Miyakogusa Predicted Gene
- Lj6g3v2222030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2222030.1 tr|B9I204|B9I204_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_772475 PE=4
SV=1,27.85,0.00000000000002,coiled-coil,NULL; seg,NULL,CUFF.60896.1
(1263 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS342381 similar to UniRef100_A9BQU9 Cluster: Ribonucle... 1138 0.0
gnl|LJGI|BI420202 611 e-174
>gnl|LJGI|FS342381 similar to UniRef100_A9BQU9 Cluster: Ribonuclease BN; n=1; Delftia
acidovorans SPH-1|Rep: Ribonuclease BN - Delftia
acidovorans SPH-1, partial (5%)
Length = 696
Score = 1138 bits (574), Expect = 0.0
Identities = 574/574 (100%)
Strand = Plus / Plus
Query: 1 atggagcttctggagtcggagattcgaatacagccaccgcgacaaacccattcgccttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atggagcttctggagtcggagattcgaatacagccaccgcgacaaacccattcgccttcc 182
Query: 61 gttcctccaccaccgcagaagaaaactagggatttgccgaacctgaacgaatgccatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gttcctccaccaccgcagaagaaaactagggatttgccgaacctgaacgaatgccatgct 242
Query: 121 tgtggcttcaaagctgatgtttgcaccggtaagaacagactccgacccctttatagcgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgtggcttcaaagctgatgtttgcaccggtaagaacagactccgacccctttatagcgaa 302
Query: 181 tggcgtgtagttcttctctgtaagaagtgttacttttctgttgaatcttcccaaatttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tggcgtgtagttcttctctgtaagaagtgttacttttctgttgaatcttcccaaatttgc 362
Query: 241 tcctattgtttttccggtgcatcgccggagtgttttcgttgcatcaaatgtaagcattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tcctattgtttttccggtgcatcgccggagtgttttcgttgcatcaaatgtaagcattct 422
Query: 301 gtgcatcaaagttgttttcttaagtacaaggatgttgctccatggtcctatgcttgtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gtgcatcaaagttgttttcttaagtacaaggatgttgctccatggtcctatgcttgtttg 482
Query: 361 gggtctgatttttctgtctgtgtggattgttggattccaaaaccggtggcgatttctagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gggtctgatttttctgtctgtgtggattgttggattccaaaaccggtggcgatttctagg 542
Query: 421 agtagaaggagaaggggggtgagtaagagaaaggtgagagttgtagctgagaaggagggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 agtagaaggagaaggggggtgagtaagagaaaggtgagagttgtagctgagaaggagggg 602
Query: 481 tctagggttttgggggatggaaatttggtgaggccaatggaggatgtggttagagatgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tctagggttttgggggatggaaatttggtgaggccaatggaggatgtggttagagatgcc 662
Query: 541 aagaagaagattgaggccgccgctagggctagag 574
||||||||||||||||||||||||||||||||||
Sbjct: 663 aagaagaagattgaggccgccgctagggctagag 696
>gnl|LJGI|BI420202
Length = 621
Score = 611 bits (308), Expect = e-174
Identities = 368/388 (94%)
Strand = Plus / Plus
Query: 667 ctgaatctgcacaccaagatgggtcctgtgaaagttgttgatggcgcagagttgagtttt 726
|||||||||| ||| ||||| |||||| |||||||||||||| ||||||||| ||||
Sbjct: 234 ctgaatctgcctcccaggatggatcctgttaaagttgttgatggttcagagttgactttt 293
Query: 727 gagttgcattcgaatttgaatggcacgccaaaaattgcaaagagttggtgcttattgaac 786
| |||||| || |||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 294 ggcttgcatccgcatttgaatggcacgccaacaatttcaaagagttggtgcttattgaac 353
Query: 787 agtacttgcttcgatgctccaaagaggtttgcttctggtgttgattcatcattcaagata 846
| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 actggctgctccgatgctccaaagaggtttgcttctggtgttgattcatcattcaagata 413
Query: 847 tcaaactcaaggaatgtcggtggttgtgatgatatgcatgaagtattcaatgatattaag 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tcaaactcaaggaatgtcggtggttgtgatgatatgcatgaagtattcaatgatattaag 473
Query: 907 ctgtataaggactcgcataaatctttacgtgaaccttcagtttctataggatccttggat 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ctgtataaggactcgcataaatctttacgtgaaccttcagtttctataggatccttggat 533
Query: 967 actgattcttcaaatgatctaaattgtctctgcatgggaagaagtgacatgaaaaatagt 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 actgattcttcaaatgatctaaattgtctctgcatgggaagaagtgacatgaaaaatagt 593
Query: 1027 ccaaaagttggtagatgcactgctgcat 1054
||||||||||||||||||||||||||||
Sbjct: 594 ccaaaagttggtagatgcactgctgcat 621
Score = 161 bits (81), Expect = 1e-38
Identities = 147/169 (86%)
Strand = Plus / Plus
Query: 1023 tagtccaaaagttggtagatgcactgctgcattagatgttaaagtgattgcggaagagct 1082
|||| |||||| |||| |||||||||||||||||||||| |||||||||| ||| ||||
Sbjct: 2 tagttcaaaagatggtgaatgcactgctgcattagatgttgaagtgattgctgaaaagct 61
Query: 1083 gttgaagcaaggggaaggaagttgttctaatcggttgataaacttcaatggagaagattg 1142
||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||| | |
Sbjct: 62 gttgaaggaaggggagggaagttgttctggtcggctgataaacttcaatggagaagttag 121
Query: 1143 tggcatggaatgtgatcgcaaactagcagattatgcattccacagggaa 1191
||||||||| ||||||| ||| | ||||| ||| |||||||||||||
Sbjct: 122 tggcatggatcatgatcgccaacaaacagatcatgtattccacagggaa 170