Miyakogusa Predicted Gene

Lj6g3v2257810.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2257810.1 tr|B9GZQ9|B9GZQ9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_712240 PE=4
SV=1,56.84,2e-18,SUBFAMILY NOT NAMED,NULL; PYM PROTEIN,NULL;
Mago-bind,Exon junction complex, Pym; Pym (Within the bg,CUFF.60934.1
         (654 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW608814 similar to UniRef100_A2Q490 Cluster: ENSANGP00...   876   0.0  
gnl|LJGI|BP044815 similar to UniRef100_A2Q490 Cluster: ENSANGP00...   442   e-123

>gnl|LJGI|BW608814 similar to UniRef100_A2Q490 Cluster: ENSANGP00000004563 , related;
           n=1; Medicago truncatula|Rep: ENSANGP00000004563 ,
           related - Medicago truncatula (Barrel medic), partial
           (42%)
          Length = 482

 Score =  876 bits (442), Expect = 0.0
 Identities = 442/442 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgtgtagtggcagcgaagatcaagcatcagatcagctcagcaaaaccctaaaacaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 41  atggcgtgtagtggcagcgaagatcaagcatcagatcagctcagcaaaaccctaaaacaa 100

                                                                       
Query: 61  ggcgaacggatcctcgctccgacccgccgacccgacggaaccctccgcaagcctattcgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 ggcgaacggatcctcgctccgacccgccgacccgacggaaccctccgcaagcctattcgc 160

                                                                       
Query: 121 atcagagccggctatgtccctcaagaagaagtcgctatttatcatcccaaacctgccctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 atcagagccggctatgtccctcaagaagaagtcgctatttatcatcccaaacctgccctc 220

                                                                       
Query: 181 gagtttaagaaggagatggcctcacattctggacctccaggttatgaccctgaattggaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 gagtttaagaaggagatggcctcacattctggacctccaggttatgaccctgaattggaa 280

                                                                       
Query: 241 ccaaaaccaaggaccaaagcaggcaagaggaatgaaagaaagaaggaaaaacggcttcag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ccaaaaccaaggaccaaagcaggcaagaggaatgaaagaaagaaggaaaaacggcttcag 340

                                                                       
Query: 301 gctgcccttgataaggactcaaatgtagctcaagatagtggcgagcaagaaacattagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gctgcccttgataaggactcaaatgtagctcaagatagtggcgagcaagaaacattagca 400

                                                                       
Query: 361 accgttgagaattcaagtcattcatcagagcctgtccattcattaacaactcagatgaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 accgttgagaattcaagtcattcatcagagcctgtccattcattaacaactcagatgaat 460

                                 
Query: 421 gagctagctgtttctggagatt 442
           ||||||||||||||||||||||
Sbjct: 461 gagctagctgtttctggagatt 482


>gnl|LJGI|BP044815 similar to UniRef100_A2Q490 Cluster: ENSANGP00000004563 , related;
           n=1; Medicago truncatula|Rep: ENSANGP00000004563 ,
           related - Medicago truncatula (Barrel medic), partial
           (28%)
          Length = 587

 Score =  442 bits (223), Expect = e-123
 Identities = 223/223 (100%)
 Strand = Plus / Minus

                                                                       
Query: 432 ttctggagattcctccattgttactcctgccgccaattctgttgacggttctgagtcagg 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ttctggagattcctccattgttactcctgccgccaattctgttgacggttctgagtcagg 528

                                                                       
Query: 492 tcaagatatagagaaaagaattcgagcgctgaaaaagaagatacggcttacagaagccct 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tcaagatatagagaaaagaattcgagcgctgaaaaagaagatacggcttacagaagccct 468

                                                                       
Query: 552 acaacagaaaagtgcagagcaagatttgaagccagagcaattagagaagctagcaaaact 611
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 acaacagaaaagtgcagagcaagatttgaagccagagcaattagagaagctagcaaaact 408

                                                      
Query: 612 ggatgattggcgtaaggagctaaaacagttggaggataaatag 654
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggatgattggcgtaaggagctaaaacagttggaggataaatag 365