Miyakogusa Predicted Gene

Lj6g3v2274490.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2274490.1 tr|G7IPF9|G7IPF9_MEDTR Potassium channel
OS=Medicago truncatula GN=MTR_2g006870 PE=4 SV=1,84.86,0,no
description,NULL; no description,RmlC-like jelly roll fold; no
description,Ankyrin repeat-contain,CUFF.60980.1
         (2499 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594567 homologue to UniRef100_O24538 Cluster: Potassi...   224   2e-57
gnl|LJGI|BP075741 similar to UniRef100_O24538 Cluster: Potassium...   182   7e-45
gnl|LJGI|TC75371                                                      125   1e-27

>gnl|LJGI|DC594567 homologue to UniRef100_O24538 Cluster: Potassium channel; n=1;
           Vicia faba|Rep: Potassium channel - Vicia faba (Broad
           bean), partial (7%)
          Length = 512

 Score =  224 bits (113), Expect = 2e-57
 Identities = 134/137 (97%), Gaps = 3/137 (2%)
 Strand = Plus / Plus

                                                                       
Query: 482 atgtggcatcaaccataccgtatgaggcaatt-gggtactt-gttca-ctggaaaacaca 538
           |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||
Sbjct: 1   atgtggcatcaaccataccgtatgaggcaattngggtacttngttcanctggaaaacaca 60

                                                                       
Query: 539 aactcagtctcccttacttcctgctcggcatgctcagattgtggcggattagacgtgtca 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aactcagtctcccttacttcctgctcggcatgctcagattgtggcggattagacgtgtca 120

                            
Query: 599 agcaattctttacaagg 615
           |||||||||||||||||
Sbjct: 121 agcaattctttacaagg 137



 Score =  125 bits (63), Expect = 1e-27
 Identities = 63/63 (100%)
 Strand = Plus / Plus

                                                                       
Query: 613 aggcttgagaaagatatcaggttcagctatttctgggtccgatgtgctaggcttctttct 672
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 aggcttgagaaagatatcaggttcagctatttctgggtccgatgtgctaggcttctttct 278

              
Query: 673 gta 675
           |||
Sbjct: 279 gta 281


>gnl|LJGI|BP075741 similar to UniRef100_O24538 Cluster: Potassium channel; n=1; Vicia
            faba|Rep: Potassium channel - Vicia faba (Broad bean),
            partial (4%)
          Length = 239

 Score =  182 bits (92), Expect = 7e-45
 Identities = 107/112 (95%)
 Strand = Plus / Minus

                                                                        
Query: 2388 aaaatttggatttgatgcaagggatgcaatggtgacaaatgatgaaggagcagaaataga 2447
            |||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||| |||||
Sbjct: 151  aaaatttggatttgatgccagggacgcaatggcgactaatgatgaaggagcagacataga 92

                                                                
Query: 2448 ctgtattgatgtgatcagagataatgataaagtttatatttttgaataggtt 2499
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91   ctgtattgatgtgatcagagataatgataaagtttatatttttgaataggtt 40


>gnl|LJGI|TC75371 
          Length = 518

 Score =  125 bits (63), Expect = 1e-27
 Identities = 63/63 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2437 gcagaaatagactgtattgatgtgatcagagataatgataaagtttatatttttgaatag 2496
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350  gcagaaatagactgtattgatgtgatcagagataatgataaagtttatatttttgaatag 409

               
Query: 2497 gtt 2499
            |||
Sbjct: 410  gtt 412