Miyakogusa Predicted Gene
- Lj6g3v2274980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2274980.1 Non Chatacterized Hit- tr|Q2PEP5|Q2PEP5_TRIPR
Putative WD-40 repeat protein (Fragment) OS=Trifolium
,78.76,0,BOP1NT,BOP1, N-terminal domain; WD40,WD40 repeat;
WD_REPEATS_1,WD40 repeat, conserved site; RIBOSOME,CUFF.61011.1
(2172 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58390 similar to UniRef100_A7R5L6 Cluster: Chromosome... 1598 0.0
gnl|LJGI|TC59412 similar to UniRef100_A7R5L6 Cluster: Chromosome... 1447 0.0
gnl|LJGI|TC62306 similar to UniRef100_A7R312 Cluster: Chromosome... 1146 0.0
gnl|LJGI|FS323816 similar to UniRef100_A7R5L6 Cluster: Chromosom... 718 0.0
gnl|LJGI|TC82158 similar to UniRef100_A7R5L6 Cluster: Chromosome... 688 0.0
>gnl|LJGI|TC58390 similar to UniRef100_A7R5L6 Cluster: Chromosome undetermined
scaffold_1000, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1000,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (26%)
Length = 828
Score = 1598 bits (806), Expect = 0.0
Identities = 806/806 (100%)
Strand = Plus / Plus
Query: 1 atgacggagaagaagaagaacaagacgatgagggagaatcatgagggagctccttttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atgacggagaagaagaagaacaagacgatgagggagaatcatgagggagctccttttcct 80
Query: 61 tctgatattgttacttccccagctgtatccgattctgactccgattacgagtccgatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tctgatattgttacttccccagctgtatccgattctgactccgattacgagtccgatgac 140
Query: 121 gccgactcttcttcagatgactccttggattcccaatctcaatctgattttcaattcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gccgactcttcttcagatgactccttggattcccaatctcaatctgattttcaattcgac 200
Query: 181 tcaccagagcatgctagctccgatgattcagaacctgcatcttctcaagatgaggatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaccagagcatgctagctccgatgattcagaacctgcatcttctcaagatgaggatcat 260
Query: 241 gatgatgatgatgaagatagtcaaagtgagaactccgaaagccaccagggaggggatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgatgatgatgaagatagtcaaagtgagaactccgaaagccaccagggaggggatgag 320
Query: 301 agtgactcctcggaggatgaggtggctccgcgaaatactgttggagacgtcccgttgcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgactcctcggaggatgaggtggctccgcgaaatactgttggagacgtcccgttgcag 380
Query: 361 tggtatgaggatgaaccccatattggatacgacaacacgggaaagaagattaagaaaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtatgaggatgaaccccatattggatacgacaacacgggaaagaagattaagaaaaga 440
Query: 421 gaaaagcaagacaaattggattcctttcttgccaacattgatgattctaagcattggcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaagcaagacaaattggattcctttcttgccaacattgatgattctaagcattggcag 500
Query: 481 aagatcgttgatgagtacaatgatgaagtagttgagctgacgaaagaggagatcaaaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagatcgttgatgagtacaatgatgaagtagttgagctgacgaaagaggagatcaaaatt 560
Query: 541 gtccgtagactgctcaagagccgggcaccacattctgactttgacccaaatccggattat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtccgtagactgctcaagagccgggcaccacattctgactttgacccaaatccggattat 620
Query: 601 gttgactggtttaaatgggatgatgccaaccatccaatttctaatgcacctgaaccaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttgactggtttaaatgggatgatgccaaccatccaatttctaatgcacctgaaccaaaa 680
Query: 661 agaaggtttattccctcaaagtgggaagctaaaaaggttgtgcagtatgttagagcaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaaggtttattccctcaaagtgggaagctaaaaaggttgtgcagtatgttagagcaatt 740
Query: 721 cgcaagggattaataacttttgacaagccaaaggaggaagatggtccatatctcttgtgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cgcaagggattaataacttttgacaagccaaaggaggaagatggtccatatctcttgtgg 800
Query: 781 gaagatgattctggtttgactgaaaa 806
||||||||||||||||||||||||||
Sbjct: 801 gaagatgattctggtttgactgaaaa 826
>gnl|LJGI|TC59412 similar to UniRef100_A7R5L6 Cluster: Chromosome undetermined
scaffold_1000, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1000,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 809
Score = 1447 bits (730), Expect = 0.0
Identities = 763/774 (98%), Gaps = 10/774 (1%)
Strand = Plus / Plus
Query: 1 atgacggagaagaagaagaacaagacgatgagggagaatcatgagggagctccttttcct 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 36 atgacggagaagaagaagaacaagacgatgagggagaatgatgagggagctccttttcct 95
Query: 61 tctgatattgttacttccccagctgtatccgattctgactccgattacgagtccgatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 tctgatattgttacttccccagctgtatccgattctgactccgattacgagtccgatgac 155
Query: 121 gccgactcttcttcagatgactccttggattcccaatctcaatctgattttcaattcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gccgactcttcttcagatgactccttggattcccaatctcaatctgattttcaattcgac 215
Query: 181 tcaccagagcatgctagctccgatgattcagaacctgcatcttctcaagatgaggatcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tcaccagagcatgctagctccgatgattcagaacctgcatcttctcaagatgaggatcat 275
Query: 241 ga---------tgatgatgatgaagatagtcaaagtgagaactccgaaagccaccaggga 291
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gatgatgatgatgatgatgatgaagatagtcaaagtgagaactccgaaagccaccaggga 335
Query: 292 ggggatgagagtgactcctcggaggatgaggtggctccgcgaaatactgttggagacgtc 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggggatgagagtgactcctcggaggatgaggtggctccgcgaaatactgttggagacgtc 395
Query: 352 ccgttgcagtggtatgaggatgaaccccatattggatacgacaacacgggaaagaagatt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ccgttgcagtggtatgaggatgaaccccatattggatacgacaacacgggaaagaagatt 455
Query: 412 aagaaaagagaaaagcaagacaaattggattcctttcttgccaacattgatgattctaag 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aagaaaagagaaaagcaagacaaattggattcctttcttgccaacattgatgattctaag 515
Query: 472 cattggcagaagatcgttgatgagtacaatgatgaagtagttgagctgacgaaagaggag 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cattggcagaagatcgttgatgagtacaatgatgaagtagttgagctgacgaaagaggag 575
Query: 532 atcaaaattgtccgtagactgctcaagagccgggcaccacattctgactttgacccaaat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 atcaaaattgtccgtagactgctcaagagccgggcaccacattctgactttgacccaaat 635
Query: 592 ccggattatgttgactggtttaaatgggatgatgccaaccatccaatttctaatgcacct 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ccggattatgttgactggtttaaatgggatgatgccaaccatccaatttctaatgcacct 695
Query: 652 gaaccaaaaagaaggtttattccctcaaagtgggaagctaaaaaggttgtgcagtatgtt 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gaaccaaaaagaaggtttattccctcaaagtgggaagctaaaaaggttgtgcagtatgtt 755
Query: 712 ag-agcaattcgcaagggattaataacttttgacaagccaaaggaggaagatgg 764
|| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 agaagcaattcgcaagggattaataacttttgacaagccaaaggaggaagatgg 809
>gnl|LJGI|TC62306 similar to UniRef100_A7R312 Cluster: Chromosome undetermined
scaffold_470, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_470, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(35%)
Length = 1028
Score = 1146 bits (578), Expect = 0.0
Identities = 608/618 (98%)
Strand = Plus / Plus
Query: 1555 agaggtgactacttttcaacagtgatgccagcaggtgaatctagatcagttctgatccac 1614
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaggtgactactatttcacagtgatgccagcaggtgaatctagatcagttctgatccag 60
Query: 1615 caattgtcgaagaaggttacacaaaaacttccatttaagttaagcgaacttgttgttgga 1674
|| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 61 cagatgtcgaagaaggttacacaaaaacttccatttaagttaagcgaacttgtagttgga 120
Query: 1675 tcaaccttccatccatccctttccatcttctttgtttgtacaaaaaggattgttcgtgtg 1734
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 121 tcaaccttccatccatccctttccatcttctttgtttgtacaaaaaggatggtgcgtgtg 180
Query: 1735 tatgatttagtgaagtctaagcgcttaaaaaagctttatactgggcttagtgaagcctcg 1794
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 181 tatgatttagtgaagtctaagcgcttaaaaaagcttgatactgggcttagtgaagcctcg 240
Query: 1795 tccattgcagttcatcctggaggagataatttaattgtggggagcaaagaagggaaaatg 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tccattgcagttcatcctggaggagataatttaattgtggggagcaaagaagggaaaatg 300
Query: 1855 tgctggtttgacatggacctttcatctaaaccttataaaactcttaagtgtcacccgaaa 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgctggtttgacatggacctttcatctaaaccttataaaactcttaagtgtcacccgaaa 360
Query: 1915 gatatcaacaatgtggtcttccaccgttcatatcccttgtttgcttcatgttcagatgat 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatatcaacaatgtggtcttccaccgttcatatcccttgtttgcttcatgttcagatgat 420
Query: 1975 tgcactgcatatgtttttcacggaatggtttattctgatctcaatcaaaatcctcttatt 2034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgcactgcatatgtttttcacggaatggtttattctgatctcaatcaaaatcctcttatt 480
Query: 2035 gttcctttggaaattctacgaggccatacaaattcaaatggtagagggatattggattgc 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gttcctttggaaattctacgaggccatacaaattcaaatggtagagggatattggattgc 540
Query: 2095 aaatttcatcccagacagccctggttatttacggccggtgctgataaacttattaaagtt 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaatttcatcccagacagccctggttatttacggccggtgctgataaacttattaaagtt 600
Query: 2155 tactgccatcaataaaaa 2172
||||||||||||||||||
Sbjct: 601 tactgccatcaataaaaa 618
>gnl|LJGI|FS323816 similar to UniRef100_A7R5L6 Cluster: Chromosome undetermined
scaffold_1000, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1000,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (16%)
Length = 736
Score = 718 bits (362), Expect = 0.0
Identities = 368/370 (99%)
Strand = Plus / Plus
Query: 230 atgaggatcatgatgatgatgatgaagatagtcaaagtgagaactccgaaagccaccagg 289
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 atgatgatgatgatgatgatgatgaagatagtcaaagtgagaactccgaaagccaccagg 426
Query: 290 gaggggatgagagtgactcctcggaggatgaggtggctccgcgaaatactgttggagacg 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gaggggatgagagtgactcctcggaggatgaggtggctccgcgaaatactgttggagacg 486
Query: 350 tcccgttgcagtggtatgaggatgaaccccatattggatacgacaacacgggaaagaaga 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tcccgttgcagtggtatgaggatgaaccccatattggatacgacaacacgggaaagaaga 546
Query: 410 ttaagaaaagagaaaagcaagacaaattggattcctttcttgccaacattgatgattcta 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttaagaaaagagaaaagcaagacaaattggattcctttcttgccaacattgatgattcta 606
Query: 470 agcattggcagaagatcgttgatgagtacaatgatgaagtagttgagctgacgaaagagg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 agcattggcagaagatcgttgatgagtacaatgatgaagtagttgagctgacgaaagagg 666
Query: 530 agatcaaaattgtccgtagactgctcaagagccgggcaccacattctgactttgacccaa 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 agatcaaaattgtccgtagactgctcaagagccgggcaccacattctgactttgacccaa 726
Query: 590 atccggatta 599
||||||||||
Sbjct: 727 atccggatta 736
Score = 458 bits (231), Expect = e-128
Identities = 234/235 (99%)
Strand = Plus / Plus
Query: 1 atgacggagaagaagaagaacaagacgatgagggagaatcatgagggagctccttttcct 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 47 atgacggagaagaagaagaacaagacgatgagggagaatgatgagggagctccttttcct 106
Query: 61 tctgatattgttacttccccagctgtatccgattctgactccgattacgagtccgatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tctgatattgttacttccccagctgtatccgattctgactccgattacgagtccgatgac 166
Query: 121 gccgactcttcttcagatgactccttggattcccaatctcaatctgattttcaattcgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gccgactcttcttcagatgactccttggattcccaatctcaatctgattttcaattcgac 226
Query: 181 tcaccagagcatgctagctccgatgattcagaacctgcatcttctcaagatgagg 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tcaccagagcatgctagctccgatgattcagaacctgcatcttctcaagatgagg 281
>gnl|LJGI|TC82158 similar to UniRef100_A7R5L6 Cluster: Chromosome undetermined
scaffold_1000, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1000,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (15%)
Length = 357
Score = 688 bits (347), Expect = 0.0
Identities = 353/355 (99%)
Strand = Plus / Plus
Query: 1210 gcttcaggttcaagtgatggaactgtccgtgtctgggaggttgaaactggcagatgtctc 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gcttcaggttcaagtgatggaactgtccgtgtctgggaggttgaaactggcagatgtctc 62
Query: 1270 aggcgatgggaggttggtgaagctgttaactgtgttgcgtggaaccctctgcctgatatt 1329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aggcgatgggaggttggtgaagctgttaactgtgttgcgtggaaccctctgcctgatatt 122
Query: 1330 catattctggctgtctcagtgggacaagatgtacttctactgaacacttgtgtgggcgac 1389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 catattctggctgtctcagtgggacaagatgtacttctactgaacacttgtgtgggcgac 182
Query: 1390 gaagaagaacagaaaaggattaatgagcttctctgggttgactcatcaattgcatcacat 1449
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gaagaagaacaaaaaaggattaatgagcttctctgggttgactcatcaattgcatcacat 242
Query: 1450 gactctggcaaacaatctcctagtgtaagctggcttagagatgataaacatgcgggtata 1509
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 243 gactctggcaaacaatctcctagtgtaagctggcttatagatgataaacatgcgggtata 302
Query: 1510 cggttaaaacatattaagactgttacttctgtggaatggcaccggagaggtgact 1564
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cggttaaaacatattaagactgttacttctgtggaatggcaccggagaggtgact 357