Miyakogusa Predicted Gene
- Lj6g3v2218360.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj6g3v2218360.1 tr|G7IL78|G7IL78_MEDTR Auxin-induced protein 5NG4
OS=Medicago truncatula GN=MTR_2g007970 PE=4 SV=1,57.23,0,FAMILY NOT
NAMED,NULL; Multidrug resistance efflux transporter EmrE,NULL;
EamA,Drug/metabolite trans,CUFF.60848.1
(1065 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76606 weakly similar to UniRef100_A7QBC8 Cluster: Chr... 870 0.0
gnl|LJGI|TC60577 weakly similar to UniRef100_A7QBC8 Cluster: Chr... 52 7e-06
>gnl|LJGI|TC76606 weakly similar to UniRef100_A7QBC8 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 505
Score = 870 bits (439), Expect = 0.0
Identities = 442/443 (99%)
Strand = Plus / Plus
Query: 1 atggcaggaaccatgaaagcattcttgctcatgtttgtggtgcaagccgcttttgccgga 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atggcatgaaccatgaaagcattcttgctcatgtttgtggtgcaagccgcttttgccgga 122
Query: 61 aacaacattttgtataagattgttatctttgacggaatgccggtcagcatcatcactgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aacaacattttgtataagattgttatctttgacggaatgccggtcagcatcatcactgtt 182
Query: 121 taccgtcaaatcatttcagccgccttcactctatccttagctttcatctttgaacgcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 taccgtcaaatcatttcagccgccttcactctatccttagctttcatctttgaacgcaat 242
Query: 181 aacatgcccaacctcactttcaagctcctctccatctccttcttgaatggattacttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aacatgcccaacctcactttcaagctcctctccatctccttcttgaatggattacttggg 302
Query: 241 ggaagtctgtaccaaaatttatattttgaatcattaagcttaatatcagccaccttcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggaagtctgtaccaaaatttatattttgaatcattaagcttaatatcagccaccttcgtc 362
Query: 301 acggctctgttcaaccttattccggccattacttttgctttggccatcttattcggtttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 acggctctgttcaaccttattccggccattacttttgctttggccatcttattcggtttg 422
Query: 361 gaaactctagattttcatgcgattgcttgcaaagttaaggtgatgggtacagttattgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gaaactctagattttcatgcgattgcttgcaaagttaaggtgatgggtacagttattgga 482
Query: 421 attggaggggctatgtttgtgac 443
|||||||||||||||||||||||
Sbjct: 483 attggaggggctatgtttgtgac 505
>gnl|LJGI|TC60577 weakly similar to UniRef100_A7QBC8 Cluster: Chromosome chr4
scaffold_73, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_73, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 795
Score = 52.0 bits (26), Expect = 7e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 418 ggaattggaggggctatgtttgtgacatttctcaaaagtgtagaactgagcatctggccc 477
|||||||||||||| ||| | |||| ||||||||| |||| ||||| ||||| |||||
Sbjct: 522 ggaattggaggggcaatgatgttgacctttctcaaaggtgtggaacttagcatttggcct 581
Query: 478 ttccacttcaacat 491
||||| |||||||
Sbjct: 582 ttccatatcaacat 595