Miyakogusa Predicted Gene

Lj6g3v2274510.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2274510.1 CUFF.60981.1
         (469 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP053514                                                      86   2e-16
gnl|LJGI|TC80790 similar to UniRef100_A7NV49 Cluster: Chromosome...    80   1e-14
gnl|LJGI|TC60780 similar to UniRef100_A7NV49 Cluster: Chromosome...    62   3e-09
gnl|LJGI|AV771560 similar to UniRef100_A9V9S1 Cluster: Predicted...    56   2e-07

>gnl|LJGI|BP053514 
          Length = 478

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                       
Query: 265 atggaggaattgaaagtggagttggagagaatggcaggatatgaagcacatggtgatgat 324
           ||||| |||||||||||||||||||||||||| ||||| |||||| ||||   || ||||
Sbjct: 431 atggaagaattgaaagtggagttggagagaatagcaggttatgaaacacaatatggtgat 372

                                          
Query: 325 atccaagaaaaagttgaaaatgtgaagagtt 355
           |||||||||||| |||| ||  |||||||||
Sbjct: 371 atccaagaaaaatttgataacatgaagagtt 341



 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                       
Query: 382 gagactataacagggcaacttgatgatttctttgatgaaatagtagaaggaagaaagaag 441
           ||||||||| ||| ||| ||||||||||||||| ||||||||||||||||||   |||||
Sbjct: 335 gagactatatcagtgcagcttgatgatttctttaatgaaatagtagaaggaatgtagaag 276

                                       
Query: 442 cttttggacatgtgcagtcataggtaga 469
            || ||| |||||||  |||||||||||
Sbjct: 275 tttctggtcatgtgctatcataggtaga 248


>gnl|LJGI|TC80790 similar to UniRef100_A7NV49 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 1077

 Score = 79.8 bits (40), Expect = 1e-14
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 400 cttgatgatttctttgatgaaatagtagaaggaagaaagaagcttttggacatgtgcagt 459
           |||||||||||||||||||| || || |||||||| ||||||||||||||| | ||||| 
Sbjct: 183 cttgatgatttctttgatgagattgttgaaggaaggaagaagcttttggacttttgcagc 242

                   
Query: 460 cataggta 467
           ||||||||
Sbjct: 243 cataggta 250


>gnl|LJGI|TC60780 similar to UniRef100_A7NV49 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 729

 Score = 61.9 bits (31), Expect = 3e-09
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 385 actataacagggcaacttgatgatttctttgatgaaatagtagaaggaagaaagaagctt 444
           |||| ||||||| |||| |||||||||||  || |||||| ||||||||| |||||||||
Sbjct: 455 actacaacagggaaactcgatgatttcttcaatcaaatagcagaaggaaggaagaagctt 514

              
Query: 445 ttg 447
           |||
Sbjct: 515 ttg 517


>gnl|LJGI|AV771560 similar to UniRef100_A9V9S1 Cluster: Predicted protein; n=1;
           Monosiga brevicollis MX1|Rep: Predicted protein -
           Monosiga brevicollis MX1, partial (12%)
          Length = 445

 Score = 56.0 bits (28), Expect = 2e-07
 Identities = 59/68 (86%), Gaps = 1/68 (1%)
 Strand = Plus / Minus

                                                                       
Query: 398 aacttgatgatttctttgatgaaatagtagaaggaagaaagaagcttttggacatgtgca 457
           |||| |||||||||||  | ||||||||||||||||| ||| ||||||||| ||| || |
Sbjct: 232 aactcgatgatttcttcaacgaaatagtagaaggaaggaag-agcttttgggcatatgaa 174

                   
Query: 458 gtcatagg 465
           ||||||||
Sbjct: 173 gtcatagg 166