Miyakogusa Predicted Gene

Lj6g3v2274660.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2274660.1 tr|G7IPE1|G7IPE1_MEDTR Serine
hydroxymethyltransferase OS=Medicago truncatula GN=MTR_2g006570 PE=3
S,90.28,0,SHMT,Serine hydroxymethyltransferase; SUBFAMILY NOT
NAMED,NULL; SERINE
HYDROXYMETHYLTRANSFERASE,Seri,
NODE_31526_length_2364_cov_86.197548.path2.1
         (1260 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64005 similar to UniRef100_A9PL07 Cluster: Serine hyd...   458   e-128
gnl|LJGI|FS339145 similar to UniRef100_A9PL07 Cluster: Serine hy...    90   4e-17

>gnl|LJGI|TC64005 similar to UniRef100_A9PL07 Cluster: Serine hydroxymethyltransferase;
            n=1; Populus tremuloides|Rep: Serine
            hydroxymethyltransferase - Populus tremuloides (Quaking
            aspen), partial (13%)
          Length = 881

 Score =  458 bits (231), Expect = e-128
 Identities = 231/231 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1030 ggaggtgtaagaataggtacgcctgccatgacttcaagagggtgtctggagcctgatttt 1089
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2    ggaggtgtaagaataggtacgcctgccatgacttcaagagggtgtctggagcctgatttt 61

                                                                        
Query: 1090 gagaccatggctgaatttctctttagagctgtacaaattgcgagtaagcaaagggagcat 1149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62   gagaccatggctgaatttctctttagagctgtacaaattgcgagtaagcaaagggagcat 121

                                                                        
Query: 1150 ggtaaattccagagtttgaagggacttgaaagcaatagggacattcttgagctacggtca 1209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122  ggtaaattccagagtttgaagggacttgaaagcaatagggacattcttgagctacggtca 181

                                                               
Query: 1210 cgggttgaaagttttgcaactcagtttgcaatgccaggttttgacatttga 1260
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182  cgggttgaaagttttgcaactcagtttgcaatgccaggttttgacatttga 232


>gnl|LJGI|FS339145 similar to UniRef100_A9PL07 Cluster: Serine
           hydroxymethyltransferase; n=1; Populus tremuloides|Rep:
           Serine hydroxymethyltransferase - Populus tremuloides
           (Quaking aspen), partial (44%)
          Length = 749

 Score = 89.7 bits (45), Expect = 4e-17
 Identities = 222/281 (79%)
 Strand = Plus / Plus

                                                                       
Query: 334 tacaaggtgaaccctcaatcagggtatgttgattatgataaacttgaggaaagggccctt 393
           |||||||| || |||||| | |||||| | |||||||| || ||||||||||  ||  | 
Sbjct: 100 tacaaggttaatcctcaaactgggtatatagattatgacaagcttgaggaaaaagctgtg 159

                                                                       
Query: 394 gattttcgtcccaagatactcatttgtggtgggagctcgtatccccgcgaatgggattac 453
           |||||||| || |||||||| ||||||||||| || || |||||  | || |||||||| 
Sbjct: 160 gattttcgacctaagatacttatttgtggtggaagttcttatcctagagagtgggattat 219

                                                                       
Query: 454 gctaggtttaggcacattgctgataaatgtggtgctgttttattgtgtgacatggcccag 513
           |  ||||| ||||| |||||||||||||| || || || ||  ||||||||||||| || 
Sbjct: 220 gggaggttcaggcagattgctgataaatgcggggcggtgttgatgtgtgacatggctcat 279

                                                                       
Query: 514 attagtggcctaattgctgccaaggagtgttcaagcccctttgattattgtgatgttgtt 573
           || ||||| ||  | || || |||||  |    || || ||| |||| |||||| |||||
Sbjct: 280 atcagtggtcttgtggcagctaaggaaggagttagtccatttaattactgtgatattgtt 339

                                                    
Query: 574 acttcaacaactcacaagagtcttcgaggtcctaggggagg 614
           ||||||||||| ||||| ||||| || ||||| ||||||||
Sbjct: 340 acttcaacaacccacaaaagtctccggggtccaaggggagg 380



 Score = 85.7 bits (43), Expect = 6e-16
 Identities = 109/131 (83%)
 Strand = Plus / Plus

                                                                       
Query: 730 tcattgcaaggtggtccgcacaataaccatattgctgcacttgctatagcattaaaacaa 789
           ||||| |||||||| || |||||||| || |||||||| ||||| ||| | || ||||||
Sbjct: 493 tcattacaaggtggaccccacaataatcacattgctgctcttgccatatctttcaaacaa 552

                                                                       
Query: 790 gtggctactcccgaatataaggcatacatgcagcaggtgaagaagaatgctcaagcttta 849
           || || ||||| || || || ||||| ||||||||||||||||| ||||| || || |||
Sbjct: 553 gttgcaactccagagtacaaagcatatatgcagcaggtgaagaaaaatgcacaggcatta 612

                      
Query: 850 gcaactgcctt 860
           ||| |||||||
Sbjct: 613 gcatctgcctt 623