Miyakogusa Predicted Gene

Lj6g3v2258860.3
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2258860.3 tr|C1E8U4|C1E8U4_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_59495
,39.29,1e-18,seg,NULL; Acid proteases,Peptidase aspartic; CHLOROPLAST
NUCLEIOD DNA-BINDING-RELATED,NULL; ASPARTYL,CUFF.60996.3
         (945 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS350560                                                     686   0.0  
gnl|LJGI|DC596302                                                     139   4e-32

>gnl|LJGI|FS350560 
          Length = 715

 Score =  686 bits (346), Expect = 0.0
 Identities = 346/346 (100%)
 Strand = Plus / Minus

                                                                       
Query: 600 aattgctcaaataacaattgtaatatcatttaacatcagctacatggatatgaagcctca 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aattgctcaaataacaattgtaatatcatttaacatcagctacatggatatgaagcctca 656

                                                                       
Query: 660 cattacagaattggctgacctcatagctcatgagttagatgttaatacttcgcaggttca 719
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cattacagaattggctgacctcatagctcatgagttagatgttaatacttcgcaggttca 596

                                                                       
Query: 720 cttgatgaatttttcttctcttggaaatggttccctctctagatgggtcattactccaag 779
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cttgatgaatttttcttctcttggaaatggttccctctctagatgggtcattactccaag 536

                                                                       
Query: 780 gccatctgctaatttcttttctaacaccactgctatgagtatgatttcacggatatctga 839
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gccatctgctaatttcttttctaacaccactgctatgagtatgatttcacggatatctga 476

                                                                       
Query: 840 acatcagttgcagcttcctgacaaatttggaagttataacttagttgattggcatgccaa 899
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 acatcagttgcagcttcctgacaaatttggaagttataacttagttgattggcatgccaa 416

                                                         
Query: 900 gccgccatcaaaacggacttggtggcagcaatattttgtggtcgcg 945
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gccgccatcaaaacggacttggtggcagcaatattttgtggtcgcg 370


>gnl|LJGI|DC596302 
          Length = 577

 Score =  139 bits (70), Expect = 4e-32
 Identities = 115/130 (88%)
 Strand = Plus / Plus

                                                                       
Query: 588 aggtgaacttcaaattgctcaaataacaattgtaatatcatttaacatcagctacatgga 647
           |||||||||  ||||||| ||||||||||||| |||||||||||||||||| ||  ||||
Sbjct: 12  aggtgaactcaaaattgcacaaataacaattgcaatatcatttaacatcagttatgtgga 71

                                                                       
Query: 648 tatgaagcctcacattacagaattggctgacctcatagctcatgagttagatgttaatac 707
           ||||||||||||||| |||||||||||||   | || || ||||||||||||||||||||
Sbjct: 72  tatgaagcctcacatcacagaattggctggattgatggcacatgagttagatgttaatac 131

                     
Query: 708 ttcgcaggtt 717
           ||| ||||||
Sbjct: 132 ttcccaggtt 141