Miyakogusa Predicted Gene

Lj6g3v2259900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2259900.1 Non Chatacterized Hit- tr|A9PJV9|A9PJV9_9ROSI
Putative uncharacterized protein OS=Populus
trichocarp,45.08,0.00000000000002,coiled-coil,NULL;
seg,NULL,CUFF.61000.1
         (351 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62766 weakly similar to UniRef100_A2Q480 Cluster: Emr...   696   0.0  

>gnl|LJGI|TC62766 weakly similar to UniRef100_A2Q480 Cluster: Emr1, related; n=1;
           Medicago truncatula|Rep: Emr1, related - Medicago
           truncatula (Barrel medic), partial (14%)
          Length = 679

 Score =  696 bits (351), Expect = 0.0
 Identities = 351/351 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacgcccaggagaaatttttcctggatcaaattcaaatcattcagcaagctagaaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 atggacgcccaggagaaatttttcctggatcaaattcaaatcattcagcaagctagaaag 185

                                                                       
Query: 61  gcaaaggaagaggagtttgagaaattgcaggaggcacaacttgaagaaggaaattgggtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gcaaaggaagaggagtttgagaaattgcaggaggcacaacttgaagaaggaaattgggtt 245

                                                                       
Query: 121 tatggagactcttctgagaaagaggaagacaagaaaatcatggagatgagggaattcgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tatggagactcttctgagaaagaggaagacaagaaaatcatggagatgagggaattcgag 305

                                                                       
Query: 181 gaagggagatttaatgtaataaaaattcatgatgataagaagaaggccctgcagaagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gaagggagatttaatgtaataaaaattcatgatgataagaagaaggccctgcagaagaag 365

                                                                       
Query: 241 cacttgcaggagctgatggaactggagaaggagcttgaaaatgaaatggtgcagctcatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cacttgcaggagctgatggaactggagaaggagcttgaaaatgaaatggtgcagctcatg 425

                                                              
Query: 301 gacaagttctcttctggccagactcaagaagaaagcaatcagaaatgattg 351
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gacaagttctcttctggccagactcaagaagaaagcaatcagaaatgattg 476