Miyakogusa Predicted Gene
- Lj6g3v2274750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2274750.1 tr|B9GZ61|B9GZ61_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1073270 PE=4
SV=1,93.02,0,seg,NULL; EMP70,Nonaspanin (TM9SF); ENDOMEMBRANE PROTEIN
EMP70,NULL; TRANSMEMBRANE 9 SUPERFAMILY PRO,CUFF.61052.1
(1206 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68790 homologue to UniRef100_O04091 Cluster: Endomemb... 680 0.0
gnl|LJGI|AV406356 homologue to UniRef100_O04091 Cluster: Endomem... 527 e-149
gnl|LJGI|TC59085 similar to UniRef100_A7QCN1 Cluster: Chromosome... 418 e-116
gnl|LJGI|TC69355 similar to UniRef100_Q02758 Cluster: ATP syntha... 111 1e-23
gnl|LJGI|AV768580 homologue to UniRef100_O04091 Cluster: Endomem... 92 1e-17
>gnl|LJGI|TC68790 homologue to UniRef100_O04091 Cluster: Endomembrane protein EMP70
precusor isolog; 68664-64364; n=1; Arabidopsis
thaliana|Rep: Endomembrane protein EMP70 precusor isolog;
68664-64364 - Arabidopsis thaliana (Mouse-ear cress),
partial (19%)
Length = 771
Score = 680 bits (343), Expect = 0.0
Identities = 346/347 (99%)
Strand = Plus / Plus
Query: 860 aggtgtactatgtctatggcttcatgctactggtttttataattcttctcattgttaccg 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 aggtgtactatgtctatggcttcatgctactggtttttataattcttctcattgttaccg 76
Query: 920 tatgtgtgacaatcgtggggacatactttttgttgaatgctgagaactaccactggcgat 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tatgtgtgacaatcgtggggacatactttttgttgaatgctgagaactaccactggcgat 136
Query: 980 ggacttctttcttttcagctgcctcaacagcagtttatgtgtatttgtactcaatatact 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 ggacttctttcttttcagctgcctcaacagcagtttatgtgtatttgtactcaatatact 196
Query: 1040 actactatgtgaagacaaagatgtcaggcttcttccaaaccagcttctattttggataca 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 actactatgtgaagacaaagatgtcaggcttcttccaaaccagcttctattttggataca 256
Query: 1100 ctttgatgctttgtctaggactgggaattctctgtggagctgtgggttatcttggttcga 1159
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ctttgatgttttgtctaggactgggaattctctgtggagctgtgggttatcttggttcga 316
Query: 1160 atttgtttgtgaggaggatctacagaaacatcaagtgtgactaaggc 1206
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atttgtttgtgaggaggatctacagaaacatcaagtgtgactaaggc 363
>gnl|LJGI|AV406356 homologue to UniRef100_O04091 Cluster: Endomembrane protein EMP70
precusor isolog; 68664-64364; n=1; Arabidopsis
thaliana|Rep: Endomembrane protein EMP70 precusor isolog;
68664-64364 - Arabidopsis thaliana (Mouse-ear cress),
partial (23%)
Length = 411
Score = 527 bits (266), Expect = e-149
Identities = 374/410 (91%)
Strand = Plus / Plus
Query: 670 ggcacagttgttggaagaaactggagtggcgctccaaataatccctgtcgtgtaaagacc 729
||||||| |||||||||||||| || || |||||||||||||| ||||||||||||||
Sbjct: 2 ggcacagctgttggaagaaactttagcggtgctccaaataatccttgtcgtgtaaagact 61
Query: 730 attcctcgtcccattcctgagaagaagtggtacctcacaccctctgtagtttctatgatg 789
|||||||||||||||||||||||||||||||||||||||||||| || |||||| | |||
Sbjct: 62 attcctcgtcccattcctgagaagaagtggtacctcacaccctcagtggtttctcttatg 121
Query: 790 ggaggattgcttccctttggcagcatattcattgagatgtattttgtatttacttccttc 849
|||||| || | || |||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 122 ggaggactgttaccttttggcagcatattcattgaaatgtatttcgtatttacttccttc 181
Query: 850 tggaattacaaggtgtactatgtctatggcttcatgctactggtttttataattcttctc 909
||||||||||||||||||||||| ||||| || ||||||||||||||| | || || ||
Sbjct: 182 tggaattacaaggtgtactatgtgtatggatttatgctactggtttttctgatcctggtc 241
Query: 910 attgttaccgtatgtgtgacaatcgtggggacatactttttgttgaatgctgagaactac 969
|||||||| || ||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 242 attgttactgtttgtgtgacaattgtggggacttactttttgttaaatgctgagaactac 301
Query: 970 cactggcgatggacttctttcttttcagctgcctcaacagcagtttatgtgtatttgtac 1029
||||||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||||
Sbjct: 302 cactggcaatggacttctttcttttcagctgcctcgacagctgcttatgtgtatttgtac 361
Query: 1030 tcaatatactactactatgtgaagacaaagatgtcaggcttcttccaaac 1079
|| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 362 tcgatatactactactatgtcaagacaaagatgtcaggcttcttccaaac 411
>gnl|LJGI|TC59085 similar to UniRef100_A7QCN1 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 813
Score = 418 bits (211), Expect = e-116
Identities = 211/211 (100%)
Strand = Plus / Plus
Query: 1 atgacatattccgtcaaatggattcctactaatatcactttcagacgccgatttgatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 atgacatattccgtcaaatggattcctactaatatcactttcagacgccgatttgatgta 662
Query: 61 tatctagactatccgttctttgagcatcagattcattggttctccattttcaactctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tatctagactatccgttctttgagcatcagattcattggttctccattttcaactctttc 722
Query: 121 atgatggtcatctttctaactggattggtgtcaatgatattaatgcggactttgagaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 atgatggtcatctttctaactggattggtgtcaatgatattaatgcggactttgagaaat 782
Query: 181 gactatgctaagtatgctcgggaagatgatg 211
|||||||||||||||||||||||||||||||
Sbjct: 783 gactatgctaagtatgctcgggaagatgatg 813
>gnl|LJGI|TC69355 similar to UniRef100_Q02758 Cluster: ATP synthase delta chain,
chloroplast precursor; n=1; Pisum sativum|Rep: ATP
synthase delta chain, chloroplast precursor - Pisum
sativum (Garden pea), partial (12%)
Length = 850
Score = 111 bits (56), Expect = 1e-23
Identities = 68/72 (94%)
Strand = Plus / Plus
Query: 1135 ggagctgtgggttatcttggttcgaatttgtttgtgaggaggatctacagaaacatcaag 1194
|||| ||||||||||||||||| |||||||||||||| || |||||||||||||||||||
Sbjct: 410 ggagttgtgggttatcttggtttgaatttgtttgtgaagaagatctacagaaacatcaag 469
Query: 1195 tgtgactaaggc 1206
||||||||||||
Sbjct: 470 tgtgactaaggc 481
>gnl|LJGI|AV768580 homologue to UniRef100_O04091 Cluster: Endomembrane protein EMP70
precusor isolog; 68664-64364; n=1; Arabidopsis
thaliana|Rep: Endomembrane protein EMP70 precusor isolog;
68664-64364 - Arabidopsis thaliana (Mouse-ear cress),
partial (5%)
Length = 485
Score = 91.7 bits (46), Expect = 1e-17
Identities = 79/90 (87%)
Strand = Plus / Minus
Query: 1117 ggactgggaattctctgtggagctgtgggttatcttggttcgaatttgtttgtgaggagg 1176
||||| |||||| | || || |||||||| | ||||||||| ||||||||||||||||||
Sbjct: 474 ggactaggaattttatgcggtgctgtgggatttcttggttcaaatttgtttgtgaggagg 415
Query: 1177 atctacagaaacatcaagtgtgactaaggc 1206
||||||||||| |||||||| || ||||||
Sbjct: 414 atctacagaaatatcaagtgcgattaaggc 385