Miyakogusa Predicted Gene
- Lj6g3v2218700.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2218700.1 Non Chatacterized Hit- tr|B8AEB3|B8AEB3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,55.26,0.000000000000002,seg,NULL; A Receptor for Ubiquitination
Targets,F-box domain, cyclin-like; no description,Kelch
repe,NODE_50000_length_1708_cov_40.658665.path2.1
(1394 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS357537 weakly similar to UniRef100_A7Q6X7 Cluster: Ch... 319 3e-86
gnl|LJGI|FS331388 similar to UniRef100_A7Q6X7 Cluster: Chromosom... 202 4e-51
gnl|LJGI|DC593780 similar to UniRef100_A7Q6X7 Cluster: Chromosom... 90 4e-17
gnl|LJGI|TC61484 similar to UniRef100_A7NV34 Cluster: Chromosome... 62 1e-08
gnl|LJGI|BP058913 58 2e-07
>gnl|LJGI|FS357537 weakly similar to UniRef100_A7Q6X7 Cluster: Chromosome chr12
scaffold_57, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_57, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (37%)
Length = 570
Score = 319 bits (161), Expect = 3e-86
Identities = 313/363 (86%), Gaps = 3/363 (0%)
Strand = Plus / Minus
Query: 946 gttgatgttgggggagaagtttatgatccagatgtgaattcatggcttgaaatgccagtt 1005
||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 478 gttgatgctggtggagaagtttatgatccaaatgtgaattcatggcttgaaatgccaatt 419
Query: 1006 ggaatgggtttaggctggcctgcaaggcaagctggaacaaaattgagtgttactgtcaat 1065
|| ||| || ||| |||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 418 ggcatgagtgaaggttggcctgcaaggcaagctggaacaaaattgtgtgttgctgtcaat 359
Query: 1066 aatgatctatatgcactagatccttcaagttctcttga---cactgcaaagatcaaggta 1122
||| ||| ||||| || ||||||||| ||||||||| ||||||||||||||||||
Sbjct: 358 gatgttctgtatgctcttgatccttcagattctcttgacagcactgcaaagatcaaggtg 299
Query: 1123 tatgatgatgaaggtgatacttggaaagttgttgcaggagatgttcctattcatgatttc 1182
|||||| |||||||||| |||||||||||| |||||| |||||||||||||||||||
Sbjct: 298 tatgattttgaaggtgatgcttggaaagttgctgcaggggatgttcctattcatgattca 239
Query: 1183 actgattcaaaatccccttatcttttagctagtttacttggaaaacttcatgtgataact 1242
||||| | |||| ||||||||||| ||| || ||||||||||||||||||||||||||
Sbjct: 238 gctgatctagaatctccttatcttttggctggtctacttggaaaacttcatgtgataact 179
Query: 1243 aaagatgccaatcacaacatcacagtgttgcagtctgacatgcaaaatgatttagcttcc 1302
| ||||| |||| ||||| |||||||||| |||||||||||||| ||| |||| |
Sbjct: 178 acagatggtgatcataacattgtagtgttgcagggtgacatgcaaaatggtttggctttc 119
Query: 1303 tcc 1305
|||
Sbjct: 118 tcc 116
>gnl|LJGI|FS331388 similar to UniRef100_A7Q6X7 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 798
Score = 202 bits (102), Expect = 4e-51
Identities = 389/485 (80%), Gaps = 6/485 (1%)
Strand = Plus / Plus
Query: 146 atgagctatcacttcagattctagctagagttcctcgcatttgttacttgaatctcaagt 205
||||| ||||| |||||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct: 316 atgaggtatcaactcagattctagctagagttcctcgaatttattacttgaatctgaagt 375
Query: 206 cagtttctcgtccttggaaggcggccgttatgagttctgaactgttttctgtgaggaaag 265
||||| || ||||||||| || || || ||||||||| ||| |||||| ||||
Sbjct: 376 tagtttgccgcacttggaaggaagctcttgagaattctgaactatttcatgtgagaaaag 435
Query: 266 aacttggaactatggaggagtggctctatgtactaactaaggtcggcgatgataagcttt 325
| |||||||| | ||||| ||||| || ||||||| |||||| ||||| |||||||
Sbjct: 436 agcttggaaccacagaggaatggctttacatactaacaaaggtcaaggatgacaagcttt 495
Query: 326 tatggtatgctttggaccctcgttccagaagatggcagaggttaccattaatgccaaatg 385
||||| |||| || ||||||| ||||||||||||||| | ||| ||| ||||||||| |
Sbjct: 496 tatggcatgccttagaccctctttccagaagatggcaaaagttgccaccaatgccaaaag 555
Query: 386 ttagttttgaagatgaaacaaaaaaggatttggctgcgtttcctcttcgtatttggaaca 445
|| | |||||| ||||| |||| ||| | || || | ||||| ||| |||| ||
Sbjct: 556 ttggctttgaaaatgaatcaaagcagggtgtgtcttcctttcccctt------tggagca 609
Query: 446 tgttgggttcaagtatcagaattgctgatgccatgataagctggcttaggagaagagatg 505
|| || ||||||| ||||||||||||||| || || |||||||| | | || || |
Sbjct: 610 tggtgagttcaagcatcagaattgctgatattataatgagctggctcggccggagggacg 669
Query: 506 ccttggatcggatgtcatttggcggttgctccattggggctgttgatggttgcatctttg 565
| |||| |||||| ||||| |||||||||| ||||| ||||||||||||||||||| ||
Sbjct: 670 cgctggaccggatgccattttgcggttgctcaattggagctgttgatggttgcatctatg 729
Query: 566 ctttaggaggattctctaaagcttcagctatgaaatctgtttggcggtatgatcctgtta 625
| |||||||||| || | ||||||||| |||||||||||||||| ||||||||| || |
Sbjct: 730 cagtaggaggattttcaagagcttcagcaatgaaatctgtttggcagtatgatccagtga 789
Query: 626 aaaac 630
|||||
Sbjct: 790 aaaac 794
>gnl|LJGI|DC593780 similar to UniRef100_A7Q6X7 Cluster: Chromosome chr12 scaffold_57,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_57, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 582
Score = 89.7 bits (45), Expect = 4e-17
Identities = 96/113 (84%)
Strand = Plus / Minus
Query: 1193 aatccccttatcttttagctagtttacttggaaaacttcatgtgataactaaagatgcca 1252
|||| ||||||||||| ||| || ||||||||||||||||||||||||||| |||||
Sbjct: 574 aatctccttatcttttggctggtctacttggaaaacttcatgtgataactacagatggtg 515
Query: 1253 atcacaacatcacagtgttgcagtctgacatgcaaaatgatttagcttcctcc 1305
|||| ||||| |||||||||| |||||||||||||| ||| |||| ||||
Sbjct: 514 atcataacattgtagtgttgcagggtgacatgcaaaatggtttggctttctcc 462
>gnl|LJGI|TC61484 similar to UniRef100_A7NV34 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 928
Score = 61.9 bits (31), Expect = 1e-08
Identities = 91/111 (81%)
Strand = Plus / Plus
Query: 946 gttgatgttgggggagaagtttatgatccagatgtgaattcatggcttgaaatgccagtt 1005
|||||||||||||| ||| | |||||||| || || |||||| | ||||||||| |
Sbjct: 88 gttgatgttgggggtgaaatctatgatcctgaaacaaactcatgggtagaaatgccaaat 147
Query: 1006 ggaatgggtttaggctggcctgcaaggcaagctggaacaaaattgagtgtt 1056
|||||||| || ||||||||||||||||| || |||||||||||||||
Sbjct: 148 ggaatgggagagggttggcctgcaaggcaagcaggtacaaaattgagtgtt 198
>gnl|LJGI|BP058913
Length = 102
Score = 58.0 bits (29), Expect = 2e-07
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 795 atggtcccaattaccaagcatgccttttgcaaatgctcagg 835
||||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 52 atggtcccaattacctagcatgcctttggcaaaagctcagg 92