Miyakogusa Predicted Gene
- Lj6g3v2218370.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2218370.1 Non Chatacterized Hit- tr|E5GCK1|E5GCK1_CUCME
Putative uncharacterized protein OS=Cucumis melo subsp,44.95,3e-18,
,CUFF.60849.1
(1191 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO037941 similar to UniRef100_A7QGP4 Cluster: Chromosom... 1170 0.0
gnl|LJGI|CB829639 similar to UniRef100_A9RRS5 Cluster: Predicted... 1005 0.0
gnl|LJGI|TC71390 homologue to UniRef100_A7QGP4 Cluster: Chromoso... 652 0.0
gnl|LJGI|FS347737 similar to UniRef100_A7QGP4 Cluster: Chromosom... 56 5e-07
>gnl|LJGI|GO037941 similar to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 890
Score = 1170 bits (590), Expect = 0.0
Identities = 607/610 (99%), Gaps = 2/610 (0%)
Strand = Plus / Minus
Query: 582 gagaggcaagttgtatcatagccatgatggacacctgttaaataggagttttgaaaatat 641
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 890 gagaggcaagt-gtatcatagccatgatggacac-tgttaaataggagttttgaaaatat 833
Query: 642 ggcaaatgaaattccatttcccagtccaggttcaggtaagcaggtagctcatcagtttga 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 ggcaaatgaaattccatttcccagtccaggttcaggtaagcaggtagctcatcagtttga 773
Query: 702 aaatgaaaatgaaggtcatagtgaagttcagggagttagccttggattttcaccagaaat 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 aaatgaaaatgaaggtcatagtgaagttcagggagttagccttggattttcaccagaaat 713
Query: 762 ggactcatcaactgtgcaggaaagctcacccatgagctcttctctggaccgaacctcgct 821
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 712 ggactcatcaactgtgcaggaaagctcacccatgaactcttctctggaccgaacctcgct 653
Query: 822 agaagcaactagcttttcccacttgcaacaggcattggatcagttggatattagaaccaa 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agaagcaactagcttttcccacttgcaacaggcattggatcagttggatattagaaccaa 593
Query: 882 actgtgcataagggacagtctataccgcttggctaagagtgcggagcaaagacatgataa 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 actgtgcataagggacagtctataccgcttggctaagagtgcggagcaaagacatgataa 533
Query: 942 tgtaaacacaaatggctacataggagatgatagtgaagcgtgtcaagcaatgtcggtaca 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgtaaacacaaatggctacataggagatgatagtgaagcgtgtcaagcaatgtcggtaca 473
Query: 1002 ggatccgagcaggtgtacagggttcatggatatagaaattgacacaaatcctattgatcg 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ggatccgagcaggtgtacagggttcatggatatagaaattgacacaaatcctattgatcg 413
Query: 1062 gtctatagcacatttgctatttcacaggccttcagagccatcaacgttgcttcctaacca 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gtctatagcacatttgctatttcacaggccttcagagccatcaacgttgcttcctaacca 353
Query: 1122 tacagtaccttccaaatccagtgcccaagatacatggatcagtgatcaatccaccagtaa 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tacagtaccttccaaatccagtgcccaagatacatggatcagtgatcaatccaccagtaa 293
Query: 1182 agactgagaa 1191
||||||||||
Sbjct: 292 agactgagaa 283
>gnl|LJGI|CB829639 similar to UniRef100_A9RRS5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein -, partial (4%)
Length = 532
Score = 1005 bits (507), Expect = 0.0
Identities = 524/532 (98%)
Strand = Plus / Plus
Query: 54 tgaattccttccaatcaatggttccaataaaagatcacctcctgttgatnnnnnnntgag 113
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 tgaattccttctaatcaatggttccaataaaagatcacctcctgttgataaaaaaatgag 60
Query: 114 gtctcaaatggatgttgatgatgatggtgtccctgctccattgtcaatattcggtgaatc 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtctcaaatggatgttgatgatgatggtgtccctgctccattgtcaatattcggtgaatc 120
Query: 174 aggcatgaaatttggtactaaagatgacttggtgcacaaagaaaagttgcagaggaagct 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggcatgaaatttggtactaaagatgacttggtgcacaaagaaaagttgcagaggaagct 180
Query: 234 tccaaagccatcagcaggaaggcgtaaaaatggcttccaagaaaatggagatataaggca 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccaaagccatcagcaggaaggcgtaaaaatggcttccaagaaaatggagatataaggca 240
Query: 294 gccctttggaacctcttccagtggagttacttctcttgatagtatccaagagcatattct 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccctttggaacctcttccagtggagttacttctcttgatagtatccaagagcatattct 300
Query: 354 gaacatagattctgattcctttgactgcatacagacacaaattcctatagaacagccaga 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaacatagattctgattcctttgactgcatacagacacaaattcctatagaacagccaga 360
Query: 414 ctttagtcctactccatatcaaacttccctctttccgactttgtctggaccaagatccaa 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctttagtcctactccatatcaaacttccctctttccgactttgtctggaccaagatccaa 420
Query: 474 gcacgatggacatcctttgtcttctcttaaagaatcatcttatgtgtcaaacctggagag 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gcacgatggacatcctttgtcttctcttaaagaatcatcttatgtgtcaaacctggagag 480
Query: 534 ttctcacagtcattctatggttgctgctgccttgaaaaccaacgggaagaga 585
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttctcacagtcattctatggttgctgctgccttgaaaaccaacgggaagaga 532
>gnl|LJGI|TC71390 homologue to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 718
Score = 652 bits (329), Expect = 0.0
Identities = 329/329 (100%)
Strand = Plus / Plus
Query: 863 agttggatattagaaccaaactgtgcataagggacagtctataccgcttggctaagagtg 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 agttggatattagaaccaaactgtgcataagggacagtctataccgcttggctaagagtg 124
Query: 923 cggagcaaagacatgataatgtaaacacaaatggctacataggagatgatagtgaagcgt 982
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cggagcaaagacatgataatgtaaacacaaatggctacataggagatgatagtgaagcgt 184
Query: 983 gtcaagcaatgtcggtacaggatccgagcaggtgtacagggttcatggatatagaaattg 1042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gtcaagcaatgtcggtacaggatccgagcaggtgtacagggttcatggatatagaaattg 244
Query: 1043 acacaaatcctattgatcggtctatagcacatttgctatttcacaggccttcagagccat 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 acacaaatcctattgatcggtctatagcacatttgctatttcacaggccttcagagccat 304
Query: 1103 caacgttgcttcctaaccatacagtaccttccaaatccagtgcccaagatacatggatca 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 caacgttgcttcctaaccatacagtaccttccaaatccagtgcccaagatacatggatca 364
Query: 1163 gtgatcaatccaccagtaaagactgagaa 1191
|||||||||||||||||||||||||||||
Sbjct: 365 gtgatcaatccaccagtaaagactgagaa 393
>gnl|LJGI|FS347737 similar to UniRef100_A7QGP4 Cluster: Chromosome chr12 scaffold_93,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_93, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 727
Score = 56.0 bits (28), Expect = 5e-07
Identities = 64/76 (84%)
Strand = Plus / Minus
Query: 1036 gaaattgacacaaatcctattgatcggtctatagcacatttgctatttcacaggccttca 1095
|||| ||| |||||||| |||||||||||||| ||||| ||||| || ||||| || |||
Sbjct: 611 gaaactgatacaaatcccattgatcggtctatcgcacacttgctgttccacagaccctca 552
Query: 1096 gagccatcaacgttgc 1111
|| |||||| |||||
Sbjct: 551 gattcatcaatgttgc 536