Miyakogusa Predicted Gene
- Lj6g3v2274940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2274940.1 Non Chatacterized Hit- tr|F6GYS5|F6GYS5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,39.26,0.000002,FAMILY NOT NAMED,NULL; TCP,Transcription factor,
TCP; TCP,Transcription factor TCP subgroup; seg,NUL,CUFF.61004.1
(1477 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69847 similar to UniRef100_A8MQM9 Cluster: Uncharacte... 733 0.0
gnl|LJGI|AV406330 similar to UniRef100_A7QCJ4 Cluster: Chromosom... 507 e-143
gnl|LJGI|AV768606 homologue to UniRef100_Q8H945 Cluster: Phospho... 406 e-112
gnl|LJGI|TC62356 weakly similar to UniRef100_Q3HTK5 Cluster: Phe... 276 4e-73
gnl|LJGI|BP040041 homologue to UniRef100_Q5TPK0 Cluster: AGAP003... 262 6e-69
gnl|LJGI|TC73517 homologue to UniRef100_A7QEF9 Cluster: Chromoso... 117 2e-25
gnl|LJGI|TC77851 homologue to UniRef100_Q70I19 Cluster: TCP-doma... 113 3e-24
gnl|LJGI|TC68665 homologue to UniRef100_A7PY71 Cluster: Chromoso... 100 5e-20
gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcript... 94 3e-18
>gnl|LJGI|TC69847 similar to UniRef100_A8MQM9 Cluster: Uncharacterized protein
At1g58100.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At1g58100.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (8%)
Length = 629
Score = 733 bits (370), Expect = 0.0
Identities = 411/431 (95%)
Strand = Plus / Plus
Query: 1047 ggtgaccgcgggcggcgcggtcaattccgcttcagacaatcaacacacgatgtggccttt 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgaccgcgggcggcgcggtcaattccgcttcagacaatcaacacacgatgtggccttt 60
Query: 1107 tcctcctccaccacaagctggtgggaacgcgaataatccagctcagttgcatttcatgca 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcctcctccaccacaagctggtgggaacgcgaataatccagctcagttgcatttcatgca 120
Query: 1167 gaggttcaatcttccaacagggggtgtcggtgttgaattccaaggtggacgtagtagtgg 1226
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaggttcaattttccaacagggggtgtcggtgttgaattccaaggtggacgtagtagtgg 180
Query: 1227 tttacaattgggttccatgtaccaaccaccctctcagcatcttgggttggccatgtctga 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttacaattgggttccatgtaccaaccaccctctcagcatcttgggttggccatgtctga 240
Query: 1287 ttccaacttgggtatgttggcggctctcaatgcatacagtnnnnnnnnnnnnnnnnnnng 1346
|||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 ttccaacttgggtatgttggcggctctcaatgcatacagtaacaacaacaacaacaacag 300
Query: 1347 aggtttcaatgtcaattctgatcaccaaactcaaaatcatcatcatcattccttggagca 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggtttcaatgtcaattctgatcaccaaactcaaaatcatcatcatcattccttggagca 360
Query: 1407 ccaacaccaagctcagccgcaacctactacagacagcggaggagaagatggtcctaatag 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaacaccaagctcagccgcaacctactacagacagcggaggagaagatggtcctaatag 420
Query: 1467 ctcgcaataac 1477
|||||||||||
Sbjct: 421 ctcgcaataac 431
>gnl|LJGI|AV406330 similar to UniRef100_A7QCJ4 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 256
Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 469 gaattggggcacaagtccgacggagagaccatcgagtggctcctccagcaggccgagccg 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaattggggcacaagtccgacggagagaccatcgagtggctcctccagcaggccgagccg 60
Query: 529 gccatcatcgccgccaccggcaccgggacaatccccgccaacttctccaccctcaacgtt 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccatcatcgccgccaccggcaccgggacaatccccgccaacttctccaccctcaacgtt 120
Query: 589 tctctccgaagcagcgggtccacgctgtcggctccgccgtcgaagtccgccccgcatact 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tctctccgaagcagcgggtccacgctgtcggctccgccgtcgaagtccgccccgcatact 180
Query: 649 tttcacggcgcggcgcttgggctggcacaccagtcttacgaggaagcgttccagcagcac 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tttcacggcgcggcgcttgggctggcacaccagtcttacgaggaagcgttccagcagcac 240
Query: 709 acacctatgctagggt 724
||||||||||||||||
Sbjct: 241 acacctatgctagggt 256
>gnl|LJGI|AV768606 homologue to UniRef100_Q8H945 Cluster: Phosphoenolpyruvate
carboxylase; n=1; Lotus japonicus|Rep:
Phosphoenolpyruvate carboxylase - Lotus japonicus,
partial (5%)
Length = 566
Score = 406 bits (205), Expect = e-112
Identities = 243/262 (92%)
Strand = Plus / Minus
Query: 1216 cgtagtagtggtttacaattgggttccatgtaccaaccaccctctcagcatcttgggttg 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cgtagtagtggtttacaattgggttccatgtaccaaccaccctctcagcatcttgggttg 507
Query: 1276 gccatgtctgattccaacttgggtatgttggcggctctcaatgcatacagtnnnnnnnnn 1335
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gccatgtctgattccaacttgggtatgttggcggctctcaatgcatacagtaacaacaac 447
Query: 1336 nnnnnnnnnngaggtttcaatgtcaattctgatcaccaaactcaaaatcatcatcatcat 1395
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aacaacaacagaggtttcaatgtcaattctgatcaccaaactcaaaatcatcatcatcat 387
Query: 1396 tccttggagcaccaacaccaagctcagccgcaacctactacagacagcggaggagaagat 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tccttggagcaccaacaccaagctcagccgcaacctactacagacagcggaggagaagat 327
Query: 1456 ggtcctaatagctcgcaataac 1477
||||||||||||||||||||||
Sbjct: 326 ggtcctaatagctcgcaataac 305
>gnl|LJGI|TC62356 weakly similar to UniRef100_Q3HTK5 Cluster: Pherophorin-C2 protein
precursor; n=1; Chlamydomonas reinhardtii|Rep:
Pherophorin-C2 protein precursor - Chlamydomonas
reinhardtii, partial (6%)
Length = 718
Score = 276 bits (139), Expect = 4e-73
Identities = 139/139 (100%)
Strand = Plus / Plus
Query: 44 gaggaactagtactactcatcatccccaccaccaccaacaagaaccttctccttctcctc 103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaggaactagtactactcatcatccccaccaccaccaacaagaaccttctccttctcctc 424
Query: 104 cttcttctgttttcgatggcagacaatctgcacccttcatcatgggctccatgtccatcc 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cttcttctgttttcgatggcagacaatctgcacccttcatcatgggctccatgtccatcc 484
Query: 164 aagctggcctcaccacaac 182
|||||||||||||||||||
Sbjct: 485 aagctggcctcaccacaac 503
Score = 196 bits (99), Expect = 3e-49
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 244 gcccccgccccctctcaactcattgacgcctccttagccatcgccaccagatctgaccct 303
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcccccgtcccctctcaactcattgacgcctccttagccatcgccaccagatctgaccct 624
Query: 304 cccacccaccagttaaccatcgcagnnnnnnnnnnnnnnnnngtcaccaccgtcgccaac 363
||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 625 cccacccaccagttaaccatcgcagcccccacccccgcccccgtcaccaccgtcgccaac 684
Query: 364 ccgcccaagcgatccactaaagacaggcacacca 397
||||||||||||||||||||||||||||||||||
Sbjct: 685 ccgcccaagcgatccactaaagacaggcacacca 718
>gnl|LJGI|BP040041 homologue to UniRef100_Q5TPK0 Cluster: AGAP003983-PA; n=1; Anopheles
gambiae str. PEST|Rep: AGAP003983-PA - Anopheles gambiae
str., partial (1%)
Length = 485
Score = 262 bits (132), Expect = 6e-69
Identities = 132/132 (100%)
Strand = Plus / Minus
Query: 1346 gaggtttcaatgtcaattctgatcaccaaactcaaaatcatcatcatcattccttggagc 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaggtttcaatgtcaattctgatcaccaaactcaaaatcatcatcatcattccttggagc 389
Query: 1406 accaacaccaagctcagccgcaacctactacagacagcggaggagaagatggtcctaata 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 accaacaccaagctcagccgcaacctactacagacagcggaggagaagatggtcctaata 329
Query: 1466 gctcgcaataac 1477
||||||||||||
Sbjct: 328 gctcgcaataac 317
>gnl|LJGI|TC73517 homologue to UniRef100_A7QEF9 Cluster: Chromosome chr1 scaffold_84,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_84, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 811
Score = 117 bits (59), Expect = 2e-25
Identities = 116/135 (85%)
Strand = Plus / Plus
Query: 439 tgcgccgccagggttttccagctcaccagagaattggggcacaagtccgacggagagacc 498
|||||||||||||| |||||||| || | || | || |||||||||||||| ||||||
Sbjct: 397 tgcgccgccagggtgttccagctgacgcgtgagctaggacacaagtccgacggtgagacc 456
Query: 499 atcgagtggctcctccagcaggccgagccggccatcatcgccgccaccggcaccgggaca 558
||||||||||||||||||||||| ||||| || |||||||||||||||| || |||||
Sbjct: 457 atcgagtggctcctccagcaggctgagccagcagtcatcgccgccaccgggactgggacc 516
Query: 559 atccccgccaacttc 573
|| || |||||||||
Sbjct: 517 attcctgccaacttc 531
>gnl|LJGI|TC77851 homologue to UniRef100_Q70I19 Cluster: TCP-domain protein; n=1;
Antirrhinum majus subsp. majus|Rep: TCP-domain protein -
Antirrhinum majus subsp. majus, partial (30%)
Length = 607
Score = 113 bits (57), Expect = 3e-24
Identities = 162/197 (82%)
Strand = Plus / Plus
Query: 377 ccactaaagacaggcacaccaaggtcgatggccgcggcaggagaattcgaatgccggcca 436
|||| |||||| ||||||| ||||| || ||||||||| | | || || |||||||||
Sbjct: 369 ccaccaaagaccggcacacaaaggtagacggccgcggccgccgcatccgtatgccggccc 428
Query: 437 cgtgcgccgccagggttttccagctcaccagagaattggggcacaagtccgacggagaga 496
||||| |||||||| |||||||||||| | || | || |||||||||||||| || |
Sbjct: 429 tctgcgctgccagggtcttccagctcacccgggagctcggccacaagtccgacggtgaaa 488
Query: 497 ccatcgagtggctcctccagcaggccgagccggccatcatcgccgccaccggcaccggga 556
||||||||||||||||||||||||| ||||| | | ||||||||||| || ||||| |
Sbjct: 489 ccatcgagtggctcctccagcaggctgagccctcggtaatcgccgccactggaaccggca 548
Query: 557 caatccccgccaacttc 573
| |||||||| ||||||
Sbjct: 549 ccatccccgcaaacttc 565
>gnl|LJGI|TC68665 homologue to UniRef100_A7PY71 Cluster: Chromosome chr15
scaffold_37, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_37, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 601
Score = 99.6 bits (50), Expect = 5e-20
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 427 atgccggccacgtgcgccgccagggttttccagctcaccagagaattggggcacaagtcc 486
||||| ||||||||||| ||| || | |||||||||||| | || | || |||| ||||
Sbjct: 264 atgcccgccacgtgcgctgcccggatcttccagctcacccgggagctcggccacaggtcc 323
Query: 487 gacggagagaccatcgagtggctcctccagcaggccgagccggccatcatcgccgccacc 546
||||| || ||||| ||||||||| | || |||||||| ||||||||||||||||||
Sbjct: 324 gacggcgaaaccatacgctggctcctcgaacacgccgagccagccatcatcgccgccacc 383
Query: 547 ggcaccgggacaatccccgcca 568
|||||||||||| |||||||||
Sbjct: 384 ggcaccgggacagtccccgcca 405
>gnl|LJGI|TC79965 similar to UniRef100_Q6K7P2 Cluster: Transcription factor
PCF3-like; n=1; Oryza sativa Japonica Group|Rep:
Transcription factor PCF3-like - Oryza sativa subsp.
japonica (Rice), partial (49%)
Length = 771
Score = 93.7 bits (47), Expect = 3e-18
Identities = 86/99 (86%)
Strand = Plus / Plus
Query: 478 cacaagtccgacggagagaccatcgagtggctcctccagcaggccgagccggccatcatc 537
||||||||||| || ||||||||||||||||||||| || || ||||| ||||||||
Sbjct: 420 cacaagtccgatggccagaccatcgagtggctcctccgtcaagctgagccctccatcatc 479
Query: 538 gccgccaccggcaccgggacaatccccgccaacttctcc 576
||||||||||||||||| || | |||||||| |||||||
Sbjct: 480 gccgccaccggcaccggcaccacccccgccagcttctcc 518