Miyakogusa Predicted Gene
- Lj6g3v2274960.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2274960.1 CUFF.61006.1
(993 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72649 similar to UniRef100_A7QCJ3 Cluster: Chromosome... 1441 0.0
gnl|LJGI|FS338888 weakly similar to UniRef100_O81895 Cluster: Ma... 101 8e-21
gnl|LJGI|GO010241 weakly similar to UniRef100_O81895 Cluster: Ma... 101 8e-21
>gnl|LJGI|TC72649 similar to UniRef100_A7QCJ3 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (62%)
Length = 811
Score = 1441 bits (727), Expect = 0.0
Identities = 727/727 (100%)
Strand = Plus / Plus
Query: 1 atggaagcgaagttgcaagcaaaggcagcttgttttctctggttggagggtttcagagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 atggaagcgaagttgcaagcaaaggcagcttgttttctctggttggagggtttcagagag 144
Query: 61 gcgtgttgccttcatcgcgttcttattctctgtctcaggtcgaggaggcttttggtgcga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 gcgtgttgccttcatcgcgttcttattctctgtctcaggtcgaggaggcttttggtgcga 204
Query: 121 acaggccagtgtttcctcctaaatggttttattttcttaggaagtatattcgtcctaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 acaggccagtgtttcctcctaaatggttttattttcttaggaagtatattcgtcctaagc 264
Query: 181 tcggttgtgatccctgcattgtggtggatattacctgatcaatgctcacagtttgtttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcggttgtgatccctgcattgtggtggatattacctgatcaatgctcacagtttgtttct 324
Query: 241 cataaactgtgtgactcagatggcactttgaaattttattatttcttacgtcttctactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cataaactgtgtgactcagatggcactttgaaattttattatttcttacgtcttctactc 384
Query: 301 attcagctcttttatgtgctttggttttacccattatatgtgtttagcataattctaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attcagctcttttatgtgctttggttttacccattatatgtgtttagcataattctaagc 444
Query: 361 accatctggtacaatgacattgctaaatatggctatgctgcaatgggaagatctaatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 accatctggtacaatgacattgctaaatatggctatgctgcaatgggaagatctaatttt 504
Query: 421 actgaaaagaaaggctctagccaaaactcaccaactatacaaaatgctcatcatgccaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actgaaaagaaaggctctagccaaaactcaccaactatacaaaatgctcatcatgccaaa 564
Query: 481 aaaccatctggtctgggaggggtcatgattggaataggagagcaggtgtattccttactc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaaccatctggtctgggaggggtcatgattggaataggagagcaggtgtattccttactc 624
Query: 541 cttttgagcgttttctttcttgaggtctatgcaactggtttcatcccatacatagggaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cttttgagcgttttctttcttgaggtctatgcaactggtttcatcccatacatagggaag 684
Query: 601 gtgctcaattttttactcctttcgtggatgtatgcatattactgcttcgagtataaatgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtgctcaattttttactcctttcgtggatgtatgcatattactgcttcgagtataaatgg 744
Query: 661 aatttcaatgaagtggctcttgatagaaggctggactactttgaatcattctggccattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aatttcaatgaagtggctcttgatagaaggctggactactttgaatcattctggccattt 804
Query: 721 tttgctg 727
|||||||
Sbjct: 805 tttgctg 811
>gnl|LJGI|FS338888 weakly similar to UniRef100_O81895 Cluster: Male sterility 2-like
protein; n=2; Arabidopsis thaliana|Rep: Male sterility
2-like protein - Arabidopsis thaliana (Mouse-ear cress),
partial (11%)
Length = 792
Score = 101 bits (51), Expect = 8e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 102 gaggaggcttttggtgcgaacaggccagtgtttcctcctaaatggttttattttcttagg 161
|||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct: 361 gaggaggcttttggtgcgaacaagacagtgtttcctcctaaatggtttcattttcttagg 420
Query: 162 aag 164
|||
Sbjct: 421 aag 423
>gnl|LJGI|GO010241 weakly similar to UniRef100_O81895 Cluster: Male sterility 2-like
protein; n=2; Arabidopsis thaliana|Rep: Male sterility
2-like protein - Arabidopsis thaliana (Mouse-ear cress),
partial (11%)
Length = 778
Score = 101 bits (51), Expect = 8e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 102 gaggaggcttttggtgcgaacaggccagtgtttcctcctaaatggttttattttcttagg 161
|||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||
Sbjct: 331 gaggaggcttttggtgcgaacaagacagtgtttcctcctaaatggtttcattttcttagg 390
Query: 162 aag 164
|||
Sbjct: 391 aag 393