Miyakogusa Predicted Gene

Lj6g3v2275070.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2275070.1 tr|D2STE6|D2STE6_GOSHI Pentatricopeptide repeat
protein OS=Gossypium hirsutum GN=PPR2 PE=2 SV=1,47.06,1e-18,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,Pentatricopeptide repeat;
PPR: pentatricopeptid,CUFF.61039.1
         (306 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP038410 weakly similar to UniRef100_A7QEG3 Cluster: Ch...   109   1e-23

>gnl|LJGI|BP038410 weakly similar to UniRef100_A7QEG3 Cluster: Chromosome chr1
          scaffold_84, whole genome shotgun sequence; n=1; Vitis
          vinifera|Rep: Chromosome chr1 scaffold_84, whole genome
          shotgun sequence - Vitis vinifera (Grape), partial
          (17%)
          Length = 468

 Score =  109 bits (55), Expect = 1e-23
 Identities = 58/59 (98%)
 Strand = Plus / Minus

                                                                     
Query: 1  atgagaattcaaggaatgaaaactaattcttctacctttgtggggctgctttcagcttg 59
          |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 59 atgagaattcaaggaatgaaaactaattcttctacctttgtggggctgcttttagcttg 1