Miyakogusa Predicted Gene
- Lj6g3v2218720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2218720.1 tr|G7INS2|G7INS2_MEDTR RNA export OS=Medicago
truncatula GN=MTR_2g008410 PE=4 SV=1,93.25,0,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; no
description,WD40/YVTN ,NODE_67488_length_1486_cov_30.412518.path2.1
(762 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71932 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 712 0.0
gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 321 4e-87
gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome... 208 4e-53
gnl|LJGI|TC62048 similar to UniRef100_Q38942 Cluster: Rae1-like ... 96 4e-19
gnl|LJGI|BW632626 similar to UniRef100_A7Q6X6 Cluster: Chromosom... 52 5e-06
>gnl|LJGI|TC71932 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 755
Score = 712 bits (359), Expect = 0.0
Identities = 359/359 (100%)
Strand = Plus / Plus
Query: 1 atgtggcctctcttgtctggaggacaaccgatgactgtcgccatgcacgatgcacccgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atgtggcctctcttgtctggaggacaaccgatgactgtcgccatgcacgatgcacccgtt 456
Query: 61 aaagacattgcttggattcctgagatgagccttttagtcacaggaagctgggacaggact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aaagacattgcttggattcctgagatgagccttttagtcacaggaagctgggacaggact 516
Query: 121 atcaagtattgggatactaggcagccaaatccagtgcatacacaacaactcccagagcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atcaagtattgggatactaggcagccaaatccagtgcatacacaacaactcccagagcgc 576
Query: 181 tgctatgcaatgtcagttaaacatcctctgatggttgttggcacagctgatagaaatatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tgctatgcaatgtcagttaaacatcctctgatggttgttggcacagctgatagaaatatc 636
Query: 241 ttggtctacaacttgcaaaatcctcaggttgaattcaagagaatcatttcacctttaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ttggtctacaacttgcaaaatcctcaggttgaattcaagagaatcatttcacctttaaag 696
Query: 301 tatcagacaaggtgtctcgctgcattccctgaccaacaaggtttcttggttggatcaat 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 tatcagacaaggtgtctcgctgcattccctgaccaacaaggtttcttggttggatcaat 755
>gnl|LJGI|TC59341 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (96%)
Length = 1439
Score = 321 bits (162), Expect = 4e-87
Identities = 582/722 (80%)
Strand = Plus / Plus
Query: 1 atgtggcctctcttgtctggaggacaaccgatgactgtcgccatgcacgatgcacccgtt 60
|||||||| || ||||| || ||||||||||||||||| || ||||| ||||| ||| ||
Sbjct: 367 atgtggccgcttttgtccggtggacaaccgatgactgttgctatgcatgatgctcccatt 426
Query: 61 aaagacattgcttggattcctgagatgagccttttagtcacaggaagctgggacaggact 120
|| || | || ||||| || ||| ||| |||||||| ||||||||| ||||||| ||
Sbjct: 427 aaggatctcgcgtggataccggagttgaaccttttagccacaggaagttgggacaaaacc 486
Query: 121 atcaagtattgggatactaggcagccaaatccagtgcatacacaacaactcccagagcgc 180
| ||||||||||||||||||||| | ||||||||||| || ||||||||||| || ||
Sbjct: 487 ctgaagtattgggatactaggcagtccaatccagtgcacactcaacaactccctgatcgt 546
Query: 181 tgctatgcaatgtcagttaaacatcctctgatggttgttggcacagctgatagaaatatc 240
|| |||||||| ||||| |||||||||||||||||||| | || || ||||||||| |
Sbjct: 547 tgttatgcaatttcagtgaaacatcctctgatggttgtggcaactgccgatagaaatctt 606
Query: 241 ttggtctacaacttgcaaaatcctcaggttgaattcaagagaatcatttcacctttaaag 300
| |||| ||||||||| ||||||||| ||| | ||| |||||| || || | |||
Sbjct: 607 attgtcttcaacttgcagaatcctcagactgagtacaaaagaatcgcatctcccctgaag 666
Query: 301 tatcagacaaggtgtctcgctgcattccctgaccaacaaggtttcttggttggatcaata 360
||||||||||| ||| | ||||| || | ||||| ||||| || |||||||| ||||||
Sbjct: 667 tatcagacaagatgtgttgctgcctttcaagaccagcaaggatttttggttggctcaata 726
Query: 361 gaaggaagagttggggtacatcatttggatgatagtcagcagggtaaaaatttcactttt 420
|||||||| ||||| |||||||| |||||||| | || || || ||||| ||||||
Sbjct: 727 gaaggaagggttggagtacatcacctggatgatggacaacaaaacaagaattttactttt 786
Query: 421 aaatgccacagagaggggaatgaaatatattcagtcaactctttaaacttccatcctgta 480
|||||||| ||||| ||||| ||||| || || ||||| ||||| |||||||| |||
Sbjct: 787 aaatgccatagagaaaataatgacatatactctgtgaactccttaaatttccatccggta 846
Query: 481 caccacacctttgcaactgctggttctgatggtgcttttaatttttgggacaaagatagt 540
| ||||| |||||||||||||| ||||||||||||| |||||| ||||| || || |||
Sbjct: 847 tatcacacttttgcaactgctggatctgatggtgcttataatttctgggataaggacagt 906
Query: 541 aaacagaggcttaaggccatgttaagatgcagccaacctattccttgcagtgcattcaac 600
|||||||| || ||||| ||| ||| || | || || || |||||||||||||||||
Sbjct: 907 aaacagagactcaaggctatggcaaggtgtaatcagcccataccttgcagtgcattcaat 966
Query: 601 aatgatggctcaatatttgcttactcagtctgctatgactggagtaaaggggcagaaaat 660
| |||||| || |||| |||||| | || || ||||| ||||| ||||| |||||||||
Sbjct: 967 agtgatggttccatatatgcttatgcggtttgttatgattggagcaaaggagcagaaaat 1026
Query: 661 cataatcccacaacagcaaaaaccaacatttacctgcacttgccacaggagtctgaggtt 720
|| ||||| || |||||||| | |||||||| ||||||| || ||||| ||||||||
Sbjct: 1027 cacaatccaactacagcaaagagcaacatttttttgcacttacctcaggaaactgaggtt 1086
Query: 721 aa 722
||
Sbjct: 1087 aa 1088
>gnl|LJGI|TC61577 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 827
Score = 208 bits (105), Expect = 4e-53
Identities = 321/393 (81%)
Strand = Plus / Plus
Query: 1 atgtggcctctcttgtctggaggacaaccgatgactgtcgccatgcacgatgcacccgtt 60
|||||||| || ||||| || |||||||| ||||||| |||||||| ||||| || ||
Sbjct: 411 atgtggccgcttttgtcgggtggacaaccagtgactgttgccatgcatgatgctcctatt 470
Query: 61 aaagacattgcttggattcctgagatgagccttttagtcacaggaagctgggacaggact 120
||||| |||| ||||| || || || |||||||||| ||| ||||| ||||||| ||
Sbjct: 471 aaagatcttgcgtggataccggaaattagccttttagccaccggaagttgggacaaaacc 530
Query: 121 atcaagtattgggatactaggcagccaaatccagtgcatacacaacaactcccagagcgc 180
| ||||||||||||||||||||| | ||||||||||| || ||||||||||| || |||
Sbjct: 531 gtgaagtattgggatactaggcagtccaatccagtgcacactcaacaactccctgatcgc 590
Query: 181 tgctatgcaatgtcagttaaacatcctctgatggttgttggcacagctgatagaaatatc 240
|| |||||||| ||||| || ||||||||||||||||| || || |||||||||||| |
Sbjct: 591 tgttatgcaatttcagtgaagcatcctctgatggttgtggggactgctgatagaaatctt 650
Query: 241 ttggtctacaacttgcaaaatcctcaggttgaattcaagagaatcatttcacctttaaag 300
| |||| ||||||||| ||||||||| ||| | ||| ||||| | || || | |||
Sbjct: 651 gttgtcttcaacttgcagaatcctcagactgagtacaaaagaattgtatctcccctgaag 710
Query: 301 tatcagacaaggtgtctcgctgcattccctgaccaacaaggtttcttggttggatcaata 360
||||||||||| ||| | ||||| || || || || |||||||| ||||||| ||||||
Sbjct: 711 tatcagacaagatgtgttgctgcttttccagatcagcaaggttttctggttggttcaata 770
Query: 361 gaaggaagagttggggtacatcatttggatgat 393
|||||||| ||||| |||||||| ||||||||
Sbjct: 771 gaaggaagggttggagtacatcacctggatgat 803
>gnl|LJGI|TC62048 similar to UniRef100_Q38942 Cluster: Rae1-like protein At1g80670;
n=2; Arabidopsis thaliana|Rep: Rae1-like protein
At1g80670 - Arabidopsis thaliana (Mouse-ear cress),
partial (19%)
Length = 745
Score = 95.6 bits (48), Expect = 4e-19
Identities = 117/140 (83%)
Strand = Plus / Plus
Query: 583 ccttgcagtgcattcaacaatgatggctcaatatttgcttactcagtctgctatgactgg 642
||||||||||||||||| |||||||| || |||| |||||| | || || ||||| |||
Sbjct: 23 ccttgcagtgcattcaataatgatggttccatatatgcttatgcggtttgttatgattgg 82
Query: 643 agtaaaggggcagaaaatcataatcccacaacagcaaaaaccaacatttacctgcacttg 702
|| ||||| ||||||||||| ||||| | |||||||| |||||||||| |||||||
Sbjct: 83 agcaaaggagcagaaaatcacaatccagctacagcaaagaccaacatttttttgcactta 142
Query: 703 ccacaggagtctgaggttaa 722
|| ||||| |||||||||||
Sbjct: 143 cctcaggaatctgaggttaa 162
>gnl|LJGI|BW632626 similar to UniRef100_A7Q6X6 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 476
Score = 52.0 bits (26), Expect = 5e-06
Identities = 53/62 (85%)
Strand = Plus / Plus
Query: 1 atgtggcctctcttgtctggaggacaaccgatgactgtcgccatgcacgatgcacccgtt 60
|||||||| || ||||| || ||||||||||||||||| || ||||| ||||| ||| ||
Sbjct: 397 atgtggccgcttttgtccggtggacaaccgatgactgttgctatgcatgatgctcccatt 456
Query: 61 aa 62
||
Sbjct: 457 aa 458