Miyakogusa Predicted Gene

Lj6g3v2222110.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj6g3v2222110.1 Non Chatacterized Hit- tr|I1IAC3|I1IAC3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,68.12,2e-19,UCR_hinge,Ubiquinol-cytochrome C reductase hinge
domain; Non-heme 11 kDa protein of cytochrome bc1 c,CUFF.60919.1
         (210 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68289 similar to UniRef100_Q0IUE3 Cluster: Os11g01622...   416   e-116

>gnl|LJGI|TC68289 similar to UniRef100_Q0IUE3 Cluster: Os11g0162200 protein; n=1;
           Oryza sativa Japonica Group|Rep: Os11g0162200 protein -
           Oryza sativa subsp. japonica (Rice), complete
          Length = 551

 Score =  416 bits (210), Expect = e-116
 Identities = 210/210 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctgacgaggaacctgttgatccaaagggatatcttgaagagtcttgcaagccaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  atggctgacgaggaacctgttgatccaaagggatatcttgaagagtcttgcaagccaaaa 134

                                                                       
Query: 61  tgtgtaaaacctttacttgaatatcaggcatgtgttaaaaggatacatggtgatgaaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 tgtgtaaaacctttacttgaatatcaggcatgtgttaaaaggatacatggtgatgaaact 194

                                                                       
Query: 121 gggcagaaacactgcactggacaatattttgattattgggcttgtgttgacaaatgtgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gggcagaaacactgcactggacaatattttgattattgggcttgtgttgacaaatgtgtc 254

                                         
Query: 181 gcaccaaagctattcaccaaactcaagtaa 210
           ||||||||||||||||||||||||||||||
Sbjct: 255 gcaccaaagctattcaccaaactcaagtaa 284