPNERTYMSLIDLL-CTWWLDKAYKVFNEMIASGFLPSVATY 157
R + + ++ +QM+ G P+ +Y ++ +L T K ++ +EMI GF P Y
Sbjct: 299 RRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFY 358
Query: 158 NKFITAYLSSERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETVE 217
I ERV AL +F M + Y+ +I K C+ G EK E+ E
Sbjct: 359 YDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEA-- 416
Query: 218 KGILPDDVTYSALIQALCLQGSLPEAF 244
L DVT S I L S+ E F
Sbjct: 417 ---LSIDVTLSCSISL--LDPSVTEVF 438
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 18/255 (7%)
Query: 23 GFATESVMS--CKEKKVGETFGLLRMEPYLVS------FKGVIKELCEKERMEEAKEVVR 74
GF +++S C V G++ ++S ++ ++ + ++EA+ V++
Sbjct: 173 GFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQ 232
Query: 75 EMNRKGLAPDCETYNALICGMCKVRNM--------LCAVELYDQMRVRGLSPNERTYMSL 126
+M G+ PD +N+L+ +C+ RN+ A+ + +MR + P +Y L
Sbjct: 233 DMKSAGITPDLFCFNSLLTCLCE-RNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNIL 291
Query: 127 IDLLC-TWWLDKAYKVFNEMIASGFLPSVATYNKFITAYLSSERVEQALGIFSAMAERGL 185
+ L T + ++ ++ +M SG P +Y + + R + I M ERG
Sbjct: 292 LSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGF 351
Query: 186 SPDLVSYNAVISKFCQDGELEKALEIKAETVEKGILPDDVTYSALIQALCLQGSLPEAFD 245
P+ Y +I C + AL++ + + Y LI LC G+ + +
Sbjct: 352 RPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRE 411
Query: 246 LFLEMLRGDVSPSNS 260
L+ E L DV+ S S
Sbjct: 412 LWEEALSIDVTLSCS 426
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 24/247 (9%)
Query: 304 TFNALIHGLCSLERVDEALGILRGMPEMGLSPDAVSYNTVLFGFCQIRELKKAYELKVEM 363
T A+I LCS V ALG++ ++ + Y ++LFG+ R +K+A + +M
Sbjct: 175 TVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDM 234
Query: 364 DEKIIWLDEYTYESLMEGLSDEVTYSSLLNDYFAQGNMQKVFKLEREMTRNGYLPDSVTL 423
I D + + SL+ L + + G + + + EM P S++
Sbjct: 235 KSAGITPDLFCFNSLLTCLCERNVNRN------PSGLVPEALNIMLEMRSYKIQPTSMSY 288
Query: 424 GVFINGLNKKATTSIAKGILLRMISSQC-LTMPSYI-----------------IYDTLIE 465
+ ++ L + + IL +M S C SY I D +IE
Sbjct: 289 NILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIE 348
Query: 466 NCSYVEFKSAVGLVKDFSTRGLVNEAAIAHERMHNMSVKPDGAVYNLLIFDHCRRGNVNK 525
E K L+ VN A E+M SV G VY+LLI C+ GN K
Sbjct: 349 RGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEK 408
Query: 526 AYEMYKE 532
E+++E
Sbjct: 409 GRELWEE 415
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 22/250 (8%)
Query: 52 SFKGVIKELCEKERMEEAKEVVREMNRKGLAPDCETYNALICGMCK---VRNMLCAVELY 108
+F V + L + + E+A + + +++ D T A+I +C V+ L + +
Sbjct: 140 TFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHH 199
Query: 109 DQMRVRGLSPNE-RTYMSLIDLLCTWWLDK----AYKVFNEMIASGFLPSVATYNKFITA 163
+ +S NE Y SL L W + + A +V +M ++G P + +N +T
Sbjct: 200 KDV----ISGNELSVYRSL---LFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTC 252
Query: 164 YLS-------SERVEQALGIFSAMAERGLSPDLVSYNAVISKFCQDGELEKALEIKAETV 216
S V +AL I M + P +SYN ++S + + ++ +I +
Sbjct: 253 LCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMK 312
Query: 217 EKGILPDDVTYSALIQALCLQGSLPEAFDLFLEMLRGDVSPSNSTYTRLMYAYCLVGEFS 276
G PD +Y +++ L L G + + EM+ P Y L+ C V +
Sbjct: 313 RSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVN 372
Query: 277 MAFHLHDEMR 286
A L ++M+
Sbjct: 373 FALQLFEKMK 382