Miyakogusa Predicted Gene
- Lj6g3v2275150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2275150.1 tr|G7IN89|G7IN89_MEDTR Receptor-like protein
kinase OS=Medicago truncatula GN=MTR_2g005810 PE=4
SV=1,84.31,0,Protein kinase-like (PK-like),Protein kinase-like domain;
RNI-like,NULL; L domain-like,NULL; seg,NUL,CUFF.61016.1
(3009 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV429181 similar to UniRef100_A7QCG4 Cluster: Chromosom... 620 e-176
gnl|LJGI|TC68361 133 7e-30
gnl|LJGI|TC69630 similar to UniRef100_A7PN67 Cluster: Chromosome... 62 2e-08
gnl|LJGI|TC64052 similar to UniRef100_A7PJ96 Cluster: Chromosome... 56 1e-06
gnl|LJGI|TC57122 UniRef100_Q8GRU6 Cluster: LRR receptor-like kin... 54 5e-06
>gnl|LJGI|AV429181 similar to UniRef100_A7QCG4 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 313
Score = 620 bits (313), Expect = e-176
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 2273 tgctggtgtacgagtacatgaggaatggaagcttaggtgaggcattgcatgggaagaaag 2332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgctggtgtacgagtacatgaggaatggaagcttaggtgaggcattgcatgggaagaaag 60
Query: 2333 gtgcattcctgagctggaacatgaggtacaaaatctccattgattcagcgaaagggctct 2392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcattcctgagctggaacatgaggtacaaaatctccattgattcagcgaaagggctct 120
Query: 2393 gctaccttcaccatgattgttcaccattgatactccaccgagacgtgaagtcgaacaaca 2452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctaccttcaccatgattgttcaccattgatactccaccgagacgtgaagtcgaacaaca 180
Query: 2453 ttctgttgaattcaaatttcgaagcacacgtcgctgatttcggcctcgcaaagttcttgg 2512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttctgttgaattcaaatttcgaagcacacgtcgctgatttcggcctcgcaaagttcttgg 240
Query: 2513 tggatgccggcgcctccgagtacatgtcttcaattgcaggctcctacggttacattgcac 2572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggatgccggcgcctccgagtacatgtcttcaattgcaggctcctacggttacattgcac 300
Query: 2573 ctgaatatgctta 2585
|||||||||||||
Sbjct: 301 ctgaatatgctta 313
>gnl|LJGI|TC68361
Length = 606
Score = 133 bits (67), Expect = 7e-30
Identities = 77/79 (97%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 1 atggtcccctt-gaccttgattcttttcactctgttttctcttctgggttcctctgtttg 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 atggtcccctttgaccttgattcttttcactctgttttctcttctgggttcctctgtttg 587
Query: 60 tgcttcatccttgctaagt 78
|||||||||||||| ||||
Sbjct: 588 tgcttcatccttgcaaagt 606
>gnl|LJGI|TC69630 similar to UniRef100_A7PN67 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 671
Score = 61.9 bits (31), Expect = 2e-08
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2828 acagtgtggagagacccaccatgagggaagtggtt 2862
|||||||||||||||| ||||||||||||||||||
Sbjct: 376 acagtgtggagagaccaaccatgagggaagtggtt 410
Score = 58.0 bits (29), Expect = 3e-07
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 2530 gagtacatgtcttcaattgcaggctcctacggttacattgcacctgaatatgcttataca 2589
|||| ||||||||| ||||| || || || || ||||| || || || ||||| || |||
Sbjct: 75 gagtgcatgtcttccattgctggttcttatggctacatagctccagagtatgcatacaca 134
Query: 2590 ttgagggtggatgaaaaaagtgatgtttatagttttggagt 2630
|||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 135 ttgaaagtagatgagaaaagtgatgtttatagctttggagt 175
>gnl|LJGI|TC64052 similar to UniRef100_A7PJ96 Cluster: Chromosome chr12 scaffold_18,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_18, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 740
Score = 56.0 bits (28), Expect = 1e-06
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 2560 ggttacattgcacctgaatatgcttatacattgagggtggatgaaaaaagtgatgtttat 2619
|||||||||||||| |||||||||||||| | ||||| | ||||| |||||| |||||
Sbjct: 129 ggttacattgcaccagaatatgcttatactcttcgggtgaacgaaaagagtgatatttat 188
Query: 2620 agttttgg 2627
|| |||||
Sbjct: 189 agctttgg 196
>gnl|LJGI|TC57122 UniRef100_Q8GRU6 Cluster: LRR receptor-like kinase; n=1; Lotus
japonicus|Rep: LRR receptor-like kinase - Lotus
japonicus, complete
Length = 3308
Score = 54.0 bits (27), Expect = 5e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2535 catgtcttcaattgcaggctcctacggttacattgcacctgaatatgctta 2585
|||||| || ||||| |||||||||||||||||||| || || ||||||||
Sbjct: 2668 catgtcctccattgctggctcctacggttacattgctccagagtatgctta 2718